Cp4.1LG18g03420 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG18g03420
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	WD repeat-containing protein VIP3
Location	Cp4.1LG18: 4841609 .. 4843904 (-)
RNA-Seq Expression	Cp4.1LG18g03420
Synteny	Cp4.1LG18g03420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAACTCGCCGGTCTCAAATCCGTTGAGAACGCTCACGAAGAGTCTGTATGGGCGGCGACTTGGATTCCGGCCACCGACAATCGCCCTTCCCTCCTCGTCACTGGCTCCCTTGACGAGACCGTCAAGCTCTGGAAGTCTGACGAACTCGACTTGGACCGCACCAACACTGGCCACTGCCTCGGCGTTGTTTCTGTTGCTGCTCATCCTTCCGGTTACATTGCTGCCTCTGCTTCCCTCGACAGCTTTGTTCGCATATTTGAGGTCGATTCCAACTCCACAATCGCCACTCTTGAGGCACCGCCTTCTGAGGTCTGGCAAATGCGCTTCAATCCCGAGGTAGTTTCTTGCGACTTTTTTGCTTTGAATTCTCGGTGTTTTGATTTTTGTTCTTTTCTGAATTTTCTTTTGCTGCTCACTTATTTGAGGATGAAGTTAAGAATTTGAGATTGTTTTGCCGTTTACGGATAGCACTCAACTTGTTTGGCTGTGATTTTTGTGATTCAGATCGTCTACTTTTTATTAGAGGATTTTGCTAAGAATTTAAAACTATTTTTCCGTTCACGTAACCTGATTTGGACATGAAAGTTCTCTATTGCAATAATCTTCCAATAGCTTTTGCATTTGCTTGTGTCATTTAGTGCTGTGTAGTTACTTAGATCTTATAAATTTTCATGAGGAAGAAAGCTCCCTGGATTCAATTATCTTTAGAAGTTACCTTCCCAGCCAAATTTAACAACTAAATAAGTTACATTGTCTAGTGAGAATAATCAAGAACGGAGACTCACAGATATCTAAAAAAACAAGTTATTATCCTTAGTGTTCATATCTCTCTGTTAGAAATGCGAATCTAGATAGTAGCTTCTTCATTTGTTATGGTTCTTTCTTTGTGCAACTTACAAGATGCCTGATTTATTGAATTTCAGTTTGATCACCGACTTTCTTCTCAAAAAAGTTGGTAAATTGACTTGATTCTTAAATGAATGAAATGTCTGTCGATGACTGTGGTATGGTGAAGTATAGCTGCTCATTGGTCATTTTTTTCACCAGTATATCTTTATTCATTTAACTCGGATCAACGGTTCGCTTTTATTGAAATTTTACTGAAACGAAGGTTGTCTATCAATTATTTTCATATGCAAATTAGCCCTTTAAATGCAGGAATTGGAATGCCATTTGTGACGGTGACCCTTGATAGATGTTGATTGTTAACAAATATTTCATCACGATTACTATCGTAGTTTATAGTCGACAAAAACAGAGAAAAAATATCATGCCTTTAGTGTTGTGTTGTTCGAAACGTTTGCATTTTCTGCTTGTTGTGCACATAGGTAATTCTAATGGTTCTCTTCACATTAGGACATATGTCAATAGCTGTGAACATTCCTAACTCAATTCTTTTTTATATGCTCGAACTCGTGGTTCCAGTGGGCTTATCAATTTATCAGAACATTGTTTGTTATCATATATGAAACCTTGCATTGTTTTAGCTTTATGAAAACCTGTTGTTTCTTCCAAAATAGCAACTTTGTTCTTTATGTTCATAAACTTAGCTAAATCAAGGAGAGCAATGTTTCAGTTTTGTTCACTCTGACCAGAAAAGAAAAACCACAAAAATCAGTTGATCTGTTTCACAGTTCATGCCCAAACTTAACAGTAACCTTTGCATCAGGGTACCATGTTAGCAGTTGCTGGTGGAGGTAGCGCATCAATTAAGATTTGGGACACAAGCACATGGAAGCTGGCTGCAACTCTATCAATTCCTCGCCCAGAAGGACCTAAGCCCACTGATAAAACTGCTAGCAAGAAGTTTGTACTTTCAGTAGCATGGAGCGTTGATGGGAGGAGACTTGCATGCGGTTCAATGGATGGAACCATTTCAGTCTTTGATGTAGCTCGCGCAAAGTTCCTACACCACTTGGAAGGCCACTTCATGCCGGTGAGATCCCTTGTGTATTCGCCTGTTGAGCCACGGCTACTCTTCTCAGCCTCGGACGATGCTCATGTGCACATGTATGATGCGGAAGGGAAAACTCTGATTGGAGCCATGTCCGGCCATTCAAGCTGGGTATTGAGTGTTGATGCAAGCCCTGATGGCGCTGCTGTTGCAACAGGCTCTAGCGACAGAACTGTTAGGCTTTGGGATCTCAACATGAGGACCGCCGTTCAGACAATGACTAACCATAGTGATCAGGTCTGGGGGGTTGCGTTTCGACCACCTGGTGCTGGCGTTCGGTCTGGTCGACTTGCTAGTGTGTCTGATGACAAGAGCATCTCCCTTTATGATTATTCTTGA

mRNA sequence

ATGAAACTCGCCGGTCTCAAATCCGTTGAGAACGCTCACGAAGAGTCTGTATGGGCGGCGACTTGGATTCCGGCCACCGACAATCGCCCTTCCCTCCTCGTCACTGGCTCCCTTGACGAGACCGTCAAGCTCTGGAAGTCTGACGAACTCGACTTGGACCGCACCAACACTGGCCACTGCCTCGGCGTTGTTTCTGTTGCTGCTCATCCTTCCGGTTACATTGCTGCCTCTGCTTCCCTCGACAGCTTTGTTCGCATATTTGAGGTCGATTCCAACTCCACAATCGCCACTCTTGAGGCACCGCCTTCTGAGGTCTGGCAAATGCGCTTCAATCCCGAGGGTACCATGTTAGCAGTTGCTGGTGGAGGTAGCGCATCAATTAAGATTTGGGACACAAGCACATGGAAGCTGGCTGCAACTCTATCAATTCCTCGCCCAGAAGGACCTAAGCCCACTGATAAAACTGCTAGCAAGAAGTTTGTACTTTCAGTAGCATGGAGCGTTGATGGGAGGAGACTTGCATGCGGTTCAATGGATGGAACCATTTCAGTCTTTGATGTAGCTCGCGCAAAGTTCCTACACCACTTGGAAGGCCACTTCATGCCGGTGAGATCCCTTGTGTATTCGCCTGTTGAGCCACGGCTACTCTTCTCAGCCTCGGACGATGCTCATGTGCACATGTATGATGCGGAAGGGAAAACTCTGATTGGAGCCATGTCCGGCCATTCAAGCTGGGTATTGAGTGTTGATGCAAGCCCTGATGGCGCTGCTGTTGCAACAGGCTCTAGCGACAGAACTGTTAGGCTTTGGGATCTCAACATGAGGACCGCCGTTCAGACAATGACTAACCATAGTGATCAGGTCTGGGGGGTTGCGTTTCGACCACCTGGTGCTGGCGTTCGGTCTGGTCGACTTGCTAGTGTGTCTGATGACAAGAGCATCTCCCTTTATGATTATTCTTGA

Coding sequence (CDS)

ATGAAACTCGCCGGTCTCAAATCCGTTGAGAACGCTCACGAAGAGTCTGTATGGGCGGCGACTTGGATTCCGGCCACCGACAATCGCCCTTCCCTCCTCGTCACTGGCTCCCTTGACGAGACCGTCAAGCTCTGGAAGTCTGACGAACTCGACTTGGACCGCACCAACACTGGCCACTGCCTCGGCGTTGTTTCTGTTGCTGCTCATCCTTCCGGTTACATTGCTGCCTCTGCTTCCCTCGACAGCTTTGTTCGCATATTTGAGGTCGATTCCAACTCCACAATCGCCACTCTTGAGGCACCGCCTTCTGAGGTCTGGCAAATGCGCTTCAATCCCGAGGGTACCATGTTAGCAGTTGCTGGTGGAGGTAGCGCATCAATTAAGATTTGGGACACAAGCACATGGAAGCTGGCTGCAACTCTATCAATTCCTCGCCCAGAAGGACCTAAGCCCACTGATAAAACTGCTAGCAAGAAGTTTGTACTTTCAGTAGCATGGAGCGTTGATGGGAGGAGACTTGCATGCGGTTCAATGGATGGAACCATTTCAGTCTTTGATGTAGCTCGCGCAAAGTTCCTACACCACTTGGAAGGCCACTTCATGCCGGTGAGATCCCTTGTGTATTCGCCTGTTGAGCCACGGCTACTCTTCTCAGCCTCGGACGATGCTCATGTGCACATGTATGATGCGGAAGGGAAAACTCTGATTGGAGCCATGTCCGGCCATTCAAGCTGGGTATTGAGTGTTGATGCAAGCCCTGATGGCGCTGCTGTTGCAACAGGCTCTAGCGACAGAACTGTTAGGCTTTGGGATCTCAACATGAGGACCGCCGTTCAGACAATGACTAACCATAGTGATCAGGTCTGGGGGGTTGCGTTTCGACCACCTGGTGCTGGCGTTCGGTCTGGTCGACTTGCTAGTGTGTCTGATGACAAGAGCATCTCCCTTTATGATTATTCTTGA

Protein sequence

MKLAGLKSVENAHEESVWAATWIPATDNRPSLLVTGSLDETVKLWKSDELDLDRTNTGHCLGVVSVAAHPSGYIAASASLDSFVRIFEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVAGGGSASIKIWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDGTISVFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMSGHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGAGVRSGRLASVSDDKSISLYDYS

Homology

[Close]

BLAST of Cp4.1LG18g03420 vs. ExPASy Swiss-Prot
Match: Q9SZQ5 (WD repeat-containing protein VIP3 OS=Arabidopsis thaliana OX=3702 GN=VIP3 PE=1 SV=1)

HSP 1 Score: 535.0 bits (1377), Expect = 5.7e-151
Identity = 251/321 (78.19%), Postives = 296/321 (92.21%), Query Frame = 0


Query: 1   MKLAGLKSVENAHEESVWAATWIPATDNRPSLLVTGSLDETVKLWKSDELDLDRTNTGHC 60
           MKLAGLKS+ENAHE+SVWAATW+PAT++RP+LL+TGSLDETVKLW+ DELDL RTNTGH 
Sbjct: 1   MKLAGLKSIENAHEDSVWAATWVPATEDRPALLLTGSLDETVKLWRPDELDLVRTNTGHS 60

Query: 61  LGVVSVAAHPSGYIAASASLDSFVRIFEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVA 120
           LGV ++AAHPSG IAAS+S+DSFVR+F+VD+N+TIA LEAPPSEVW M+F P+GT+LAVA
Sbjct: 61  LGVAALAAHPSGIIAASSSIDSFVRVFDVDTNATIAVLEAPPSEVWGMQFEPKGTILAVA 120

Query: 121 GGGSASIKIWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDG 180
           GG SAS+K+WDT++W+L +TLSIPRP+ PKP+DKT+SKKFVLSVAWS +G+RLACGSMDG
Sbjct: 121 GGSSASVKLWDTASWRLISTLSIPRPDAPKPSDKTSSKKFVLSVAWSPNGKRLACGSMDG 180

Query: 181 TISVFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS 240
           TI VFDV R+K LH LEGH MPVRSLV+SPV+PR+LFS SDD HV+M+DAEGKTL+G+MS
Sbjct: 181 TICVFDVDRSKLLHQLEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHDAEGKTLLGSMS 240

Query: 241 GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPP-GAG 300
           GH+SWVLSVDASPDG A+ATGSSDRTVRLWDL MR A+QTM+NH+DQVW VAFRPP G G
Sbjct: 241 GHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSVAFRPPGGTG 300

Query: 301 VRSGRLASVSDDKSISLYDYS 321
           VR+GRLASVSDDKS+SLYDYS
Sbjct: 301 VRAGRLASVSDDKSVSLYDYS 321

[Close]

BLAST of Cp4.1LG18g03420 vs. ExPASy Swiss-Prot
Match: Q6PBD6 (WD repeat-containing protein 61 OS=Xenopus tropicalis OX=8364 GN=wdr61 PE=2 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 8.1e-65
Identity = 128/311 (41.16%), Postives = 195/311 (62.70%), Query Frame = 0


Query: 10  ENAHEESVWAATWIPATDNRPSLLVTGSLDETVKLWK-SDE-LDLDRTNTGHCLGVVSVA 69
           E+AHE+++W+  W   +++   L+++GSLD+ VK+WK SDE L+L  T  GH LGVVSV 
Sbjct: 12  EHAHEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLELQSTLEGHQLGVVSVD 71

Query: 70  AHPSGYIAASASLDSFVRIFEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVAGGGSASI 129
             PSG I AS+SLD+ +R+++++S   I  ++A P + W + F+P+   LA  G     +
Sbjct: 72  VSPSGNIMASSSLDAHIRLWDLESGKQIRAIDAGPVDAWSVAFSPDSQHLA-TGSHVGKV 131

Query: 130 KIWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDGTISVFDV 189
            I+   T             G K        KF+LS+A+S DG+ LA G++DG I++FD+
Sbjct: 132 NIFGVET-------------GKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 191

Query: 190 ARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMSGHSSWVL 249
           A  K LH LEGH MP+RSL +SP + +LL +ASDD ++ +Y+ +  +L   +SGH SWVL
Sbjct: 192 ATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYEVQHASLAATLSGHGSWVL 251

Query: 250 SVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGAGVRSGRLAS 309
           +V  SPD     + SSD++V++WD++ RT V T  +H DQVWGV +   G+     ++ S
Sbjct: 252 NVAFSPDDTHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNKNGS-----KIVS 302

Query: 310 VSDDKSISLYD 319
           V+DD+ I +YD
Sbjct: 312 VADDQEIHVYD 302

[Close]

BLAST of Cp4.1LG18g03420 vs. ExPASy Swiss-Prot
Match: Q6P5M2 (WD repeat-containing protein 61 OS=Danio rerio OX=7955 GN=wdr61 PE=2 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 6.9e-64
Identity = 126/311 (40.51%), Postives = 192/311 (61.74%), Query Frame = 0


Query: 10  ENAHEESVWAATWIPATDNRPSLLVTGSLDETVKLWK-SDE-LDLDRTNTGHCLGVVSVA 69
           E+AHE+++W A W  +  +    +VTGSLD+ VK+WK SDE L+L  T  GH LGVVSV 
Sbjct: 12  EHAHEDAIWTAAWGRSEKDGSETIVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVN 71

Query: 70  AHPSGYIAASASLDSFVRIFEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVAGGGSASI 129
              +G IAAS+SLD+ +R++++++   I +++A P + W + F+P+   +A  G     +
Sbjct: 72  ISQNGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWTVAFSPDSKYIA-TGSHLGKV 131

Query: 130 KIWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDGTISVFDV 189
            I+   +             G K        KF+LS+A+S DG+ LA G++DG I++FD+
Sbjct: 132 NIFGVES-------------GKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 191

Query: 190 ARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMSGHSSWVL 249
           A  K LH LEGH MP+RSL +SP + +LL +ASDD ++ +YD +   L G +SGH SWVL
Sbjct: 192 ATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVL 251

Query: 250 SVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGAGVRSGRLAS 309
           SV  SPD     + SSD+++++WD + R+ V T  +H DQVW V + P G+     ++ S
Sbjct: 252 SVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWSVKYNPTGS-----KIVS 302

Query: 310 VSDDKSISLYD 319
             DD++I +YD
Sbjct: 312 AGDDRAIHIYD 302

[Close]

BLAST of Cp4.1LG18g03420 vs. ExPASy Swiss-Prot
Match: Q6GMD2 (WD repeat-containing protein 61 OS=Xenopus laevis OX=8355 GN=wdr61 PE=2 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 9.0e-64
Identity = 127/311 (40.84%), Postives = 194/311 (62.38%), Query Frame = 0


Query: 10  ENAHEESVWAATWIPATDNRPSLLVTGSLDETVKLWK-SDE-LDLDRTNTGHCLGVVSVA 69
           E+AHE+++W+  W   +++   L+++GSLD+ VK+WK SDE L++     GH LGVVSV 
Sbjct: 12  EHAHEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLEMQWALEGHQLGVVSVD 71

Query: 70  AHPSGYIAASASLDSFVRIFEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVAGGGSASI 129
             PSG I AS+SLD+ +R+++++S   I +++A P + W + F+P+   LA  G     +
Sbjct: 72  VSPSGNIMASSSLDAHIRLWDLESGKQIRSIDAGPVDAWSVAFSPDSQHLA-TGSHVGKV 131

Query: 130 KIWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDGTISVFDV 189
            I+   T             G K        KF+LS+A+S DG+ LA G++DG I++FD+
Sbjct: 132 NIFGVET-------------GKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 191

Query: 190 ARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMSGHSSWVL 249
           A  K LH LEGH MP+RSL +S  + +LL +ASDD ++ +YD +  +L   +SGH SWVL
Sbjct: 192 ATGKLLHTLEGHAMPIRSLTFS-TDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVL 251

Query: 250 SVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGAGVRSGRLAS 309
           +V  SPD A   + SSD++V++WD++ RT V T  +H DQVWGV +   G+     ++ S
Sbjct: 252 NVAFSPDDAHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNRNGS-----KIVS 302

Query: 310 VSDDKSISLYD 319
           V DD+ I +YD
Sbjct: 312 VGDDQEIHVYD 302

[Close]

BLAST of Cp4.1LG18g03420 vs. ExPASy Swiss-Prot
Match: Q5ZJH5 (WD repeat-containing protein 61 OS=Gallus gallus OX=9031 GN=WDR61 PE=2 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 2.0e-63
Identity = 124/311 (39.87%), Postives = 187/311 (60.13%), Query Frame = 0


Query: 10  ENAHEESVWAATWIPATDNRPSLLVTGSLDETVKLWK--SDELDLDRTNTGHCLGVVSVA 69
           E AH++++W+  W     N    +++GSLD+ VK+WK   ++LDL  T  GH LGVVSV 
Sbjct: 12  EQAHDDAIWSVAWGKNKKNGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVD 71

Query: 70  AHPSGYIAASASLDSFVRIFEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVAGGGSASI 129
              +G IAAS+SLD+ +R++++++   I +++A P + W + F+P+   LA  G     +
Sbjct: 72  ISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQFLA-TGSHVGKV 131

Query: 130 KIWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDGTISVFDV 189
            I+   T             G K        KF+LS+A+S DG+ LA G++DG I++FD+
Sbjct: 132 NIFGVET-------------GKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 191

Query: 190 ARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMSGHSSWVL 249
           A  K LH LEGH MP+RSL +SP + +LL +ASDD ++ +YD +   L G +SGH SWVL
Sbjct: 192 ATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVL 251

Query: 250 SVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGAGVRSGRLAS 309
           +V   PD     + SSD++V++WD   RT V T  +H DQVWGV +   G+     ++ S
Sbjct: 252 NVAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVWGVKYNGSGS-----KIVS 302

Query: 310 VSDDKSISLYD 319
           V DD+ I +YD
Sbjct: 312 VGDDQEIHIYD 302

[Close]

BLAST of Cp4.1LG18g03420 vs. NCBI nr
Match: XP_022987787.1 (WD repeat-containing protein VIP3 [Cucurbita maxima] >XP_023515877.1 WD repeat-containing protein VIP3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 645 bits (1665), Expect = 1.05e-233
Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 0


Query: 1   MKLAGLKSVENAHEESVWAATWIPATDNRPSLLVTGSLDETVKLWKSDELDLDRTNTGHC 60
           MKLAGLKSVENAHEESVWAATWIPATDNRPSLLVTGSLDETVKLWKSDELDLDRTNTGHC
Sbjct: 1   MKLAGLKSVENAHEESVWAATWIPATDNRPSLLVTGSLDETVKLWKSDELDLDRTNTGHC 60

Query: 61  LGVVSVAAHPSGYIAASASLDSFVRIFEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVA 120
           LGVVSVAAHPSGYIAASASLDSFVRIFEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVA
Sbjct: 61  LGVVSVAAHPSGYIAASASLDSFVRIFEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVA 120

Query: 121 GGGSASIKIWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDG 180
           GGGSASIKIWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDG
Sbjct: 121 GGGSASIKIWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDG 180

Query: 181 TISVFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS 240
           TISVFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS
Sbjct: 181 TISVFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS 240

Query: 241 GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGAGV 300
           GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGAGV
Sbjct: 241 GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGAGV 300

Query: 301 RSGRLASVSDDKSISLYDYS 320
           RSGRLASVSDDKSISLYDYS
Sbjct: 301 RSGRLASVSDDKSISLYDYS 320

[Close]

BLAST of Cp4.1LG18g03420 vs. NCBI nr
Match: XP_022960889.1 (WD repeat-containing protein VIP3 [Cucurbita moschata] >KAG7023680.1 WD repeat-containing protein VIP3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 644 bits (1661), Expect = 4.29e-233
Identity = 319/320 (99.69%), Postives = 319/320 (99.69%), Query Frame = 0


Query: 1   MKLAGLKSVENAHEESVWAATWIPATDNRPSLLVTGSLDETVKLWKSDELDLDRTNTGHC 60
           MKLAGLKSVENAHEESVWAATWIPATDNRPSLLVTGSLDETVKLWKSDELDLDRTNTGHC
Sbjct: 1   MKLAGLKSVENAHEESVWAATWIPATDNRPSLLVTGSLDETVKLWKSDELDLDRTNTGHC 60

Query: 61  LGVVSVAAHPSGYIAASASLDSFVRIFEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVA 120
           LGVVSVAAHPSGYIAASASLDSFVRIFEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVA
Sbjct: 61  LGVVSVAAHPSGYIAASASLDSFVRIFEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVA 120

Query: 121 GGGSASIKIWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDG 180
           GGGSASIKIWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDG
Sbjct: 121 GGGSASIKIWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDG 180

Query: 181 TISVFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS 240
           TISVFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYD EGKTLIGAMS
Sbjct: 181 TISVFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDVEGKTLIGAMS 240

Query: 241 GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGAGV 300
           GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGAGV
Sbjct: 241 GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGAGV 300

Query: 301 RSGRLASVSDDKSISLYDYS 320
           RSGRLASVSDDKSISLYDYS
Sbjct: 301 RSGRLASVSDDKSISLYDYS 320

[Close]

BLAST of Cp4.1LG18g03420 vs. NCBI nr
Match: XP_038878969.1 (WD repeat-containing protein VIP3 [Benincasa hispida])

HSP 1 Score: 631 bits (1627), Expect = 6.79e-228
Identity = 310/321 (96.57%), Postives = 319/321 (99.38%), Query Frame = 0


Query: 1   MKLAGLKSVENAHEESVWAATWIPATDNRPSLLVTGSLDETVKLWKSDELDLDRTNTGHC 60
           MKLAGLKSVENAHEESVWAATW+PATDNRPSLL+TGSLDETVKLWKSDELDL+RTNTGHC
Sbjct: 1   MKLAGLKSVENAHEESVWAATWVPATDNRPSLLLTGSLDETVKLWKSDELDLERTNTGHC 60

Query: 61  LGVVSVAAHPSGYIAASASLDSFVRIFEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVA 120
           LGVVSVAAHPSG+IAASASLDSFVR+FEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVA
Sbjct: 61  LGVVSVAAHPSGFIAASASLDSFVRVFEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVA 120

Query: 121 GGGSASIKIWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDG 180
           GGGSASIK+WDT+TWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWS+DGRRLACGSMDG
Sbjct: 121 GGGSASIKLWDTNTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSIDGRRLACGSMDG 180

Query: 181 TISVFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS 240
           TISVFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS
Sbjct: 181 TISVFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS 240

Query: 241 GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPG-AG 300
           GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGV FRPPG AG
Sbjct: 241 GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVTFRPPGGAG 300

Query: 301 VRSGRLASVSDDKSISLYDYS 320
           +RSGRLASVSDDKSISLYDYS
Sbjct: 301 MRSGRLASVSDDKSISLYDYS 321

[Close]

BLAST of Cp4.1LG18g03420 vs. NCBI nr
Match: XP_008450896.1 (PREDICTED: WD repeat-containing protein VIP3 [Cucumis melo] >KAA0055801.1 WD repeat-containing protein VIP3 [Cucumis melo var. makuwa] >TYK10052.1 WD repeat-containing protein VIP3 [Cucumis melo var. makuwa])

HSP 1 Score: 630 bits (1625), Expect = 1.37e-227
Identity = 309/321 (96.26%), Postives = 318/321 (99.07%), Query Frame = 0


Query: 1   MKLAGLKSVENAHEESVWAATWIPATDNRPSLLVTGSLDETVKLWKSDELDLDRTNTGHC 60
           MKLAGLKSVENAHEESVWA TW+PATDNRPSLL+TGSLDETVKLWKSDELDL+RTNTGHC
Sbjct: 1   MKLAGLKSVENAHEESVWAVTWVPATDNRPSLLLTGSLDETVKLWKSDELDLERTNTGHC 60

Query: 61  LGVVSVAAHPSGYIAASASLDSFVRIFEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVA 120
           LGVVSVAAHPSG+IAASASLDSFVR+FEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVA
Sbjct: 61  LGVVSVAAHPSGFIAASASLDSFVRVFEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVA 120

Query: 121 GGGSASIKIWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDG 180
           GGGSASIK+WDT+TWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWS+DGRRLACGSMDG
Sbjct: 121 GGGSASIKLWDTNTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSIDGRRLACGSMDG 180

Query: 181 TISVFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS 240
           TIS+FDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS
Sbjct: 181 TISIFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS 240

Query: 241 GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGA-G 300
           GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPG  G
Sbjct: 241 GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGGVG 300

Query: 301 VRSGRLASVSDDKSISLYDYS 320
           VRSGRLASVSDDKSISLYDYS
Sbjct: 301 VRSGRLASVSDDKSISLYDYS 321

[Close]

BLAST of Cp4.1LG18g03420 vs. NCBI nr
Match: XP_004144016.1 (WD repeat-containing protein VIP3 [Cucumis sativus])

HSP 1 Score: 630 bits (1624), Expect = 1.95e-227
Identity = 310/321 (96.57%), Postives = 318/321 (99.07%), Query Frame = 0


Query: 1   MKLAGLKSVENAHEESVWAATWIPATDNRPSLLVTGSLDETVKLWKSDELDLDRTNTGHC 60
           MKLAGLKSVENAHEESVWAATW+PATD RPSLL+TGSLDETVKLWKSDELDL+RTNTGHC
Sbjct: 1   MKLAGLKSVENAHEESVWAATWVPATDTRPSLLLTGSLDETVKLWKSDELDLERTNTGHC 60

Query: 61  LGVVSVAAHPSGYIAASASLDSFVRIFEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVA 120
           LGVVSVAAHPSG+IAASASLDSFVR+FEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVA
Sbjct: 61  LGVVSVAAHPSGFIAASASLDSFVRVFEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVA 120

Query: 121 GGGSASIKIWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDG 180
           GGGSASIK+WDT+TWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWS+DGRRLACGSMDG
Sbjct: 121 GGGSASIKLWDTNTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSIDGRRLACGSMDG 180

Query: 181 TISVFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS 240
           TISVFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS
Sbjct: 181 TISVFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS 240

Query: 241 GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGA-G 300
           GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPG  G
Sbjct: 241 GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGGVG 300

Query: 301 VRSGRLASVSDDKSISLYDYS 320
           VRSGRLASVSDDKSISLYDYS
Sbjct: 301 VRSGRLASVSDDKSISLYDYS 321

[Close]

BLAST of Cp4.1LG18g03420 vs. ExPASy TrEMBL
Match: A0A6J1JBB4 (WD repeat-containing protein VIP3 OS=Cucurbita maxima OX=3661 GN=LOC111485231 PE=4 SV=1)

HSP 1 Score: 645 bits (1665), Expect = 5.10e-234
Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 0


Query: 1   MKLAGLKSVENAHEESVWAATWIPATDNRPSLLVTGSLDETVKLWKSDELDLDRTNTGHC 60
           MKLAGLKSVENAHEESVWAATWIPATDNRPSLLVTGSLDETVKLWKSDELDLDRTNTGHC
Sbjct: 1   MKLAGLKSVENAHEESVWAATWIPATDNRPSLLVTGSLDETVKLWKSDELDLDRTNTGHC 60

Query: 61  LGVVSVAAHPSGYIAASASLDSFVRIFEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVA 120
           LGVVSVAAHPSGYIAASASLDSFVRIFEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVA
Sbjct: 61  LGVVSVAAHPSGYIAASASLDSFVRIFEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVA 120

Query: 121 GGGSASIKIWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDG 180
           GGGSASIKIWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDG
Sbjct: 121 GGGSASIKIWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDG 180

Query: 181 TISVFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS 240
           TISVFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS
Sbjct: 181 TISVFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS 240

Query: 241 GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGAGV 300
           GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGAGV
Sbjct: 241 GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGAGV 300

Query: 301 RSGRLASVSDDKSISLYDYS 320
           RSGRLASVSDDKSISLYDYS
Sbjct: 301 RSGRLASVSDDKSISLYDYS 320

[Close]

BLAST of Cp4.1LG18g03420 vs. ExPASy TrEMBL
Match: A0A6J1HCE5 (WD repeat-containing protein VIP3 OS=Cucurbita moschata OX=3662 GN=LOC111461552 PE=4 SV=1)

HSP 1 Score: 644 bits (1661), Expect = 2.08e-233
Identity = 319/320 (99.69%), Postives = 319/320 (99.69%), Query Frame = 0


Query: 1   MKLAGLKSVENAHEESVWAATWIPATDNRPSLLVTGSLDETVKLWKSDELDLDRTNTGHC 60
           MKLAGLKSVENAHEESVWAATWIPATDNRPSLLVTGSLDETVKLWKSDELDLDRTNTGHC
Sbjct: 1   MKLAGLKSVENAHEESVWAATWIPATDNRPSLLVTGSLDETVKLWKSDELDLDRTNTGHC 60

Query: 61  LGVVSVAAHPSGYIAASASLDSFVRIFEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVA 120
           LGVVSVAAHPSGYIAASASLDSFVRIFEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVA
Sbjct: 61  LGVVSVAAHPSGYIAASASLDSFVRIFEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVA 120

Query: 121 GGGSASIKIWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDG 180
           GGGSASIKIWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDG
Sbjct: 121 GGGSASIKIWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDG 180

Query: 181 TISVFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS 240
           TISVFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYD EGKTLIGAMS
Sbjct: 181 TISVFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDVEGKTLIGAMS 240

Query: 241 GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGAGV 300
           GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGAGV
Sbjct: 241 GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGAGV 300

Query: 301 RSGRLASVSDDKSISLYDYS 320
           RSGRLASVSDDKSISLYDYS
Sbjct: 301 RSGRLASVSDDKSISLYDYS 320

[Close]

BLAST of Cp4.1LG18g03420 vs. ExPASy TrEMBL
Match: A0A5D3CFF6 (WD repeat-containing protein VIP3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G001850 PE=4 SV=1)

HSP 1 Score: 630 bits (1625), Expect = 6.63e-228
Identity = 309/321 (96.26%), Postives = 318/321 (99.07%), Query Frame = 0


Query: 1   MKLAGLKSVENAHEESVWAATWIPATDNRPSLLVTGSLDETVKLWKSDELDLDRTNTGHC 60
           MKLAGLKSVENAHEESVWA TW+PATDNRPSLL+TGSLDETVKLWKSDELDL+RTNTGHC
Sbjct: 1   MKLAGLKSVENAHEESVWAVTWVPATDNRPSLLLTGSLDETVKLWKSDELDLERTNTGHC 60

Query: 61  LGVVSVAAHPSGYIAASASLDSFVRIFEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVA 120
           LGVVSVAAHPSG+IAASASLDSFVR+FEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVA
Sbjct: 61  LGVVSVAAHPSGFIAASASLDSFVRVFEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVA 120

Query: 121 GGGSASIKIWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDG 180
           GGGSASIK+WDT+TWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWS+DGRRLACGSMDG
Sbjct: 121 GGGSASIKLWDTNTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSIDGRRLACGSMDG 180

Query: 181 TISVFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS 240
           TIS+FDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS
Sbjct: 181 TISIFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS 240

Query: 241 GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGA-G 300
           GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPG  G
Sbjct: 241 GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGGVG 300

Query: 301 VRSGRLASVSDDKSISLYDYS 320
           VRSGRLASVSDDKSISLYDYS
Sbjct: 301 VRSGRLASVSDDKSISLYDYS 321

[Close]

BLAST of Cp4.1LG18g03420 vs. ExPASy TrEMBL
Match: A0A1S3BQZ8 (WD repeat-containing protein VIP3 OS=Cucumis melo OX=3656 GN=LOC103492347 PE=4 SV=1)

HSP 1 Score: 630 bits (1625), Expect = 6.63e-228
Identity = 309/321 (96.26%), Postives = 318/321 (99.07%), Query Frame = 0


Query: 1   MKLAGLKSVENAHEESVWAATWIPATDNRPSLLVTGSLDETVKLWKSDELDLDRTNTGHC 60
           MKLAGLKSVENAHEESVWA TW+PATDNRPSLL+TGSLDETVKLWKSDELDL+RTNTGHC
Sbjct: 1   MKLAGLKSVENAHEESVWAVTWVPATDNRPSLLLTGSLDETVKLWKSDELDLERTNTGHC 60

Query: 61  LGVVSVAAHPSGYIAASASLDSFVRIFEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVA 120
           LGVVSVAAHPSG+IAASASLDSFVR+FEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVA
Sbjct: 61  LGVVSVAAHPSGFIAASASLDSFVRVFEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVA 120

Query: 121 GGGSASIKIWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDG 180
           GGGSASIK+WDT+TWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWS+DGRRLACGSMDG
Sbjct: 121 GGGSASIKLWDTNTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSIDGRRLACGSMDG 180

Query: 181 TISVFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS 240
           TIS+FDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS
Sbjct: 181 TISIFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS 240

Query: 241 GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGA-G 300
           GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPG  G
Sbjct: 241 GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGGVG 300

Query: 301 VRSGRLASVSDDKSISLYDYS 320
           VRSGRLASVSDDKSISLYDYS
Sbjct: 301 VRSGRLASVSDDKSISLYDYS 321

[Close]

BLAST of Cp4.1LG18g03420 vs. ExPASy TrEMBL
Match: A0A0A0LWK2 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G590260 PE=4 SV=1)

HSP 1 Score: 630 bits (1624), Expect = 9.42e-228
Identity = 310/321 (96.57%), Postives = 318/321 (99.07%), Query Frame = 0


Query: 1   MKLAGLKSVENAHEESVWAATWIPATDNRPSLLVTGSLDETVKLWKSDELDLDRTNTGHC 60
           MKLAGLKSVENAHEESVWAATW+PATD RPSLL+TGSLDETVKLWKSDELDL+RTNTGHC
Sbjct: 1   MKLAGLKSVENAHEESVWAATWVPATDTRPSLLLTGSLDETVKLWKSDELDLERTNTGHC 60

Query: 61  LGVVSVAAHPSGYIAASASLDSFVRIFEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVA 120
           LGVVSVAAHPSG+IAASASLDSFVR+FEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVA
Sbjct: 61  LGVVSVAAHPSGFIAASASLDSFVRVFEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVA 120

Query: 121 GGGSASIKIWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDG 180
           GGGSASIK+WDT+TWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWS+DGRRLACGSMDG
Sbjct: 121 GGGSASIKLWDTNTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSIDGRRLACGSMDG 180

Query: 181 TISVFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS 240
           TISVFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS
Sbjct: 181 TISVFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS 240

Query: 241 GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGA-G 300
           GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPG  G
Sbjct: 241 GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGGVG 300

Query: 301 VRSGRLASVSDDKSISLYDYS 320
           VRSGRLASVSDDKSISLYDYS
Sbjct: 301 VRSGRLASVSDDKSISLYDYS 321

[Close]

BLAST of Cp4.1LG18g03420 vs. TAIR 10
Match: AT4G29830.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 535.0 bits (1377), Expect = 4.0e-152
Identity = 251/321 (78.19%), Postives = 296/321 (92.21%), Query Frame = 0


Query: 1   MKLAGLKSVENAHEESVWAATWIPATDNRPSLLVTGSLDETVKLWKSDELDLDRTNTGHC 60
           MKLAGLKS+ENAHE+SVWAATW+PAT++RP+LL+TGSLDETVKLW+ DELDL RTNTGH 
Sbjct: 1   MKLAGLKSIENAHEDSVWAATWVPATEDRPALLLTGSLDETVKLWRPDELDLVRTNTGHS 60

Query: 61  LGVVSVAAHPSGYIAASASLDSFVRIFEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVA 120
           LGV ++AAHPSG IAAS+S+DSFVR+F+VD+N+TIA LEAPPSEVW M+F P+GT+LAVA
Sbjct: 61  LGVAALAAHPSGIIAASSSIDSFVRVFDVDTNATIAVLEAPPSEVWGMQFEPKGTILAVA 120

Query: 121 GGGSASIKIWDTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDG 180
           GG SAS+K+WDT++W+L +TLSIPRP+ PKP+DKT+SKKFVLSVAWS +G+RLACGSMDG
Sbjct: 121 GGSSASVKLWDTASWRLISTLSIPRPDAPKPSDKTSSKKFVLSVAWSPNGKRLACGSMDG 180

Query: 181 TISVFDVARAKFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMS 240
           TI VFDV R+K LH LEGH MPVRSLV+SPV+PR+LFS SDD HV+M+DAEGKTL+G+MS
Sbjct: 181 TICVFDVDRSKLLHQLEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHDAEGKTLLGSMS 240

Query: 241 GHSSWVLSVDASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPP-GAG 300
           GH+SWVLSVDASPDG A+ATGSSDRTVRLWDL MR A+QTM+NH+DQVW VAFRPP G G
Sbjct: 241 GHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSVAFRPPGGTG 300

Query: 301 VRSGRLASVSDDKSISLYDYS 321
           VR+GRLASVSDDKS+SLYDYS
Sbjct: 301 VRAGRLASVSDDKSVSLYDYS 321

[Close]

BLAST of Cp4.1LG18g03420 vs. TAIR 10
Match: AT2G41500.1 (WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related )

HSP 1 Score: 113.2 bits (282), Expect = 3.8e-25
Identity = 76/258 (29.46%), Postives = 121/258 (46.90%), Query Frame = 0


Query: 13  HEESVWAATWIPATDNRPSLLVTGSLDETVKLWKSDELDLDRTNTGHCLGVVSVAAHPSG 72
           H+E      + P  D     L T S D T KLWK+D   L +T  GH   +  VA HPSG
Sbjct: 297 HKERATDVVFSPVDD----CLATASADRTAKLWKTDG-TLLQTFEGHLDRLARVAFHPSG 356

Query: 73  YIAASASLDSFVRIFEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVAGGGSASIKIWDT 132
               + S D   R++++++ + +   E     V+ + F  +G + A  G  S + ++WD 
Sbjct: 357 KYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLA-RVWDL 416

Query: 133 STWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDGTISVFDVARAKF 192
            T +                      K V SV +S +G  LA G  D    ++D+   K 
Sbjct: 417 RTGRSILVFQ-------------GHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKS 476

Query: 193 LHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMSGHSSWVLSVDAS 252
           L+ +  H   V  + Y P E   L +AS D  V+++     +L+ +++GH S V S+D +
Sbjct: 477 LYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDIT 535

Query: 253 PDGAAVATGSSDRTVRLW 271
            D + +AT S DRT++LW
Sbjct: 537 ADSSCIATVSHDRTIKLW 535

[Close]

BLAST of Cp4.1LG18g03420 vs. TAIR 10
Match: AT3G49660.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 107.8 bits (268), Expect = 1.6e-23
Identity = 71/240 (29.58%), Postives = 118/240 (49.17%), Query Frame = 0


Query: 33  LVTGSLDETVKLWKSDELDLDRTNTGHCLGVVSVAAHPSGYIAASASLDSFVRIFEVDSN 92
           +V+ S D+T+KLW  +   L +T  GH      V  +P   +  S S D  VRI++V + 
Sbjct: 86  IVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTG 145

Query: 93  STIATLEAPPSEVWQMRFNPEGTMLAVAGGGSASIKIWDTSTWKLAATLSIPRPEGPKPT 152
             +  L A    V  + FN +G+++ V+       +IWD+ T     TL     E P   
Sbjct: 146 KCLKVLPAHSDPVTAVDFNRDGSLI-VSSSYDGLCRIWDSGTGHCVKTLI--DDENPP-- 205

Query: 153 DKTASKKFVLSVAWSVDGRRLACGSMDGTISVFDVARAKFLHHLEGHF--MPVRSLVYSP 212
                   V  V +S +G+ +  G++D T+ +++++ AKFL    GH       S  +S 
Sbjct: 206 --------VSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSV 265

Query: 213 VEPRLLFSASDDAHVHMYDAEGKTLIGAMSGHSSWVLSVDASPDGAAVATGSSDRTVRLW 271
              + + S S+D  VHM++   K L+  + GH+  V++V   P    +A+GS D+TVR+W
Sbjct: 266 TNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312

[Close]

BLAST of Cp4.1LG18g03420 vs. TAIR 10
Match: AT5G67320.1 (WD-40 repeat family protein )

HSP 1 Score: 94.7 bits (234), Expect = 1.4e-19
Identity = 90/360 (25.00%), Postives = 152/360 (42.22%), Query Frame = 0


Query: 13  HEESVWAATWIPATDNRPSLLVTGSLDETVKLWKSDELDLDRTNTG---------HCLG- 72
           H   V A  W P+     SLL +GS D T ++W   E      +TG         H  G 
Sbjct: 264 HTSEVCACAWSPSA----SLLASGSGDATARIWSIPEGSFKAVHTGRNINALILKHAKGK 323

Query: 73  -------VVSVAAHPSGYIAASASLDSFVRIFEVDSNSTIATLEAPPSEVWQMRFNPEGT 132
                  V ++  +  G + A+ S D   RI+ + +   I+TL      ++ +++N +G 
Sbjct: 324 SNEKSKDVTTLDWNGEGTLLATGSCDGQARIWTL-NGELISTLSKHKGPIFSLKWNKKGD 383

Query: 133 MLAVAGGGSASIKIWDTST--WK------LAATLSIP-RPEGPKPTDKTAS--------- 192
            L + G    +  +WD     WK         TL +  R      T  T S         
Sbjct: 384 YL-LTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDSMIYLCKIGE 443

Query: 193 ----KKF------VLSVAWSVDGRRLACGSMDGTISVFDVARAKFLHHLEGHFMPVRSLV 252
               K F      V  V W   G  LA  S D T  ++++ ++ F+H L  H   + ++ 
Sbjct: 444 TRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIR 503

Query: 253 YSPVEP--------RLLFSASDDAHVHMYDAEGKTLIGAMSGHSSWVLSVDASPDGAAVA 312
           +SP  P          L SAS D+ V ++DAE   ++ + +GH   V S+  SP+G  +A
Sbjct: 504 WSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIA 563

Query: 313 TGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGAGVRSGRLASVSDDKSISLYDY 320
           +GS D+++ +W +     V+T T +   ++ V +   G      ++A+   D S+ + D+
Sbjct: 564 SGSLDKSIHIWSIKEGKIVKTYTGNGG-IFEVCWNKEG-----NKIAACFADNSVCVLDF 611

[Close]

BLAST of Cp4.1LG18g03420 vs. TAIR 10
Match: AT5G23430.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 85.5 bits (210), Expect = 8.5e-17
Identity = 60/233 (25.75%), Postives = 104/233 (44.64%), Query Frame = 0


Query: 71  SGYIAASASLDSFVRIFEVDSNSTIATLEAPPSEVWQMRFNPEGTMLAVAGGGSASIKIW 130
           S  +  +   D  V ++ +   + I +L    S +  + F+    ++A AG  S +IK+W
Sbjct: 28  SSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVA-AGAASGTIKLW 87

Query: 131 DTSTWKLAATLSIPRPEGPKPTDKTASKKFVLSVAWSVDGRRLACGSMDGTISVFDVARA 190
           D    K+  TL             T  +   +SV +   G   A GS+D  + ++D+ + 
Sbjct: 88  DLEEAKIVRTL-------------TGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKK 147

Query: 191 KFLHHLEGHFMPVRSLVYSPVEPRLLFSASDDAHVHMYDAEGKTLIGAMSGHSSWVLSVD 250
             +H  +GH   V  L ++P + R + S  +D  V ++D     L+     H   + S+D
Sbjct: 148 GCIHTYKGHTRGVNVLRFTP-DGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLD 207

Query: 251 ASPDGAAVATGSSDRTVRLWDLNMRTAVQTMTNHSDQVWGVAFRPPGAGVRSG 304
             P    +ATGS+DRTV+ WDL     + +    +  V  ++F P G  V  G
Sbjct: 208 FHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCG 245

The following BLAST results are available for this feature:

BLAST of Cp4.1LG18g03420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZQ5	5.7e-151	78.19	WD repeat-containing protein VIP3 OS=Arabidopsis thaliana OX=3702 GN=VIP3 PE=1 S...	[more]
Q6PBD6	8.1e-65	41.16	WD repeat-containing protein 61 OS=Xenopus tropicalis OX=8364 GN=wdr61 PE=2 SV=1	[more]
Q6P5M2	6.9e-64	40.51	WD repeat-containing protein 61 OS=Danio rerio OX=7955 GN=wdr61 PE=2 SV=1	[more]
Q6GMD2	9.0e-64	40.84	WD repeat-containing protein 61 OS=Xenopus laevis OX=8355 GN=wdr61 PE=2 SV=1	[more]
Q5ZJH5	2.0e-63	39.87	WD repeat-containing protein 61 OS=Gallus gallus OX=9031 GN=WDR61 PE=2 SV=1	[more]

BLAST of Cp4.1LG18g03420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022987787.1	1.05e-233	100.00	WD repeat-containing protein VIP3 [Cucurbita maxima] >XP_023515877.1 WD repeat-c...	[more]
XP_022960889.1	4.29e-233	99.69	WD repeat-containing protein VIP3 [Cucurbita moschata] >KAG7023680.1 WD repeat-c...	[more]
XP_038878969.1	6.79e-228	96.57	WD repeat-containing protein VIP3 [Benincasa hispida]	[more]
XP_008450896.1	1.37e-227	96.26	PREDICTED: WD repeat-containing protein VIP3 [Cucumis melo] >KAA0055801.1 WD rep...	[more]
XP_004144016.1	1.95e-227	96.57	WD repeat-containing protein VIP3 [Cucumis sativus]	[more]

BLAST of Cp4.1LG18g03420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JBB4	5.10e-234	100.00	WD repeat-containing protein VIP3 OS=Cucurbita maxima OX=3661 GN=LOC111485231 PE...	[more]
A0A6J1HCE5	2.08e-233	99.69	WD repeat-containing protein VIP3 OS=Cucurbita moschata OX=3662 GN=LOC111461552 ...	[more]
A0A5D3CFF6	6.63e-228	96.26	WD repeat-containing protein VIP3 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3BQZ8	6.63e-228	96.26	WD repeat-containing protein VIP3 OS=Cucumis melo OX=3656 GN=LOC103492347 PE=4 S...	[more]
A0A0A0LWK2	9.42e-228	96.57	WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G...	[more]

BLAST of Cp4.1LG18g03420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29830.1	4.0e-152	78.19	Transducin/WD40 repeat-like superfamily protein	[more]
AT2G41500.1	3.8e-25	29.46	WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related	[more]
AT3G49660.1	1.6e-23	29.58	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G67320.1	1.4e-19	25.00	WD-40 repeat family protein	[more]
AT5G23430.1	8.5e-17	25.75	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 173..187 score: 34.35 coord: 33..47 score: 37.0 coord: 258..272 score: 40.05
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 189..229 e-value: 4.0E-5 score: 33.0 coord: 232..271 e-value: 2.7E-9 score: 46.9 coord: 134..186 e-value: 2.0E-4 score: 30.7 coord: 91..131 e-value: 9.1E-5 score: 31.8 coord: 2..46 e-value: 0.035 score: 23.3 coord: 49..88 e-value: 0.0044 score: 26.2 coord: 274..318 e-value: 0.0093 score: 25.2
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 95..131 e-value: 0.044 score: 14.7 coord: 54..87 e-value: 0.21 score: 12.5 coord: 278..318 e-value: 0.13 score: 13.2 coord: 237..271 e-value: 7.7E-8 score: 32.9
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 239..280 score: 17.392599
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 10..55 score: 9.806668
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 56..97 score: 9.906923
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 281..320 score: 8.804123
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 154..195 score: 8.971213
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 196..238 score: 8.770704
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 98..140 score: 8.536777
IPR024977	Anaphase-promoting complex subunit 4, WD40 domain	PFAM	PF12894	ANAPC4_WD40	coord: 155..197 e-value: 2.4E-5 score: 24.5
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 5..320 e-value: 1.0E-86 score: 292.5
None	No IPR available	PANTHER	PTHR44090	WD REPEAT-CONTAINING PROTEIN 61	coord: 1..320
None	No IPR available	PANTHER	PTHR44090:SF3	WD REPEAT-CONTAINING PROTEIN VIP3-LIKE	coord: 1..320
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 281..320 score: 8.808332
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 239..273 score: 13.501034
None	No IPR available	CDD	cd00200	WD40	coord: 6..318 e-value: 4.59669E-62 score: 197.172
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 258..272
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 10..319

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG18g03420.1	Cp4.1LG18g03420.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051568	histone H3-K4 methylation
cellular_component	GO:0016593	Cdc73/Paf1 complex
molecular_function	GO:0005515	protein binding