Cp4.1LG18g04210 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG18g04210
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Location	Cp4.1LG18: 5344489 .. 5345364 (+)
RNA-Seq Expression	Cp4.1LG18g04210
Synteny	Cp4.1LG18g04210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTCCTGAGGACCCTGGCCAGGTGAGGTTTAAATATAATACATTTAATTTTTCATTTTTTTTCAAAAGGCTACGCTACTTGCTCGTACATTCTTAATTGGTAAGGAATCATAAAGTATCCAACTTTATTGACTTGAAATGATCAAAGGTTTTAATAACTATATACATTCTCATTACCCTTGTTTCTTAATCAATAAAGTTTCTTAAAAACACCAAAGTAATCAGCTTTATTCATCCGTTTTCTCTCGTGTTATTGTTTTCACTAGCTCTTGAACGAGAACGGCTTGAACAAAAATGGAGTCTCTCACCAGGTTAGTTCACTGTTAATGGATATTATCAGTTTTGGTCTTGACTTGCATGTAGATTTTAATTTTTCGTTGTTAAATGTATGAAATTGGTCACGTGGGTCTAATAAAAATTTGAACTTTAATTTGTTTTTAGGAGGAAGAGGTAGAGAAGGATCTGAGGAGTAGAGGGTTATGTCTGGTTCCAGTATCCTGCACCCTGCAAGTTGGGAGTGAGAATGGAGCAGATTATTGGGCTCCGACGTTCGGCGGTGGTGGCGGTTTCCGGTAGACGGTGGTGGTGGAAGAATGAAGATGGAGAGAGGTACATTATGAAAGTGATATCATCATGAGCAGTCACTCTGCTAAAGAAACCAAAGGCTGATTGCTCATGATGCTATGCAAACATACTCCAACCTCAAAAATATTATACCAACAGTGTTGTAGCAGATGCCTTTCAAAATCTAATCTTTTCTTAGTAATTGTGGGTTTTTTTTTTCTTTTTTTAATCTTAGTTTATAATTAAAATGTTGATTATTATTATGATGTTTTGATTATCCCCTTCATAATTTGGCTACTCTCTTTCAGCA

mRNA sequence

ATGTTTCCTGAGGACCCTGGCCAGCTCTTGAACGAGAACGGCTTGAACAAAAATGGAGTCTCTCACCAGGAGGAAGAGGTAGAGAAGGATCTGAGGAGTAGAGGGTTATGTCTGGTTCCAGTATCCTGCACCCTGCAAGTTGGGAGTGAGAATGGAGCAGATTATTGGGCTCCGACGTTCGGCGGTGGTGGCGGTTTCCGGTAGACGGTGGTGGTGGAAGAATGAAGATGGAGAGAGGTACATTATGAAAGTGATATCATCATGAGCAGTCACTCTGCTAAAGAAACCAAAGGCTGATTGCTCATGATGCTATGCAAACATACTCCAACCTCAAAAATATTATACCAACAGTGTTGTAGCAGATGCCTTTCAAAATCTAATCTTTTCTTAGTAATTGTGGGTTTTTTTTTTCTTTTTTTAATCTTAGTTTATAATTAAAATGTTGATTATTATTATGATGTTTTGATTATCCCCTTCATAATTTGGCTACTCTCTTTCAGCA

Coding sequence (CDS)

ATGTTTCCTGAGGACCCTGGCCAGCTCTTGAACGAGAACGGCTTGAACAAAAATGGAGTCTCTCACCAGGAGGAAGAGGTAGAGAAGGATCTGAGGAGTAGAGGGTTATGTCTGGTTCCAGTATCCTGCACCCTGCAAGTTGGGAGTGAGAATGGAGCAGATTATTGGGCTCCGACGTTCGGCGGTGGTGGCGGTTTCCGGTAG

Protein sequence

MFPEDPGQLLNENGLNKNGVSHQEEEVEKDLRSRGLCLVPVSCTLQVGSENGADYWAPTFGGGGGFR

Homology

[Close]

BLAST of Cp4.1LG18g04210 vs. ExPASy Swiss-Prot
Match: Q8S3D1 (Transcription factor bHLH68 OS=Arabidopsis thaliana OX=3702 GN=BHLH68 PE=1 SV=2)

HSP 1 Score: 92.4 bits (228), Expect = 2.0e-18
Identity = 43/71 (60.56%), Postives = 52/71 (73.24%), Query Frame = 0


Query: 1   MFPEDPGQLLNENGLNKNGVS-------HQEEEVEKDLRSRGLCLVPVSCTLQVGSENGA 60
           +FPEDPGQL+N+  + + G S       +  EE +KDLRSRGLCLVP+SCTLQVGS+NGA
Sbjct: 335 IFPEDPGQLVNDQCMKRRGASSSSTDNQNASEEPKKDLRSRGLCLVPISCTLQVGSDNGA 394

Query: 61  DYWAPTFGGGG 65
           DYWAP  G  G
Sbjct: 395 DYWAPALGSAG 405

[Close]

BLAST of Cp4.1LG18g04210 vs. ExPASy Swiss-Prot
Match: Q7XHI5 (Transcription factor bHLH133 OS=Arabidopsis thaliana OX=3702 GN=BHLH133 PE=1 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 4.5e-18
Identity = 44/69 (63.77%), Postives = 51/69 (73.91%), Query Frame = 0


Query: 1   MFPEDPGQLLNENGLNK--------NGVSHQEEEVEKDLRSRGLCLVPVSCTLQVGSENG 60
           +FPEDPGQL+NE  + +        N  S+  EE  KDLRSRGLCLVP+SCTLQVGS+NG
Sbjct: 290 IFPEDPGQLVNEYCMKRGVSLSSTDNQKSNPNEEPMKDLRSRGLCLVPISCTLQVGSDNG 349

Query: 61  ADYWAPTFG 62
           ADYWAP FG
Sbjct: 350 ADYWAPAFG 358

[Close]

BLAST of Cp4.1LG18g04210 vs. ExPASy Swiss-Prot
Match: Q94JL3 (Transcription factor bHLH112 OS=Arabidopsis thaliana OX=3702 GN=BHLH112 PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 1.1e-06
Identity = 22/40 (55.00%), Postives = 27/40 (67.50%), Query Frame = 0


Query: 23  QEEEVEKDLRSRGLCLVPVSCTLQVGSENGADYWAPTFGG 63
           Q+E    +LR  GLCLVP+S T  V +E  AD+W PTFGG
Sbjct: 350 QDENENHELRGHGLCLVPISSTFPVANETTADFWTPTFGG 389

[Close]

BLAST of Cp4.1LG18g04210 vs. ExPASy Swiss-Prot
Match: Q9LT67 (Transcription factor bHLH113 OS=Arabidopsis thaliana OX=3702 GN=BHLH113 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 1.4e-06
Identity = 23/34 (67.65%), Postives = 27/34 (79.41%), Query Frame = 0


Query: 29  KDLRSRGLCLVPVSCTLQVGSENGADYWAPTFGG 63
           KDLRSRGLCLVPVS T+ V + NGAD+W+P   G
Sbjct: 226 KDLRSRGLCLVPVSSTVHVENSNGADFWSPATMG 259

[Close]

BLAST of Cp4.1LG18g04210 vs. ExPASy Swiss-Prot
Match: Q8GXT3 (Transcription factor bHLH123 OS=Arabidopsis thaliana OX=3702 GN=BHLH123 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 1.4e-06
Identity = 24/39 (61.54%), Postives = 26/39 (66.67%), Query Frame = 0


Query: 24  EEEVEKDLRSRGLCLVPVSCTLQVGSENGADYWAPTFGG 63
           E   E DLRSRGLCLVPVS T  V  +   D+W PTFGG
Sbjct: 413 EVSEEPDLRSRGLCLVPVSSTFPVTHDTTVDFWTPTFGG 451

[Close]

BLAST of Cp4.1LG18g04210 vs. NCBI nr
Match: XP_023516994.1 (transcription factor bHLH68-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 144 bits (362), Expect = 5.44e-40
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0


Query: 1   MFPEDPGQLLNENGLNKNGVSHQEEEVEKDLRSRGLCLVPVSCTLQVGSENGADYWAPTF 60
           MFPEDPGQLLNENGLNKNGVSHQEEEVEKDLRSRGLCLVPVSCTLQVGSENGADYWAPTF
Sbjct: 279 MFPEDPGQLLNENGLNKNGVSHQEEEVEKDLRSRGLCLVPVSCTLQVGSENGADYWAPTF 338

Query: 61  GGGGGFR 67
           GGGGGFR
Sbjct: 339 GGGGGFR 345

[Close]

BLAST of Cp4.1LG18g04210 vs. NCBI nr
Match: KAG6589928.1 (Transcription factor basic helix-loop-helix 68, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 140 bits (352), Expect = 1.21e-38
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0


Query: 1   MFPEDPGQLLNENGLNKNGVSHQEEEVEKDLRSRGLCLVPVSCTLQVGSENGADYWAPTF 60
           MFPEDPGQLLN+NGLNKNGVSHQEEE EKDLRSRGLCLVPVSCTLQVGSENGADYWAPTF
Sbjct: 264 MFPEDPGQLLNDNGLNKNGVSHQEEEGEKDLRSRGLCLVPVSCTLQVGSENGADYWAPTF 323

Query: 61  GGGGGFR 67
           GGGGGFR
Sbjct: 324 GGGGGFR 330

[Close]

BLAST of Cp4.1LG18g04210 vs. NCBI nr
Match: XP_022961325.1 (transcription factor bHLH68-like [Cucurbita moschata])

HSP 1 Score: 140 bits (352), Expect = 1.71e-38
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0


Query: 1   MFPEDPGQLLNENGLNKNGVSHQEEEVEKDLRSRGLCLVPVSCTLQVGSENGADYWAPTF 60
           MFPEDPGQLLN+NGLNKNGVSHQEEE EKDLRSRGLCLVPVSCTLQVGSENGADYWAPTF
Sbjct: 280 MFPEDPGQLLNDNGLNKNGVSHQEEEGEKDLRSRGLCLVPVSCTLQVGSENGADYWAPTF 339

Query: 61  GGGGGFR 67
           GGGGGFR
Sbjct: 340 GGGGGFR 346

[Close]

BLAST of Cp4.1LG18g04210 vs. NCBI nr
Match: XP_022987777.1 (transcription factor bHLH68-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 136 bits (342), Expect = 4.83e-37
Identity = 62/67 (92.54%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 1   MFPEDPGQLLNENGLNKNGVSHQEEEVEKDLRSRGLCLVPVSCTLQVGSENGADYWAPTF 60
           MFPEDPGQL+N+NGLNKNGVSHQ+EE EKDLR RGLCLVPVSCTLQVGSENGADYWAPTF
Sbjct: 276 MFPEDPGQLVNDNGLNKNGVSHQDEEGEKDLRGRGLCLVPVSCTLQVGSENGADYWAPTF 335

Query: 61  GGGGGFR 67
           GGGGGFR
Sbjct: 336 GGGGGFR 342

[Close]

BLAST of Cp4.1LG18g04210 vs. NCBI nr
Match: XP_023516995.1 (transcription factor bHLH68-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 125 bits (315), Expect = 3.86e-33
Identity = 59/64 (92.19%), Postives = 61/64 (95.31%), Query Frame = 0


Query: 4   EDPGQLLNENGLNKNGVSHQEEEVEKDLRSRGLCLVPVSCTLQVGSENGADYWAPTFGGG 63
           ++   LLNENGLNKNGVSHQEEEVEKDLRSRGLCLVPVSCTLQVGSENGADYWAPTFGGG
Sbjct: 267 QEQHSLLNENGLNKNGVSHQEEEVEKDLRSRGLCLVPVSCTLQVGSENGADYWAPTFGGG 326

Query: 64  GGFR 67
           GGFR
Sbjct: 327 GGFR 330

[Close]

BLAST of Cp4.1LG18g04210 vs. ExPASy TrEMBL
Match: A0A6J1HBU4 (transcription factor bHLH68-like OS=Cucurbita moschata OX=3662 GN=LOC111461848 PE=4 SV=1)

HSP 1 Score: 140 bits (352), Expect = 8.29e-39
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0


Query: 1   MFPEDPGQLLNENGLNKNGVSHQEEEVEKDLRSRGLCLVPVSCTLQVGSENGADYWAPTF 60
           MFPEDPGQLLN+NGLNKNGVSHQEEE EKDLRSRGLCLVPVSCTLQVGSENGADYWAPTF
Sbjct: 280 MFPEDPGQLLNDNGLNKNGVSHQEEEGEKDLRSRGLCLVPVSCTLQVGSENGADYWAPTF 339

Query: 61  GGGGGFR 67
           GGGGGFR
Sbjct: 340 GGGGGFR 346

[Close]

BLAST of Cp4.1LG18g04210 vs. ExPASy TrEMBL
Match: A0A6J1JBA3 (transcription factor bHLH68-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485224 PE=4 SV=1)

HSP 1 Score: 136 bits (342), Expect = 2.34e-37
Identity = 62/67 (92.54%), Postives = 65/67 (97.01%), Query Frame = 0


Query: 1   MFPEDPGQLLNENGLNKNGVSHQEEEVEKDLRSRGLCLVPVSCTLQVGSENGADYWAPTF 60
           MFPEDPGQL+N+NGLNKNGVSHQ+EE EKDLR RGLCLVPVSCTLQVGSENGADYWAPTF
Sbjct: 276 MFPEDPGQLVNDNGLNKNGVSHQDEEGEKDLRGRGLCLVPVSCTLQVGSENGADYWAPTF 335

Query: 61  GGGGGFR 67
           GGGGGFR
Sbjct: 336 GGGGGFR 342

[Close]

BLAST of Cp4.1LG18g04210 vs. ExPASy TrEMBL
Match: A0A5D3E1A1 (Transcription factor bHLH68 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3607G00020 PE=4 SV=1)

HSP 1 Score: 118 bits (295), Expect = 1.51e-31
Identity = 55/65 (84.62%), Postives = 59/65 (90.77%), Query Frame = 0


Query: 1   MFPEDPGQLLNENGLNKNGVSHQEEEVEKDLRSRGLCLVPVSCTLQVGSENGADYWAPTF 60
           +FPEDPGQLLNEN L + GVS QEEE +KDLRSRGLCLVPVSCTLQVGS+NGADYWAP F
Sbjct: 150 VFPEDPGQLLNENCLKRKGVSEQEEEGKKDLRSRGLCLVPVSCTLQVGSDNGADYWAPAF 209

Query: 61  GGGGG 65
           GGGGG
Sbjct: 210 GGGGG 214

[Close]

BLAST of Cp4.1LG18g04210 vs. ExPASy TrEMBL
Match: A0A6J1JKF0 (transcription factor bHLH68-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485224 PE=4 SV=1)

HSP 1 Score: 118 bits (295), Expect = 1.61e-30
Identity = 54/64 (84.38%), Postives = 59/64 (92.19%), Query Frame = 0


Query: 4   EDPGQLLNENGLNKNGVSHQEEEVEKDLRSRGLCLVPVSCTLQVGSENGADYWAPTFGGG 63
           ++   L+N+NGLNKNGVSHQ+EE EKDLR RGLCLVPVSCTLQVGSENGADYWAPTFGGG
Sbjct: 264 QEQHSLVNDNGLNKNGVSHQDEEGEKDLRGRGLCLVPVSCTLQVGSENGADYWAPTFGGG 323

Query: 64  GGFR 67
           GGFR
Sbjct: 324 GGFR 327

[Close]

BLAST of Cp4.1LG18g04210 vs. ExPASy TrEMBL
Match: A0A1S3CHN0 (transcription factor bHLH68 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501031 PE=4 SV=1)

HSP 1 Score: 118 bits (295), Expect = 3.24e-30
Identity = 55/65 (84.62%), Postives = 59/65 (90.77%), Query Frame = 0


Query: 1   MFPEDPGQLLNENGLNKNGVSHQEEEVEKDLRSRGLCLVPVSCTLQVGSENGADYWAPTF 60
           +FPEDPGQLLNEN L + GVS QEEE +KDLRSRGLCLVPVSCTLQVGS+NGADYWAP F
Sbjct: 299 VFPEDPGQLLNENCLKRKGVSEQEEEGKKDLRSRGLCLVPVSCTLQVGSDNGADYWAPAF 358

Query: 61  GGGGG 65
           GGGGG
Sbjct: 359 GGGGG 363

[Close]

BLAST of Cp4.1LG18g04210 vs. TAIR 10
Match: AT4G29100.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 92.4 bits (228), Expect = 1.5e-19
Identity = 43/71 (60.56%), Postives = 52/71 (73.24%), Query Frame = 0


Query: 1   MFPEDPGQLLNENGLNKNGVS-------HQEEEVEKDLRSRGLCLVPVSCTLQVGSENGA 60
           +FPEDPGQL+N+  + + G S       +  EE +KDLRSRGLCLVP+SCTLQVGS+NGA
Sbjct: 335 IFPEDPGQLVNDQCMKRRGASSSSTDNQNASEEPKKDLRSRGLCLVPISCTLQVGSDNGA 394

Query: 61  DYWAPTFGGGG 65
           DYWAP  G  G
Sbjct: 395 DYWAPALGSAG 405

[Close]

BLAST of Cp4.1LG18g04210 vs. TAIR 10
Match: AT2G20100.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 91.3 bits (225), Expect = 3.2e-19
Identity = 44/69 (63.77%), Postives = 51/69 (73.91%), Query Frame = 0


Query: 1   MFPEDPGQLLNENGLNK--------NGVSHQEEEVEKDLRSRGLCLVPVSCTLQVGSENG 60
           +FPEDPGQL+NE  + +        N  S+  EE  KDLRSRGLCLVP+SCTLQVGS+NG
Sbjct: 290 IFPEDPGQLVNEYCMKRGVSLSSTDNQKSNPNEEPMKDLRSRGLCLVPISCTLQVGSDNG 349

Query: 61  ADYWAPTFG 62
           ADYWAP FG
Sbjct: 350 ADYWAPAFG 358

[Close]

BLAST of Cp4.1LG18g04210 vs. TAIR 10
Match: AT1G61660.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 53.5 bits (127), Expect = 7.5e-08
Identity = 22/40 (55.00%), Postives = 27/40 (67.50%), Query Frame = 0


Query: 23  QEEEVEKDLRSRGLCLVPVSCTLQVGSENGADYWAPTFGG 63
           Q+E    +LR  GLCLVP+S T  V +E  AD+W PTFGG
Sbjct: 350 QDENENHELRGHGLCLVPISSTFPVANETTADFWTPTFGG 389

[Close]

BLAST of Cp4.1LG18g04210 vs. TAIR 10
Match: AT1G61660.3 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 53.5 bits (127), Expect = 7.5e-08
Identity = 22/40 (55.00%), Postives = 27/40 (67.50%), Query Frame = 0


Query: 23  QEEEVEKDLRSRGLCLVPVSCTLQVGSENGADYWAPTFGG 63
           Q+E    +LR  GLCLVP+S T  V +E  AD+W PTFGG
Sbjct: 347 QDENENHELRGHGLCLVPISSTFPVANETTADFWTPTFGG 386

[Close]

BLAST of Cp4.1LG18g04210 vs. TAIR 10
Match: AT1G61660.4 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 53.5 bits (127), Expect = 7.5e-08
Identity = 22/40 (55.00%), Postives = 27/40 (67.50%), Query Frame = 0


Query: 23  QEEEVEKDLRSRGLCLVPVSCTLQVGSENGADYWAPTFGG 63
           Q+E    +LR  GLCLVP+S T  V +E  AD+W PTFGG
Sbjct: 328 QDENENHELRGHGLCLVPISSTFPVANETTADFWTPTFGG 367

The following BLAST results are available for this feature:

BLAST of Cp4.1LG18g04210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S3D1	2.0e-18	60.56	Transcription factor bHLH68 OS=Arabidopsis thaliana OX=3702 GN=BHLH68 PE=1 SV=2	[more]
Q7XHI5	4.5e-18	63.77	Transcription factor bHLH133 OS=Arabidopsis thaliana OX=3702 GN=BHLH133 PE=1 SV=...	[more]
Q94JL3	1.1e-06	55.00	Transcription factor bHLH112 OS=Arabidopsis thaliana OX=3702 GN=BHLH112 PE=1 SV=...	[more]
Q9LT67	1.4e-06	67.65	Transcription factor bHLH113 OS=Arabidopsis thaliana OX=3702 GN=BHLH113 PE=2 SV=...	[more]
Q8GXT3	1.4e-06	61.54	Transcription factor bHLH123 OS=Arabidopsis thaliana OX=3702 GN=BHLH123 PE=1 SV=...	[more]

BLAST of Cp4.1LG18g04210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023516994.1	5.44e-40	100.00	transcription factor bHLH68-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
KAG6589928.1	1.21e-38	97.01	Transcription factor basic helix-loop-helix 68, partial [Cucurbita argyrosperma ...	[more]
XP_022961325.1	1.71e-38	97.01	transcription factor bHLH68-like [Cucurbita moschata]	[more]
XP_022987777.1	4.83e-37	92.54	transcription factor bHLH68-like isoform X1 [Cucurbita maxima]	[more]
XP_023516995.1	3.86e-33	92.19	transcription factor bHLH68-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cp4.1LG18g04210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HBU4	8.29e-39	97.01	transcription factor bHLH68-like OS=Cucurbita moschata OX=3662 GN=LOC111461848 P...	[more]
A0A6J1JBA3	2.34e-37	92.54	transcription factor bHLH68-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A5D3E1A1	1.51e-31	84.62	Transcription factor bHLH68 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A6J1JKF0	1.61e-30	84.38	transcription factor bHLH68-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A1S3CHN0	3.24e-30	84.62	transcription factor bHLH68 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501031 P...	[more]

BLAST of Cp4.1LG18g04210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29100.1	1.5e-19	60.56	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G20100.1	3.2e-19	63.77	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G61660.1	7.5e-08	55.00	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G61660.3	7.5e-08	55.00	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G61660.4	7.5e-08	55.00	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG18g04210.1	Cp4.1LG18g04210.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding