Cp4.1LG18g05890 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG18g05890
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	transcription factor IBH1-like 1
Location	Cp4.1LG18: 6329407 .. 6329958 (+)
RNA-Seq Expression	Cp4.1LG18g05890
Synteny	Cp4.1LG18g05890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCAATCCCAATTCGTTGAAACGAGATTTTTTGAAGAAATGGCTGATGGGTCTTCAAATATACACAACCACCAACCGAAACATGACCGTCGCCGACAGAAAAAGGGCCATAAAGTTATCCGCCGATATTGCTTTGGCGTCCTCCAGAAACTGTGCCACTCGTTGGAGCCGAGCTGTCATTGCTGGCACCTCCGTCCATGACGGCAGCTTCCTGGTGGCTAACGGCGTATTGGGTCGTGCTGTATGCGAGAGAATCAAGGAAAGCAGTTCAAAAATCACGCGAAGTTCGTGGTGTAGTGGGAAGATTCTGAAACGGAGCCGCCGTGTGGGGCGGAGGAAAAAATGTAGGAAGGCGGGTGCTGAGTGGATTGCAAAAAGGTTGGTGCAAAAAAGAACAAGAATGCTTCGTGGGTTGGTTCCCGGAGGTGAATTTATGGATGAAGTTTCGTTAATTGAAGAAACCCTAGATTACATTTTGGCTCTTCAAACTCAGGTTGATGTCATGCGGTGTCTTGCAACGACTGCATACGTAGCGCCACCATCATTATGA

mRNA sequence

ATGAGCAATCCCAATTCGTTGAAACGAGATTTTTTGAAGAAATGGCTGATGGGTCTTCAAATATACACAACCACCAACCGAAACATGACCGTCGCCGACAGAAAAAGGGCCATAAAGTTATCCGCCGATATTGCTTTGGCGTCCTCCAGAAACTGTGCCACTCGTTGGAGCCGAGCTGTCATTGCTGGCACCTCCGTCCATGACGGCAGCTTCCTGGTGGCTAACGGCGTATTGGGTCGTGCTGTATGCGAGAGAATCAAGGAAAGCAGTTCAAAAATCACGCGAAGTTCGTGGTGTAGTGGGAAGATTCTGAAACGGAGCCGCCGTGTGGGGCGGAGGAAAAAATGTAGGAAGGCGGGTGCTGAGTGGATTGCAAAAAGGTTGGTGCAAAAAAGAACAAGAATGCTTCGTGGGTTGGTTCCCGGAGGTGAATTTATGGATGAAGTTTCGTTAATTGAAGAAACCCTAGATTACATTTTGGCTCTTCAAACTCAGGTTGATGTCATGCGGTGTCTTGCAACGACTGCATACGTAGCGCCACCATCATTATGA

Coding sequence (CDS)

ATGAGCAATCCCAATTCGTTGAAACGAGATTTTTTGAAGAAATGGCTGATGGGTCTTCAAATATACACAACCACCAACCGAAACATGACCGTCGCCGACAGAAAAAGGGCCATAAAGTTATCCGCCGATATTGCTTTGGCGTCCTCCAGAAACTGTGCCACTCGTTGGAGCCGAGCTGTCATTGCTGGCACCTCCGTCCATGACGGCAGCTTCCTGGTGGCTAACGGCGTATTGGGTCGTGCTGTATGCGAGAGAATCAAGGAAAGCAGTTCAAAAATCACGCGAAGTTCGTGGTGTAGTGGGAAGATTCTGAAACGGAGCCGCCGTGTGGGGCGGAGGAAAAAATGTAGGAAGGCGGGTGCTGAGTGGATTGCAAAAAGGTTGGTGCAAAAAAGAACAAGAATGCTTCGTGGGTTGGTTCCCGGAGGTGAATTTATGGATGAAGTTTCGTTAATTGAAGAAACCCTAGATTACATTTTGGCTCTTCAAACTCAGGTTGATGTCATGCGGTGTCTTGCAACGACTGCATACGTAGCGCCACCATCATTATGA

Protein sequence

MSNPNSLKRDFLKKWLMGLQIYTTTNRNMTVADRKRAIKLSADIALASSRNCATRWSRAVIAGTSVHDGSFLVANGVLGRAVCERIKESSSKITRSSWCSGKILKRSRRVGRRKKCRKAGAEWIAKRLVQKRTRMLRGLVPGGEFMDEVSLIEETLDYILALQTQVDVMRCLATTAYVAPPSL

Homology

[Close]

BLAST of Cp4.1LG18g05890 vs. ExPASy Swiss-Prot
Match: Q9M0B9 (Transcription factor IBH1-like 1 OS=Arabidopsis thaliana OX=3702 GN=IBL1 PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 3.2e-29
Identity = 83/178 (46.63%), Postives = 118/178 (66.29%), Query Frame = 0


Query: 1   MSNPNSLKRDFLKKWLMGLQIYTTTNRNMTVADRKRAIKLSADIALASSRNCATRWSRAV 60
           M   +S+  +FLKKW MGLQI+  +  N +V +RK+AIKLSAD+A+AS R   T WSRA+
Sbjct: 1   MQPTSSMNEEFLKKWQMGLQIFRPSIDNTSVHERKKAIKLSADVAMASLRKGTTCWSRAL 60

Query: 61  IAGTSVHDGSFLVANGVLGRAVCERIKESSSKITRSSWCSGKILKRSRRVGRRK-KCRKA 120
           I  T+  D +FLV   + G      I   + K+ + + C  KI++RS+++ RRK K    
Sbjct: 61  IEKTATED-NFLVRQMLSGIKAETLI---NKKLPKKTVCHRKIVRRSKKILRRKSKSASE 120

Query: 121 GAEWIAKRLVQKRTRMLRGLVPGGEFM-DEVSLIEETLDYILALQTQVDVMRCLATTA 177
            A   AKRLV++RT+ LR +VPGGE M ++V L++ETLDYI++LQTQV+VMR +   A
Sbjct: 121 EAAAKAKRLVKRRTQGLRNVVPGGELMSNDVLLLQETLDYIVSLQTQVNVMRSIVDAA 174

[Close]

BLAST of Cp4.1LG18g05890 vs. ExPASy Swiss-Prot
Match: Q9SKX1 (Transcription factor IBH1 OS=Arabidopsis thaliana OX=3702 GN=IBH1 PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 4.6e-04
Identity = 43/140 (30.71%), Postives = 62/140 (44.29%), Query Frame = 0


Query: 34  RKRAIKLSADIALASSRNCATR-WSRAVIAGTSVHDGSFLVANGVLGRAVCERIKESSSK 93
           R R IK +A +++A +   ++R WSRA++                       R  +  +K
Sbjct: 44  RVRKIKKAAYVSMARAAGGSSRLWSRALL----------------------RRADKDDNK 103

Query: 94  ITRSSWCSGKILKRSRRVGRRKKCRKAGAEWIAKRLVQKRTRMLRGLVPGGEFMDEVSLI 153
           I R S    KI  + RR  +R              +V++    LR LVPGG  M+   L+
Sbjct: 104 IVRFSRRKWKISSKRRRSNQRAP------------VVEEAAERLRNLVPGGGGMETSKLM 149

Query: 154 EETLDYILALQTQVDVMRCL 173
           EET  YI  L  QV VM+CL
Sbjct: 164 EETAHYIKCLSMQVKVMQCL 149

[Close]

BLAST of Cp4.1LG18g05890 vs. NCBI nr
Match: XP_023515816.1 (transcription factor IBH1-like 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 355 bits (912), Expect = 1.72e-123
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 1   MSNPNSLKRDFLKKWLMGLQIYTTTNRNMTVADRKRAIKLSADIALASSRNCATRWSRAV 60
           MSNPNSLKRDFLKKWLMGLQIYTTTNRNMTVADRKRAIKLSADIALASSRNCATRWSRAV
Sbjct: 1   MSNPNSLKRDFLKKWLMGLQIYTTTNRNMTVADRKRAIKLSADIALASSRNCATRWSRAV 60

Query: 61  IAGTSVHDGSFLVANGVLGRAVCERIKESSSKITRSSWCSGKILKRSRRVGRRKKCRKAG 120
           IAGTSVHDGSFLVANGVLGRAVCERIKESSSKITRSSWCSGKILKRSRRVGRRKKCRKAG
Sbjct: 61  IAGTSVHDGSFLVANGVLGRAVCERIKESSSKITRSSWCSGKILKRSRRVGRRKKCRKAG 120

Query: 121 AEWIAKRLVQKRTRMLRGLVPGGEFMDEVSLIEETLDYILALQTQVDVMRCLATTAYVAP 180
           AEWIAKRLVQKRTRMLRGLVPGGEFMDEVSLIEETLDYILALQTQVDVMRCLATTAYVAP
Sbjct: 121 AEWIAKRLVQKRTRMLRGLVPGGEFMDEVSLIEETLDYILALQTQVDVMRCLATTAYVAP 180

Query: 181 PSL 183
           PSL
Sbjct: 181 PSL 183

[Close]

BLAST of Cp4.1LG18g05890 vs. NCBI nr
Match: XP_022988593.1 (transcription factor IBH1-like 1 [Cucurbita maxima])

HSP 1 Score: 338 bits (866), Expect = 1.78e-116
Identity = 174/183 (95.08%), Postives = 178/183 (97.27%), Query Frame = 0


Query: 1   MSNPNSLKRDFLKKWLMGLQIYTTTNRNMTVADRKRAIKLSADIALASSRNCATRWSRAV 60
           M NP+SLKRDFLKKWLMGLQIYTTTNRNMTVADRKRAIKLSADIALASSRNCATRWSRAV
Sbjct: 1   MRNPSSLKRDFLKKWLMGLQIYTTTNRNMTVADRKRAIKLSADIALASSRNCATRWSRAV 60

Query: 61  IAGTSVHDGSFLVANGVLGRAVCERIKESSSKITRSSWCSGKILKRSRRVGRRKKCRKAG 120
           IAGTSVHDGSFLVANG+LGRAVCERIK+SSSKITRSSW SGKILKRSRRVGRRKKCRK  
Sbjct: 61  IAGTSVHDGSFLVANGLLGRAVCERIKQSSSKITRSSWSSGKILKRSRRVGRRKKCRKPA 120

Query: 121 AEWIAKRLVQKRTRMLRGLVPGGEFMDEVSLIEETLDYILALQTQVDVMRCLATTAYVAP 180
           AEWIA+RLVQKRTR LRGLVPGGEFMDEVSLIEETLDYILALQTQVDVMRCLATTAYVAP
Sbjct: 121 AEWIARRLVQKRTRTLRGLVPGGEFMDEVSLIEETLDYILALQTQVDVMRCLATTAYVAP 180

Query: 181 PSL 183
           PSL
Sbjct: 181 PSL 183

[Close]

BLAST of Cp4.1LG18g05890 vs. NCBI nr
Match: XP_022921880.1 (transcription factor IBH1-like 1 [Cucurbita moschata])

HSP 1 Score: 333 bits (854), Expect = 1.20e-114
Identity = 174/183 (95.08%), Postives = 175/183 (95.63%), Query Frame = 0


Query: 1   MSNPNSLKRDFLKKWLMGLQIYTTTNRNMTVADRKRAIKLSADIALASSRNCATRWSRAV 60
           M NP+ LKRDFLKKW MGLQIYTTTNRNMTVADRKRAIKLSADIALASSRNCATRWSRAV
Sbjct: 1   MRNPSWLKRDFLKKWRMGLQIYTTTNRNMTVADRKRAIKLSADIALASSRNCATRWSRAV 60

Query: 61  IAGTSVHDGSFLVANGVLGRAVCERIKESSSKITRSSWCSGKILKRSRRVGRRKKCRKAG 120
           IAGTSVHDGSFLVANGVLGRAVCERIKESSSKITRSSW S KILKRSRRVGRRKKCRK  
Sbjct: 61  IAGTSVHDGSFLVANGVLGRAVCERIKESSSKITRSSWSSRKILKRSRRVGRRKKCRKPA 120

Query: 121 AEWIAKRLVQKRTRMLRGLVPGGEFMDEVSLIEETLDYILALQTQVDVMRCLATTAYVAP 180
           AEWIAKRLVQKRTR LRGLVPGGEFMDEVSLIEETLDYILALQTQVDVMRCLATTAYVAP
Sbjct: 121 AEWIAKRLVQKRTRTLRGLVPGGEFMDEVSLIEETLDYILALQTQVDVMRCLATTAYVAP 180

Query: 181 PSL 183
           PSL
Sbjct: 181 PSL 183

[Close]

BLAST of Cp4.1LG18g05890 vs. NCBI nr
Match: KAG7023415.1 (Transcription factor IBH1-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 333 bits (854), Expect = 1.59e-114
Identity = 174/183 (95.08%), Postives = 175/183 (95.63%), Query Frame = 0


Query: 1   MSNPNSLKRDFLKKWLMGLQIYTTTNRNMTVADRKRAIKLSADIALASSRNCATRWSRAV 60
           M NP+ LKRDFLKKW MGLQIYTTTNRNMTVADRKRAIKLSADIALASSRNCATRWSRAV
Sbjct: 9   MRNPSWLKRDFLKKWRMGLQIYTTTNRNMTVADRKRAIKLSADIALASSRNCATRWSRAV 68

Query: 61  IAGTSVHDGSFLVANGVLGRAVCERIKESSSKITRSSWCSGKILKRSRRVGRRKKCRKAG 120
           IAGTSVHDGSFLVANGVLGRAVCERIKESSSKITRSSW S KILKRSRRVGRRKKCRK  
Sbjct: 69  IAGTSVHDGSFLVANGVLGRAVCERIKESSSKITRSSWSSRKILKRSRRVGRRKKCRKPA 128

Query: 121 AEWIAKRLVQKRTRMLRGLVPGGEFMDEVSLIEETLDYILALQTQVDVMRCLATTAYVAP 180
           AEWIAKRLVQKRTR LRGLVPGGEFMDEVSLIEETLDYILALQTQVDVMRCLATTAYVAP
Sbjct: 129 AEWIAKRLVQKRTRTLRGLVPGGEFMDEVSLIEETLDYILALQTQVDVMRCLATTAYVAP 188

Query: 181 PSL 183
           PSL
Sbjct: 189 PSL 191

[Close]

BLAST of Cp4.1LG18g05890 vs. NCBI nr
Match: KAG6589740.1 (Transcription factor IBH1-like 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 283 bits (725), Expect = 2.10e-95
Identity = 150/155 (96.77%), Postives = 150/155 (96.77%), Query Frame = 0


Query: 29  MTVADRKRAIKLSADIALASSRNCATRWSRAVIAGTSVHDGSFLVANGVLGRAVCERIKE 88
           MTVADRKRAIKLSADIALASSRNCATRWSRAVIAGTSVHDGSFLVANGVLGRAVCERIKE
Sbjct: 1   MTVADRKRAIKLSADIALASSRNCATRWSRAVIAGTSVHDGSFLVANGVLGRAVCERIKE 60

Query: 89  SSSKITRSSWCSGKILKRSRRVGRRKKCRKAGAEWIAKRLVQKRTRMLRGLVPGGEFMDE 148
           SSSKITRSSW S KILKRSRRVGRRKKCRK  AEWIAKRLVQKRTR LRGLVPGGEFMDE
Sbjct: 61  SSSKITRSSWSSRKILKRSRRVGRRKKCRKPAAEWIAKRLVQKRTRTLRGLVPGGEFMDE 120

Query: 149 VSLIEETLDYILALQTQVDVMRCLATTAYVAPPSL 183
           VSLIEETLDYILALQTQVDVMRCLATTAYVAPPSL
Sbjct: 121 VSLIEETLDYILALQTQVDVMRCLATTAYVAPPSL 155

[Close]

BLAST of Cp4.1LG18g05890 vs. ExPASy TrEMBL
Match: A0A6J1JMR3 (transcription factor IBH1-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111485792 PE=4 SV=1)

HSP 1 Score: 338 bits (866), Expect = 8.61e-117
Identity = 174/183 (95.08%), Postives = 178/183 (97.27%), Query Frame = 0


Query: 1   MSNPNSLKRDFLKKWLMGLQIYTTTNRNMTVADRKRAIKLSADIALASSRNCATRWSRAV 60
           M NP+SLKRDFLKKWLMGLQIYTTTNRNMTVADRKRAIKLSADIALASSRNCATRWSRAV
Sbjct: 1   MRNPSSLKRDFLKKWLMGLQIYTTTNRNMTVADRKRAIKLSADIALASSRNCATRWSRAV 60

Query: 61  IAGTSVHDGSFLVANGVLGRAVCERIKESSSKITRSSWCSGKILKRSRRVGRRKKCRKAG 120
           IAGTSVHDGSFLVANG+LGRAVCERIK+SSSKITRSSW SGKILKRSRRVGRRKKCRK  
Sbjct: 61  IAGTSVHDGSFLVANGLLGRAVCERIKQSSSKITRSSWSSGKILKRSRRVGRRKKCRKPA 120

Query: 121 AEWIAKRLVQKRTRMLRGLVPGGEFMDEVSLIEETLDYILALQTQVDVMRCLATTAYVAP 180
           AEWIA+RLVQKRTR LRGLVPGGEFMDEVSLIEETLDYILALQTQVDVMRCLATTAYVAP
Sbjct: 121 AEWIARRLVQKRTRTLRGLVPGGEFMDEVSLIEETLDYILALQTQVDVMRCLATTAYVAP 180

Query: 181 PSL 183
           PSL
Sbjct: 181 PSL 183

[Close]

BLAST of Cp4.1LG18g05890 vs. ExPASy TrEMBL
Match: A0A6J1E715 (transcription factor IBH1-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111430013 PE=4 SV=1)

HSP 1 Score: 333 bits (854), Expect = 5.82e-115
Identity = 174/183 (95.08%), Postives = 175/183 (95.63%), Query Frame = 0


Query: 1   MSNPNSLKRDFLKKWLMGLQIYTTTNRNMTVADRKRAIKLSADIALASSRNCATRWSRAV 60
           M NP+ LKRDFLKKW MGLQIYTTTNRNMTVADRKRAIKLSADIALASSRNCATRWSRAV
Sbjct: 1   MRNPSWLKRDFLKKWRMGLQIYTTTNRNMTVADRKRAIKLSADIALASSRNCATRWSRAV 60

Query: 61  IAGTSVHDGSFLVANGVLGRAVCERIKESSSKITRSSWCSGKILKRSRRVGRRKKCRKAG 120
           IAGTSVHDGSFLVANGVLGRAVCERIKESSSKITRSSW S KILKRSRRVGRRKKCRK  
Sbjct: 61  IAGTSVHDGSFLVANGVLGRAVCERIKESSSKITRSSWSSRKILKRSRRVGRRKKCRKPA 120

Query: 121 AEWIAKRLVQKRTRMLRGLVPGGEFMDEVSLIEETLDYILALQTQVDVMRCLATTAYVAP 180
           AEWIAKRLVQKRTR LRGLVPGGEFMDEVSLIEETLDYILALQTQVDVMRCLATTAYVAP
Sbjct: 121 AEWIAKRLVQKRTRTLRGLVPGGEFMDEVSLIEETLDYILALQTQVDVMRCLATTAYVAP 180

Query: 181 PSL 183
           PSL
Sbjct: 181 PSL 183

[Close]

BLAST of Cp4.1LG18g05890 vs. ExPASy TrEMBL
Match: A0A1S3B8V1 (uncharacterized protein LOC103487305 OS=Cucumis melo OX=3656 GN=LOC103487305 PE=4 SV=1)

HSP 1 Score: 248 bits (633), Expect = 2.89e-81
Identity = 134/177 (75.71%), Postives = 154/177 (87.01%), Query Frame = 0


Query: 1   MSNPNSLKRDFLKKWLMGLQIYTTTNRNMTVADRKRAIKLSADIALASSRNCATRWSRAV 60
           M NPNSLK++FLKKW+MGLQIYTTTN NMTVA+RK AIKLSADIALASSRNCATRWSRAV
Sbjct: 1   MQNPNSLKQEFLKKWMMGLQIYTTTNENMTVAERKTAIKLSADIALASSRNCATRWSRAV 60

Query: 61  IAGTSVHDGSFLVANGVLGRAVCERIKESSS-KITRSSWCSGKILKRSRRVGRRKKCRKA 120
           IA +SV + S LVANGVLGR +CER+K+ S+ KITRSSW SGKI+KRSRRV RR++ R  
Sbjct: 61  IARSSVDNRSCLVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 120

Query: 121 --GAEWIAKRLVQKRTRMLRGLVPGGEFMDEVSLIEETLDYILALQTQVDVMRCLAT 174
              A  IA+RLVQ+RT++LRGLVPGGEFMDE+SLIEETLDY+ ALQ QVDVMR LA+
Sbjct: 121 CMAAVTIARRLVQRRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLAS 177

[Close]

BLAST of Cp4.1LG18g05890 vs. ExPASy TrEMBL
Match: A0A0A0LWQ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G294080 PE=4 SV=1)

HSP 1 Score: 243 bits (620), Expect = 2.75e-79
Identity = 132/177 (74.58%), Postives = 150/177 (84.75%), Query Frame = 0


Query: 1   MSNPNSLKRDFLKKWLMGLQIYTTTNRNMTVADRKRAIKLSADIALASSRNCATRWSRAV 60
           M N NSLK++F KKW+MGLQIYTTTN NMTV +RK AIKLSADIALASSRNCATRWSRAV
Sbjct: 1   MQNSNSLKQEFFKKWMMGLQIYTTTNENMTVTERKTAIKLSADIALASSRNCATRWSRAV 60

Query: 61  IAGTSVHDGSFLVANGVLGRAVCERIKESSS-KITRSSWCSGKILKRSRRVGRRKKCRKA 120
           IA +SV + S  VANGVLGR +CER+K+ S+ KITRSSW SGKI+KRSRRV RR++ R  
Sbjct: 61  IARSSVDNRSCFVANGVLGRGLCERVKQISNLKITRSSWSSGKIVKRSRRVWRRRRRRNK 120

Query: 121 --GAEWIAKRLVQKRTRMLRGLVPGGEFMDEVSLIEETLDYILALQTQVDVMRCLAT 174
              A  IA+RLVQKRT++LRGLVPGGEFMDE+SLIEETLDY+ ALQ QVDVMR LAT
Sbjct: 121 CMAAVTIARRLVQKRTKVLRGLVPGGEFMDEISLIEETLDYMSALQAQVDVMRFLAT 177

[Close]

BLAST of Cp4.1LG18g05890 vs. ExPASy TrEMBL
Match: A0A6J1F0A2 (transcription factor IBH1-like 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111441170 PE=4 SV=1)

HSP 1 Score: 238 bits (606), Expect = 2.66e-77
Identity = 130/183 (71.04%), Postives = 151/183 (82.51%), Query Frame = 0


Query: 1   MSNPNSLKRDFLKKWLMGLQIYTTTNRNMTVADRKRAIKLSADIALASSRNCATRWSRAV 60
           M NP+ LKR+FLKKW+MGL+IYTT+N+NMTV  RK AIKLSADIALASSRNCATRWS+A+
Sbjct: 1   MRNPSCLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQAL 60

Query: 61  IAGTSVHDGSFLVANGVLGRAVCERIKESSSKITRSSWCSGKILKRSRRVGR-RKKCRKA 120
           IA TSV DGS LVA+ +LGR +       + KITR  W SGKI+KRSRRV R R+KC+K 
Sbjct: 61  IAATSVDDGSRLVADVLLGRTI-------NPKITRIMWSSGKIVKRSRRVQRMRRKCKKP 120

Query: 121 GAEWIAKRLVQKRTRMLRGLVPGGEFMDEVSLIEETLDYILALQTQVDVMRCLATTAYVA 180
            AE IAK+LV+KR ++LRGLVPGGEFMDE+SLIEETLDYI ALQ QVDVMRCLAT AY+A
Sbjct: 121 AAELIAKKLVRKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLAT-AYIA 175

Query: 181 PPS 182
             S
Sbjct: 181 SSS 175

[Close]

BLAST of Cp4.1LG18g05890 vs. TAIR 10
Match: AT4G30410.2 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 129.8 bits (325), Expect = 2.2e-30
Identity = 83/178 (46.63%), Postives = 118/178 (66.29%), Query Frame = 0


Query: 1   MSNPNSLKRDFLKKWLMGLQIYTTTNRNMTVADRKRAIKLSADIALASSRNCATRWSRAV 60
           M   +S+  +FLKKW MGLQI+  +  N +V +RK+AIKLSAD+A+AS R   T WSRA+
Sbjct: 1   MQPTSSMNEEFLKKWQMGLQIFRPSIDNTSVHERKKAIKLSADVAMASLRKGTTCWSRAL 60

Query: 61  IAGTSVHDGSFLVANGVLGRAVCERIKESSSKITRSSWCSGKILKRSRRVGRRK-KCRKA 120
           I  T+  D +FLV   + G      I   + K+ + + C  KI++RS+++ RRK K    
Sbjct: 61  IEKTATED-NFLVRQMLSGIKAETLI---NKKLPKKTVCHRKIVRRSKKILRRKSKSASE 120

Query: 121 GAEWIAKRLVQKRTRMLRGLVPGGEFM-DEVSLIEETLDYILALQTQVDVMRCLATTA 177
            A   AKRLV++RT+ LR +VPGGE M ++V L++ETLDYI++LQTQV+VMR +   A
Sbjct: 121 EAAAKAKRLVKRRTQGLRNVVPGGELMSNDVLLLQETLDYIVSLQTQVNVMRSIVDAA 174

[Close]

BLAST of Cp4.1LG18g05890 vs. TAIR 10
Match: AT4G30410.1 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 129.8 bits (325), Expect = 2.2e-30
Identity = 83/178 (46.63%), Postives = 118/178 (66.29%), Query Frame = 0


Query: 1   MSNPNSLKRDFLKKWLMGLQIYTTTNRNMTVADRKRAIKLSADIALASSRNCATRWSRAV 60
           M   +S+  +FLKKW MGLQI+  +  N +V +RK+AIKLSAD+A+AS R   T WSRA+
Sbjct: 1   MQPTSSMNEEFLKKWQMGLQIFRPSIDNTSVHERKKAIKLSADVAMASLRKGTTCWSRAL 60

Query: 61  IAGTSVHDGSFLVANGVLGRAVCERIKESSSKITRSSWCSGKILKRSRRVGRRK-KCRKA 120
           I  T+  D +FLV   + G      I   + K+ + + C  KI++RS+++ RRK K    
Sbjct: 61  IEKTATED-NFLVRQMLSGIKAETLI---NKKLPKKTVCHRKIVRRSKKILRRKSKSASE 120

Query: 121 GAEWIAKRLVQKRTRMLRGLVPGGEFM-DEVSLIEETLDYILALQTQVDVMRCLATTA 177
            A   AKRLV++RT+ LR +VPGGE M ++V L++ETLDYI++LQTQV+VMR +   A
Sbjct: 121 EAAAKAKRLVKRRTQGLRNVVPGGELMSNDVLLLQETLDYIVSLQTQVNVMRSIVDAA 174

[Close]

BLAST of Cp4.1LG18g05890 vs. TAIR 10
Match: AT5G57780.1 (EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT4G30410.1); Has 123 Blast hits to 123 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 123; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 92.0 bits (227), Expect = 5.2e-19
Identity = 64/176 (36.36%), Postives = 100/176 (56.82%), Query Frame = 0


Query: 1   MSNPNSLKRDFLKKWLMGLQIY-TTTNRNMTVADRKRAIKLSADIALASSRNCATRWSRA 60
           M+  N +K++F+KKW+  L +  ++    + V +RK AI+LS+D+A+A++RN +T WSRA
Sbjct: 2   MNTYNMVKQEFIKKWINTLHMLDSSIEHPLNVTERKNAIRLSSDLAMAAARNGSTVWSRA 61

Query: 61  VIAGTSVHDGSFLVANGVLGRAVCERIKESSSKITRSSWCSGKILKRSR-RVGRRKKCRK 120
           +I+                           S   T +   + +ILK++R R+  R    +
Sbjct: 62  LIS--------------------------RSGNKTANKPMARRILKKARNRMKNRCNILR 121

Query: 121 AGAEWIAKRLVQKRTRMLRGLVPGGEFMDEVS-LIEETLDYILALQTQVDVMRCLA 174
               + AK  V+KRT +L+ LVPGGE +D+   LI ETLDYI+ L+ QVDVMR +A
Sbjct: 122 RNGNFTAKTWVRKRTDLLKSLVPGGELIDDKDYLIRETLDYIVYLRAQVDVMRTVA 151

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BLAST of Cp4.1LG18g05890 vs. TAIR 10
Match: AT2G43060.1 (ILI1 binding bHLH 1 )

HSP 1 Score: 46.2 bits (108), Expect = 3.3e-05
Identity = 43/140 (30.71%), Postives = 62/140 (44.29%), Query Frame = 0


Query: 34  RKRAIKLSADIALASSRNCATR-WSRAVIAGTSVHDGSFLVANGVLGRAVCERIKESSSK 93
           R R IK +A +++A +   ++R WSRA++                       R  +  +K
Sbjct: 44  RVRKIKKAAYVSMARAAGGSSRLWSRALL----------------------RRADKDDNK 103

Query: 94  ITRSSWCSGKILKRSRRVGRRKKCRKAGAEWIAKRLVQKRTRMLRGLVPGGEFMDEVSLI 153
           I R S    KI  + RR  +R              +V++    LR LVPGG  M+   L+
Sbjct: 104 IVRFSRRKWKISSKRRRSNQRAP------------VVEEAAERLRNLVPGGGGMETSKLM 149

Query: 154 EETLDYILALQTQVDVMRCL 173
           EET  YI  L  QV VM+CL
Sbjct: 164 EETAHYIKCLSMQVKVMQCL 149

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BLAST of Cp4.1LG18g05890 vs. TAIR 10
Match: AT3G05800.1 (AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1 )

HSP 1 Score: 43.1 bits (100), Expect = 2.8e-04
Identity = 47/167 (28.14%), Postives = 69/167 (41.32%), Query Frame = 0


Query: 19  LQIYTTTNRNMTVADRKRAIKLSADIALASSRNCATRWSRAVIA---GTSVHDGSFLVAN 78
           L++Y    R+     R   ++ +AD  LA++   ATRWSRA++    GTS+         
Sbjct: 74  LKLYDALQRSR----RSATVRDTADKVLATTARGATRWSRAILVSRFGTSLR-------- 133

Query: 79  GVLGRAVCERIKESSSKITRSSWCSGKILKRSRRVGRRKKCRKAGAEWIAKRLVQKRTRM 138
                           + T+ +      ++ S   GRR+K    G           R R+
Sbjct: 134 --------------RRRNTKPASALAAAIRGSGGSGRRRKLSAVG----------NRVRV 193

Query: 139 LRGLVPGGEFMDEVSLIEETLDYILALQTQVDVMRCLATTAYVAPPS 183
           L GLVPG        L++ET DYI AL+ QV  M  L+       PS
Sbjct: 194 LGGLVPGCRRTALPELLDETADYIAALEMQVRAMTALSKILSELQPS 204

The following BLAST results are available for this feature:

BLAST of Cp4.1LG18g05890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M0B9	3.2e-29	46.63	Transcription factor IBH1-like 1 OS=Arabidopsis thaliana OX=3702 GN=IBL1 PE=1 SV...	[more]
Q9SKX1	4.6e-04	30.71	Transcription factor IBH1 OS=Arabidopsis thaliana OX=3702 GN=IBH1 PE=1 SV=1	[more]

BLAST of Cp4.1LG18g05890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023515816.1	1.72e-123	100.00	transcription factor IBH1-like 1 [Cucurbita pepo subsp. pepo]	[more]
XP_022988593.1	1.78e-116	95.08	transcription factor IBH1-like 1 [Cucurbita maxima]	[more]
XP_022921880.1	1.20e-114	95.08	transcription factor IBH1-like 1 [Cucurbita moschata]	[more]
KAG7023415.1	1.59e-114	95.08	Transcription factor IBH1-like 1, partial [Cucurbita argyrosperma subsp. argyros...	[more]
KAG6589740.1	2.10e-95	96.77	Transcription factor IBH1-like 1, partial [Cucurbita argyrosperma subsp. sororia...	[more]

BLAST of Cp4.1LG18g05890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JMR3	8.61e-117	95.08	transcription factor IBH1-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111485792 PE=...	[more]
A0A6J1E715	5.82e-115	95.08	transcription factor IBH1-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111430013 P...	[more]
A0A1S3B8V1	2.89e-81	75.71	uncharacterized protein LOC103487305 OS=Cucumis melo OX=3656 GN=LOC103487305 PE=...	[more]
A0A0A0LWQ3	2.75e-79	74.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G294080 PE=4 SV=1	[more]
A0A6J1F0A2	2.66e-77	71.04	transcription factor IBH1-like 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]

BLAST of Cp4.1LG18g05890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30410.2	2.2e-30	46.63	sequence-specific DNA binding transcription factors	[more]
AT4G30410.1	2.2e-30	46.63	sequence-specific DNA binding transcription factors	[more]
AT5G57780.1	5.2e-19	36.36	EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arab...	[more]
AT2G43060.1	3.3e-05	30.71	ILI1 binding bHLH 1	[more]
AT3G05800.1	2.8e-04	28.14	AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33124:SF5	TRANSCRIPTION FACTOR IBH1-LIKE 1	coord: 5..175
IPR044660	Transcription factor IBH1-like	PANTHER	PTHR33124	TRANSCRIPTION FACTOR IBH1-LIKE 1	coord: 5..175
IPR044549	Transcription factor IBH1-like, bHLH domain	CDD	cd11444	bHLH_AtIBH1_like	coord: 126..173 e-value: 1.01701E-12 score: 58.0176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG18g05890.1	Cp4.1LG18g05890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000976	transcription cis-regulatory region binding