Cp4.1LG18g04670 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG18g04670
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	zinc finger CCCH domain-containing protein 34-like isoform X1
Location	Cp4.1LG18: 5674884 .. 5679736 (+)
RNA-Seq Expression	Cp4.1LG18g04670
Synteny	Cp4.1LG18g04670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTGTAGCCTCTCGTGGTAAAAACCAGTTAGTGTTGCTGTATCAGTTGCAAGCAGGCCAATCCGGACATTGCTACCTGCTTCAAGTTGCTTAAGCTTAGCCTTATTAAGCTCCCTAGCTACACAATCTCCGACGTGAAGGAAAGGTAATTTGCAGCTCTCAGATGTGTCACCAAGCCACCTATGTGAAAGATGGCAAGGTGTAATTAGGCATCGAGCTCCCGACTGCTCGAGAAACGCCGTTTTCTGCTTCAAATTCTCGATGATCATGGCATCACTATGAGGAATTCCCTTGTCTAATACTGGATCGCTGCAGACAACAAAAGGTATGCTCTCTTCTCCATCCTTCCTACTCCACCAAACGAGCTTTTCCATGAAAAGTAGAGTGGAAAAAACCGACACTCCCCCTATGACACCCACAGTGTTTGGCTGGACAAGAAGGGGCTTAAGAGTTCGAGTTTTCGACAGAGATTTTCCCGAACTCGACATCTTCTTGGATGCTGCTAAGTTGTCATTCTCATCAGTTTGAATAACAGAAAAGATCTGTACAGATAAATACAGGTTTAATCTCCTTCTAAAGCGAAAAATGCTCTCGTTGGCATTTCGTCGAACACCTGCTGGGCAATTCAATGCATAAAATGACATAGCCATACCACCATCAAGCATCATTTACGCAAAGAGCAAGAACTTCAGTGTGATTCAACTCGACATTCAAGGCGTTGAATCAACAGAGACGAAAAGCAACAATCATTGCAGACTACAGCTTGCAGACTATAGCGAAAAATGGTGTCGAGCAAAACCAGGTAAGACATGAAAAGAAGCTTACATTATTGAAAATCTGTCATATCTAAGCTTCTTCTCAGCAGTGAAACGCTGTCAGCCGTTGAAGAGAAGAACGACAAAAATGGAGGGATCGAGGAGGTGGGGCAGAGCACCGGATAGAATCACTCTGCTTTCAAAGCCCTCCAATCCCCTTCTCACACCATACTCAATTTTTTTATTTTTTGTTCTTAAAAATTAAAATTTTAAATACTTTTTATTCATCTTTGTTAAATTAATGTGTACAAAAAAGCGAATTGGAAAATGGGTATTTGGTTATTTAATTTAAAATGATCTCCGCCATGTAAAATAAAAAAAGGAATTGAAAATTGAATTCCATGGAAGGCCGTCTATGACGATGATTTTGTTGCTGCTCTTCCACTTCTCTTACGCTCTCTCTTCTTCTTCTTCTTCCAATTCCTTCTGAGAAGAACACCAATGGGGGAAGATTTGCGTAAACGTAACACTGATTGCGTCTATTTCTTGGCTTCACCTCTTACCTGCAAGAAGGTCAGCATTTCTTGCTTAATAAACAATAATCGTACCCCTTTTCACGTTACAATTCCTTCTCGATGTAAACACCGGGGAATTTGGCTCATGCTTCCGTTATCTTATCACTACTGTGAGGATCTTGCTCTGCATTTGAAGGATTTTTTGTTGCATTCCGTCGAAATGCATCGGCATGATTATGTGTTTGAATTTACGCTGTCGATCATTAGATTTCTCGGTTTTAATGTGGAATCGGGTTTACGTGTTTATGTTTATGCATCGGCAACTGTTTTTTTTTTTTTCAGGGTTTTGATTGCGAGTATCGGCACAGCGAGATTGCTAGGCTGAACCCTAGAGATTGTTACTACTGGCTGGCGGGAAACTGCTTGAATGCAGCCTGTGGTTTTCGGCATCCGGTAAGCTGATTATCTGTTTGTTAATATTCACCTGAGCTTGGTTGCAGTCGGTGGCTGGTTCATCTACCTTGTTTATACATGTTTAGCAATGAAACTTGTTTGGTCTGAACACTTTCTTTGAATCCTCCAAGACTAAATTTAGGTTGAATTTACTGCCATTTTGTTGAAATTCTTTTCCTGGTTCTCAAGTTTGCATATGCCCTGTTCTGCTTTTGCTTGAAGGCTCAATCCCCATAGCTTTGGTATCTGTAATCACAAATTTGTGCATGTCAGGATGCAACTAAGAACATAGTTTTTTGTTTTGTAAATTTCATTTTGGAATGTAAGTTGTTTGGAAAGCAAGCAATGTTCTAGAGAATGTATTGTGTTAATTTAAGACATAAATTGAGGAAGTGATACTGTTTTTGGTTACTTTGTCCCGCATAAGGAGGATTGTGAGATCCCACATCGGTTGGGAGGAGAACAAAACATTCTTTATAAGGGTGTGGAAACCTCTCCTTAGCGTGTTTTAAAAACCTTGAGGGAAGCCCAAAAGTGAAATCCCAAAGAGAACAATATCTCGGTTGGGGAGGAGAACGAAACATTCTTTTTAAGGGTGTGGAAACCTCTCCCTAGCGTGTTTTAAAAACCTTGAGGGGAAGCCTGAAAGTGAAACCCCAAAGAGAACAATATCTCGGTTGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCGTGTTTTAAAAACCTTGAGGGGAAGCCTGAAAGTGAAACCCCAAAGAGAACAATATCTCGGTTGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCGTGTTTTAAAAACCTTGAGGGGAAGCCTGAAAGTGAAACCCCAAAGAGAACAATATCTCGGTTGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCGTGTTTTAAAAACCTTGAGGGGAAGCCCGAAAGTGAAACCCCAAAGAGAACAATATCTCGGTTGGGGAAGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCCTGTTTTAAAAATCTTGAGGGGAAGCCTGAAAGTGAAAGCCCAAAGAGAACAATATCTCGGTTGGGGAGGAGAACGAAACATTCTTTATAAGAGTGTGGAAACCTCTCCCTAACGTGTTTTAAAAACCTTGAGAGGAAGTCCGAAAGTGAAACCCCAAAGATAACAATATCTGCTAGGTGTGAACTTGGGCCGTTACACAAAGAATCTCATGCATTTGTTACAAATGCAAATATTATAATGTTTTGTTGATCTTGTTCTAGGTGGTGAACACAAGTAATAATAGGAACCTGTTGATAGTTTTGATATGAACTTTTCCCCTTACCTTGTGATTATCAATTTAAGTTGATGGTCTTCTAGGAACTTTATCATGCTCTCATTATGAAACACCATTGTGTTTAAAATTTTTCTTTTTCTTTTTCTCCTTAGCCAATGGATAGTCCTGCTGGAACAGTGTTAGAATCTTCTCAATGTTCTGTACCTGTGAACAAGACGATCATTCCCTGTTATTTTTATTTCAATGGCTGCTGCAGTAAAGGTGATACATGCTCATTTTTGCATGCCAATGATATTTCTCTTGCTACAAGATCTACAAAGACAGTATTTCCTAGTGGCAACGCGTCGTCCTCTGAAGATAAAACAGCTTCAGGAAACAAAAAAGGACTAGCCTCTACCGACGCAGATGCATTTCTTCATCCATCGAAGAACGTAGCTGGTCCGAAAATTGATGTTACATTTCAATGCTCGAGTCTCGGTCAACCTTCTGAAAATGTTTCACATCAAAGTGCCTCTGCGAAGATCTTGTTGCTTGAGTGTGAAAAAGTGGCTGTTGATGAGCTTGTCTCCTCGTCTCCAGCTGTGGGATCTAATGACAGTACATCTCATGTACATGCTGTTGCAGATCAGAGTTATGAGGAGCCGATGACGGACAGTACTGAGGAAGGCAACCTATCCCCTGGCTTTGACGTCGTCGTCGGTGATGGGTCGGGGAATTTGGCTAGCCACGATGAGCCAGAGTACATCCTGTCAACGAATCTGGAACAAAGAGAACTGGATACTGGATTGTGCAGGGAAAATTTTGAAGACCATATTGCCTATGAGCCAATGCATTCTGATTTAGAACTTCTTTATGAACATGAGATGCACTCATACAACCACTTAGAGACCGAACCTGTTCTTTTCAATGACAGAAACATCATCAGCTGTCCGAGAGGGAAACTCATCAAGTCCATGTTTTCTCAAAAGAAAAGGCTCACGCTCGTGAATCTAGATTCGGAGGAATGGAACCATGCCGACCTTCGAAGCTATCTGCAGAGAGACAGCGTTTCTGGTAACCGTTCGATTGTTAGTTTATCAAGGAGAAGAAATCGATTGTCGTGTCGAATGAGTGGAAACTTTGTGAAACCTCGGAAGCCTGGTTTGTATCAACCACCCCTTGGAAGAAGACTAGCATTACAGGTCGGGAAGATTTCTAGAGGATCACCTCCAGAAAACATAACCTTTTCAAATGGTTTTAGTCAATATGGATCATTTAGACACTCAAGACAACACAGACCCTGCGGTCACTACGACGAATACGCTCCGACCAGACCACAACAAACATTGTTAAACATGTCAAGAAAATCCATCTCGAGGGAACCTGTCGTAAGGGATCATGGATTCAATCCGAAGTCAGTTCCATTCAAAGGACCGAAAACCCTTTCGCAGATCAAAGAAGAGAAGCGAAAAGTAGAAGAAAATGGAGGGTTCTCAATCGAAAAACGTCGTTCCATCGGAGCTGCATCATCTTCAACCAACTTTAGAGGACCAAAACCTTTGAGTGATATCCTGAAAGACAAAAGGAAGGTGGAGGAGGAGGAGGAGGAGGAGCTGGTGAAGGAAATGAATAGCAACCATATATTGCTTTAGTTAGCGTTAGCTGAAACAGAAGCTCAACTTGAGTGTCTATGGCGGCTTTGCCATTCTTTTAACGGTCTTCATTTAGTATTTGACTGTATGCATCTGATATTAGTGTTTTAGGTTGTAAATAGTCAAATAATATAATAATTATTTTTTTTAAA

mRNA sequence

TTTTGTAGCCTCTCGTGGTAAAAACCAGTTAGTGTTGCTGTATCAGTTGCAAGCAGGCCAATCCGGACATTGCTACCTGCTTCAAGTTGCTTAAGCTTAGCCTTATTAAGCTCCCTAGCTACACAATCTCCGACGTGAAGGAAAGGTAATTTGCAGCTCTCAGATGTGTCACCAAGCCACCTATGTGAAAGATGGCAAGGTGTAATTAGGCATCGAGCTCCCGACTGCTCGAGAAACGCCGTTTTCTGCTTCAAATTCTCGATGATCATGGCATCACTATGAGGAATTCCCTTGTCTAATACTGGATCGCTGCAGACAACAAAAGGTATGCTCTCTTCTCCATCCTTCCTACTCCACCAAACGAGCTTTTCCATGAAAAGTAGAGTGGAAAAAACCGACACTCCCCCTATGACACCCACAGTGTTTGGCTGGACAAGAAGGGGCTTAAGAGTTCGAGTTTTCGACAGAGATTTTCCCGAACTCGACATCTTCTTGGATGCTGCTAAGTTGTCATTCTCATCAGTTTGAATAACAGAAAAGATCTGTACAGATAAATACAGGTTTAATCTCCTTCTAAAGCGAAAAATGCTCTCGTTGGCATTTCGTCGAACACCTGCTGGGCAATTCAATGCATAAAATGACATAGCCATACCACCATCAAGCATCATTTACGCAAAGAGCAAGAACTTCAGTGTGATTCAACTCGACATTCAAGGCGTTGAATCAACAGAGACGAAAAGCAACAATCATTGCAGACTACAGCTTGCAGACTATAGCGAAAAATGGTGTCGAGCAAAACCAGGTAAGACATGAAAAGAAGCTTACATTATTGAAAATCTGTCATATCTAAGCTTCTTCTCAGCAGTGAAACGCTGTCAGCCGTTGAAGAGAAGAACGACAAAAATGGAGGGATCGAGGAGGTGGGGCAGAGCACCGGATAGAATCACTCTGCTTTCAAAGCCCTCCAATCCCCTTCTCACACCATACTCAATTTTTTTATTTTTTGTTCTTAAAAATTAAAATTTTAAATACTTTTTATTCATCTTTGTTAAATTAATGTGTACAAAAAAGCGAATTGGAAAATGGGTATTTGGTTATTTAATTTAAAATGATCTCCGCCATGTAAAATAAAAAAAGGAATTGAAAATTGAATTCCATGGAAGGCCGTCTATGACGATGATTTTGTTGCTGCTCTTCCACTTCTCTTACGCTCTCTCTTCTTCTTCTTCTTCCAATTCCTTCTGAGAAGAACACCAATGGGGGAAGATTTGCGTAAACGTAACACTGATTGCGTCTATTTCTTGGCTTCACCTCTTACCTGCAAGAAGGGTTTTGATTGCGAGTATCGGCACAGCGAGATTGCTAGGCTGAACCCTAGAGATTGTTACTACTGGCTGGCGGGAAACTGCTTGAATGCAGCCTGTGGTTTTCGGCATCCGCCAATGGATAGTCCTGCTGGAACAGTGTTAGAATCTTCTCAATGTTCTGTACCTGTGAACAAGACGATCATTCCCTGTTATTTTTATTTCAATGGCTGCTGCAGTAAAGGTGATACATGCTCATTTTTGCATGCCAATGATATTTCTCTTGCTACAAGATCTACAAAGACAGTATTTCCTAGTGGCAACGCGTCGTCCTCTGAAGATAAAACAGCTTCAGGAAACAAAAAAGGACTAGCCTCTACCGACGCAGATGCATTTCTTCATCCATCGAAGAACGTAGCTGGTCCGAAAATTGATGTTACATTTCAATGCTCGAGTCTCGGTCAACCTTCTGAAAATGTTTCACATCAAAGTGCCTCTGCGAAGATCTTGTTGCTTGAGTGTGAAAAAGTGGCTGTTGATGAGCTTGTCTCCTCGTCTCCAGCTGTGGGATCTAATGACAGTACATCTCATGTACATGCTGTTGCAGATCAGAGTTATGAGGAGCCGATGACGGACAGTACTGAGGAAGGCAACCTATCCCCTGGCTTTGACGTCGTCGTCGGTGATGGGTCGGGGAATTTGGCTAGCCACGATGAGCCAGAGTACATCCTGTCAACGAATCTGGAACAAAGAGAACTGGATACTGGATTGTGCAGGGAAAATTTTGAAGACCATATTGCCTATGAGCCAATGCATTCTGATTTAGAACTTCTTTATGAACATGAGATGCACTCATACAACCACTTAGAGACCGAACCTGTTCTTTTCAATGACAGAAACATCATCAGCTGTCCGAGAGGGAAACTCATCAAGTCCATGTTTTCTCAAAAGAAAAGGCTCACGCTCGTGAATCTAGATTCGGAGGAATGGAACCATGCCGACCTTCGAAGCTATCTGCAGAGAGACAGCGTTTCTGGTAACCGTTCGATTGTTAGTTTATCAAGGAGAAGAAATCGATTGTCGTGTCGAATGAGTGGAAACTTTGTGAAACCTCGGAAGCCTGGTTTGTATCAACCACCCCTTGGAAGAAGACTAGCATTACAGGTCGGGAAGATTTCTAGAGGATCACCTCCAGAAAACATAACCTTTTCAAATGGTTTTAGTCAATATGGATCATTTAGACACTCAAGACAACACAGACCCTGCGGTCACTACGACGAATACGCTCCGACCAGACCACAACAAACATTGTTAAACATGTCAAGAAAATCCATCTCGAGGGAACCTGTCGTAAGGGATCATGGATTCAATCCGAAGTCAGTTCCATTCAAAGGACCGAAAACCCTTTCGCAGATCAAAGAAGAGAAGCGAAAAGTAGAAGAAAATGGAGGGTTCTCAATCGAAAAACGTCGTTCCATCGGAGCTGCATCATCTTCAACCAACTTTAGAGGACCAAAACCTTTGAGTGATATCCTGAAAGACAAAAGGAAGGTGGAGGAGGAGGAGGAGGAGGAGCTGGTGAAGGAAATGAATAGCAACCATATATTGCTTTAGTTAGCGTTAGCTGAAACAGAAGCTCAACTTGAGTGTCTATGGCGGCTTTGCCATTCTTTTAACGGTCTTCATTTAGTATTTGACTGTATGCATCTGATATTAGTGTTTTAGGTTGTAAATAGTCAAATAATATAATAATTATTTTTTTTAAA

Coding sequence (CDS)

ATGGGGGAAGATTTGCGTAAACGTAACACTGATTGCGTCTATTTCTTGGCTTCACCTCTTACCTGCAAGAAGGGTTTTGATTGCGAGTATCGGCACAGCGAGATTGCTAGGCTGAACCCTAGAGATTGTTACTACTGGCTGGCGGGAAACTGCTTGAATGCAGCCTGTGGTTTTCGGCATCCGCCAATGGATAGTCCTGCTGGAACAGTGTTAGAATCTTCTCAATGTTCTGTACCTGTGAACAAGACGATCATTCCCTGTTATTTTTATTTCAATGGCTGCTGCAGTAAAGGTGATACATGCTCATTTTTGCATGCCAATGATATTTCTCTTGCTACAAGATCTACAAAGACAGTATTTCCTAGTGGCAACGCGTCGTCCTCTGAAGATAAAACAGCTTCAGGAAACAAAAAAGGACTAGCCTCTACCGACGCAGATGCATTTCTTCATCCATCGAAGAACGTAGCTGGTCCGAAAATTGATGTTACATTTCAATGCTCGAGTCTCGGTCAACCTTCTGAAAATGTTTCACATCAAAGTGCCTCTGCGAAGATCTTGTTGCTTGAGTGTGAAAAAGTGGCTGTTGATGAGCTTGTCTCCTCGTCTCCAGCTGTGGGATCTAATGACAGTACATCTCATGTACATGCTGTTGCAGATCAGAGTTATGAGGAGCCGATGACGGACAGTACTGAGGAAGGCAACCTATCCCCTGGCTTTGACGTCGTCGTCGGTGATGGGTCGGGGAATTTGGCTAGCCACGATGAGCCAGAGTACATCCTGTCAACGAATCTGGAACAAAGAGAACTGGATACTGGATTGTGCAGGGAAAATTTTGAAGACCATATTGCCTATGAGCCAATGCATTCTGATTTAGAACTTCTTTATGAACATGAGATGCACTCATACAACCACTTAGAGACCGAACCTGTTCTTTTCAATGACAGAAACATCATCAGCTGTCCGAGAGGGAAACTCATCAAGTCCATGTTTTCTCAAAAGAAAAGGCTCACGCTCGTGAATCTAGATTCGGAGGAATGGAACCATGCCGACCTTCGAAGCTATCTGCAGAGAGACAGCGTTTCTGGTAACCGTTCGATTGTTAGTTTATCAAGGAGAAGAAATCGATTGTCGTGTCGAATGAGTGGAAACTTTGTGAAACCTCGGAAGCCTGGTTTGTATCAACCACCCCTTGGAAGAAGACTAGCATTACAGGTCGGGAAGATTTCTAGAGGATCACCTCCAGAAAACATAACCTTTTCAAATGGTTTTAGTCAATATGGATCATTTAGACACTCAAGACAACACAGACCCTGCGGTCACTACGACGAATACGCTCCGACCAGACCACAACAAACATTGTTAAACATGTCAAGAAAATCCATCTCGAGGGAACCTGTCGTAAGGGATCATGGATTCAATCCGAAGTCAGTTCCATTCAAAGGACCGAAAACCCTTTCGCAGATCAAAGAAGAGAAGCGAAAAGTAGAAGAAAATGGAGGGTTCTCAATCGAAAAACGTCGTTCCATCGGAGCTGCATCATCTTCAACCAACTTTAGAGGACCAAAACCTTTGAGTGATATCCTGAAAGACAAAAGGAAGGTGGAGGAGGAGGAGGAGGAGGAGCTGGTGAAGGAAATGAATAGCAACCATATATTGCTTTAG

Protein sequence

MGEDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRHPPMDSPAGTVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSFLHANDISLATRSTKTVFPSGNASSSEDKTASGNKKGLASTDADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQSASAKILLLECEKVAVDELVSSSPAVGSNDSTSHVHAVADQSYEEPMTDSTEEGNLSPGFDVVVGDGSGNLASHDEPEYILSTNLEQRELDTGLCRENFEDHIAYEPMHSDLELLYEHEMHSYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSVSGNRSIVSLSRRRNRLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRGSPPENITFSNGFSQYGSFRHSRQHRPCGHYDEYAPTRPQQTLLNMSRKSISREPVVRDHGFNPKSVPFKGPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTNFRGPKPLSDILKDKRKVEEEEEEELVKEMNSNHILL

Homology

[Close]

BLAST of Cp4.1LG18g04670 vs. ExPASy Swiss-Prot
Match: Q9ZUM0 (Zinc finger CCCH domain-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=At2g02160 PE=1 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 2.6e-34
Identity = 68/113 (60.18%), Postives = 77/113 (68.14%), Query Frame = 0


Query: 3   EDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRHPP 62
           ED  K NTDCVYFLASPLTCKKG +CEYRHSE AR+NPRDCYYWL GNCLN  CGFRHPP
Sbjct: 26  EDALKWNTDCVYFLASPLTCKKGPECEYRHSEYARMNPRDCYYWLNGNCLNPKCGFRHPP 85

Query: 63  MDSPAGTVLESSQCSV-PVNKTI---------IPCYFYFNGCCSKGDTCSFLH 106
           ++   G    +   SV P++ T          +PC F+  G C KGD CSFLH
Sbjct: 86  LEGLLGNQGGAPAVSVQPIHATAQHPSVAKQPVPCLFFQKGMCMKGDMCSFLH 138

[Close]

BLAST of Cp4.1LG18g04670 vs. ExPASy Swiss-Prot
Match: Q6AT25 (Zinc finger CCCH domain-containing protein 34 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0176400 PE=2 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 3.4e-34
Identity = 160/542 (29.52%), Postives = 230/542 (42.44%), Query Frame = 0


Query: 6   RKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRHPPMDS 65
           R+ NTDCVYFLASP TC KG  CEYRH++ AR N R+C+YW  GNC+N +C FRHPP+++
Sbjct: 14  RRCNTDCVYFLASPFTCTKGSKCEYRHADGARFNRRNCWYWFKGNCVNPSCTFRHPPLEN 73

Query: 66  PAGTVLES---SQCSVPVNKTIIPCYFYFNGCCSKGDTCSFLHANDISLATRSTKTVFPS 125
              T   +   S CS  V K   PCYFY+N  CSKGD C +LH                S
Sbjct: 74  LNKTKSLADPLSLCSTSV-KAANPCYFYYNSHCSKGDNCPYLH------------EPLTS 133

Query: 126 GNASSSEDKTASGNKKGLASTDADAFLHPSKN-VAGPKIDVTFQCSSLGQPSENVSHQSA 185
            +A  +  K  + N     S   D  +  SK+ +  P  D +     +   S N     A
Sbjct: 134 NDAVGTSCKATTSNPAVSKSYVGDEMVEESKDTITNPCQDTSCHIKEV-PVSINPEFGEA 193

Query: 186 SAKILLLECEKVAVDELVSSSPAVGSNDSTSHVHAVADQSYEEPMTDSTE--EGNLSPGF 245
            A    LE     +DE +  S             AV+D +  +   D TE  E + SPGF
Sbjct: 194 EAVSGALE-TSTDIDEYMKCS-------------AVSDLNSGDSTMDHTEQDERDSSPGF 253

Query: 246 DVVVGDGSGNLASHDEPEYILSTNLEQRELDTGLCRENFEDHIAYEPMHSDLELLYEHEM 305
           DV+V D    L++  + E+ L+T  + + L          D + Y+        +Y H+ 
Sbjct: 254 DVLVDD---CLSNKSDLEHQLTTESDNKVLH---AEYGIRDPVLYD--------MYYHDP 313

Query: 306 HSYNHLETEPVLFNDRN---IISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQ 365
             YN+ E E    +DR     +  P G         +  +TL +L  +   + ++ S   
Sbjct: 314 EYYNY-EPEFCGLDDRQGYLYLCQPNG-----AHEHESEITLGHLLPQ---NTEVTSDEY 373

Query: 366 RDSVSGNRSIVSLSRRRNRLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRGSPPEN 425
                  R+  S     N +        +  R+P   +   G++  +   K SR   P+N
Sbjct: 374 DRRFFNPRNFTSSVADTNFVHQHTQIRHISKRRPENRKGAKGKKDCI---KRSRCLEPKN 433

Query: 426 ITFSNGFSQYGSFRHSRQHRPCGHYDEYAPTRPQQTLLNMSRKSISREPVVRDHGFNPKS 485
            T      Q      +RQ +     D      PQ       R    +    + H  + KS
Sbjct: 434 ST------QQIESMPTRQRK-----DYLMGECPQPANHATFRGRRKKNRGKQQHVLSAKS 488

Query: 486 -----VPFKGPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTNFRGPKPLSDILKDK 534
                  F GPKTL+QIKEEK K   N  FS     +    S S +F GPK L+++L  K
Sbjct: 494 SEHPTADFTGPKTLAQIKEEKCK--SNSSFSHSTACTPNVRSFSDDFEGPKSLTELLMTK 488

[Close]

BLAST of Cp4.1LG18g04670 vs. ExPASy Swiss-Prot
Match: Q0J952 (Zinc finger CCCH domain-containing protein 32 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0671800 PE=2 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 8.3e-33
Identity = 166/590 (28.14%), Postives = 241/590 (40.85%), Query Frame = 0


Query: 3   EDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRHPP 62
           E+  +RNTDCVYFLASPLTCKKG +C++RHS+ AR+NPRDC+YWL  NCLN  C FRHPP
Sbjct: 28  EEALRRNTDCVYFLASPLTCKKGNECDFRHSDNARMNPRDCWYWLNSNCLNPKCPFRHPP 87

Query: 63  MDSPAGT------VLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSFLHANDISLATRST 122
           +D   G        + S        K ++PCY++  G C KGD C+F H    S+    +
Sbjct: 88  IDGMFGAPTTGMPAVSSHYAPFNSGKQLVPCYYFKKGNCLKGDRCAFYHGPQ-SVGNNPS 147

Query: 123 KTVFPSGNASSSEDKTAS----GNKKGLASTDADAFLHPSKNVAGPKIDVTFQCSSLGQP 182
           + V    +    + +T      G K  + ST++     P  N  G       + +     
Sbjct: 148 EQVVKVSSLPLEQLQTQKNDLLGIKDSVQSTNSIQHGAPITNERGK--TAVDRSTVNSAR 207

Query: 183 SENVSHQSASAKILLLECEKV------AVDELVSSS-----PAVGSNDSTSHVHAVAD-- 242
           +  V+   AS  +   + EKV      A+ E  ++S     P    N        V D  
Sbjct: 208 TATVAIPVASNAMSCPKSEKVKSSTPAALKESFTTSSGGDHPECYQNHFPMDSDPVRDWN 267

Query: 243 QSYEEPMTDSTEE---------GNLSPGFDVVV-GDGSGNLASHDEPEYILSTNLEQREL 302
           QSYE P  D   +         G  SPGFDV+V  D  G    HDE              
Sbjct: 268 QSYEMPPADDLPQNSREADELLGESSPGFDVLVDNDADGAAYLHDE-------------- 327

Query: 303 DTGLCRENFEDHIAYEPMHSDLELLYEHEMHSYNHLETEPVL------FNDRNIISCPRG 362
           D G      ED   YE   +D ++   HE   +N ++ +  +      +  +   S  R 
Sbjct: 328 DFGGDMYPVED---YEYAPADFDVRAHHERERFNGMDEQDQMGHMYDGYERKRRRSSERS 387

Query: 363 KLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSVSGNRSIVSLSRRRNRLSCRMSGN 422
             ++  F  ++R    + D  E + +DLR  L+R  +  N S +++S  RN    R    
Sbjct: 388 --MERPFHSERRFLQRDRDRVEMDGSDLRHRLRRRRI--NESSLAISPERNGEQRRRDER 447

Query: 423 FVKPRKPG------LYQPPLGRRLALQVG---KISRGSPPENITFSNGFSQYGSFR---- 482
           + + R  G       +Q   G  L+ ++    K+   SP    T S         R    
Sbjct: 448 Y-RERAHGHRSHRDHHQSSRGSTLSSRLQGRIKLPGRSPDRVDTRSEKERDRRRLRDRLS 507

Query: 483 -------HSRQHRPCGHYDEYAPTRPQQTLLNMSRKSISREPVVRDHGFNPKSVPFKGPK 534
                     +HR  G ++E    R  +  L  SR +        D     K VP     
Sbjct: 508 PVRRTEFQGTRHREAGQHEEQTQRRSSELALG-SRNA--------DGQHLTKDVP--DSH 567

[Close]

BLAST of Cp4.1LG18g04670 vs. ExPASy Swiss-Prot
Match: Q6K977 (Zinc finger CCCH domain-containing protein 19 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0831100 PE=2 SV=2)

HSP 1 Score: 128.6 bits (322), Expect = 2.1e-28
Identity = 146/552 (26.45%), Postives = 220/552 (39.86%), Query Frame = 0


Query: 3   EDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRHPP 62
           E  R+R+TDC+YFLASPLTCKKG +CEYRHS+ AR+NPRDC+YW  GNC N  C FRHPP
Sbjct: 13  EARRRRSTDCIYFLASPLTCKKGSECEYRHSDAARMNPRDCWYWFNGNCANPKCSFRHPP 72

Query: 63  MD-------SPAGTVLESSQCSVPVNKTI-----------IPCYFYFNGCCSKGDTCSFL 122
           +D       +P  +   + Q SVP    +           +PCY++  G C KGD C+FL
Sbjct: 73  LDGLVGAPTTPRTSQQSAPQVSVPAQAPVPNPASGTAKQGVPCYYFQKGMCVKGDRCAFL 132

Query: 123 HANDI--SLATRSTKTVFPSGNASSSEDKTASGNKKGLASTDAD--AFLHPSKNVAGPKI 182
           H      S A + T  VF   +    + K +       A  +A    F  P  +    K 
Sbjct: 133 HLPQATGSPAPQHTTKVFAPASVPHPQLKNSWTKPNSSAQQNAPPAIFDKPKDSAHNGKT 192

Query: 183 DVTFQCSSLGQPSENVSHQSASAKILLLECEKVAVDELVSSSPAVGSNDSTSHVHAVADQ 242
                 ++    S  + H    + +         V +     P+ G + + + V     +
Sbjct: 193 AQKQNLTNRAGHSSGIIHDKKGSYM------PSGVTKNYRPPPSTGDDLAENGVE--MGE 252

Query: 243 SYEEPMTDSTEEGNLSPGFDVVVGDGSGNL--ASHDEPEYILSTNLEQRELDTGLCRENF 302
              EP          SPG DV+ G    N   +  ++      TN EQ     G+ R+  
Sbjct: 253 FVREP----------SPGSDVLTGGADDNTEQSLREDRGAYRRTNGEQH---IGMLRQT- 312

Query: 303 EDHIAYEPMH--SDLELLYEHEMHSYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRL 362
            D   +E  H  S  +LL E     ++  E  P+  +  ++    R +L+K       R 
Sbjct: 313 HDSYGFERSHRGSAEKLLSESR---FSQREPMPLTADSSDL----RQRLLKQRRLNNPRS 372

Query: 363 TLV----NLDSEEWNHADLRSYLQRDSVSGNRSIVSLSRRRNRLSCRMSGNF----VKPR 422
             V    N+  E+  H   R   QR     +   VS SR R R+       F    ++P 
Sbjct: 373 GQVSDRHNVYPEDERHDRHR---QRGEEQASNDGVSSSRLRGRIRLPAETTFDRLGLQPE 432

Query: 423 KP------GLYQPPLGRRLALQVGKISRGSPPENIT--FSNGFSQYGSFRHSRQHRPCGH 482
           K           PP    L  ++    +  P E+++    +  S+      S        
Sbjct: 433 KERDRGPRARLSPPSQTDLRGKLHDRLKAKPNEDVSGNVQSSLSKANEDAESLNFAGPKS 492

Query: 483 YDEYAPTRPQQTLLNMSRK-----SISREPVVRDHGFNPKSVPFKGPKTLSQIKEEKRKV 508
             E    +   +L+  SR       ++ E V      +P  V F GPK L+ I + KR+ 
Sbjct: 493 LAELKAKKVAGSLMKSSRSLTGPVRMTSEIVTIKDSSDP--VLFDGPKPLNAILKRKREA 530

[Close]

BLAST of Cp4.1LG18g04670 vs. ExPASy Swiss-Prot
Match: Q5ZJJ1 (Zinc finger CCCH domain-containing protein 11A OS=Gallus gallus OX=9031 GN=ZC3H11A PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 2.7e-07
Identity = 40/134 (29.85%), Postives = 57/134 (42.54%), Query Frame = 0


Query: 5   LRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRHPPMD 64
           + K+  DC ++  S  TC KG +C +RH E A  N   C  W  G C    C FRH  +D
Sbjct: 1   MSKQGDDCYFYFYS--TCNKGDNCPFRHCEAALGNETICTLWKEGRCFRNVCRFRHMEID 60

Query: 65  SPAGTVLESSQCSVPVNKTIIPCYFYFN-GCCSKGDTCSFLHAND---ISLATRSTKTVF 124
                            ++ IPC++    G C K + C+F H        L    +KT  
Sbjct: 61  K---------------KRSEIPCFWENQPGGCQKSN-CAFHHTKGRYVDGLFLPPSKTTL 116

Query: 125 PSGNASSSEDKTAS 135
           PS   S+ +D  A+
Sbjct: 121 PSPPESADDDLKAA 116

[Close]

BLAST of Cp4.1LG18g04670 vs. NCBI nr
Match: XP_023516193.1 (zinc finger CCCH domain-containing protein 34-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1117 bits (2890), Expect = 0.0
Identity = 553/553 (100.00%), Postives = 553/553 (100.00%), Query Frame = 0


Query: 1   MGEDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRH 60
           MGEDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRH
Sbjct: 1   MGEDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRH 60

Query: 61  PPMDSPAGTVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSFLHANDISLATRSTKTVF 120
           PPMDSPAGTVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSFLHANDISLATRSTKTVF
Sbjct: 61  PPMDSPAGTVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSFLHANDISLATRSTKTVF 120

Query: 121 PSGNASSSEDKTASGNKKGLASTDADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQS 180
           PSGNASSSEDKTASGNKKGLASTDADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQS
Sbjct: 121 PSGNASSSEDKTASGNKKGLASTDADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQS 180

Query: 181 ASAKILLLECEKVAVDELVSSSPAVGSNDSTSHVHAVADQSYEEPMTDSTEEGNLSPGFD 240
           ASAKILLLECEKVAVDELVSSSPAVGSNDSTSHVHAVADQSYEEPMTDSTEEGNLSPGFD
Sbjct: 181 ASAKILLLECEKVAVDELVSSSPAVGSNDSTSHVHAVADQSYEEPMTDSTEEGNLSPGFD 240

Query: 241 VVVGDGSGNLASHDEPEYILSTNLEQRELDTGLCRENFEDHIAYEPMHSDLELLYEHEMH 300
           VVVGDGSGNLASHDEPEYILSTNLEQRELDTGLCRENFEDHIAYEPMHSDLELLYEHEMH
Sbjct: 241 VVVGDGSGNLASHDEPEYILSTNLEQRELDTGLCRENFEDHIAYEPMHSDLELLYEHEMH 300

Query: 301 SYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV 360
           SYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV
Sbjct: 301 SYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV 360

Query: 361 SGNRSIVSLSRRRNRLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRGSPPENITFS 420
           SGNRSIVSLSRRRNRLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRGSPPENITFS
Sbjct: 361 SGNRSIVSLSRRRNRLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRGSPPENITFS 420

Query: 421 NGFSQYGSFRHSRQHRPCGHYDEYAPTRPQQTLLNMSRKSISREPVVRDHGFNPKSVPFK 480
           NGFSQYGSFRHSRQHRPCGHYDEYAPTRPQQTLLNMSRKSISREPVVRDHGFNPKSVPFK
Sbjct: 421 NGFSQYGSFRHSRQHRPCGHYDEYAPTRPQQTLLNMSRKSISREPVVRDHGFNPKSVPFK 480

Query: 481 GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTNFRGPKPLSDILKDKRKVEEEEEE 540
           GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTNFRGPKPLSDILKDKRKVEEEEEE
Sbjct: 481 GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTNFRGPKPLSDILKDKRKVEEEEEE 540

Query: 541 ELVKEMNSNHILL 553
           ELVKEMNSNHILL
Sbjct: 541 ELVKEMNSNHILL 553

[Close]

BLAST of Cp4.1LG18g04670 vs. NCBI nr
Match: KAG7023534.1 (Zinc finger CCCH domain-containing protein 34, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1091 bits (2821), Expect = 0.0
Identity = 541/553 (97.83%), Postives = 545/553 (98.55%), Query Frame = 0


Query: 1   MGEDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRH 60
           MGE LRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRH
Sbjct: 1   MGEGLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRH 60

Query: 61  PPMDSPAGTVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSFLHANDISLATRSTKTVF 120
           PPMDSPAG VLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCS+LHANDISLATRSTKTVF
Sbjct: 61  PPMDSPAGAVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVF 120

Query: 121 PSGNASSSEDKTASGNKKGLASTDADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQS 180
           PSGNASSSEDKTASGNKKGLAST+ADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQS
Sbjct: 121 PSGNASSSEDKTASGNKKGLASTNADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQS 180

Query: 181 ASAKILLLECEKVAVDELVSSSPAVGSNDSTSHVHAVADQSYEEPMTDSTEEGNLSPGFD 240
           ASAKILLLECEKVAVDELVSSSPAVGSNDSTSHVHAVADQSYEEPMTDSTEEGNLSPGFD
Sbjct: 181 ASAKILLLECEKVAVDELVSSSPAVGSNDSTSHVHAVADQSYEEPMTDSTEEGNLSPGFD 240

Query: 241 VVVGDGSGNLASHDEPEYILSTNLEQRELDTGLCRENFEDHIAYEPMHSDLELLYEHEMH 300
           VVVGDGSGNLASHD+PEYILSTNLEQRELDTGLCRENFEDHIAYEPMHSDLELLYEHEMH
Sbjct: 241 VVVGDGSGNLASHDDPEYILSTNLEQRELDTGLCRENFEDHIAYEPMHSDLELLYEHEMH 300

Query: 301 SYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV 360
           SYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV
Sbjct: 301 SYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV 360

Query: 361 SGNRSIVSLSRRRNRLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRGSPPENITFS 420
           SGNRSIVSLSRRRNRLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISR SPPENITFS
Sbjct: 361 SGNRSIVSLSRRRNRLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRVSPPENITFS 420

Query: 421 NGFSQYGSFRHSRQHRPCGHYDEYAPTRPQQTLLNMSRKSISREPVVRDHGFNPKSVPFK 480
           NGFSQYGSFRHSRQHRPCGHYDEYAPTRPQQTL NMSRKSISREPVVRDH  NPKSVPFK
Sbjct: 421 NGFSQYGSFRHSRQHRPCGHYDEYAPTRPQQTLSNMSRKSISREPVVRDHWLNPKSVPFK 480

Query: 481 GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTNFRGPKPLSDILKDKRKVEEEEEE 540
           GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSST+FRGPKPLSDILKDKRKVEEEEEE
Sbjct: 481 GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTDFRGPKPLSDILKDKRKVEEEEEE 540

Query: 541 ELVKEMNSNHILL 553
            LVKEMN NHILL
Sbjct: 541 GLVKEMNRNHILL 553

[Close]

BLAST of Cp4.1LG18g04670 vs. NCBI nr
Match: KAG6589862.1 (Zinc finger CCCH domain-containing protein 34, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1089 bits (2817), Expect = 0.0
Identity = 542/553 (98.01%), Postives = 545/553 (98.55%), Query Frame = 0


Query: 1   MGEDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRH 60
           MGE LRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRH
Sbjct: 1   MGEGLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRH 60

Query: 61  PPMDSPAGTVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSFLHANDISLATRSTKTVF 120
           PPMDSPAG VLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCS+LHANDISLATRSTKTVF
Sbjct: 61  PPMDSPAGAVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVF 120

Query: 121 PSGNASSSEDKTASGNKKGLASTDADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQS 180
           PSGNASSSEDKTASGNKKGLAST+ADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQS
Sbjct: 121 PSGNASSSEDKTASGNKKGLASTNADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQS 180

Query: 181 ASAKILLLECEKVAVDELVSSSPAVGSNDSTSHVHAVADQSYEEPMTDSTEEGNLSPGFD 240
           ASAKILLLECEKVAVDELVSSSPAVGSNDSTSHVHAVADQSYEEPMTDSTEEGNLSPGFD
Sbjct: 181 ASAKILLLECEKVAVDELVSSSPAVGSNDSTSHVHAVADQSYEEPMTDSTEEGNLSPGFD 240

Query: 241 VVVGDGSGNLASHDEPEYILSTNLEQRELDTGLCRENFEDHIAYEPMHSDLELLYEHEMH 300
           VVVGDGSGNLASHD+PEYILSTNLEQRELDTGLCRENFEDHIAYEPMHSDLELLYEHEMH
Sbjct: 241 VVVGDGSGNLASHDDPEYILSTNLEQRELDTGLCRENFEDHIAYEPMHSDLELLYEHEMH 300

Query: 301 SYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV 360
           SYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV
Sbjct: 301 SYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV 360

Query: 361 SGNRSIVSLSRRRNRLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRGSPPENITFS 420
           SGNRSIVSLSRRRNRLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISR SPPENITFS
Sbjct: 361 SGNRSIVSLSRRRNRLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRVSPPENITFS 420

Query: 421 NGFSQYGSFRHSRQHRPCGHYDEYAPTRPQQTLLNMSRKSISREPVVRDHGFNPKSVPFK 480
           NGFSQYGSFRHSRQHRPCGHYDEYAPTRPQQTL NMSRKSISREPVVRDH  NPKSVPFK
Sbjct: 421 NGFSQYGSFRHSRQHRPCGHYDEYAPTRPQQTLSNMSRKSISREPVVRDHWLNPKSVPFK 480

Query: 481 GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTNFRGPKPLSDILKDKRKVEEEEEE 540
           GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTNFRGPKPLSDILKDKRKVEEEEEE
Sbjct: 481 GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTNFRGPKPLSDILKDKRKVEEEEEE 540

Query: 541 ELVKEMNSNHILL 553
            LVKEMN NHILL
Sbjct: 541 -LVKEMNRNHILL 552

[Close]

BLAST of Cp4.1LG18g04670 vs. NCBI nr
Match: XP_022961048.1 (zinc finger CCCH domain-containing protein 34-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 1081 bits (2796), Expect = 0.0
Identity = 537/553 (97.11%), Postives = 542/553 (98.01%), Query Frame = 0


Query: 1   MGEDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRH 60
           MGEDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRH
Sbjct: 1   MGEDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRH 60

Query: 61  PPMDSPAGTVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSFLHANDISLATRSTKTVF 120
           PPMDSPAG VLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCS+LHANDISLATRSTKTVF
Sbjct: 61  PPMDSPAGAVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVF 120

Query: 121 PSGNASSSEDKTASGNKKGLASTDADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQS 180
           PSGNASSSEDKTASGNKKGLASTDADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQS
Sbjct: 121 PSGNASSSEDKTASGNKKGLASTDADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQS 180

Query: 181 ASAKILLLECEKVAVDELVSSSPAVGSNDSTSHVHAVADQSYEEPMTDSTEEGNLSPGFD 240
           ASAKILLLECEKVAVDELVSSSPAVGSNDSTSH+HAVADQSYEEPMTDSTEEGNLSPGFD
Sbjct: 181 ASAKILLLECEKVAVDELVSSSPAVGSNDSTSHIHAVADQSYEEPMTDSTEEGNLSPGFD 240

Query: 241 VVVGDGSGNLASHDEPEYILSTNLEQRELDTGLCRENFEDHIAYEPMHSDLELLYEHEMH 300
           VVVGDGSGNLASHD+PEYILSTNLEQRE D GLCRENFEDHIAYEPMHSDLELLYEHEMH
Sbjct: 241 VVVGDGSGNLASHDDPEYILSTNLEQREQDPGLCRENFEDHIAYEPMHSDLELLYEHEMH 300

Query: 301 SYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV 360
           SYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV
Sbjct: 301 SYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV 360

Query: 361 SGNRSIVSLSRRRNRLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRGSPPENITFS 420
           SGNRSIVSLSRRRN+LSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISR SPPENITFS
Sbjct: 361 SGNRSIVSLSRRRNQLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRVSPPENITFS 420

Query: 421 NGFSQYGSFRHSRQHRPCGHYDEYAPTRPQQTLLNMSRKSISREPVVRDHGFNPKSVPFK 480
           NGFSQYGSFRHSRQHRPCGHYDEYAPT PQQTL NMSRKSISREPVVRD G NPKSVPFK
Sbjct: 421 NGFSQYGSFRHSRQHRPCGHYDEYAPTTPQQTLSNMSRKSISREPVVRDRGLNPKSVPFK 480

Query: 481 GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTNFRGPKPLSDILKDKRKVEEEEEE 540
           GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSST+FRGPKPLSDILKDKRKVEEEEE 
Sbjct: 481 GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTDFRGPKPLSDILKDKRKVEEEEE- 540

Query: 541 ELVKEMNSNHILL 553
            LVKEMN NHILL
Sbjct: 541 -LVKEMNRNHILL 551

[Close]

BLAST of Cp4.1LG18g04670 vs. NCBI nr
Match: XP_022987654.1 (zinc finger CCCH domain-containing protein 34-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 1060 bits (2741), Expect = 0.0
Identity = 529/553 (95.66%), Postives = 536/553 (96.93%), Query Frame = 0


Query: 1   MGEDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRH 60
           MGEDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIAR+NPRDCYYWLAGNCLNAACGFRH
Sbjct: 1   MGEDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARVNPRDCYYWLAGNCLNAACGFRH 60

Query: 61  PPMDSPAGTVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSFLHANDISLATRSTKTVF 120
           PPMDSPAGTVLESS CSVPVNKTIIPCYFYFNGCCSKGDTCSFLHANDISLATRSTKTVF
Sbjct: 61  PPMDSPAGTVLESSLCSVPVNKTIIPCYFYFNGCCSKGDTCSFLHANDISLATRSTKTVF 120

Query: 121 PSGNASSSEDKTASGNKKGLASTDADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQS 180
           PSGNASSSEDKTASGNKKGL STDADAFLHPSK VA PKIDVTFQCSSLGQPSENVSHQS
Sbjct: 121 PSGNASSSEDKTASGNKKGLDSTDADAFLHPSKKVACPKIDVTFQCSSLGQPSENVSHQS 180

Query: 181 ASAKILLLECEKVAVDELVSSSPAVGSNDSTSHVHAVADQSYEEPMTDSTEEGNLSPGFD 240
           ASAKILLLECEKVAVDEL+SSSPAVGSNDSTSHVHAVADQ YEEPMTDSTEEGNLSPGFD
Sbjct: 181 ASAKILLLECEKVAVDELLSSSPAVGSNDSTSHVHAVADQRYEEPMTDSTEEGNLSPGFD 240

Query: 241 VVVGDGSGNLASHDEPEYILSTNLEQRELDTGLCRENFEDHIAYEPMHSDLELLYEHEMH 300
           VVVGDGSGNLASHD+PEY+LSTNLEQRELDTGLCRENFEDHIAYE MHSDLELLYEHEMH
Sbjct: 241 VVVGDGSGNLASHDDPEYVLSTNLEQRELDTGLCRENFEDHIAYESMHSDLELLYEHEMH 300

Query: 301 SYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV 360
           SYNHLETEPVLFNDRNIISCPR KLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV
Sbjct: 301 SYNHLETEPVLFNDRNIISCPRRKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV 360

Query: 361 SGNRSIVSLSRRRNRLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRGSPPENITFS 420
           SGNRSIVSLSRRRN LSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRGSPPENITFS
Sbjct: 361 SGNRSIVSLSRRRNGLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRGSPPENITFS 420

Query: 421 NGFSQYGSFRHSRQHRPCGHYDEYAPTRPQQTLLNMSRKSISREPVVRDHGFNPKSVPFK 480
           NGFSQYGSFRHSRQHRPCGHYDEYAPTRPQQTLL+MSRKSI REPVVRD GFN KSVPFK
Sbjct: 421 NGFSQYGSFRHSRQHRPCGHYDEYAPTRPQQTLLDMSRKSILREPVVRDRGFNLKSVPFK 480

Query: 481 GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTNFRGPKPLSDILKDKRKVEEEEEE 540
           GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSS +FRGPK LSDILKDKRKVEEEE  
Sbjct: 481 GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSADFRGPKALSDILKDKRKVEEEE-- 540

Query: 541 ELVKEMNSNHILL 553
            LVKEMN +HILL
Sbjct: 541 -LVKEMNRHHILL 550

[Close]

BLAST of Cp4.1LG18g04670 vs. ExPASy TrEMBL
Match: A0A6J1HAR9 (zinc finger CCCH domain-containing protein 34-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461673 PE=4 SV=1)

HSP 1 Score: 1081 bits (2796), Expect = 0.0
Identity = 537/553 (97.11%), Postives = 542/553 (98.01%), Query Frame = 0


Query: 1   MGEDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRH 60
           MGEDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRH
Sbjct: 1   MGEDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRH 60

Query: 61  PPMDSPAGTVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSFLHANDISLATRSTKTVF 120
           PPMDSPAG VLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCS+LHANDISLATRSTKTVF
Sbjct: 61  PPMDSPAGAVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVF 120

Query: 121 PSGNASSSEDKTASGNKKGLASTDADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQS 180
           PSGNASSSEDKTASGNKKGLASTDADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQS
Sbjct: 121 PSGNASSSEDKTASGNKKGLASTDADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQS 180

Query: 181 ASAKILLLECEKVAVDELVSSSPAVGSNDSTSHVHAVADQSYEEPMTDSTEEGNLSPGFD 240
           ASAKILLLECEKVAVDELVSSSPAVGSNDSTSH+HAVADQSYEEPMTDSTEEGNLSPGFD
Sbjct: 181 ASAKILLLECEKVAVDELVSSSPAVGSNDSTSHIHAVADQSYEEPMTDSTEEGNLSPGFD 240

Query: 241 VVVGDGSGNLASHDEPEYILSTNLEQRELDTGLCRENFEDHIAYEPMHSDLELLYEHEMH 300
           VVVGDGSGNLASHD+PEYILSTNLEQRE D GLCRENFEDHIAYEPMHSDLELLYEHEMH
Sbjct: 241 VVVGDGSGNLASHDDPEYILSTNLEQREQDPGLCRENFEDHIAYEPMHSDLELLYEHEMH 300

Query: 301 SYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV 360
           SYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV
Sbjct: 301 SYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV 360

Query: 361 SGNRSIVSLSRRRNRLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRGSPPENITFS 420
           SGNRSIVSLSRRRN+LSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISR SPPENITFS
Sbjct: 361 SGNRSIVSLSRRRNQLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRVSPPENITFS 420

Query: 421 NGFSQYGSFRHSRQHRPCGHYDEYAPTRPQQTLLNMSRKSISREPVVRDHGFNPKSVPFK 480
           NGFSQYGSFRHSRQHRPCGHYDEYAPT PQQTL NMSRKSISREPVVRD G NPKSVPFK
Sbjct: 421 NGFSQYGSFRHSRQHRPCGHYDEYAPTTPQQTLSNMSRKSISREPVVRDRGLNPKSVPFK 480

Query: 481 GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTNFRGPKPLSDILKDKRKVEEEEEE 540
           GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSST+FRGPKPLSDILKDKRKVEEEEE 
Sbjct: 481 GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTDFRGPKPLSDILKDKRKVEEEEE- 540

Query: 541 ELVKEMNSNHILL 553
            LVKEMN NHILL
Sbjct: 541 -LVKEMNRNHILL 551

[Close]

BLAST of Cp4.1LG18g04670 vs. ExPASy TrEMBL
Match: A0A6J1JJH0 (zinc finger CCCH domain-containing protein 34-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485142 PE=4 SV=1)

HSP 1 Score: 1060 bits (2741), Expect = 0.0
Identity = 529/553 (95.66%), Postives = 536/553 (96.93%), Query Frame = 0


Query: 1   MGEDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRH 60
           MGEDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIAR+NPRDCYYWLAGNCLNAACGFRH
Sbjct: 1   MGEDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARVNPRDCYYWLAGNCLNAACGFRH 60

Query: 61  PPMDSPAGTVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSFLHANDISLATRSTKTVF 120
           PPMDSPAGTVLESS CSVPVNKTIIPCYFYFNGCCSKGDTCSFLHANDISLATRSTKTVF
Sbjct: 61  PPMDSPAGTVLESSLCSVPVNKTIIPCYFYFNGCCSKGDTCSFLHANDISLATRSTKTVF 120

Query: 121 PSGNASSSEDKTASGNKKGLASTDADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQS 180
           PSGNASSSEDKTASGNKKGL STDADAFLHPSK VA PKIDVTFQCSSLGQPSENVSHQS
Sbjct: 121 PSGNASSSEDKTASGNKKGLDSTDADAFLHPSKKVACPKIDVTFQCSSLGQPSENVSHQS 180

Query: 181 ASAKILLLECEKVAVDELVSSSPAVGSNDSTSHVHAVADQSYEEPMTDSTEEGNLSPGFD 240
           ASAKILLLECEKVAVDEL+SSSPAVGSNDSTSHVHAVADQ YEEPMTDSTEEGNLSPGFD
Sbjct: 181 ASAKILLLECEKVAVDELLSSSPAVGSNDSTSHVHAVADQRYEEPMTDSTEEGNLSPGFD 240

Query: 241 VVVGDGSGNLASHDEPEYILSTNLEQRELDTGLCRENFEDHIAYEPMHSDLELLYEHEMH 300
           VVVGDGSGNLASHD+PEY+LSTNLEQRELDTGLCRENFEDHIAYE MHSDLELLYEHEMH
Sbjct: 241 VVVGDGSGNLASHDDPEYVLSTNLEQRELDTGLCRENFEDHIAYESMHSDLELLYEHEMH 300

Query: 301 SYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV 360
           SYNHLETEPVLFNDRNIISCPR KLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV
Sbjct: 301 SYNHLETEPVLFNDRNIISCPRRKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSV 360

Query: 361 SGNRSIVSLSRRRNRLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRGSPPENITFS 420
           SGNRSIVSLSRRRN LSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRGSPPENITFS
Sbjct: 361 SGNRSIVSLSRRRNGLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRGSPPENITFS 420

Query: 421 NGFSQYGSFRHSRQHRPCGHYDEYAPTRPQQTLLNMSRKSISREPVVRDHGFNPKSVPFK 480
           NGFSQYGSFRHSRQHRPCGHYDEYAPTRPQQTLL+MSRKSI REPVVRD GFN KSVPFK
Sbjct: 421 NGFSQYGSFRHSRQHRPCGHYDEYAPTRPQQTLLDMSRKSILREPVVRDRGFNLKSVPFK 480

Query: 481 GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTNFRGPKPLSDILKDKRKVEEEEEE 540
           GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSS +FRGPK LSDILKDKRKVEEEE  
Sbjct: 481 GPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSADFRGPKALSDILKDKRKVEEEE-- 540

Query: 541 ELVKEMNSNHILL 553
            LVKEMN +HILL
Sbjct: 541 -LVKEMNRHHILL 550

[Close]

BLAST of Cp4.1LG18g04670 vs. ExPASy TrEMBL
Match: A0A6J1JK29 (zinc finger CCCH domain-containing protein 34-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485142 PE=4 SV=1)

HSP 1 Score: 1019 bits (2635), Expect = 0.0
Identity = 529/648 (81.64%), Postives = 536/648 (82.72%), Query Frame = 0


Query: 1   MGEDLRKRNTDCVYFLASPLTCKK------------------------------------ 60
           MGEDLRKRNTDCVYFLASPLTCKK                                    
Sbjct: 1   MGEDLRKRNTDCVYFLASPLTCKKVSFSCLINNNRTSFHVTIPSRCEHRGIWLMLPLSYH 60

Query: 61  -----------------------------------------------------------G 120
                                                                      G
Sbjct: 61  YCEDLALHLKDFLLHSLEMHRRDYVFEFTLSIIRFLGFNVESAFRVYVYVMNMATIFFQG 120

Query: 121 FDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRHPPMDSPAGTVLESSQCSVPVNKTII 180
           FDCEYRHSEIAR+NPRDCYYWLAGNCLNAACGFRHPPMDSPAGTVLESS CSVPVNKTII
Sbjct: 121 FDCEYRHSEIARVNPRDCYYWLAGNCLNAACGFRHPPMDSPAGTVLESSLCSVPVNKTII 180

Query: 181 PCYFYFNGCCSKGDTCSFLHANDISLATRSTKTVFPSGNASSSEDKTASGNKKGLASTDA 240
           PCYFYFNGCCSKGDTCSFLHANDISLATRSTKTVFPSGNASSSEDKTASGNKKGL STDA
Sbjct: 181 PCYFYFNGCCSKGDTCSFLHANDISLATRSTKTVFPSGNASSSEDKTASGNKKGLDSTDA 240

Query: 241 DAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQSASAKILLLECEKVAVDELVSSSPAV 300
           DAFLHPSK VA PKIDVTFQCSSLGQPSENVSHQSASAKILLLECEKVAVDEL+SSSPAV
Sbjct: 241 DAFLHPSKKVACPKIDVTFQCSSLGQPSENVSHQSASAKILLLECEKVAVDELLSSSPAV 300

Query: 301 GSNDSTSHVHAVADQSYEEPMTDSTEEGNLSPGFDVVVGDGSGNLASHDEPEYILSTNLE 360
           GSNDSTSHVHAVADQ YEEPMTDSTEEGNLSPGFDVVVGDGSGNLASHD+PEY+LSTNLE
Sbjct: 301 GSNDSTSHVHAVADQRYEEPMTDSTEEGNLSPGFDVVVGDGSGNLASHDDPEYVLSTNLE 360

Query: 361 QRELDTGLCRENFEDHIAYEPMHSDLELLYEHEMHSYNHLETEPVLFNDRNIISCPRGKL 420
           QRELDTGLCRENFEDHIAYE MHSDLELLYEHEMHSYNHLETEPVLFNDRNIISCPR KL
Sbjct: 361 QRELDTGLCRENFEDHIAYESMHSDLELLYEHEMHSYNHLETEPVLFNDRNIISCPRRKL 420

Query: 421 IKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSVSGNRSIVSLSRRRNRLSCRMSGNFV 480
           IKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSVSGNRSIVSLSRRRN LSCRMSGNFV
Sbjct: 421 IKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSVSGNRSIVSLSRRRNGLSCRMSGNFV 480

Query: 481 KPRKPGLYQPPLGRRLALQVGKISRGSPPENITFSNGFSQYGSFRHSRQHRPCGHYDEYA 540
           KPRKPGLYQPPLGRRLALQVGKISRGSPPENITFSNGFSQYGSFRHSRQHRPCGHYDEYA
Sbjct: 481 KPRKPGLYQPPLGRRLALQVGKISRGSPPENITFSNGFSQYGSFRHSRQHRPCGHYDEYA 540

Query: 541 PTRPQQTLLNMSRKSISREPVVRDHGFNPKSVPFKGPKTLSQIKEEKRKVEENGGFSIEK 553
           PTRPQQTLL+MSRKSI REPVVRD GFN KSVPFKGPKTLSQIKEEKRKVEENGGFSIEK
Sbjct: 541 PTRPQQTLLDMSRKSILREPVVRDRGFNLKSVPFKGPKTLSQIKEEKRKVEENGGFSIEK 600

[Close]

BLAST of Cp4.1LG18g04670 vs. ExPASy TrEMBL
Match: A0A6J1HCV5 (zinc finger CCCH domain-containing protein 34-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111461673 PE=4 SV=1)

HSP 1 Score: 939 bits (2427), Expect = 0.0
Identity = 475/491 (96.74%), Postives = 480/491 (97.76%), Query Frame = 0


Query: 63  MDSPAGTVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSFLHANDISLATRSTKTVFPS 122
           MDSPAG VLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCS+LHANDISLATRSTKTVFPS
Sbjct: 1   MDSPAGAVLESSQCSVPVNKTIIPCYFYFNGCCSKGDTCSYLHANDISLATRSTKTVFPS 60

Query: 123 GNASSSEDKTASGNKKGLASTDADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQSAS 182
           GNASSSEDKTASGNKKGLASTDADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQSAS
Sbjct: 61  GNASSSEDKTASGNKKGLASTDADAFLHPSKNVAGPKIDVTFQCSSLGQPSENVSHQSAS 120

Query: 183 AKILLLECEKVAVDELVSSSPAVGSNDSTSHVHAVADQSYEEPMTDSTEEGNLSPGFDVV 242
           AKILLLECEKVAVDELVSSSPAVGSNDSTSH+HAVADQSYEEPMTDSTEEGNLSPGFDVV
Sbjct: 121 AKILLLECEKVAVDELVSSSPAVGSNDSTSHIHAVADQSYEEPMTDSTEEGNLSPGFDVV 180

Query: 243 VGDGSGNLASHDEPEYILSTNLEQRELDTGLCRENFEDHIAYEPMHSDLELLYEHEMHSY 302
           VGDGSGNLASHD+PEYILSTNLEQRE D GLCRENFEDHIAYEPMHSDLELLYEHEMHSY
Sbjct: 181 VGDGSGNLASHDDPEYILSTNLEQREQDPGLCRENFEDHIAYEPMHSDLELLYEHEMHSY 240

Query: 303 NHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSVSG 362
           NHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSVSG
Sbjct: 241 NHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRLTLVNLDSEEWNHADLRSYLQRDSVSG 300

Query: 363 NRSIVSLSRRRNRLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRGSPPENITFSNG 422
           NRSIVSLSRRRN+LSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISR SPPENITFSNG
Sbjct: 301 NRSIVSLSRRRNQLSCRMSGNFVKPRKPGLYQPPLGRRLALQVGKISRVSPPENITFSNG 360

Query: 423 FSQYGSFRHSRQHRPCGHYDEYAPTRPQQTLLNMSRKSISREPVVRDHGFNPKSVPFKGP 482
           FSQYGSFRHSRQHRPCGHYDEYAPT PQQTL NMSRKSISREPVVRD G NPKSVPFKGP
Sbjct: 361 FSQYGSFRHSRQHRPCGHYDEYAPTTPQQTLSNMSRKSISREPVVRDRGLNPKSVPFKGP 420

Query: 483 KTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTNFRGPKPLSDILKDKRKVEEEEEEEL 542
           KTLSQIKEEKRKVEENGGFSIEKRRSIGAASSST+FRGPKPLSDILKDKRKVEEEEE  L
Sbjct: 421 KTLSQIKEEKRKVEENGGFSIEKRRSIGAASSSTDFRGPKPLSDILKDKRKVEEEEE--L 480

Query: 543 VKEMNSNHILL 553
           VKEMN NHILL
Sbjct: 481 VKEMNRNHILL 489

[Close]

BLAST of Cp4.1LG18g04670 vs. ExPASy TrEMBL
Match: A0A6J1HAV5 (uncharacterized protein LOC111461673 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111461673 PE=4 SV=1)

HSP 1 Score: 868 bits (2242), Expect = 1.60e-315
Identity = 442/457 (96.72%), Postives = 447/457 (97.81%), Query Frame = 0


Query: 97  KGDTCSFLHANDISLATRSTKTVFPSGNASSSEDKTASGNKKGLASTDADAFLHPSKNVA 156
           KGDTCS+LHANDISLATRSTKTVFPSGNASSSEDKTASGNKKGLASTDADAFLHPSKNVA
Sbjct: 10  KGDTCSYLHANDISLATRSTKTVFPSGNASSSEDKTASGNKKGLASTDADAFLHPSKNVA 69

Query: 157 GPKIDVTFQCSSLGQPSENVSHQSASAKILLLECEKVAVDELVSSSPAVGSNDSTSHVHA 216
           GPKIDVTFQCSSLGQPSENVSHQSASAKILLLECEKVAVDELVSSSPAVGSNDSTSH+HA
Sbjct: 70  GPKIDVTFQCSSLGQPSENVSHQSASAKILLLECEKVAVDELVSSSPAVGSNDSTSHIHA 129

Query: 217 VADQSYEEPMTDSTEEGNLSPGFDVVVGDGSGNLASHDEPEYILSTNLEQRELDTGLCRE 276
           VADQSYEEPMTDSTEEGNLSPGFDVVVGDGSGNLASHD+PEYILSTNLEQRE D GLCRE
Sbjct: 130 VADQSYEEPMTDSTEEGNLSPGFDVVVGDGSGNLASHDDPEYILSTNLEQREQDPGLCRE 189

Query: 277 NFEDHIAYEPMHSDLELLYEHEMHSYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRL 336
           NFEDHIAYEPMHSDLELLYEHEMHSYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRL
Sbjct: 190 NFEDHIAYEPMHSDLELLYEHEMHSYNHLETEPVLFNDRNIISCPRGKLIKSMFSQKKRL 249

Query: 337 TLVNLDSEEWNHADLRSYLQRDSVSGNRSIVSLSRRRNRLSCRMSGNFVKPRKPGLYQPP 396
           TLVNLDSEEWNHADLRSYLQRDSVSGNRSIVSLSRRRN+LSCRMSGNFVKPRKPGLYQPP
Sbjct: 250 TLVNLDSEEWNHADLRSYLQRDSVSGNRSIVSLSRRRNQLSCRMSGNFVKPRKPGLYQPP 309

Query: 397 LGRRLALQVGKISRGSPPENITFSNGFSQYGSFRHSRQHRPCGHYDEYAPTRPQQTLLNM 456
           LGRRLALQVGKISR SPPENITFSNGFSQYGSFRHSRQHRPCGHYDEYAPT PQQTL NM
Sbjct: 310 LGRRLALQVGKISRVSPPENITFSNGFSQYGSFRHSRQHRPCGHYDEYAPTTPQQTLSNM 369

Query: 457 SRKSISREPVVRDHGFNPKSVPFKGPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSST 516
           SRKSISREPVVRD G NPKSVPFKGPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSST
Sbjct: 370 SRKSISREPVVRDRGLNPKSVPFKGPKTLSQIKEEKRKVEENGGFSIEKRRSIGAASSST 429

Query: 517 NFRGPKPLSDILKDKRKVEEEEEEELVKEMNSNHILL 553
           +FRGPKPLSDILKDKRKVEEEEE  LVKEMN NHILL
Sbjct: 430 DFRGPKPLSDILKDKRKVEEEEE--LVKEMNRNHILL 464

[Close]

BLAST of Cp4.1LG18g04670 vs. TAIR 10
Match: AT2G02160.1 (CCCH-type zinc finger family protein )

HSP 1 Score: 148.3 bits (373), Expect = 1.8e-35
Identity = 68/113 (60.18%), Postives = 77/113 (68.14%), Query Frame = 0


Query: 3   EDLRKRNTDCVYFLASPLTCKKGFDCEYRHSEIARLNPRDCYYWLAGNCLNAACGFRHPP 62
           ED  K NTDCVYFLASPLTCKKG +CEYRHSE AR+NPRDCYYWL GNCLN  CGFRHPP
Sbjct: 26  EDALKWNTDCVYFLASPLTCKKGPECEYRHSEYARMNPRDCYYWLNGNCLNPKCGFRHPP 85

Query: 63  MDSPAGTVLESSQCSV-PVNKTI---------IPCYFYFNGCCSKGDTCSFLH 106
           ++   G    +   SV P++ T          +PC F+  G C KGD CSFLH
Sbjct: 86  LEGLLGNQGGAPAVSVQPIHATAQHPSVAKQPVPCLFFQKGMCMKGDMCSFLH 138

The following BLAST results are available for this feature:

BLAST of Cp4.1LG18g04670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZUM0	2.6e-34	60.18	Zinc finger CCCH domain-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q6AT25	3.4e-34	29.52	Zinc finger CCCH domain-containing protein 34 OS=Oryza sativa subsp. japonica OX...	[more]
Q0J952	8.3e-33	28.14	Zinc finger CCCH domain-containing protein 32 OS=Oryza sativa subsp. japonica OX...	[more]
Q6K977	2.1e-28	26.45	Zinc finger CCCH domain-containing protein 19 OS=Oryza sativa subsp. japonica OX...	[more]
Q5ZJJ1	2.7e-07	29.85	Zinc finger CCCH domain-containing protein 11A OS=Gallus gallus OX=9031 GN=ZC3H1...	[more]

BLAST of Cp4.1LG18g04670 vs. NCBI nr


Match Name	Identity	Description
XP_023516193.1	100.00	zinc finger CCCH domain-containing protein 34-like isoform X1 [Cucurbita pepo su...	[more]
KAG7023534.1	97.83	Zinc finger CCCH domain-containing protein 34, partial [Cucurbita argyrosperma s...	[more]
KAG6589862.1	98.01	Zinc finger CCCH domain-containing protein 34, partial [Cucurbita argyrosperma s...	[more]
XP_022961048.1	97.11	zinc finger CCCH domain-containing protein 34-like isoform X1 [Cucurbita moschat...	[more]
XP_022987654.1	95.66	zinc finger CCCH domain-containing protein 34-like isoform X2 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG18g04670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HAR9	0.0	97.11	zinc finger CCCH domain-containing protein 34-like isoform X1 OS=Cucurbita mosch...	[more]
A0A6J1JJH0	0.0	95.66	zinc finger CCCH domain-containing protein 34-like isoform X2 OS=Cucurbita maxim...	[more]
A0A6J1JK29	0.0	81.64	zinc finger CCCH domain-containing protein 34-like isoform X1 OS=Cucurbita maxim...	[more]
A0A6J1HCV5	0.0	96.74	zinc finger CCCH domain-containing protein 34-like isoform X2 OS=Cucurbita mosch...	[more]
A0A6J1HAV5	1.60e-315	96.72	uncharacterized protein LOC111461673 isoform X3 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Cp4.1LG18g04670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02160.1	1.8e-35	60.18	CCCH-type zinc finger family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 525..545
None	No IPR available	GENE3D	4.10.1000.10		coord: 73..154 e-value: 5.1E-5 score: 25.2 coord: 3..64 e-value: 1.7E-9 score: 39.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 496..553
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..139
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 524..546
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..140
None	No IPR available	PANTHER	PTHR15725:SF0	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 32-LIKE	coord: 1..533
None	No IPR available	PANTHER	PTHR15725	ZN-FINGER, C-X8-C-X5-C-X3-H TYPE-CONTAINING	coord: 1..533
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 7..34 e-value: 0.097 score: 21.8 coord: 39..62 e-value: 0.14 score: 21.3 coord: 82..107 e-value: 0.59 score: 18.1
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 37..63 score: 9.751145
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 6..35 score: 10.511662
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 81..108 score: 12.840159
IPR041686	Zinc-finger CCCH domain	PFAM	PF15663	zf-CCCH_3	coord: 6..63 e-value: 9.6E-11 score: 41.9
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 81..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG18g04670.1	Cp4.1LG18g04670.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding