Cp4.1LG18g03490 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG18g03490
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	DUF4408 domain-containing protein
Location	Cp4.1LG18: 4927826 .. 4928521 (+)
RNA-Seq Expression	Cp4.1LG18g03490
Synteny	Cp4.1LG18g03490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGACTTCCATAACCACTTGGTTTACTCCCTCCTCCCTTTTCATCCTCGTCAACGCCGTCATCGCCACCATCGCCATCACCTCCCGTTTCACCGACGACAAATCCCACCATCTCCACGGCGGCCCTGTCCTCCTCCGCCCCCCTTCTTTCCTAGAAAGAGTCCGGTCCTTCAACTTCTCCCCCTACAACTACGACCACAATCCGGACCCGGTTTCGGGTCCGGGTCCGACGATGTTGGAGCGGCTCAAATCCATAACCCTCAACAGATCCGATTCAGTTCGTGAACCGGAAACTGCACCGCCGCCGGCAGAACAGAGTCCAGAGAAGACCCATCACGACCATTCCATCAGTCGGAGCAAATCCGAAACCCAAACCCAAACCCAAACCCAAACTCCAGCGACAAGCTTACGGCGGCGGTTGCAGAAATCGCTGAGCGAGAAACTACCGTGGGCGTCGTTCACAACGGCACAGAGCGAAACAGGGGAACTAGTCAGCGAAATTGAACGGCGGCGTCCGGCGACGGCGAGAGCGGAGATTGGAGAACCAGAAACGCAGGAAGACGGCGGCGACGACGACGACAAGGAGGTGGATGTTAGAGCTGACGATTTCATCAACAAATTCAAACAGCAGCTGAAGTTGCAGAGGCTAGAATCTCTGCTGCGTTACAGAGACATGGTGAAGGGCGAAAAATAA

mRNA sequence

ATGTGGACTTCCATAACCACTTGGTTTACTCCCTCCTCCCTTTTCATCCTCGTCAACGCCGTCATCGCCACCATCGCCATCACCTCCCGTTTCACCGACGACAAATCCCACCATCTCCACGGCGGCCCTGTCCTCCTCCGCCCCCCTTCTTTCCTAGAAAGAGTCCGGTCCTTCAACTTCTCCCCCTACAACTACGACCACAATCCGGACCCGGTTTCGGGTCCGGGTCCGACGATGTTGGAGCGGCTCAAATCCATAACCCTCAACAGATCCGATTCAGTTCGTGAACCGGAAACTGCACCGCCGCCGGCAGAACAGAGTCCAGAGAAGACCCATCACGACCATTCCATCAGTCGGAGCAAATCCGAAACCCAAACCCAAACCCAAACCCAAACTCCAGCGACAAGCTTACGGCGGCGGTTGCAGAAATCGCTGAGCGAGAAACTACCGTGGGCGTCGTTCACAACGGCACAGAGCGAAACAGGGGAACTAGTCAGCGAAATTGAACGGCGGCGTCCGGCGACGGCGAGAGCGGAGATTGGAGAACCAGAAACGCAGGAAGACGGCGGCGACGACGACGACAAGGAGGTGGATGTTAGAGCTGACGATTTCATCAACAAATTCAAACAGCAGCTGAAGTTGCAGAGGCTAGAATCTCTGCTGCGTTACAGAGACATGGTGAAGGGCGAAAAATAA

Coding sequence (CDS)

ATGTGGACTTCCATAACCACTTGGTTTACTCCCTCCTCCCTTTTCATCCTCGTCAACGCCGTCATCGCCACCATCGCCATCACCTCCCGTTTCACCGACGACAAATCCCACCATCTCCACGGCGGCCCTGTCCTCCTCCGCCCCCCTTCTTTCCTAGAAAGAGTCCGGTCCTTCAACTTCTCCCCCTACAACTACGACCACAATCCGGACCCGGTTTCGGGTCCGGGTCCGACGATGTTGGAGCGGCTCAAATCCATAACCCTCAACAGATCCGATTCAGTTCGTGAACCGGAAACTGCACCGCCGCCGGCAGAACAGAGTCCAGAGAAGACCCATCACGACCATTCCATCAGTCGGAGCAAATCCGAAACCCAAACCCAAACCCAAACCCAAACTCCAGCGACAAGCTTACGGCGGCGGTTGCAGAAATCGCTGAGCGAGAAACTACCGTGGGCGTCGTTCACAACGGCACAGAGCGAAACAGGGGAACTAGTCAGCGAAATTGAACGGCGGCGTCCGGCGACGGCGAGAGCGGAGATTGGAGAACCAGAAACGCAGGAAGACGGCGGCGACGACGACGACAAGGAGGTGGATGTTAGAGCTGACGATTTCATCAACAAATTCAAACAGCAGCTGAAGTTGCAGAGGCTAGAATCTCTGCTGCGTTACAGAGACATGGTGAAGGGCGAAAAATAA

Protein sequence

MWTSITTWFTPSSLFILVNAVIATIAITSRFTDDKSHHLHGGPVLLRPPSFLERVRSFNFSPYNYDHNPDPVSGPGPTMLERLKSITLNRSDSVREPETAPPPAEQSPEKTHHDHSISRSKSETQTQTQTQTPATSLRRRLQKSLSEKLPWASFTTAQSETGELVSEIERRRPATARAEIGEPETQEDGGDDDDKEVDVRADDFINKFKQQLKLQRLESLLRYRDMVKGEK

Homology

[Close]

BLAST of Cp4.1LG18g03490 vs. ExPASy Swiss-Prot
Match: F4K956 (Pathogen-associated molecular patterns-induced protein A70 OS=Arabidopsis thaliana OX=3702 GN=A70 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 4.3e-15
Identity = 72/195 (36.92%), Postives = 103/195 (52.82%), Query Frame = 0


Query: 49  PSFLERVRSFNFSPYNYDHNPDP--------VSGPG----PTMLERLKSITLN---RSDS 108
           P+ + RV   + S +       P        ++ PG    P++LER+KSI L+   RSD 
Sbjct: 199 PTRMGRVDPIDISKFRIPEEDQPTGTGVNSQINPPGLTRAPSILERVKSIKLSSFYRSDP 258

Query: 109 VREPETAPPPAEQSPEKTHHDHSISRSKSETQTQTQTQTPATSLRRRLQKSLSEKLPWAS 168
             + +  P P        H +H   RSKSE++   + +  A +   ++ KS SEK  +  
Sbjct: 259 DLDQKQNPDPV------LHEEHKHVRSKSESKKPVKKKKKALT---KMTKSASEKSGF-G 318

Query: 169 FTTAQSETGELVSEIERRRPATARAEIGEPETQEDGGDDDDKEVDVRADDFINKFKQQLK 228
           F  + +E  E V  +ERRRP T R      E     GD +D  VD +A DFINKFKQQLK
Sbjct: 319 FAGSHAEAPETVESLERRRPDTTRV-----ERSTSFGDGED-GVDAKASDFINKFKQQLK 377

[Close]

BLAST of Cp4.1LG18g03490 vs. NCBI nr
Match: XP_023516465.1 (uncharacterized protein LOC111780324 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 446 bits (1147), Expect = 1.00e-157
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0


Query: 1   MWTSITTWFTPSSLFILVNAVIATIAITSRFTDDKSHHLHGGPVLLRPPSFLERVRSFNF 60
           MWTSITTWFTPSSLFILVNAVIATIAITSRFTDDKSHHLHGGPVLLRPPSFLERVRSFNF
Sbjct: 1   MWTSITTWFTPSSLFILVNAVIATIAITSRFTDDKSHHLHGGPVLLRPPSFLERVRSFNF 60

Query: 61  SPYNYDHNPDPVSGPGPTMLERLKSITLNRSDSVREPETAPPPAEQSPEKTHHDHSISRS 120
           SPYNYDHNPDPVSGPGPTMLERLKSITLNRSDSVREPETAPPPAEQSPEKTHHDHSISRS
Sbjct: 61  SPYNYDHNPDPVSGPGPTMLERLKSITLNRSDSVREPETAPPPAEQSPEKTHHDHSISRS 120

Query: 121 KSETQTQTQTQTPATSLRRRLQKSLSEKLPWASFTTAQSETGELVSEIERRRPATARAEI 180
           KSETQTQTQTQTPATSLRRRLQKSLSEKLPWASFTTAQSETGELVSEIERRRPATARAEI
Sbjct: 121 KSETQTQTQTQTPATSLRRRLQKSLSEKLPWASFTTAQSETGELVSEIERRRPATARAEI 180

Query: 181 GEPETQEDGGDDDDKEVDVRADDFINKFKQQLKLQRLESLLRYRDMVKGEK 231
           GEPETQEDGGDDDDKEVDVRADDFINKFKQQLKLQRLESLLRYRDMVKGEK
Sbjct: 181 GEPETQEDGGDDDDKEVDVRADDFINKFKQQLKLQRLESLLRYRDMVKGEK 231

[Close]

BLAST of Cp4.1LG18g03490 vs. NCBI nr
Match: KAG7023665.1 (hypothetical protein SDJN02_14691, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 415 bits (1066), Expect = 1.93e-145
Identity = 219/231 (94.81%), Postives = 221/231 (95.67%), Query Frame = 0


Query: 1   MWTSITTWFTPSSLFILVNAVIATIAITSRFTDDKSHHLHGGPVLLRPPSFLERVRSFNF 60
           MWTSITTWFTPSSLFILVNAVIATIAITSRFT DKSHHLHGGPVLLRPPSFLERVRSFNF
Sbjct: 1   MWTSITTWFTPSSLFILVNAVIATIAITSRFTADKSHHLHGGPVLLRPPSFLERVRSFNF 60

Query: 61  SPYNYDHNPDPVSGPGPTMLERLKSITLNRSDSVREPETAPPPAEQSPEKTHHDHSISRS 120
           SPYN DHNPDPV GPGP+ML+RLKSITLNRSDSVREPET PP AEQSPEKTHHDHSISRS
Sbjct: 61  SPYNNDHNPDPVPGPGPSMLKRLKSITLNRSDSVREPETEPPAAEQSPEKTHHDHSISRS 120

Query: 121 KSETQTQTQTQTPATSLRRRLQKSLSEKLPWASFTTAQSETGELVSEIERRRPATARAEI 180
           KSETQTQT    PATSLRRRLQKSLSEKLPWASFTTAQSETGELVSEIERRRPATARAEI
Sbjct: 121 KSETQTQT----PATSLRRRLQKSLSEKLPWASFTTAQSETGELVSEIERRRPATARAEI 180

Query: 181 GEPETQEDGGDDDDKEVDVRADDFINKFKQQLKLQRLESLLRYRDMVKGEK 231
           GEPETQE GGDDDDKEVDVRADDFINKFKQQLKLQRLESLLRYRDMVKGEK
Sbjct: 181 GEPETQEGGGDDDDKEVDVRADDFINKFKQQLKLQRLESLLRYRDMVKGEK 227

[Close]

BLAST of Cp4.1LG18g03490 vs. NCBI nr
Match: XP_022960601.1 (uncharacterized protein LOC111461335 [Cucurbita moschata])

HSP 1 Score: 411 bits (1056), Expect = 6.44e-144
Identity = 218/231 (94.37%), Postives = 219/231 (94.81%), Query Frame = 0


Query: 1   MWTSITTWFTPSSLFILVNAVIATIAITSRFTDDKSHHLHGGPVLLRPPSFLERVRSFNF 60
           MWTSITTWFTPSSLFILVNAVIATIAITSRFT DKSHHLHGGPVLLRPPSFLERVRSFNF
Sbjct: 1   MWTSITTWFTPSSLFILVNAVIATIAITSRFTADKSHHLHGGPVLLRPPSFLERVRSFNF 60

Query: 61  SPYNYDHNPDPVSGPGPTMLERLKSITLNRSDSVREPETAPPPAEQSPEKTHHDHSISRS 120
           SPYN DHNPDPV GPGP+MLERLKSITLNRSDSVREPE  PP AEQSPEKTH DHSISRS
Sbjct: 61  SPYNNDHNPDPVPGPGPSMLERLKSITLNRSDSVREPEIEPPAAEQSPEKTHQDHSISRS 120

Query: 121 KSETQTQTQTQTPATSLRRRLQKSLSEKLPWASFTTAQSETGELVSEIERRRPATARAEI 180
           KSETQTQT    PATSLRRRLQKSLSEKLPWASFTTAQSETGELVSEIERRRPATARAEI
Sbjct: 121 KSETQTQT----PATSLRRRLQKSLSEKLPWASFTTAQSETGELVSEIERRRPATARAEI 180

Query: 181 GEPETQEDGGDDDDKEVDVRADDFINKFKQQLKLQRLESLLRYRDMVKGEK 231
           GEPETQE GGDDDDKEVDVRADDFINKFKQQLKLQRLESLLRYRDMVKGEK
Sbjct: 181 GEPETQEGGGDDDDKEVDVRADDFINKFKQQLKLQRLESLLRYRDMVKGEK 227

[Close]

BLAST of Cp4.1LG18g03490 vs. NCBI nr
Match: XP_022987481.1 (uncharacterized protein LOC111485023 [Cucurbita maxima])

HSP 1 Score: 410 bits (1053), Expect = 2.06e-143
Identity = 218/234 (93.16%), Postives = 222/234 (94.87%), Query Frame = 0


Query: 1   MWTSITTWFTPSSLFILVNAVIATIAITSRFTDDKSHHLHGGPVLLRPPSFLERVRSFNF 60
           MWTSITTWFTPSSLFILVNAVIATIAITSRFT DKSHHLHGGPVLLRPPSFLERVRSFNF
Sbjct: 1   MWTSITTWFTPSSLFILVNAVIATIAITSRFTADKSHHLHGGPVLLRPPSFLERVRSFNF 60

Query: 61  SPYNYDHNPDPVSGPGPTMLERLKSITLNRSDSVREPETAPPPAEQSPEKTHHDHSISRS 120
           SPYNYDHNPDPV GPGP+MLERLKSITLNRSDSVREPETAPP AEQ PEKTHHDHSISRS
Sbjct: 61  SPYNYDHNPDPVPGPGPSMLERLKSITLNRSDSVREPETAPPAAEQIPEKTHHDHSISRS 120

Query: 121 KSETQTQTQTQTPATSLRRRLQKSLSEKLPWASFTTAQSETGELVSEIERRRPATARAEI 180
           KSETQTQT    PATSLRRRLQKSLSEKLPWASFTTAQSETGELVSEIERRRP+TARAEI
Sbjct: 121 KSETQTQT----PATSLRRRLQKSLSEKLPWASFTTAQSETGELVSEIERRRPSTARAEI 180

Query: 181 GEPETQEDGG---DDDDKEVDVRADDFINKFKQQLKLQRLESLLRYRDMVKGEK 231
           GEPETQE GG   D+DDKEVDVRADDFINKFKQQLKLQRLESLLRYRDMVKG+K
Sbjct: 181 GEPETQEGGGGGDDEDDKEVDVRADDFINKFKQQLKLQRLESLLRYRDMVKGKK 230

[Close]

BLAST of Cp4.1LG18g03490 vs. NCBI nr
Match: KAG6590003.1 (Pathogen-associated molecular patterns-induced protein A70, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 407 bits (1045), Expect = 3.06e-142
Identity = 215/231 (93.07%), Postives = 219/231 (94.81%), Query Frame = 0


Query: 1   MWTSITTWFTPSSLFILVNAVIATIAITSRFTDDKSHHLHGGPVLLRPPSFLERVRSFNF 60
           MWTSITTWFTPS LFILVNAVIATIAITSRFT DKSHHLHGGPVLLR PSFL+RV+SFNF
Sbjct: 1   MWTSITTWFTPSFLFILVNAVIATIAITSRFTADKSHHLHGGPVLLRSPSFLDRVKSFNF 60

Query: 61  SPYNYDHNPDPVSGPGPTMLERLKSITLNRSDSVREPETAPPPAEQSPEKTHHDHSISRS 120
           SPYN DHNP+P  GPGPTMLERLKSITLNRSDSVREPETAPP AEQSPEKTHHDHSISRS
Sbjct: 61  SPYNSDHNPNPGPGPGPTMLERLKSITLNRSDSVREPETAPPTAEQSPEKTHHDHSISRS 120

Query: 121 KSETQTQTQTQTPATSLRRRLQKSLSEKLPWASFTTAQSETGELVSEIERRRPATARAEI 180
           KSETQTQT    PATS+RRRLQKSLSEKLPWASFTTAQSETGELVSEIERRRPATARAEI
Sbjct: 121 KSETQTQT----PATSIRRRLQKSLSEKLPWASFTTAQSETGELVSEIERRRPATARAEI 180

Query: 181 GEPETQEDGGDDDDKEVDVRADDFINKFKQQLKLQRLESLLRYRDMVKGEK 231
           GEPETQE GGDDDDKEVDVRADDFINKFKQQLKLQRLESLLRYRDMVKGEK
Sbjct: 181 GEPETQEGGGDDDDKEVDVRADDFINKFKQQLKLQRLESLLRYRDMVKGEK 227

[Close]

BLAST of Cp4.1LG18g03490 vs. ExPASy TrEMBL
Match: A0A6J1H824 (uncharacterized protein LOC111461335 OS=Cucurbita moschata OX=3662 GN=LOC111461335 PE=4 SV=1)

HSP 1 Score: 411 bits (1056), Expect = 3.12e-144
Identity = 218/231 (94.37%), Postives = 219/231 (94.81%), Query Frame = 0


Query: 1   MWTSITTWFTPSSLFILVNAVIATIAITSRFTDDKSHHLHGGPVLLRPPSFLERVRSFNF 60
           MWTSITTWFTPSSLFILVNAVIATIAITSRFT DKSHHLHGGPVLLRPPSFLERVRSFNF
Sbjct: 1   MWTSITTWFTPSSLFILVNAVIATIAITSRFTADKSHHLHGGPVLLRPPSFLERVRSFNF 60

Query: 61  SPYNYDHNPDPVSGPGPTMLERLKSITLNRSDSVREPETAPPPAEQSPEKTHHDHSISRS 120
           SPYN DHNPDPV GPGP+MLERLKSITLNRSDSVREPE  PP AEQSPEKTH DHSISRS
Sbjct: 61  SPYNNDHNPDPVPGPGPSMLERLKSITLNRSDSVREPEIEPPAAEQSPEKTHQDHSISRS 120

Query: 121 KSETQTQTQTQTPATSLRRRLQKSLSEKLPWASFTTAQSETGELVSEIERRRPATARAEI 180
           KSETQTQT    PATSLRRRLQKSLSEKLPWASFTTAQSETGELVSEIERRRPATARAEI
Sbjct: 121 KSETQTQT----PATSLRRRLQKSLSEKLPWASFTTAQSETGELVSEIERRRPATARAEI 180

Query: 181 GEPETQEDGGDDDDKEVDVRADDFINKFKQQLKLQRLESLLRYRDMVKGEK 231
           GEPETQE GGDDDDKEVDVRADDFINKFKQQLKLQRLESLLRYRDMVKGEK
Sbjct: 181 GEPETQEGGGDDDDKEVDVRADDFINKFKQQLKLQRLESLLRYRDMVKGEK 227

[Close]

BLAST of Cp4.1LG18g03490 vs. ExPASy TrEMBL
Match: A0A6J1JED0 (uncharacterized protein LOC111485023 OS=Cucurbita maxima OX=3661 GN=LOC111485023 PE=4 SV=1)

HSP 1 Score: 410 bits (1053), Expect = 9.96e-144
Identity = 218/234 (93.16%), Postives = 222/234 (94.87%), Query Frame = 0


Query: 1   MWTSITTWFTPSSLFILVNAVIATIAITSRFTDDKSHHLHGGPVLLRPPSFLERVRSFNF 60
           MWTSITTWFTPSSLFILVNAVIATIAITSRFT DKSHHLHGGPVLLRPPSFLERVRSFNF
Sbjct: 1   MWTSITTWFTPSSLFILVNAVIATIAITSRFTADKSHHLHGGPVLLRPPSFLERVRSFNF 60

Query: 61  SPYNYDHNPDPVSGPGPTMLERLKSITLNRSDSVREPETAPPPAEQSPEKTHHDHSISRS 120
           SPYNYDHNPDPV GPGP+MLERLKSITLNRSDSVREPETAPP AEQ PEKTHHDHSISRS
Sbjct: 61  SPYNYDHNPDPVPGPGPSMLERLKSITLNRSDSVREPETAPPAAEQIPEKTHHDHSISRS 120

Query: 121 KSETQTQTQTQTPATSLRRRLQKSLSEKLPWASFTTAQSETGELVSEIERRRPATARAEI 180
           KSETQTQT    PATSLRRRLQKSLSEKLPWASFTTAQSETGELVSEIERRRP+TARAEI
Sbjct: 121 KSETQTQT----PATSLRRRLQKSLSEKLPWASFTTAQSETGELVSEIERRRPSTARAEI 180

Query: 181 GEPETQEDGG---DDDDKEVDVRADDFINKFKQQLKLQRLESLLRYRDMVKGEK 231
           GEPETQE GG   D+DDKEVDVRADDFINKFKQQLKLQRLESLLRYRDMVKG+K
Sbjct: 181 GEPETQEGGGGGDDEDDKEVDVRADDFINKFKQQLKLQRLESLLRYRDMVKGKK 230

[Close]

BLAST of Cp4.1LG18g03490 vs. ExPASy TrEMBL
Match: A0A5D3CI46 (DUF761 domain-containing protein/DUF4408 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002150 PE=4 SV=1)

HSP 1 Score: 283 bits (725), Expect = 7.25e-94
Identity = 164/235 (69.79%), Postives = 189/235 (80.43%), Query Frame = 0


Query: 1   MWTSITTWFTPSSLFILVNAVIATIAITSRFTDDKS-HHLHGGPVLLRPPSFLERVRSFN 60
           M TS+TTW TP+SLFI +N VIATIA+TSRFT DKS HHLH G  LLRPPSFL+RV+SFN
Sbjct: 1   MLTSLTTWITPTSLFIFINLVIATIALTSRFTADKSRHHLHTGSPLLRPPSFLDRVKSFN 60

Query: 61  FSPYNYDHNPDPVSGPGPTMLERLKSITLNRSDSVREPETAPPPAE---QSPEKTHHDHS 120
           F+ ++ ++ P+P  G  P+ML+RLKSIT+NRSDS+R+PE   P AE   Q+PE+ H DHS
Sbjct: 61  FTLHDSNYYPNPYPGRTPSMLDRLKSITINRSDSIRQPEPPQPAAETVVQTPEEIHQDHS 120

Query: 121 ISRSKSETQTQTQTQTPATSLRRRLQKSLSEKLPWASFTTAQSETGELVSEIERRRPATA 180
           +SRSKSET T T    PATSLRRRLQKSLSEKL W S TT QSET ELV+EIERRRPAT 
Sbjct: 121 VSRSKSETVTLT----PATSLRRRLQKSLSEKLSWVSSTTGQSETEELVNEIERRRPATV 180

Query: 181 RAEIGEPETQEDGGDDDDKEVDVRADDFINKFKQQLKLQRLESLLRYRDMVKGEK 231
           RAE  EPET+E G    ++EVD RADDFINKFKQQLKLQRLESLLRYRDMV G+K
Sbjct: 181 RAE--EPETKEGG----EEEVDSRADDFINKFKQQLKLQRLESLLRYRDMVTGKK 225

[Close]

BLAST of Cp4.1LG18g03490 vs. ExPASy TrEMBL
Match: A0A5A7UQD5 (DUF761 domain-containing protein/DUF4408 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G002200 PE=4 SV=1)

HSP 1 Score: 282 bits (721), Expect = 2.94e-93
Identity = 164/235 (69.79%), Postives = 189/235 (80.43%), Query Frame = 0


Query: 1   MWTSITTWFTPSSLFILVNAVIATIAITSRFTDDKS-HHLHGGPVLLRPPSFLERVRSFN 60
           M TS+TTW TP+SLFI +N VIATIAITSRFT DKS HHLH G  LLRPPSFL+RV+SFN
Sbjct: 1   MLTSLTTWITPTSLFIFINLVIATIAITSRFTADKSRHHLHTGSPLLRPPSFLDRVKSFN 60

Query: 61  FSPYNYDHNPDPVSGPGPTMLERLKSITLNRSDSVREPETAPPPAE---QSPEKTHHDHS 120
           F+ ++ ++ P+P  G  P+ML+RLKSI++NRSDS+R+PE   P AE   Q+PE+ H DHS
Sbjct: 61  FTLHDSNYYPNPDPGRTPSMLDRLKSISINRSDSIRQPEPPQPAAETVVQTPEEIHQDHS 120

Query: 121 ISRSKSETQTQTQTQTPATSLRRRLQKSLSEKLPWASFTTAQSETGELVSEIERRRPATA 180
           +SRSKSET T T    PATSLRRRLQKSLSEKL W S TT QSET ELV+EIERRRPAT 
Sbjct: 121 VSRSKSETVTLT----PATSLRRRLQKSLSEKLSWVSSTTGQSETEELVNEIERRRPATV 180

Query: 181 RAEIGEPETQEDGGDDDDKEVDVRADDFINKFKQQLKLQRLESLLRYRDMVKGEK 231
           RAE  EPET+E G    ++EVD RADDFINKFKQQLKLQRLESLLRYRDMV G+K
Sbjct: 181 RAE--EPETKEGG----EEEVDSRADDFINKFKQQLKLQRLESLLRYRDMVTGKK 225

[Close]

BLAST of Cp4.1LG18g03490 vs. ExPASy TrEMBL
Match: A0A1S4DYA9 (uncharacterized protein LOC107991122 OS=Cucumis melo OX=3656 GN=LOC107991122 PE=4 SV=1)

HSP 1 Score: 282 bits (721), Expect = 2.94e-93
Identity = 164/235 (69.79%), Postives = 189/235 (80.43%), Query Frame = 0


Query: 1   MWTSITTWFTPSSLFILVNAVIATIAITSRFTDDKS-HHLHGGPVLLRPPSFLERVRSFN 60
           M TS+TTW TP+SLFI +N VIATIAITSRFT DKS HHLH G  LLRPPSFL+RV+SFN
Sbjct: 1   MLTSLTTWITPTSLFIFINLVIATIAITSRFTADKSRHHLHTGSPLLRPPSFLDRVKSFN 60

Query: 61  FSPYNYDHNPDPVSGPGPTMLERLKSITLNRSDSVREPETAPPPAE---QSPEKTHHDHS 120
           F+ ++ ++ P+P  G  P+ML+RLKSI++NRSDS+R+PE   P AE   Q+PE+ H DHS
Sbjct: 61  FTLHDSNYYPNPDPGRTPSMLDRLKSISINRSDSIRQPEPPQPAAETVVQTPEEIHQDHS 120

Query: 121 ISRSKSETQTQTQTQTPATSLRRRLQKSLSEKLPWASFTTAQSETGELVSEIERRRPATA 180
           +SRSKSET T T    PATSLRRRLQKSLSEKL W S TT QSET ELV+EIERRRPAT 
Sbjct: 121 VSRSKSETVTLT----PATSLRRRLQKSLSEKLSWVSSTTGQSETEELVNEIERRRPATV 180

Query: 181 RAEIGEPETQEDGGDDDDKEVDVRADDFINKFKQQLKLQRLESLLRYRDMVKGEK 231
           RAE  EPET+E G    ++EVD RADDFINKFKQQLKLQRLESLLRYRDMV G+K
Sbjct: 181 RAE--EPETKEGG----EEEVDSRADDFINKFKQQLKLQRLESLLRYRDMVTGKK 225

[Close]

BLAST of Cp4.1LG18g03490 vs. TAIR 10
Match: AT4G26130.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G56980.1); Has 121 Blast hits to 116 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 113; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 104.0 bits (258), Expect = 1.7e-22
Identity = 92/290 (31.72%), Postives = 135/290 (46.55%), Query Frame = 0


Query: 3   TSITTWFTPSSLFILVNAVIATIAITSRFTD-DKSHHLH-----------GGPVLLRPPS 62
           TS+T W TP++LF+L+N  IATI IT+RF+   + H+ H                 RPPS
Sbjct: 5   TSLTNWLTPTTLFLLLNFTIATIFITNRFSSCSRKHNQHQDGYGSSGHDQNQARFGRPPS 64

Query: 63  FLERVRSFNFSPYN--------YDHNPDPVSGPGPTMLERLKSITL-------------- 122
            ++RV+S NF  YN        +    DP   P P++L+R+KSI +              
Sbjct: 65  LIDRVKSINFHLYNSPSPESEIHYSGSDPNPNPPPSLLQRVKSINMPYFKFPQHNSEGDY 124

Query: 123 ------------NR---SDSVREPETAPPPAEQSPEKTHHDHSIS-------------RS 182
                       NR    D + E +    P   +P       SI                
Sbjct: 125 AAYELMTQPDETNRVDPIDKIPEDDVTTEPRFGAPSLLQRVKSIKLPSLYRSDPDPTPEV 184

Query: 183 KSETQTQTQTQTPATSLRRRLQKSLSEKLPWASFTTAQSETGELVSEIERRRPATARAEI 231
           ++ T+T++++  PAT  +++  K + +    AS      E  E V  +E+RRP T R   
Sbjct: 185 QTHTRTKSESSKPATKKKKKATKKMMKS---ASERHIGREEEETVEAVEKRRPETMRV-- 244

[Close]

BLAST of Cp4.1LG18g03490 vs. TAIR 10
Match: AT2G26110.1 (Protein of unknown function (DUF761) )

HSP 1 Score: 91.7 bits (226), Expect = 8.5e-19
Identity = 87/280 (31.07%), Postives = 135/280 (48.21%), Query Frame = 0


Query: 3   TSITTWFTPSSLFILVNAVIATIAITSRFTDDKSHHLHGGPVLLRPPSFLERVRSFNFSP 62
           T++ +WFTP+ LF+ +N +I TIAI+S F+   +        + R PS + R++S NFS 
Sbjct: 43  TAMYSWFTPTVLFVFLNLMIGTIAISSSFSSKSND--PNQTQIQRSPSMIHRLKSINFSS 102

Query: 63  Y--------------------NYDHNP------DPVSGPGPTMLERLKSITLNRSDSVRE 122
           +                    N  H P       P     P++L R+KS  L    S +E
Sbjct: 103 FTSPDKSHLEFPPSTPEDNSNNNFHQPASIEQNQPFLSRSPSVLHRIKSFNLYNYIS-QE 162

Query: 123 P----ETAPPPA---------------------EQSPEKTHHD---HSISRSKSETQTQT 182
           P    E +PP                       EQS E+ +     + ++R+KS+T+   
Sbjct: 163 PTNIIEASPPSVTVETKQEQVQEQEVKEEQEEEEQSLEEVYSKLNLNHVARTKSDTEPAA 222

Query: 183 QTQTPATSLRRRLQKSLSEKLPWASFTTAQSETGELVSEIERRRPATARAEIGEPETQED 229
             + P   L ++++KS S K P++ F        E    +E RRPAT +  +    T E+
Sbjct: 223 GIRPP--KLPKKMKKSASTKSPFSHFQ-------EDEISVEARRPATVK--VPRVTTVEE 282

[Close]

BLAST of Cp4.1LG18g03490 vs. TAIR 10
Match: AT5G56980.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26130.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 83.2 bits (204), Expect = 3.0e-16
Identity = 72/195 (36.92%), Postives = 103/195 (52.82%), Query Frame = 0


Query: 49  PSFLERVRSFNFSPYNYDHNPDP--------VSGPG----PTMLERLKSITLN---RSDS 108
           P+ + RV   + S +       P        ++ PG    P++LER+KSI L+   RSD 
Sbjct: 199 PTRMGRVDPIDISKFRIPEEDQPTGTGVNSQINPPGLTRAPSILERVKSIKLSSFYRSDP 258

Query: 109 VREPETAPPPAEQSPEKTHHDHSISRSKSETQTQTQTQTPATSLRRRLQKSLSEKLPWAS 168
             + +  P P        H +H   RSKSE++   + +  A +   ++ KS SEK  +  
Sbjct: 259 DLDQKQNPDPV------LHEEHKHVRSKSESKKPVKKKKKALT---KMTKSASEKSGF-G 318

Query: 169 FTTAQSETGELVSEIERRRPATARAEIGEPETQEDGGDDDDKEVDVRADDFINKFKQQLK 228
           F  + +E  E V  +ERRRP T R      E     GD +D  VD +A DFINKFKQQLK
Sbjct: 319 FAGSHAEAPETVESLERRRPDTTRV-----ERSTSFGDGED-GVDAKASDFINKFKQQLK 377

The following BLAST results are available for this feature:

BLAST of Cp4.1LG18g03490 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4K956	4.3e-15	36.92	Pathogen-associated molecular patterns-induced protein A70 OS=Arabidopsis thalia...	[more]

BLAST of Cp4.1LG18g03490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023516465.1	1.00e-157	100.00	uncharacterized protein LOC111780324 [Cucurbita pepo subsp. pepo]	[more]
KAG7023665.1	1.93e-145	94.81	hypothetical protein SDJN02_14691, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022960601.1	6.44e-144	94.37	uncharacterized protein LOC111461335 [Cucurbita moschata]	[more]
XP_022987481.1	2.06e-143	93.16	uncharacterized protein LOC111485023 [Cucurbita maxima]	[more]
KAG6590003.1	3.06e-142	93.07	Pathogen-associated molecular patterns-induced protein A70, partial [Cucurbita a...	[more]

BLAST of Cp4.1LG18g03490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H824	3.12e-144	94.37	uncharacterized protein LOC111461335 OS=Cucurbita moschata OX=3662 GN=LOC1114613...	[more]
A0A6J1JED0	9.96e-144	93.16	uncharacterized protein LOC111485023 OS=Cucurbita maxima OX=3661 GN=LOC111485023...	[more]
A0A5D3CI46	7.25e-94	69.79	DUF761 domain-containing protein/DUF4408 domain-containing protein OS=Cucumis me...	[more]
A0A5A7UQD5	2.94e-93	69.79	DUF761 domain-containing protein/DUF4408 domain-containing protein OS=Cucumis me...	[more]
A0A1S4DYA9	2.94e-93	69.79	uncharacterized protein LOC107991122 OS=Cucumis melo OX=3656 GN=LOC107991122 PE=...	[more]

BLAST of Cp4.1LG18g03490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26130.1	1.7e-22	31.72	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G26110.1	8.5e-19	31.07	Protein of unknown function (DUF761)	[more]
AT5G56980.1	3.0e-16	36.92	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008480	Protein of unknown function DUF761, plant	PFAM	PF05553	DUF761	coord: 194..228 e-value: 2.4E-16 score: 59.0
IPR025520	Domain of unknown function DUF4408	PFAM	PF14364	DUF4408	coord: 1..31 e-value: 1.8E-9 score: 37.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..198
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..184
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..163
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..140
None	No IPR available	PANTHER	PTHR33098	COTTON FIBER (DUF761)	coord: 1..66
None	No IPR available	PANTHER	PTHR33098	COTTON FIBER (DUF761)	coord: 74..229
None	No IPR available	PANTHER	PTHR33098:SF57	DUF4408 DOMAIN PROTEIN	coord: 1..66 coord: 74..229

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG18g03490.1	Cp4.1LG18g03490.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane