
Cp4.1LG18g05910 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGAACTAAGTATAAAACCCCAAAAGCCGGGAATTGGTCAAGCCTCAAGCTGCCGGATCCAGTTCGCCTGAACGCTGAAGCTACTTCCCGACTCTGAAGTCGAAATGGCCTACGCCGCGGTATCAAGATCGTCGACGGCTGCCATGACCGTCACATTGGCGTTTGTATCCGCCTCCGCCATCCTATCTCGTAAAACTTCGATAACTTTTAAGATCCTTTATGTCCTCTCTCTCAATTTCTCCGATTTACTACGTGATTCTCACAAGTCGTGTTTTTGTGGGCTTCTCCAGTTTATTTCGTGACGAAGAAGTCGAGAGAGTTGGGTTCCAAAGTCCGAGAGCTTGAGGCTTCTCTGGCAGCTTCTTTAAAGAAAACCATCGCCGAGAGACAAGGCCGAATACGGGCACAGCAGGTGTTTCATATTTGCTCCTCTGCATCGCTTCATGTTCCTGACTCCAATGTTGTTATTGATATTTTGATTTTTTTTTTTTTTTTTCCTTCCTGTTTGTAGGCTTTAAGGAAAGCAGTTTCGGAACCGAAGTCTGATAGCGTGGAGTGTACTTTGTATCCCATGGCACCAATTGGTACTATCCAATCATCCTTCTCTACTAGGTTAGTTTTAGATTGCATATCTGGTAGTCTAAACATCAATTATTGGGTTGTTGTTTTCTCATAGTTCTGTTCACAAAACTAGTTACAGCCGTATTCTTCAGCTAGCGCTGTTGGTTATTTTTTTTTTTTTTTTAAGGAATGGGACTCCGAGGCAATCTTTAGTCGTACCTCTTGCGAGGGCAAGGTTGGTGTTTTCTTCTCGCATTCCTCCAGCGTCCATTGAAGGTCTTGGAGAATATTCCCATTGCTGGGTCATATATGTCTTTCATTTAAACACAAATCTTGACAAGTTGTGGAAGGATCCATCGAAATCAAAATTCAAGGCAAAAGTACGCTTCTTCATTTGTTGATGATCCTTAAATATGGAATTCACATTTCTATTATTCTTATAATTCCCTAAAATCCCATAAAAGGACAGCTCAATGGTAGGTTAAAGTACCGAGGTTGAAAGGCGAAAAAGTAGGAATCTTTGCTACGAGATCCCCACATAGACCATGCCCAATTGGAATCACCATTGCAAAGGTAAGATAACATTTTTGATTGCTGTCAATGTATCTTGCAAGTTGATGGAGAAGGCCATCATTCATCACATTGATGAAAATATGTCCCCCCCCCCCCAAATGAATTCTAGAGAGGTTTCACTGTCACATGAACTGGTCGAATGTGTTTTTGTATGGTTAGGCTGTTTCAGTTTCATTTTGCATTAGAAATTTATGGCTACAAGCTTACAGTTGAAATTGTTAAACAACATTAAAATGCAATAGATAAATGGGGGAATATTAACTCTAAGATTAAAAAATCTGCTGTACCACTTCAGGTGGAGGCTATCCAGGGACATCAAATTCTACTCTCTGGTGCCGATCTTGTTGATGGAACGGTAAGGGTTTGTTTCATTTTTTTCCACCAGCGATAAAGGTGTAATCTTGAATTTAGTCATTACTTCTTGTATTAATGATTGTTTTGATTTCTTGCTTTGTTCGAATTTTGTTACAGCCAGTACTTGATGTTAAACCTTATCTACCGTACTGTGACAGTATCCAAGATGCAACAGTCCCTAAGTGGTTAACGGTACTTCTTTCCTTGATGCTTATGTTACTATTCATCCTTTCAAATCATTCTTTGTGTGTATGTGTTGTGCTTTTCAACTTCAAAATGTGGACAATCTCTTCTCATTTGCGTGCCATATGTGATATAACTAGTTGCGAGCAAATAACTTAAGAAATTCAACTTTCCATATGTTATTTGGTGCTACTGCTACTTTCATTGTTGGAGGCATGATACTCTATAACCATGTAATATGTTTTTATACATTCTTCCTGGCAATCTAACATCTTATTGACGCAAACACAGGGGGAAAATGTATTGTCTGTTGCATCCATTTGCTTCTCTGAGGAATTTACTCCCTCTCTATCGGAGTGTTGGCCACTAATAGTGAGTTCCTTTTTTAAAAATTAATTAATTAATTATTACTGATGTTGTTTTTTTATATAACCACGAGTGTTTGGGCCAACTTGCGCACCTCAACAATATGCCAAAAATATTCACTATTTTTATTTTTATTTTTATTTTTTTTTTTTGCACGTGAGAGGAAAAAAAACAGTATGGTTTCTTTGGTTTCATTGGTATCAAACAAAAGGGACCTTTCAAGCTATTATATTTTATGCCTTAAAAGACGTTACTGGAGTTTTGGGTGATAATCAGCCTGAGGTTGGTGCTTTTGATGCAAAGCTTAATAAAAAAAAAGTGAAAACCCTTGATATCTCCTGGTGGTGTTGTAGCGCACAGAGTCTGAATTCCTTAAGAAAACTATGCCTCTGGAAATTTACATTATGAATATTGAGAGAGAGATAGCTGCTTTGTAGTCTGATTACCATTTTTATGAAGCTCCACCTTACAAAGAGCTAGTGCTCACAAGTGCTCATAATTTCTCATGTATCATAATTTTCTTGTTTCAGGAAAAGAAATCGCTTTATGCATCGGCAGATGAGTTGAAAAACTTTGTGAAGCAGGTGCTTTCATGGGATATTCGATCATTGTCACAACGTAGCCAACCTCATGAATCCTACCTTACGACTACAAGAGGACATGAGTTGTCCGATGCTAGTTCAGATTCAGATGGTCACCTAGATGAAACACTTCCTAGTGGAACTTCCCAAAGTTCTTCTAAGAGCGTTGTCTATCACCTACTTGTAGATGGATTAAATGTGTCGTACACAATCGGTTGCCAAGGCGACGTGGTTGTGAGAAAAGTGGAACTTGCATCACCCAGCTGAATAGGCAAATAAGGGTAACTTGTCTTTTTACTATGTAGGGAATTCTCACTCAAAACTAAACTGCCTTGTATGGAGCTCGATCTCCTTACATTTCTTATTCATCTTTCTCTTCACAAAAGGTGTATGGTTGAAATTGAGACAAGCATGCTGGATAGAATCTTAATTGTGAGTTGTTAGATGGTCAGTGAAATAGTTTTGGTTGAAAATGTGTGGCTATCTGCTGATGAGTGATTGTTTGACTTTTGTACCACATTCTTAAAGAAGAAAGGGAAATGTTTTGAAGTCTATACTCCAGAAGTATGAACTGTTACCACAAGTGACTAAGTCACATCGAGCTGAACTGATGCAGCTTGGATCAACTAAGATGAAAACAAAGGATCTTTTGGACGTGGTTCCAGTTCACATGAGGCATTAATCCATGGTTTGGTTTGGGCTTTGTTGGTTTTTATTTTTCATTTTTGAAGCATAT AAGAACTAAGTATAAAACCCCAAAAGCCGGGAATTGGTCAAGCCTCAAGCTGCCGGATCCAGTTCGCCTGAACGCTGAAGCTACTTCCCGACTCTGAAGTCGAAATGGCCTACGCCGCGGTATCAAGATCGTCGACGGCTGCCATGACCGTCACATTGGCGTTTGTATCCGCCTCCGCCATCCTATCTCTTTATTTCGTGACGAAGAAGTCGAGAGAGTTGGGTTCCAAAGTCCGAGAGCTTGAGGCTTCTCTGGCAGCTTCTTTAAAGAAAACCATCGCCGAGAGACAAGGCCGAATACGGGCACAGCAGGCTTTAAGGAAAGCAGTTTCGGAACCGAAGTCTGATAGCGTGGAGTGTACTTTGTATCCCATGGCACCAATTGGTACTATCCAATCATCCTTCTCTACTAGGAATGGGACTCCGAGGCAATCTTTAGTCGTACCTCTTGCGAGGGCAAGGTTGGTGTTTTCTTCTCGCATTCCTCCAGCGTCCATTGAAGGTCTTGGAGAATATTCCCATTGCTGGGTCATATATGTCTTTCATTTAAACACAAATCTTGACAAGTTGTGGAAGGATCCATCGAAATCAAAATTCAAGGCAAAAGTTAAAGTACCGAGGTTGAAAGGCGAAAAAGTAGGAATCTTTGCTACGAGATCCCCACATAGACCATGCCCAATTGGAATCACCATTGCAAAGGTGGAGGCTATCCAGGGACATCAAATTCTACTCTCTGGTGCCGATCTTGTTGATGGAACGCCAGTACTTGATGTTAAACCTTATCTACCGTACTGTGACAGTATCCAAGATGCAACAGTCCCTAAGTGGTTAACGGGGGAAAATGTATTGTCTGTTGCATCCATTTGCTTCTCTGAGGAATTTACTCCCTCTCTATCGGAGTGTTGGCCACTAATAGAAAAGAAATCGCTTTATGCATCGGCAGATGAGTTGAAAAACTTTGTGAAGCAGGTGCTTTCATGGGATATTCGATCATTGTCACAACGTAGCCAACCTCATGAATCCTACCTTACGACTACAAGAGGACATGAGTTGTCCGATGCTAGTTCAGATTCAGATGGTCACCTAGATGAAACACTTCCTAGTGGAACTTCCCAAAGTTCTTCTAAGAGCGTTGTCTATCACCTACTTGTAGATGGATTAAATGTGTCGTACACAATCGGTTGCCAAGGCGACGTGGTTGTGAGAAAAGTGGAACTTGCATCACCCAGCTGAATAGGCAAATAAGGGTAACTTGTCTTTTTACTATGTAGGGAATTCTCACTCAAAACTAAACTGCCTTGTATGGAGCTCGATCTCCTTACATTTCTTATTCATCTTTCTCTTCACAAAAGGTGTATGGTTGAAATTGAGACAAGCATGCTGGATAGAATCTTAATTGTGAGTTGTTAGATGGTCAGTGAAATAGTTTTGGTTGAAAATGTGTGGCTATCTGCTGATGAGTGATTGTTTGACTTTTGTACCACATTCTTAAAGAAGAAAGGGAAATGTTTTGAAGTCTATACTCCAGAAGTATGAACTGTTACCACAAGTGACTAAGTCACATCGAGCTGAACTGATGCAGCTTGGATCAACTAAGATGAAAACAAAGGATCTTTTGGACGTGGTTCCAGTTCACATGAGGCATTAATCCATGGTTTGGTTTGGGCTTTGTTGGTTTTTATTTTTCATTTTTGAAGCATAT ATGGCCTACGCCGCGGTATCAAGATCGTCGACGGCTGCCATGACCGTCACATTGGCGTTTGTATCCGCCTCCGCCATCCTATCTCTTTATTTCGTGACGAAGAAGTCGAGAGAGTTGGGTTCCAAAGTCCGAGAGCTTGAGGCTTCTCTGGCAGCTTCTTTAAAGAAAACCATCGCCGAGAGACAAGGCCGAATACGGGCACAGCAGGCTTTAAGGAAAGCAGTTTCGGAACCGAAGTCTGATAGCGTGGAGTGTACTTTGTATCCCATGGCACCAATTGGTACTATCCAATCATCCTTCTCTACTAGGAATGGGACTCCGAGGCAATCTTTAGTCGTACCTCTTGCGAGGGCAAGGTTGGTGTTTTCTTCTCGCATTCCTCCAGCGTCCATTGAAGGTCTTGGAGAATATTCCCATTGCTGGGTCATATATGTCTTTCATTTAAACACAAATCTTGACAAGTTGTGGAAGGATCCATCGAAATCAAAATTCAAGGCAAAAGTTAAAGTACCGAGGTTGAAAGGCGAAAAAGTAGGAATCTTTGCTACGAGATCCCCACATAGACCATGCCCAATTGGAATCACCATTGCAAAGGTGGAGGCTATCCAGGGACATCAAATTCTACTCTCTGGTGCCGATCTTGTTGATGGAACGCCAGTACTTGATGTTAAACCTTATCTACCGTACTGTGACAGTATCCAAGATGCAACAGTCCCTAAGTGGTTAACGGGGGAAAATGTATTGTCTGTTGCATCCATTTGCTTCTCTGAGGAATTTACTCCCTCTCTATCGGAGTGTTGGCCACTAATAGAAAAGAAATCGCTTTATGCATCGGCAGATGAGTTGAAAAACTTTGTGAAGCAGGTGCTTTCATGGGATATTCGATCATTGTCACAACGTAGCCAACCTCATGAATCCTACCTTACGACTACAAGAGGACATGAGTTGTCCGATGCTAGTTCAGATTCAGATGGTCACCTAGATGAAACACTTCCTAGTGGAACTTCCCAAAGTTCTTCTAAGAGCGTTGTCTATCACCTACTTGTAGATGGATTAAATGTGTCGTACACAATCGGTTGCCAAGGCGACGTGGTTGTGAGAAAAGTGGAACTTGCATCACCCAGCTGA MAYAAVSRSSTAAMTVTLAFVSASAILSLYFVTKKSRELGSKVRELEASLAASLKKTIAERQGRIRAQQALRKAVSEPKSDSVECTLYPMAPIGTIQSSFSTRNGTPRQSLVVPLARARLVFSSRIPPASIEGLGEYSHCWVIYVFHLNTNLDKLWKDPSKSKFKAKVKVPRLKGEKVGIFATRSPHRPCPIGITIAKVEAIQGHQILLSGADLVDGTPVLDVKPYLPYCDSIQDATVPKWLTGENVLSVASICFSEEFTPSLSECWPLIEKKSLYASADELKNFVKQVLSWDIRSLSQRSQPHESYLTTTRGHELSDASSDSDGHLDETLPSGTSQSSSKSVVYHLLVDGLNVSYTIGCQGDVVVRKVELASPS Homology
BLAST of Cp4.1LG18g05910 vs. ExPASy Swiss-Prot
Match: Q9BU70 (tRNA (adenine(37)-N6)-methyltransferase OS=Homo sapiens OX=9606 GN=TRMO PE=1 SV=2) HSP 1 Score: 142.1 bits (357), Expect = 1.3e-32 Identity = 71/151 (47.02%), Postives = 97/151 (64.24%), Query Frame = 0
BLAST of Cp4.1LG18g05910 vs. ExPASy Swiss-Prot
Match: Q562D6 (tRNA (adenine(37)-N6)-methyltransferase OS=Mus musculus OX=10090 GN=Trmo PE=2 SV=2) HSP 1 Score: 141.0 bits (354), Expect = 2.8e-32 Identity = 70/150 (46.67%), Postives = 98/150 (65.33%), Query Frame = 0
BLAST of Cp4.1LG18g05910 vs. ExPASy Swiss-Prot
Match: Q4V7E0 (tRNA (adenine(37)-N6)-methyltransferase OS=Rattus norvegicus OX=10116 GN=Trmo PE=2 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 4.0e-31 Identity = 68/147 (46.26%), Postives = 96/147 (65.31%), Query Frame = 0
BLAST of Cp4.1LG18g05910 vs. ExPASy Swiss-Prot
Match: Q9RPT0 (Putative S-adenosylmethionine-dependent methyltransferase RcsF OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=rcsF PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 3.9e-26 Identity = 74/229 (32.31%), Postives = 120/229 (52.40%), Query Frame = 0
BLAST of Cp4.1LG18g05910 vs. ExPASy Swiss-Prot
Match: O68638 (Putative S-adenosylmethionine-dependent methyltransferase RcsF OS=Pseudomonas aeruginosa OX=287 GN=rcsF PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 4.8e-24 Identity = 59/154 (38.31%), Postives = 93/154 (60.39%), Query Frame = 0
BLAST of Cp4.1LG18g05910 vs. NCBI nr
Match: XP_023515484.1 (uncharacterized protein LOC111779629 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 724 bits (1870), Expect = 4.32e-263 Identity = 375/375 (100.00%), Postives = 375/375 (100.00%), Query Frame = 0
BLAST of Cp4.1LG18g05910 vs. NCBI nr
Match: XP_022988427.1 (uncharacterized protein LOC111485678 [Cucurbita maxima]) HSP 1 Score: 716 bits (1849), Expect = 6.86e-260 Identity = 369/375 (98.40%), Postives = 373/375 (99.47%), Query Frame = 0
BLAST of Cp4.1LG18g05910 vs. NCBI nr
Match: XP_022965024.1 (uncharacterized protein LOC111464972 [Cucurbita moschata]) HSP 1 Score: 716 bits (1848), Expect = 9.75e-260 Identity = 370/375 (98.67%), Postives = 372/375 (99.20%), Query Frame = 0
BLAST of Cp4.1LG18g05910 vs. NCBI nr
Match: KAG7023410.1 (tRNA (adenine(37)-N6)-methyltransferase [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 716 bits (1847), Expect = 1.38e-259 Identity = 369/375 (98.40%), Postives = 372/375 (99.20%), Query Frame = 0
BLAST of Cp4.1LG18g05910 vs. NCBI nr
Match: XP_038879626.1 (tRNA (adenine(37)-N6)-methyltransferase isoform X1 [Benincasa hispida]) HSP 1 Score: 628 bits (1620), Expect = 6.42e-225 Identity = 315/375 (84.00%), Postives = 353/375 (94.13%), Query Frame = 0
BLAST of Cp4.1LG18g05910 vs. ExPASy TrEMBL
Match: A0A6J1JCZ9 (uncharacterized protein LOC111485678 OS=Cucurbita maxima OX=3661 GN=LOC111485678 PE=4 SV=1) HSP 1 Score: 716 bits (1849), Expect = 3.32e-260 Identity = 369/375 (98.40%), Postives = 373/375 (99.47%), Query Frame = 0
BLAST of Cp4.1LG18g05910 vs. ExPASy TrEMBL
Match: A0A6J1HPV8 (uncharacterized protein LOC111464972 OS=Cucurbita moschata OX=3662 GN=LOC111464972 PE=4 SV=1) HSP 1 Score: 716 bits (1848), Expect = 4.72e-260 Identity = 370/375 (98.67%), Postives = 372/375 (99.20%), Query Frame = 0
BLAST of Cp4.1LG18g05910 vs. ExPASy TrEMBL
Match: A0A6J1BYL5 (uncharacterized protein LOC111006924 OS=Momordica charantia OX=3673 GN=LOC111006924 PE=4 SV=1) HSP 1 Score: 619 bits (1597), Expect = 9.90e-222 Identity = 312/375 (83.20%), Postives = 347/375 (92.53%), Query Frame = 0
BLAST of Cp4.1LG18g05910 vs. ExPASy TrEMBL
Match: A0A5D3CC84 (tRNA (Adenine(37)-N6)-methyltransferase isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold499G00580 PE=4 SV=1) HSP 1 Score: 615 bits (1587), Expect = 3.30e-220 Identity = 313/375 (83.47%), Postives = 348/375 (92.80%), Query Frame = 0
BLAST of Cp4.1LG18g05910 vs. ExPASy TrEMBL
Match: A0A0A0LTM6 (TsaA-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G295140 PE=4 SV=1) HSP 1 Score: 612 bits (1578), Expect = 6.44e-219 Identity = 314/375 (83.73%), Postives = 348/375 (92.80%), Query Frame = 0
BLAST of Cp4.1LG18g05910 vs. TAIR 10
Match: AT4G28020.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0066 (InterPro:IPR001378); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 397.9 bits (1021), Expect = 9.0e-111 Identity = 199/364 (54.67%), Postives = 271/364 (74.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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