Cp4.1LG18g05350 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG18g05350
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionSerine-rich protein-like protein
LocationCp4.1LG18: 5969691 .. 5974532 (-)
RNA-Seq ExpressionCp4.1LG18g05350
SyntenyCp4.1LG18g05350
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGTTTCTTCTAGAAGATCGAGCGGGCCTGTTATGAGGTCTCTCTCACCTTCTGGGAGATTCTGTGGCTCCTATTCTTCTTCTTCGTCTTCGTCTCCGTCTTCTTCGTCATCGGCGTTTGCGTCTTCCACATCAAGCTTTTCCACTGAAAACCCTACTTCGTTTTTCCGTAGATCTCTGTCTCCGTCTCGTGTTCATCTACAAGGTTCTTCTTCTTCTACGTCGGCGTCGTCCGTGAGATTTGCACTGGACCGGTCTATTTCTCCGAATCGGCATATCTCTGTTTTGACTCGTGGCGGTGGGAATCAAGTAGTGAAGAGGCAGAGCAACCAGAAGAGGACGTGCTTGTGCTCTCCGACCACGCATCCTGGTTCGTTTCGGTGTAGTCTCCATAAAGGCGTTCCGTCGCAGCCTACGACTCCTTACTCGTCTAATCGACTCAACGCGCGGAGATCGGCGATGACGAACTCTTTGGTTAGAATCGGAGGAGTTGAAGGCGATTTAGTGAGGCGGGCCCTGGCGTCTCTTATCCGACCTTCGTCTCACAGTCAAAGGCGTCGAGCGGATTTCTGTCCGCGACCGAGCCGGCTTTCAATCATGTCGAAAGCCGATGATCTGTGATGGAAATTTTGGTACGTTGGCCAATAACCTCTGGTTTATTAATCTTTTTATCTCTTCTCTGAGCTTTCAACGACGAAGACGGTGGATTCCGACCACAGGTTCGACGGAAGTGATGGATCTTAGCGCAGGGATACAGAGTTGGAGGCGAAGTATGGGAATCGAATCTGGTTGCCTCTTCAGTGTACCTCGCTTCACGGAGTTGAACTAAAGAACCTATATAACTCTGTGTGTATACATAGCATAAATATATATGGAAGTAAATACAGTTGCCGCGATATTGATAACAATTCGTGGAACTTTTGAACCCTAATTTTTCACCAATTTCAAAATGAAACATAATCAAACCCTAACTGGTTGTAGTTTCGAACTGTACAGGGCTTCTAATTCGAAAAGGAACGATTCAAAATTATTTGCGCCTGCTAATCGCTGAAATCAGTTCATCGTTATCCATATTCCATACGATTCAAATTGTTTCCAGAACACCTATGTTTGTTATTTTGTTCAACGTACACGTCTCCTTCCTTCTGCTGTCGCCTCCGTTCATGGTGGCCGTGAAATTGAAGCCGGTAATTTACGCATTCATGCTTGCCGTACTCCGTTTTGTCAATCGGATGATTTCTTAAAGGTGATTCAATCTCCATCTTTCTTCTTCCTATTTCCCTTGTTTCTTTGAGTTAGATGTTTGTAATTTCTGTTTGTTCTGTTTACAGATGCATTTGAAGGTTGAAACCTAAGAGCTCTGATTTTGAACTGTGAATTTTGTGATCTGAAAGTAAATTCAGGTGGAGATGATTCAAATTTGAATGAAGTTATGAACTAAGACAGACGATGGAATTCTTGACAGCGACTGAACAATTATAATTGGAATTAATTGGAAACAAATCCTGGAATTCAAAAAGGTAAATAACATCAGAGCTGAGATGAAGTTAGAATGGAATAGAAAAGAATCGAATGAAACATTGAATGGTAGGGTAACTCGGTGGTGCGGTGGAGTGGATGGTTGACCTGTCAAGGCTCAAATGGGTGGAAGGAACCGACTGCTATCTGCCTATGAAAAACCAATCCAAATCCCTATTGATTGTTCATAAAACTATTCAATGGAAGAATGCCCCTTTGAGAGATGAAGAGCTGCCTATGTCAGGAGATGTTACATCTTTTTTGCCGAAGGAAACTATGAAGGGATGGTTAAAAAGTGAAAGGAAATTCTGATTGAGATGGTTTCTCACGTTAACCCACAGGGAATGATCATGAATTTGCTCATTGGGTTGGTATGAGGCCTTTTGGAAAAGCTCAAGAACCATATGAAGTTTTTGGAAAAGCTTAAAGACCATATGAAGCCTTTTGGGAAAGCTCAAAGTAAAACTTTGAAAGCTTATACTCAAAGTGGACAATATCATACCAGACGTAATGTTAGAAATATTGGTTCCGGTAGGGATTACGAGTATTTGGTCTCAGGGAATTGAGTGTAAGACTAGTAGGTGGAAAAGAAAAGAAGGAACACACAAAAGAGGATAAGACGATAATGAAGTGAATAAGTGGCGGTCTTCTCTTGTCGCATTATCATTATCGAGAATCCCACTTTTACCAATTCTGTATGTTCTTTCTTCTCATCTTTTTAAACTAGCAAAATTAAACGTAATAGTTAGCCATATGATGTTGGTCATCTGTAAATCGTTCCACTCACGCCACGCTTCTTAGTTTTTTTGTTTGGTAATGTTGCGTGTCTCCAATTTATCATCTTAGCAGCCATAATAATGATAACTATAACAACAATTTAAGACTAAACATGTTTTTTAGGAACTGTATATTATTTTATGGTCAACATTACGAAGTTATCTGATTTTTGTTGTGATCATTTTGAACTGTAATAGGTGGGCAGAGAAGGACCAGGAAGTTCACCCACCCATCACCATTCTTATGAGGTATGAGTTCTTTTCTAAGTCTCTAAACTTTAGAATATTCTCCATCTTTGTGAAGTCTTTATCTTCCTTTCCTATTTCTTGTAGACCTCAACCCCACACATTACGCGTCCGACACTGACCCTCTTCAATTCTCCTTTTCATTTTTCTAGTACCAAAATTCCCACCAAAAAGCCACCCAATCTCAATCCTGTGTCCCAATGTTCACTCCACACACACACACGCACAGCGATTGCGACAACTAAAAAAGAACCCATGAAATTATGGGACTCCTGAAATCTGTTTGGTTCACTCACTGTGATCTGAAACTAAAACCCCACTTAGAGAGACTTTTCAAGGGCTTTGGGCTGTATATTTGGGCTTTAATTGTCCGCTTTTTAGTGGGCCTTTAATCCTCTGGTCCAATTTTCAAGCCCATTCATAATGCATGTAGGCCCAACACACCTTTTGAACACCTGAAAATTCTATAATTGATATAAAAATATAACAAAAATAGTAACTAAGAAGTTAACTTAAACATTTTAAACATACCCACAAAAATCACATACATATCCATGACCTTTTAGTTGAGTCGAAAATATATACCTAAACTTTGTTAGACAAACACAACTCTCCACAGTGAGATGATATTGTCCGCTTTGAGCATAAGCTCTCATAGCTTGGCCGCTTTGAGCATAAGCTCTCATAGCTTTGTTTTGGGTTTTCCAAAAGGTGAGATGATATTGTCCGCTTTGAGCATAAGCTCTCATAGCTTTGTTTTGGGTTCTCCAAAAGGTTCCATACCAATTGAGAGAGTATTCTTTAATTATAAACCTATTATCTTTCCCTAAATTAGCTGATGAACCGATGTGGGACTTTTATCATCCAACAAACTTGTCGGACAGAAAAAAAAGAAAGAAAAAAGAAACACAAAACTATATCATGAGTTATGTAAATAGTTGCCTCATTACAAAATTTCCAAGGACAACGTTGTTTTAGTTGCATTGGCATTTAAATCAAATGCACATATCACATAAAAACAACCTTAAAATAAATAAAGGGATTCAAGTGGGCTTCATGTCATAGAACAATGAAACCCACAATGAGTGATAATCATCGTCGGTTTCCATCCTCTCTCTATTACAACGACAGCAAATTTTTGGGCTTCCATCTCGTCCATCCAGCGGCCCAGATACTCTTGGGCTCCGGCTCGGTGGTATCAGCCTCATCATTCTCCCCTGCGGCGGTCCATTCAGCTTTGGGCTTCTACTCGAGGCCCAATCAGATACTCTCCCATCCAGAGGCCCAGATGACCTTGGGCTTCTTGGAAACATGGGCCTCTCTTTCCTATCCAACGGCCCAGATAGCTTTAGGCTTTTACTGTTCGTCATTAACTTCTCGTGCGTTCTCCCGTCCAACGGCCCGGACAGCGACACGTGTTTACTGCGTCGTTTCGGCGGCTTGAGCACCTCCTTAACCTCCAGTTTCCGGCTGAGATCCTCGCTGTAGGTAATCGGCTCTGGGGAAATCACCGCCGCGTCTTCCCGGAAAATCCCCTTCTCCGACTTGGCGTTGGTGAAAATAAGCTTCCTGAGGCAGTTCCGGAGGCAGTTCTTGGTCTTGGCGAAAGCGGAAAGGAGCAATTTCTTTTGGGTGGCTTCTTCTCTGTCGCATTTGGCGAGTTTCAGAATCTCGAGCCTGTGTTTGGCGATGGAAACTCCGATTTTCTGGAGAAAATCGTGGTTGAAACGAGGAATGTCTTCGGGTCTGAGGCCATTTCGGGCGAAAACGAGGCCATATTCGTAAGTGTGAAGTGGGTCGAGGCCAGTTCTTGAGAGCCAAGAGAACCAGTCCATCGGAGGTGGCCGACCAAGCTGAGAAATGCTCAAGAGTTTGGAAATTGTGACGTACATATATAGCGTGAGAGAGAGAGAGAGAGAGGGGAGGAGAGTGCAAAAAAAAAATAATAATAATAATAACAATAATAATAATTAAATGCGACCGGCTCCGCTCTTTTATTCTCGTCAATTATACATACATAAAATATTAATTATTTTAAAAATTCATAAATAAATTTATATATTTATATATAATGGATTAATTTTTTTGAATTTATTACCTTAAAGGGTAAAAAAATTGATGGTAAAATTAAATGGACCACAATAATAATTTCAGATGAGAGTGAGGGAAAGAGAGGGATATGGTGTAAAGATCCGTTGCTTTCGGTATGGATCAATTATTTATGTAATTTTGGAAGTATTTTGAACGTTGTATTACCATTATGTCCTCTTTAGTTTAGTTTTTTTCTTTTCTTCTTCTT

mRNA sequence

ATGGCGGTTTCTTCTAGAAGATCGAGCGGGCCTGTTATGAGGTCTCTCTCACCTTCTGGGAGATTCTGTGGCTCCTATTCTTCTTCTTCGTCTTCGTCTCCGTCTTCTTCGTCATCGGCGTTTGCGTCTTCCACATCAAGCTTTTCCACTGAAAACCCTACTTCGTTTTTCCGTAGATCTCTGTCTCCGTCTCGTGTTCATCTACAAGGTTCTTCTTCTTCTACGTCGGCGTCGTCCGTGAGATTTGCACTGGACCGGTCTATTTCTCCGAATCGGCATATCTCTGTTTTGACTCGTGGCGGTGGGAATCAAGTAGTGAAGAGGCAGAGCAACCAGAAGAGGACGTGCTTGTGCTCTCCGACCACGCATCCTGGTTCGTTTCGGTGTAGTCTCCATAAAGGCGTTCCGTCGCAGCCTACGACTCCTTACTCGTCTAATCGACTCAACGCGCGGAGATCGGCGATGACGAACTCTTTGAACACCTATGTTTGTTATTTTGTTCAACGTACACGTCTCCTTCCTTCTGCTGTCGCCTCCGTTCATGGTGGCCGTGAAATTGAAGCCGGTAATTTACGCATTCATGCTTGCCGTACTCCGTTTTGTCAATCGGATGATTTCTTAAAGATGCATTTGAAGGTTGAAACCTAAGAGCTCTGATTTTGAACTGTGAATTTTGTGATCTGAAAGTAAATTCAGGTGGAGATGATTCAAATTTGAATGAAGTTATGAACTAAGACAGACGATGGAATTCTTGACAGCGACTGAACAATTATAATTGGAATTAATTGGAAACAAATCCTGGAATTCAAAAAGGTAAATAACATCAGAGCTGAGATGAAGTTAGAATGGAATAGAAAAGAATCGAATGAAACATTGAATGGTAGGGTAACTCGGTGGTGCGGTGGAGTGGATGGTTGACCTGTCAAGGCTCAAATGGGTGGAAGGAACCGACTGCTATCTGCCTATGAAAAACCAATCCAAATCCCTATTGATTGTTCATAAAACTATTCAATGGAAGAATGCCCCTTTGAGAGATGAAGAGCTGCCTATGTCAGGAGATGTTACATCTTTTTTGCCGAAGGAAACTATGAAGGGATGGTTAAAAAGTGAAAGGAAATTCTGATTGAGATGGTTTCTCACGTTAACCCACAGGGAATGATCATGAATTTGCTCATTGGGTTGGTATGAGGCCTTTTGGAAAAGCTCAAGAACCATATGAAGTTTTTGGAAAAGCTTAAAGACCATATGAAGCCTTTTGGGAAAGCTCAAAGTAAAACTTTGAAAGCTTATACTCAAAGTGGACAATATCATACCAGACGTAATGTTAGAAATATTGGTTCCGGTAGGGATTACGAGTATTTGGTCTCAGGGAATTGAGTGTAAGACTAGTAGGTGGAAAAGAAAAGAAGGAACACACAAAAGAGGATAAGACGATAATGAAGTGAATAAGTGGCGGTCTTCTCTTGTCGCATTATCATTATCGAGAATCCCACTTTTACCAATTCTGTATGTTCTTTCTTCTCATCTTTTTAAACTAGCAAAATTAAACGTAATAGTTAGCCATATGATGTTGGTCATCTGTAAATCGTTCCACTCACGCCACGCTTCTTAGTTTTTTTGTTTGGTAATGTTGCGTGTCTCCAATTTATCATCTTAGCAGCCATAATAATGATAACTATAACAACAATTTAAGACTAAACATGTTTTTTAGGAACTGTATATTATTTTATGGTCAACATTACGAAGTTATCTGATTTTTGTTGTGATCATTTTGAACTGTAATAGGTGGGCAGAGAAGGACCAGGAAGTTCACCCACCCATCACCATTCTTATGAGGTATGAGTTCTTTTCTAAGTCTCTAAACTTTAGAATATTCTCCATCTTTGTGAAGTCTTTATCTTCCTTTCCTATTTCTTGTAGACCTCAACCCCACACATTACGCGTCCGACACTGACCCTCTTCAATTCTCCTTTTCATTTTTCTAGTACCAAAATTCCCACCAAAAAGCCACCCAATCTCAATCCTGTGTCCCAATGTTCACTCCACACACACACACGCACAGCGATTGCGACAACTAAAAAAGAACCCATGAAATTATGGGACTCCTGAAATCTGTTTGGTTCACTCACTGTGATCTGAAACTAAAACCCCACTTAGAGAGACTTTTCAAGGGCTTTGGGCTGTATATTTGGGCTTTAATTGTCCGCTTTTTAGTGGGCCTTTAATCCTCTGGTCCAATTTTCAAGCCCATTCATAATGCATGTAGGCCCAACACACCTTTTGAACACCTGAAAATTCTATAATTGATATAAAAATATAACAAAAATAGTAACTAAGAAGTTAACTTAAACATTTTAAACATACCCACAAAAATCACATACATATCCATGACCTTTTAGTTGAGTCGAAAATATATACCTAAACTTTGTTAGACAAACACAACTCTCCACAGTGAGATGATATTGTCCGCTTTGAGCATAAGCTCTCATAGCTTGGCCGCTTTGAGCATAAGCTCTCATAGCTTTGTTTTGGGTTTTCCAAAAGGTGAGATGATATTGTCCGCTTTGAGCATAAGCTCTCATAGCTTTGTTTTGGGTTCTCCAAAAGGTTCCATACCAATTGAGAGAGTATTCTTTAATTATAAACCTATTATCTTTCCCTAAATTAGCTGATGAACCGATGTGGGACTTTTATCATCCAACAAACTTGTCGGACAGAAAAAAAAGAAAGAAAAAAGAAACACAAAACTATATCATGAGTTATGTAAATAGTTGCCTCATTACAAAATTTCCAAGGACAACGTTGTTTTAGTTGCATTGGCATTTAAATCAAATGCACATATCACATAAAAACAACCTTAAAATAAATAAAGGGATTCAAGTGGGCTTCATGTCATAGAACAATGAAACCCACAATGAGTGATAATCATCGTCGGTTTCCATCCTCTCTCTATTACAACGACAGCAAATTTTTGGGCTTCCATCTCGTCCATCCAGCGGCCCAGATACTCTTGGGCTCCGGCTCGGTGGTATCAGCCTCATCATTCTCCCCTGCGGCGGTCCATTCAGCTTTGGGCTTCTACTCGAGGCCCAATCAGATACTCTCCCATCCAGAGGCCCAGATGACCTTGGGCTTCTTGGAAACATGGGCCTCTCTTTCCTATCCAACGGCCCAGATAGCTTTAGGCTTTTACTGTTCGTCATTAACTTCTCGTGCGTTCTCCCGTCCAACGGCCCGGACAGCGACACGTGTTTACTGCGTCGTTTCGGCGGCTTGAGCACCTCCTTAACCTCCAGTTTCCGGCTGAGATCCTCGCTGTAGGTAATCGGCTCTGGGGAAATCACCGCCGCGTCTTCCCGGAAAATCCCCTTCTCCGACTTGGCGTTGGTGAAAATAAGCTTCCTGAGGCAGTTCCGGAGGCAGTTCTTGGTCTTGGCGAAAGCGGAAAGGAGCAATTTCTTTTGGGTGGCTTCTTCTCTGTCGCATTTGGCGAGTTTCAGAATCTCGAGCCTGTGTTTGGCGATGGAAACTCCGATTTTCTGGAGAAAATCGTGGTTGAAACGAGGAATGTCTTCGGGTCTGAGGCCATTTCGGGCGAAAACGAGGCCATATTCGTAAGTGTGAAGTGGGTCGAGGCCAGTTCTTGAGAGCCAAGAGAACCAGTCCATCGGAGGTGGCCGACCAAGCTGAGAAATGCTCAAGAGTTTGGAAATTGTGACGTACATATATAGCGTGAGAGAGAGAGAGAGAGAGGGGAGGAGAGTGCAAAAAAAAAATAATAATAATAATAACAATAATAATAATTAAATGCGACCGGCTCCGCTCTTTTATTCTCGTCAATTATACATACATAAAATATTAATTATTTTAAAAATTCATAAATAAATTTATATATTTATATATAATGGATTAATTTTTTTGAATTTATTACCTTAAAGGGTAAAAAAATTGATGGTAAAATTAAATGGACCACAATAATAATTTCAGATGAGAGTGAGGGAAAGAGAGGGATATGGTGTAAAGATCCGTTGCTTTCGGTATGGATCAATTATTTATGTAATTTTGGAAGTATTTTGAACGTTGTATTACCATTATGTCCTCTTTAGTTTAGTTTTTTTCTTTTCTTCTTCTT

Coding sequence (CDS)

ATGGCGGTTTCTTCTAGAAGATCGAGCGGGCCTGTTATGAGGTCTCTCTCACCTTCTGGGAGATTCTGTGGCTCCTATTCTTCTTCTTCGTCTTCGTCTCCGTCTTCTTCGTCATCGGCGTTTGCGTCTTCCACATCAAGCTTTTCCACTGAAAACCCTACTTCGTTTTTCCGTAGATCTCTGTCTCCGTCTCGTGTTCATCTACAAGGTTCTTCTTCTTCTACGTCGGCGTCGTCCGTGAGATTTGCACTGGACCGGTCTATTTCTCCGAATCGGCATATCTCTGTTTTGACTCGTGGCGGTGGGAATCAAGTAGTGAAGAGGCAGAGCAACCAGAAGAGGACGTGCTTGTGCTCTCCGACCACGCATCCTGGTTCGTTTCGGTGTAGTCTCCATAAAGGCGTTCCGTCGCAGCCTACGACTCCTTACTCGTCTAATCGACTCAACGCGCGGAGATCGGCGATGACGAACTCTTTGAACACCTATGTTTGTTATTTTGTTCAACGTACACGTCTCCTTCCTTCTGCTGTCGCCTCCGTTCATGGTGGCCGTGAAATTGAAGCCGGTAATTTACGCATTCATGCTTGCCGTACTCCGTTTTGTCAATCGGATGATTTCTTAAAGATGCATTTGAAGGTTGAAACCTAA

Protein sequence

MAVSSRRSSGPVMRSLSPSGRFCGSYSSSSSSSPSSSSSAFASSTSSFSTENPTSFFRRSLSPSRVHLQGSSSSTSASSVRFALDRSISPNRHISVLTRGGGNQVVKRQSNQKRTCLCSPTTHPGSFRCSLHKGVPSQPTTPYSSNRLNARRSAMTNSLNTYVCYFVQRTRLLPSAVASVHGGREIEAGNLRIHACRTPFCQSDDFLKMHLKVET
Homology
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BLAST of Cp4.1LG18g05350 vs. NCBI nr
Match: KAG6589807.1 (hypothetical protein SDJN03_15230, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 296 bits (759), Expect = 6.91e-99
Identity = 180/236 (76.27%), Postives = 186/236 (78.81%), Query Frame = 0 

Query: 1   MAVSSRRSSGPVMRSLSPSGRFCGSYSSSSSSSPSSSSSAFASSTSSFSTENPTSFFRRS 60
           MAVSSR+SSGPVMRSLSPSGRFC SYSSSSSSS    SSAFASSTSSFSTENPTSFFRRS
Sbjct: 1   MAVSSRKSSGPVMRSLSPSGRFCRSYSSSSSSS----SSAFASSTSSFSTENPTSFFRRS 60

Query: 61  LSPSRVHLQGSSSSTSASSVRFALDRSISPNRHISVLTRGGGNQVVKRQSNQKRTCLCSP 120
           LSPSRVHLQGSSSSTSASSVRFALDRSISPNRHISVLTRGGGNQVVKRQSNQKRTCLCSP
Sbjct: 61  LSPSRVHLQGSSSSTSASSVRFALDRSISPNRHISVLTRGGGNQVVKRQSNQKRTCLCSP 120

Query: 121 TTHP--GSFRCSLHKGVP---------------SQPTTPYSSNRLNARRSAMTNS----L 180
           TTHP  G  R S+                    S      S+   + RRS    S     
Sbjct: 121 TTHPVKGVERISVRDRAGFRSCRKPMICDGKFGSTEVMDLSAGIQSWRRSMGIESGCLFS 180

Query: 181 NTYVCYFVQRTRLLPSAVASVHGGREIEAGNLRIHACRTPFCQSDDFLKMHLKVET 215
           NT VCYFV+RTRLLPSAVASVHGGREIEAGNLRIHACRTPFC+SDDFLKMHLKVET
Sbjct: 181 NTCVCYFVRRTRLLPSAVASVHGGREIEAGNLRIHACRTPFCRSDDFLKMHLKVET 232

[Close]
BLAST of Cp4.1LG18g05350 vs. NCBI nr
Match: XP_023516526.1 (putative protein TPRXL [Cucurbita pepo subsp. pepo])

HSP 1 Score: 288 bits (737), Expect = 6.54e-96
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0 

Query: 1   MAVSSRRSSGPVMRSLSPSGRFCGSYSSSSSSSPSSSSSAFASSTSSFSTENPTSFFRRS 60
           MAVSSRRSSGPVMRSLSPSGRFCGSYSSSSSSSPSSSSSAFASSTSSFSTENPTSFFRRS
Sbjct: 1   MAVSSRRSSGPVMRSLSPSGRFCGSYSSSSSSSPSSSSSAFASSTSSFSTENPTSFFRRS 60

Query: 61  LSPSRVHLQGSSSSTSASSVRFALDRSISPNRHISVLTRGGGNQVVKRQSNQKRTCLCSP 120
           LSPSRVHLQGSSSSTSASSVRFALDRSISPNRHISVLTRGGGNQVVKRQSNQKRTCLCSP
Sbjct: 61  LSPSRVHLQGSSSSTSASSVRFALDRSISPNRHISVLTRGGGNQVVKRQSNQKRTCLCSP 120

Query: 121 TTHPGSFRCSLHKGVPSQPTTPYSSNRLNARRSAMTNSL 159
           TTHPGSFRCSLHKGVPSQPTTPYSSNRLNARRSAMTNSL
Sbjct: 121 TTHPGSFRCSLHKGVPSQPTTPYSSNRLNARRSAMTNSL 159

[Close]
BLAST of Cp4.1LG18g05350 vs. NCBI nr
Match: KAG7023479.1 (hypothetical protein SDJN02_14504, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 276 bits (705), Expect = 5.17e-91
Identity = 156/161 (96.89%), Postives = 157/161 (97.52%), Query Frame = 0 

Query: 1   MAVSSRRSSGPVMRSLSPSGRFCGSYSSSSSSSPSSSSS--AFASSTSSFSTENPTSFFR 60
           MAVSSR+SSGPVMRSLSPSGRFC SYSSSSSSS SSSSS  AFASSTSSFSTENPTSFFR
Sbjct: 1   MAVSSRKSSGPVMRSLSPSGRFCRSYSSSSSSSSSSSSSSSAFASSTSSFSTENPTSFFR 60

Query: 61  RSLSPSRVHLQGSSSSTSASSVRFALDRSISPNRHISVLTRGGGNQVVKRQSNQKRTCLC 120
           RSLSPSRVHLQGSSSSTSASSVRFALDRSISPNRHISVLTRGGGNQVVKRQSNQKRTCLC
Sbjct: 61  RSLSPSRVHLQGSSSSTSASSVRFALDRSISPNRHISVLTRGGGNQVVKRQSNQKRTCLC 120

Query: 121 SPTTHPGSFRCSLHKGVPSQPTTPYSSNRLNARRSAMTNSL 159
           SPTTHPGSFRCSLHKGVPSQPTTPYSSNRLNARRSAMTNSL
Sbjct: 121 SPTTHPGSFRCSLHKGVPSQPTTPYSSNRLNARRSAMTNSL 161

[Close]
BLAST of Cp4.1LG18g05350 vs. NCBI nr
Match: XP_022960906.1 (uncharacterized protein LOC111461568 [Cucurbita moschata])

HSP 1 Score: 274 bits (701), Expect = 1.90e-90
Identity = 155/159 (97.48%), Postives = 156/159 (98.11%), Query Frame = 0 

Query: 1   MAVSSRRSSGPVMRSLSPSGRFCGSYSSSSSSSPSSSSSAFASSTSSFSTENPTSFFRRS 60
           MAVSSR+SSGPVMRSLSPSGRFC SYSSSSSSS SSSS AFASSTSSFSTENPTSFFRRS
Sbjct: 1   MAVSSRKSSGPVMRSLSPSGRFCRSYSSSSSSSFSSSS-AFASSTSSFSTENPTSFFRRS 60

Query: 61  LSPSRVHLQGSSSSTSASSVRFALDRSISPNRHISVLTRGGGNQVVKRQSNQKRTCLCSP 120
           LSPSRVHLQGSSSSTSASSVRFALDRSISPNRHISVLTRGGGNQVVKRQSNQKRTCLCSP
Sbjct: 61  LSPSRVHLQGSSSSTSASSVRFALDRSISPNRHISVLTRGGGNQVVKRQSNQKRTCLCSP 120

Query: 121 TTHPGSFRCSLHKGVPSQPTTPYSSNRLNARRSAMTNSL 159
           TTHPGSFRCSLHKGVPSQPTTPYSSNRLNARRSAMTNSL
Sbjct: 121 TTHPGSFRCSLHKGVPSQPTTPYSSNRLNARRSAMTNSL 158

[Close]
BLAST of Cp4.1LG18g05350 vs. NCBI nr
Match: XP_022987874.1 (uncharacterized serine-rich protein C215.13-like [Cucurbita maxima] >XP_022987875.1 uncharacterized serine-rich protein C215.13-like [Cucurbita maxima])

HSP 1 Score: 267 bits (683), Expect = 1.07e-87
Identity = 153/160 (95.62%), Postives = 154/160 (96.25%), Query Frame = 0 

Query: 1   MAVSSRRSSGPVMRSLSPSGRFCGSYSSSSSSSPSSSSS-AFASSTSSFSTENPTSFFRR 60
           MAVSSR+SSGP MRSLSPSGRFCG YSSSSSSS SSSSS AFASSTSSFSTENPTSFFRR
Sbjct: 1   MAVSSRKSSGPAMRSLSPSGRFCGFYSSSSSSSSSSSSSSAFASSTSSFSTENPTSFFRR 60

Query: 61  SLSPSRVHLQGSSSSTSASSVRFALDRSISPNRHISVLTRGGGNQVVKRQSNQKRTCLCS 120
           SLSPSRVHLQGSSS TSASSVRFALDRSISPNRHISVLTRG GNQVVKRQSNQKRTCLCS
Sbjct: 61  SLSPSRVHLQGSSS-TSASSVRFALDRSISPNRHISVLTRGSGNQVVKRQSNQKRTCLCS 120

Query: 121 PTTHPGSFRCSLHKGVPSQPTTPYSSNRLNARRSAMTNSL 159
           PTTHPGSFRCSLHKGVPSQPTTPYSSNRLNARRSAMTNSL
Sbjct: 121 PTTHPGSFRCSLHKGVPSQPTTPYSSNRLNARRSAMTNSL 159

[Close]
BLAST of Cp4.1LG18g05350 vs. ExPASy TrEMBL
Match: A0A6J1H8W9 (uncharacterized protein LOC111461568 OS=Cucurbita moschata OX=3662 GN=LOC111461568 PE=4 SV=1)

HSP 1 Score: 274 bits (701), Expect = 9.18e-91
Identity = 155/159 (97.48%), Postives = 156/159 (98.11%), Query Frame = 0 

Query: 1   MAVSSRRSSGPVMRSLSPSGRFCGSYSSSSSSSPSSSSSAFASSTSSFSTENPTSFFRRS 60
           MAVSSR+SSGPVMRSLSPSGRFC SYSSSSSSS SSSS AFASSTSSFSTENPTSFFRRS
Sbjct: 1   MAVSSRKSSGPVMRSLSPSGRFCRSYSSSSSSSFSSSS-AFASSTSSFSTENPTSFFRRS 60

Query: 61  LSPSRVHLQGSSSSTSASSVRFALDRSISPNRHISVLTRGGGNQVVKRQSNQKRTCLCSP 120
           LSPSRVHLQGSSSSTSASSVRFALDRSISPNRHISVLTRGGGNQVVKRQSNQKRTCLCSP
Sbjct: 61  LSPSRVHLQGSSSSTSASSVRFALDRSISPNRHISVLTRGGGNQVVKRQSNQKRTCLCSP 120

Query: 121 TTHPGSFRCSLHKGVPSQPTTPYSSNRLNARRSAMTNSL 159
           TTHPGSFRCSLHKGVPSQPTTPYSSNRLNARRSAMTNSL
Sbjct: 121 TTHPGSFRCSLHKGVPSQPTTPYSSNRLNARRSAMTNSL 158

[Close]
BLAST of Cp4.1LG18g05350 vs. ExPASy TrEMBL
Match: A0A6J1JI11 (uncharacterized serine-rich protein C215.13-like OS=Cucurbita maxima OX=3661 GN=LOC111485282 PE=4 SV=1)

HSP 1 Score: 267 bits (683), Expect = 5.19e-88
Identity = 153/160 (95.62%), Postives = 154/160 (96.25%), Query Frame = 0 

Query: 1   MAVSSRRSSGPVMRSLSPSGRFCGSYSSSSSSSPSSSSS-AFASSTSSFSTENPTSFFRR 60
           MAVSSR+SSGP MRSLSPSGRFCG YSSSSSSS SSSSS AFASSTSSFSTENPTSFFRR
Sbjct: 1   MAVSSRKSSGPAMRSLSPSGRFCGFYSSSSSSSSSSSSSSAFASSTSSFSTENPTSFFRR 60

Query: 61  SLSPSRVHLQGSSSSTSASSVRFALDRSISPNRHISVLTRGGGNQVVKRQSNQKRTCLCS 120
           SLSPSRVHLQGSSS TSASSVRFALDRSISPNRHISVLTRG GNQVVKRQSNQKRTCLCS
Sbjct: 61  SLSPSRVHLQGSSS-TSASSVRFALDRSISPNRHISVLTRGSGNQVVKRQSNQKRTCLCS 120

Query: 121 PTTHPGSFRCSLHKGVPSQPTTPYSSNRLNARRSAMTNSL 159
           PTTHPGSFRCSLHKGVPSQPTTPYSSNRLNARRSAMTNSL
Sbjct: 121 PTTHPGSFRCSLHKGVPSQPTTPYSSNRLNARRSAMTNSL 159

[Close]
BLAST of Cp4.1LG18g05350 vs. ExPASy TrEMBL
Match: A0A6J1C124 (uncharacterized protein DDB_G0271670-like OS=Momordica charantia OX=3673 GN=LOC111007469 PE=4 SV=1)

HSP 1 Score: 237 bits (605), Expect = 3.59e-76
Identity = 136/159 (85.53%), Postives = 146/159 (91.82%), Query Frame = 0 

Query: 1   MAVSSRRSSGPVMRSLSPSGRFCGSYSSSSSSSPSSSSSAFASSTSSFSTENPTSFFRRS 60
           MAVSSR+SSGPV+RSLSPSGRF  SYSSSSSSS SSSSSAFASSTS+FST N TSFFRRS
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYASYSSSSSSSSSSSSSAFASSTSTFSTRNATSFFRRS 60

Query: 61  LSPSRVHLQGSSSSTSASSVRFALDRSISPNRHISVLTRGGGNQVVKRQSNQKRTCLCSP 120
            SP+RV+LQGSSS  SASSVRF+LDRSISPNR +SVLTR  G+QVVKRQ NQKRTC+CSP
Sbjct: 61  TSPTRVNLQGSSS-PSASSVRFSLDRSISPNRPLSVLTRSSGSQVVKRQGNQKRTCMCSP 120

Query: 121 TTHPGSFRCSLHKGVPSQPTTPYSSNRLNARRSAMTNSL 159
           TTHPGSFRCSLHKG PSQP+TPYSSNRLNARRSAMTNSL
Sbjct: 121 TTHPGSFRCSLHKGHPSQPSTPYSSNRLNARRSAMTNSL 158

[Close]
BLAST of Cp4.1LG18g05350 vs. ExPASy TrEMBL
Match: A0A6J1HNK6 (uncharacterized protein LOC111465917 OS=Cucurbita maxima OX=3661 GN=LOC111465917 PE=4 SV=1)

HSP 1 Score: 229 bits (584), Expect = 4.71e-73
Identity = 135/159 (84.91%), Postives = 143/159 (89.94%), Query Frame = 0 

Query: 1   MAVSSRRSSGPVMRSLSPSGRFCGSYSSSSSSSPSSSSSAFASSTSSFSTENPTSFFRRS 60
           MAVSSR+SSGPV+RSLSPSGRF GSYSSS     SS SSAFASSTSSFST NPT FFRRS
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSS----MSSGSSAFASSTSSFSTRNPT-FFRRS 60

Query: 61  LSPSRVHLQGSSSSTSASSVRFALDRSISPNRHISVLTRGGGNQVVKRQSNQKRTCLCSP 120
           +SPSR++LQ SSS  SASSVRF+LDRSISPNR ISV TR  GNQVVKRQSNQKRTC+CSP
Sbjct: 61  VSPSRINLQPSSS-PSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSP 120

Query: 121 TTHPGSFRCSLHKGVPSQPTTPYSSNRLNARRSAMTNSL 159
           TTHPGSFRCSLHKGVPSQP+TPYSSNRLNARRSAMTNSL
Sbjct: 121 TTHPGSFRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSL 153

[Close]
BLAST of Cp4.1LG18g05350 vs. ExPASy TrEMBL
Match: A0A6J1F5M8 (uncharacterized protein LOC111441057 OS=Cucurbita moschata OX=3662 GN=LOC111441057 PE=4 SV=1)

HSP 1 Score: 229 bits (584), Expect = 4.71e-73
Identity = 135/159 (84.91%), Postives = 143/159 (89.94%), Query Frame = 0 

Query: 1   MAVSSRRSSGPVMRSLSPSGRFCGSYSSSSSSSPSSSSSAFASSTSSFSTENPTSFFRRS 60
           MAVSSR+SSGPV+RSLSPSGRF GSYSSS     SS SSAFASSTSSFST NPT FFRRS
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSS----MSSGSSAFASSTSSFSTRNPT-FFRRS 60

Query: 61  LSPSRVHLQGSSSSTSASSVRFALDRSISPNRHISVLTRGGGNQVVKRQSNQKRTCLCSP 120
           +SPSR++LQ SSS  SASSVRF+LDRSISPNR ISV TR  GNQVVKRQSNQKRTC+CSP
Sbjct: 61  VSPSRINLQPSSS-PSASSVRFSLDRSISPNRPISVSTRISGNQVVKRQSNQKRTCMCSP 120

Query: 121 TTHPGSFRCSLHKGVPSQPTTPYSSNRLNARRSAMTNSL 159
           TTHPGSFRCSLHKGVPSQP+TPYSSNRLNARRSAMTNSL
Sbjct: 121 TTHPGSFRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSL 153

[Close]
BLAST of Cp4.1LG18g05350 vs. TAIR 10
Match: AT5G11090.1 (serine-rich protein-related )

HSP 1 Score: 114.0 bits (284), Expect = 1.5e-25
Identity = 89/173 (51.45%), Postives = 108/173 (62.43%), Query Frame = 0 

Query: 4   SSRRSSGPVMRSLSPSGRFCGSYSSSSSSSPSSSSSAFASSTSSFSTENPTSFF------ 63
           S  +S+GPV+RS SPSGRFCG Y   S + PSSSSSAFASSTSS  +   ++FF      
Sbjct: 6   SRTKSNGPVLRSQSPSGRFCGGY---SRAVPSSSSSAFASSTSSSFSSPSSAFFSNHRHH 65

Query: 64  ------RRSLSPSRVHLQGSSSSTSASSVRFALD-RSISP-NRHISVLTRGGGNQVVKRQ 123
                  RS SP+RV+L   ++   + S R++LD RSISP N+ ISV      NQ     
Sbjct: 66  ESNHSHHRSASPTRVNLY--TAQPMSQSFRYSLDSRSISPTNKSISV----SKNQPPSHN 125

Query: 124 SNQKRTCLCSPTTHPGSFRCSLHKGVPS---QPTTPYSSNRLNARRSAMTNSL 160
               R C+CSPTTHPGSFRCSLHK V +   Q T  Y++N LN RRSAMTNSL
Sbjct: 126 HKISRRCMCSPTTHPGSFRCSLHKNVANPHGQGTASYTTNGLNMRRSAMTNSL 169

[Close]
BLAST of Cp4.1LG18g05350 vs. TAIR 10
Match: AT5G25280.1 (serine-rich protein-related )

HSP 1 Score: 108.2 bits (269), Expect = 8.2e-24
Identity = 88/177 (49.72%), Postives = 111/177 (62.71%), Query Frame = 0 

Query: 1   MAVSSRRSS----GPVMRSLSPSGRFCGSYSSSSSSSPSSSSSAFASSTSSFSTENPTSF 60
           MA++S R++       +RS SPSGRFCG YS+   SS S SSS FASSTSS  +   T+F
Sbjct: 1   MAITSSRTTRSNGSASLRSKSPSGRFCGVYSNRMPSS-SPSSSGFASSTSSSFSSPSTAF 60

Query: 61  F----------RRSLSPSRVHLQGSSSSTSASSVRFALD-RSISPNRHISVLTRGGGNQV 120
           F           RS SP+RV+L  S+  T   S R+++D RSISPNR I+V +    N  
Sbjct: 61  FSSHNQNNHHQHRSASPTRVNLFTSAPMT--QSFRYSIDNRSISPNRSIAVSSNKPSNH- 120

Query: 121 VKRQSNQKRTCLCSPTTHPGSFRCSLHKGVPS---QPTTPYSSNRLNARRSAMTNSL 160
             +  + +R C+CSPTTHPGSFRCSLHK V +   Q T  Y++N LN RRSAMTNSL
Sbjct: 121 -HKIPDSRRRCMCSPTTHPGSFRCSLHKNVANPHGQGTASYTTNGLNMRRSAMTNSL 172

[Close]
BLAST of Cp4.1LG18g05350 vs. TAIR 10
Match: AT5G25280.2 (serine-rich protein-related )

HSP 1 Score: 108.2 bits (269), Expect = 8.2e-24
Identity = 88/177 (49.72%), Postives = 111/177 (62.71%), Query Frame = 0 

Query: 1   MAVSSRRSS----GPVMRSLSPSGRFCGSYSSSSSSSPSSSSSAFASSTSSFSTENPTSF 60
           MA++S R++       +RS SPSGRFCG YS+   SS S SSS FASSTSS  +   T+F
Sbjct: 1   MAITSSRTTRSNGSASLRSKSPSGRFCGVYSNRMPSS-SPSSSGFASSTSSSFSSPSTAF 60

Query: 61  F----------RRSLSPSRVHLQGSSSSTSASSVRFALD-RSISPNRHISVLTRGGGNQV 120
           F           RS SP+RV+L  S+  T   S R+++D RSISPNR I+V +    N  
Sbjct: 61  FSSHNQNNHHQHRSASPTRVNLFTSAPMT--QSFRYSIDNRSISPNRSIAVSSNKPSNH- 120

Query: 121 VKRQSNQKRTCLCSPTTHPGSFRCSLHKGVPS---QPTTPYSSNRLNARRSAMTNSL 160
             +  + +R C+CSPTTHPGSFRCSLHK V +   Q T  Y++N LN RRSAMTNSL
Sbjct: 121 -HKIPDSRRRCMCSPTTHPGSFRCSLHKNVANPHGQGTASYTTNGLNMRRSAMTNSL 172

[Close]
BLAST of Cp4.1LG18g05350 vs. TAIR 10
Match: AT1G67910.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1); Has 167 Blast hits to 167 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.9 bits (115), Expect = 5.9e-06
Identity = 21/48 (43.75%), Postives = 28/48 (58.33%), Query Frame = 0 

Query: 93  HISVLTRGGGNQVVKRQSNQKRTCLCSPTTHPGSFRCSLHKGVPSQPT 141
           H +     G   + ++ S  K  CLCSPTTHPGSFRC +H+ +  Q T
Sbjct: 21  HFNSAVEVGSRGLSRQTSMTKTNCLCSPTTHPGSFRCRIHRSLSLQRT 68

[Close]
BLAST of Cp4.1LG18g05350 vs. TAIR 10
Match: AT1G67910.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1). )

HSP 1 Score: 48.9 bits (115), Expect = 5.9e-06
Identity = 21/48 (43.75%), Postives = 28/48 (58.33%), Query Frame = 0 

Query: 93  HISVLTRGGGNQVVKRQSNQKRTCLCSPTTHPGSFRCSLHKGVPSQPT 141
           H +     G   + ++ S  K  CLCSPTTHPGSFRC +H+ +  Q T
Sbjct: 21  HFNSAVEVGSRGLSRQTSMTKTNCLCSPTTHPGSFRCRIHRSLSLQRT 68

The following BLAST results are available for this feature:
BLAST of Cp4.1LG18g05350 vs.
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG18g05350 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6589807.16.91e-9976.27hypothetical protein SDJN03_15230, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023516526.16.54e-96100.00putative protein TPRXL [Cucurbita pepo subsp. pepo][more]
KAG7023479.15.17e-9196.89hypothetical protein SDJN02_14504, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022960906.11.90e-9097.48uncharacterized protein LOC111461568 [Cucurbita moschata][more]
XP_022987874.11.07e-8795.63uncharacterized serine-rich protein C215.13-like [Cucurbita maxima] >XP_02298787... [more]
BLAST of Cp4.1LG18g05350 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1H8W99.18e-9197.48uncharacterized protein LOC111461568 OS=Cucurbita moschata OX=3662 GN=LOC1114615... [more]
A0A6J1JI115.19e-8895.63uncharacterized serine-rich protein C215.13-like OS=Cucurbita maxima OX=3661 GN=... [more]
A0A6J1C1243.59e-7685.53uncharacterized protein DDB_G0271670-like OS=Momordica charantia OX=3673 GN=LOC1... [more]
A0A6J1HNK64.71e-7384.91uncharacterized protein LOC111465917 OS=Cucurbita maxima OX=3661 GN=LOC111465917... [more]
A0A6J1F5M84.71e-7384.91uncharacterized protein LOC111441057 OS=Cucurbita moschata OX=3662 GN=LOC1114410... [more]
BLAST of Cp4.1LG18g05350 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G11090.11.5e-2551.45serine-rich protein-related [more]
AT5G25280.18.2e-2449.72serine-rich protein-related [more]
AT5G25280.28.2e-2449.72serine-rich protein-related [more]
AT1G67910.15.9e-0643.75unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G67910.25.9e-0643.75unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..55
NoneNo IPR availablePANTHERPTHR33132OSJNBB0118P14.9 PROTEINcoord: 1..159
NoneNo IPR availablePANTHERPTHR33132:SF75SUBFAMILY NOT NAMEDcoord: 1..159

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG18g05350.1Cp4.1LG18g05350.1mRNA