Cp4.1LG18g03150 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG18g03150
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Gibberellin regulated protein
Location	Cp4.1LG18: 4627855 .. 4628789 (-)
RNA-Seq Expression	Cp4.1LG18g03150
Synteny	Cp4.1LG18g03150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCTCTCTCTCCTTCTCCCTCTCCTTCCCTCTCTCCCTCTCCCTCTTTAGTGTAGCCAGTTATAGCAGTTTGGCATGGCCAGGAAGCAAATAATGGAGATGTTTTTTGCAGTTATGTTTCTCAATTGCCTTTTGTTAGCACAAAATCATGTAAGTTTCTCCCGACCAACATTTTTTAGTTAACGTTTATTTACGCCTTGTTCGCCCAAACCCATGATGTTCTACGATGATATGATATGATCCACTTTGAACATAAGTTTTCGTGGCTCACAATGATACTATTTCTTACTTATAAACTCATTATCAACCCCTTAATTAGTCGATTTTGGTGGGTGTGTTTAGAGCATCAGCGAGGCTCCAACTCCACAGCCCCAGAGCGGCGGCGGCAACTCTCCCGATCCCATGGTACCATCAAAATTTATTATCATTTTATAAGAATATCCAATTTGGAAGCTAATGTATGCAATGTTGGGTGCCTAAATTCAGCATGGAGTGACTGAAGGCAGCCTGGAACCTGAAGGTAAAAGCAATTTGGCTTAGTTAAAAAAAATATGGGTTTAGAAAGAAAGGAAAAAGGGTAACAAAATATGGGTGCAGAGTGTGGGGGTCGATGCGCGGGGAGATGCTCAAAGACGGCGTTCAAGAAGCCATGCATGTTCTTCTGCCAGAAATGCTGTGCCAAATGCTTGTGTGTGCCGTATGGGACTTATGGAAACAAGCAGTCTTGTCCATGCTACAATGAATGGAAGACTAAAAGAGGAGGCCCCAAATGCCCTTGAATAATTAAACTACCATTATACTATTACTGTCTCTAAATTACATTTTATAATTTACCTCTTATCAATCTTTACCTCCTCCTACTTATAACCTATTTCTTACTTAGCACTCTAATTAATTACTTCTTCGAACAATAAACTCCATTAAAGGAGACCTATC

mRNA sequence

GTCTCTCTCTCCTTCTCCCTCTCCTTCCCTCTCTCCCTCTCCCTCTTTAGTGTAGCCAGTTATAGCAGTTTGGCATGGCCAGGAAGCAAATAATGGAGATGTTTTTTGCAGTTATGTTTCTCAATTGCCTTTTGTTAGCACAAAATCATAGCATCAGCGAGGCTCCAACTCCACAGCCCCAGAGCGGCGGCGGCAACTCTCCCGATCCCATGCATGGAGTGACTGAAGGCAGCCTGGAACCTGAAGAGTGTGGGGGTCGATGCGCGGGGAGATGCTCAAAGACGGCGTTCAAGAAGCCATGCATGTTCTTCTGCCAGAAATGCTGTGCCAAATGCTTGTGTGTGCCGTATGGGACTTATGGAAACAAGCAGTCTTGTCCATGCTACAATGAATGGAAGACTAAAAGAGGAGGCCCCAAATGCCCTTGAATAATTAAACTACCATTATACTATTACTGTCTCTAAATTACATTTTATAATTTACCTCTTATCAATCTTTACCTCCTCCTACTTATAACCTATTTCTTACTTAGCACTCTAATTAATTACTTCTTCGAACAATAAACTCCATTAAAGGAGACCTATC

Coding sequence (CDS)

ATGGCCAGGAAGCAAATAATGGAGATGTTTTTTGCAGTTATGTTTCTCAATTGCCTTTTGTTAGCACAAAATCATAGCATCAGCGAGGCTCCAACTCCACAGCCCCAGAGCGGCGGCGGCAACTCTCCCGATCCCATGCATGGAGTGACTGAAGGCAGCCTGGAACCTGAAGAGTGTGGGGGTCGATGCGCGGGGAGATGCTCAAAGACGGCGTTCAAGAAGCCATGCATGTTCTTCTGCCAGAAATGCTGTGCCAAATGCTTGTGTGTGCCGTATGGGACTTATGGAAACAAGCAGTCTTGTCCATGCTACAATGAATGGAAGACTAAAAGAGGAGGCCCCAAATGCCCTTGA

Protein sequence

MARKQIMEMFFAVMFLNCLLLAQNHSISEAPTPQPQSGGGNSPDPMHGVTEGSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP

Homology

[Close]

BLAST of Cp4.1LG18g03150 vs. ExPASy Swiss-Prot
Match: P27057 (Protein GAST1 OS=Solanum lycopersicum OX=4081 GN=GAST1 PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 2.5e-32
Identity = 60/105 (57.14%), Postives = 77/105 (73.33%), Query Frame = 0


Query: 13  VMFLNCLLLAQNHSISEAPTPQPQSGGGNSPDPMHGVTEGSLEPEECGGRCAGRCSKTAF 72
           V+F+  ++    + +S A   + +       + ++GV+EG L P++C  +C  RCSKT++
Sbjct: 8   VLFVLLVVFLTQNQVSRANIMRDEQQQQQRNNQLYGVSEGRLHPQDCQPKCTYRCSKTSY 67

Query: 73  KKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP 118
           KKPCMFFCQKCCAKCLCVP GTYGNKQSCPCYN WKTKRGGPKCP
Sbjct: 68  KKPCMFFCQKCCAKCLCVPAGTYGNKQSCPCYNNWKTKRGGPKCP 112

[Close]

BLAST of Cp4.1LG18g03150 vs. ExPASy Swiss-Prot
Match: Q6NMQ7 (Gibberellin-regulated protein 6 OS=Arabidopsis thaliana OX=3702 GN=GASA6 PE=3 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.9e-27
Identity = 50/66 (75.76%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 52  GSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKR 111
           GSL+  +CGG+C  RCS T + KPCMFFCQKCCAKCLCVP GTYGNKQ CPCYN WKT++
Sbjct: 36  GSLKSYQCGGQCTRRCSNTKYHKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQ 95

Query: 112 GGPKCP 118
           GGPKCP
Sbjct: 96  GGPKCP 101

[Close]

BLAST of Cp4.1LG18g03150 vs. ExPASy Swiss-Prot
Match: A8MR46 (Gibberellin-regulated protein 13 OS=Arabidopsis thaliana OX=3702 GN=GASA13 PE=3 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.8e-25
Identity = 47/60 (78.33%), Postives = 49/60 (81.67%), Query Frame = 0


Query: 58  ECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP 117
           ECG RC  RCS T +KKPC+FFC KCC KCLCVP GTYGNKQ CPCYN WKTK GGPKCP
Sbjct: 44  ECGPRCGDRCSNTQYKKPCLFFCNKCCNKCLCVPPGTYGNKQVCPCYNNWKTKSGGPKCP 103

[Close]

BLAST of Cp4.1LG18g03150 vs. ExPASy Swiss-Prot
Match: Q84J95 (Gibberellin-regulated protein 5 OS=Arabidopsis thaliana OX=3702 GN=GASA5 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.3e-25
Identity = 46/66 (69.70%), Postives = 54/66 (81.82%), Query Frame = 0


Query: 52  GSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKR 111
           G L+P++C  +C+ RCS T+ KKPCMFFC KCC KCLCVP GT+GNKQ+CPCYN WKTK 
Sbjct: 32  GKLKPQQCNSKCSFRCSATSHKKPCMFFCLKCCKKCLCVPPGTFGNKQTCPCYNNWKTKE 91

Query: 112 GGPKCP 118
           G PKCP
Sbjct: 92  GRPKCP 97

[Close]

BLAST of Cp4.1LG18g03150 vs. ExPASy Swiss-Prot
Match: Q6GKX7 (Gibberellin-regulated protein 12 OS=Arabidopsis thaliana OX=3702 GN=GASA12 PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 3.0e-25
Identity = 57/112 (50.89%), Postives = 66/112 (58.93%), Query Frame = 0


Query: 6   IMEMFFAVMFLNCLLLAQNHSISEAPTPQPQSGGGNSPDPMHGVTEGSLEPEECGGRCAG 65
           I  + FA  F N      +   S+A  P     GG          EGSL+PEEC   C  
Sbjct: 10  ISSLLFATQFSN-----GDELESQAQAPAIHKNGG----------EGSLKPEECPKACEY 69

Query: 66  RCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP 118
           RCS T+ +KPC+FFC KCC KCLCVP GTYG+K+ CPCYN W TK GGPKCP
Sbjct: 70  RCSATSHRKPCLFFCNKCCNKCLCVPSGTYGHKEECPCYNNWTTKEGGPKCP 106

[Close]

BLAST of Cp4.1LG18g03150 vs. NCBI nr
Match: XP_023516497.1 (protein GAST1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 256 bits (655), Expect = 1.87e-86
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MARKQIMEMFFAVMFLNCLLLAQNHSISEAPTPQPQSGGGNSPDPMHGVTEGSLEPEECG 60
           MARKQIMEMFFAVMFLNCLLLAQNHSISEAPTPQPQSGGGNSPDPMHGVTEGSLEPEECG
Sbjct: 1   MARKQIMEMFFAVMFLNCLLLAQNHSISEAPTPQPQSGGGNSPDPMHGVTEGSLEPEECG 60

Query: 61  GRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP 117
           GRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP
Sbjct: 61  GRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP 117

[Close]

BLAST of Cp4.1LG18g03150 vs. NCBI nr
Match: XP_022980754.1 (protein GAST1-like [Cucurbita maxima])

HSP 1 Score: 241 bits (614), Expect = 3.49e-80
Identity = 111/118 (94.07%), Postives = 112/118 (94.92%), Query Frame = 0


Query: 1   MARKQIMEMFFAVMFLNCLLLAQNHSISEAPTPQPQSGGG-NSPDPMHGVTEGSLEPEEC 60
           MARKQ+ EMFFAVM  NCLLLAQNHSISEAPTPQPQSGG  N PDPMHGVTEGSLEPEEC
Sbjct: 1   MARKQVTEMFFAVMLFNCLLLAQNHSISEAPTPQPQSGGSSNYPDPMHGVTEGSLEPEEC 60

Query: 61  GGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP 117
           GGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP
Sbjct: 61  GGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP 118

[Close]

BLAST of Cp4.1LG18g03150 vs. NCBI nr
Match: XP_022930592.1 (protein GAST1-like [Cucurbita moschata])

HSP 1 Score: 240 bits (613), Expect = 4.80e-80
Identity = 109/117 (93.16%), Postives = 112/117 (95.73%), Query Frame = 0


Query: 1   MARKQIMEMFFAVMFLNCLLLAQNHSISEAPTPQPQSGGGNSPDPMHGVTEGSLEPEECG 60
           MARKQI+E FFAV+ LNCLLLAQNHSISEAPTPQP SGGGN PDPM GV+EGSLEPEECG
Sbjct: 1   MARKQILETFFAVVLLNCLLLAQNHSISEAPTPQPHSGGGNYPDPMRGVSEGSLEPEECG 60

Query: 61  GRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP 117
           GRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP
Sbjct: 61  GRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP 117

[Close]

BLAST of Cp4.1LG18g03150 vs. NCBI nr
Match: KAG6581671.1 (Protein GAST1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 228 bits (582), Expect = 2.19e-75
Identity = 106/117 (90.60%), Postives = 109/117 (93.16%), Query Frame = 0


Query: 1   MARKQIMEMFFAVMFLNCLLLAQNHSISEAPTPQPQSGGGNSPDPMHGVTEGSLEPEECG 60
           MARKQI+EMFFAV+ LNCLLLAQNHSISEAPTPQP SG     DPM GV+EGSLEPEECG
Sbjct: 1   MARKQILEMFFAVVLLNCLLLAQNHSISEAPTPQPHSG-----DPMRGVSEGSLEPEECG 60

Query: 61  GRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP 117
           GRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP
Sbjct: 61  GRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP 112

[Close]

BLAST of Cp4.1LG18g03150 vs. NCBI nr
Match: XP_038903614.1 (protein GAST1 [Benincasa hispida])

HSP 1 Score: 214 bits (546), Expect = 2.21e-69
Identity = 96/117 (82.05%), Postives = 102/117 (87.18%), Query Frame = 0


Query: 1   MARKQIMEMFFAVMFLNCLLLAQNHSISEAPTPQPQSGGGNSPDPMHGVTEGSLEPEECG 60
           MARKQ+M M F VM LNC+LL  NH+ISEAPTPQPQS G  S  PMHGVTEGSL+P+ECG
Sbjct: 32  MARKQVMVMLFLVMLLNCVLLVHNHAISEAPTPQPQSSGNYSSSPMHGVTEGSLQPQECG 91

Query: 61  GRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP 117
            RC  RC KTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQ+CPCYNEWKTKRGGPKCP
Sbjct: 92  PRCTERCLKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNEWKTKRGGPKCP 148

[Close]

BLAST of Cp4.1LG18g03150 vs. ExPASy TrEMBL
Match: A0A6J1J049 (protein GAST1-like OS=Cucurbita maxima OX=3661 GN=LOC111480028 PE=3 SV=1)

HSP 1 Score: 241 bits (614), Expect = 1.69e-80
Identity = 111/118 (94.07%), Postives = 112/118 (94.92%), Query Frame = 0


Query: 1   MARKQIMEMFFAVMFLNCLLLAQNHSISEAPTPQPQSGGG-NSPDPMHGVTEGSLEPEEC 60
           MARKQ+ EMFFAVM  NCLLLAQNHSISEAPTPQPQSGG  N PDPMHGVTEGSLEPEEC
Sbjct: 1   MARKQVTEMFFAVMLFNCLLLAQNHSISEAPTPQPQSGGSSNYPDPMHGVTEGSLEPEEC 60

Query: 61  GGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP 117
           GGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP
Sbjct: 61  GGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP 118

[Close]

BLAST of Cp4.1LG18g03150 vs. ExPASy TrEMBL
Match: A0A6J1EQZ6 (protein GAST1-like OS=Cucurbita moschata OX=3662 GN=LOC111436994 PE=3 SV=1)

HSP 1 Score: 240 bits (613), Expect = 2.32e-80
Identity = 109/117 (93.16%), Postives = 112/117 (95.73%), Query Frame = 0


Query: 1   MARKQIMEMFFAVMFLNCLLLAQNHSISEAPTPQPQSGGGNSPDPMHGVTEGSLEPEECG 60
           MARKQI+E FFAV+ LNCLLLAQNHSISEAPTPQP SGGGN PDPM GV+EGSLEPEECG
Sbjct: 1   MARKQILETFFAVVLLNCLLLAQNHSISEAPTPQPHSGGGNYPDPMRGVSEGSLEPEECG 60

Query: 61  GRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP 117
           GRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP
Sbjct: 61  GRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP 117

[Close]

BLAST of Cp4.1LG18g03150 vs. ExPASy TrEMBL
Match: A0A6J1E399 (protein GAST1 OS=Momordica charantia OX=3673 GN=LOC111025644 PE=3 SV=1)

HSP 1 Score: 207 bits (527), Expect = 2.96e-67
Identity = 96/117 (82.05%), Postives = 103/117 (88.03%), Query Frame = 0


Query: 1   MARKQIMEMFFAVMFLNCLLLAQNHSISEAPTPQPQSGGGNSPDPMHGVTEGSLEPEECG 60
           MARKQ M +FF VMFLN +LL QNH+ISEAPTPQPQ  G N P PM GVTEGSL+P+ECG
Sbjct: 1   MARKQTMMIFFLVMFLNWVLLVQNHAISEAPTPQPQPIG-NHPGPMPGVTEGSLQPQECG 60

Query: 61  GRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP 117
            RC  RCSKTAFKKPCMFFCQKCCAKCLCVP+GTYGNKQSCPCYN+WKTKRGGPKCP
Sbjct: 61  PRCTDRCSKTAFKKPCMFFCQKCCAKCLCVPFGTYGNKQSCPCYNDWKTKRGGPKCP 116

[Close]

BLAST of Cp4.1LG18g03150 vs. ExPASy TrEMBL
Match: A0A1S3CMR4 (protein GAST1-like OS=Cucumis melo OX=3656 GN=LOC103502695 PE=3 SV=1)

HSP 1 Score: 205 bits (522), Expect = 1.77e-66
Identity = 94/118 (79.66%), Postives = 104/118 (88.14%), Query Frame = 0


Query: 1   MARKQIME-MFFAVMFLNCLLLAQNHSISEAPTPQPQSGGGNSPDPMHGVTEGSLEPEEC 60
           M RKQI+E + F VM LNC+LLA N +ISEAPTPQPQ+   N  +PMHGVTEGSL+P+EC
Sbjct: 1   MGRKQIIEILLFVVMLLNCVLLAHNQAISEAPTPQPQTSA-NYSNPMHGVTEGSLQPQEC 60

Query: 61  GGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP 117
           G RC GRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQ+CPCYN+WKTKRGGPKCP
Sbjct: 61  GPRCTGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP 117

[Close]

BLAST of Cp4.1LG18g03150 vs. ExPASy TrEMBL
Match: A0A0A0LI43 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G841990 PE=3 SV=1)

HSP 1 Score: 193 bits (491), Expect = 6.04e-62
Identity = 85/104 (81.73%), Postives = 93/104 (89.42%), Query Frame = 0


Query: 14  MFLNCLLLAQNHSISEAPTPQPQSGGGNSPDPMHGVTEGSLEPEECGGRCAGRCSKTAFK 73
           M LNC+LL  N +ISEAPTPQPQ+   N  +PMHGVTEGSL+P+ECG RC GRCSKTAFK
Sbjct: 1   MLLNCVLLVHNLAISEAPTPQPQTSS-NYSNPMHGVTEGSLQPQECGARCTGRCSKTAFK 60

Query: 74  KPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP 117
           KPCMFFCQKCCAKCLCVPYGTYGNKQ+CPCYN+WKTKRGGPKCP
Sbjct: 61  KPCMFFCQKCCAKCLCVPYGTYGNKQTCPCYNQWKTKRGGPKCP 103

[Close]

BLAST of Cp4.1LG18g03150 vs. TAIR 10
Match: AT1G74670.1 (Gibberellin-regulated family protein )

HSP 1 Score: 123.2 bits (308), Expect = 1.3e-28
Identity = 50/66 (75.76%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 52  GSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKR 111
           GSL+  +CGG+C  RCS T + KPCMFFCQKCCAKCLCVP GTYGNKQ CPCYN WKT++
Sbjct: 36  GSLKSYQCGGQCTRRCSNTKYHKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQ 95

Query: 112 GGPKCP 118
           GGPKCP
Sbjct: 96  GGPKCP 101

[Close]

BLAST of Cp4.1LG18g03150 vs. TAIR 10
Match: AT3G10185.1 (Gibberellin-regulated family protein )

HSP 1 Score: 116.7 bits (291), Expect = 1.3e-26
Identity = 47/60 (78.33%), Postives = 49/60 (81.67%), Query Frame = 0


Query: 58  ECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP 117
           ECG RC  RCS T +KKPC+FFC KCC KCLCVP GTYGNKQ CPCYN WKTK GGPKCP
Sbjct: 44  ECGPRCGDRCSNTQYKKPCLFFCNKCCNKCLCVPPGTYGNKQVCPCYNNWKTKSGGPKCP 103

[Close]

BLAST of Cp4.1LG18g03150 vs. TAIR 10
Match: AT3G02885.1 (GAST1 protein homolog 5 )

HSP 1 Score: 116.3 bits (290), Expect = 1.6e-26
Identity = 46/66 (69.70%), Postives = 54/66 (81.82%), Query Frame = 0


Query: 52  GSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKR 111
           G L+P++C  +C+ RCS T+ KKPCMFFC KCC KCLCVP GT+GNKQ+CPCYN WKTK 
Sbjct: 32  GKLKPQQCNSKCSFRCSATSHKKPCMFFCLKCCKKCLCVPPGTFGNKQTCPCYNNWKTKE 91

Query: 112 GGPKCP 118
           G PKCP
Sbjct: 92  GRPKCP 97

[Close]

BLAST of Cp4.1LG18g03150 vs. TAIR 10
Match: AT2G30810.1 (Gibberellin-regulated family protein )

HSP 1 Score: 115.9 bits (289), Expect = 2.1e-26
Identity = 57/112 (50.89%), Postives = 66/112 (58.93%), Query Frame = 0


Query: 6   IMEMFFAVMFLNCLLLAQNHSISEAPTPQPQSGGGNSPDPMHGVTEGSLEPEECGGRCAG 65
           I  + FA  F N      +   S+A  P     GG          EGSL+PEEC   C  
Sbjct: 10  ISSLLFATQFSN-----GDELESQAQAPAIHKNGG----------EGSLKPEECPKACEY 69

Query: 66  RCSKTAFKKPCMFFCQKCCAKCLCVPYGTYGNKQSCPCYNEWKTKRGGPKCP 118
           RCS T+ +KPC+FFC KCC KCLCVP GTYG+K+ CPCYN W TK GGPKCP
Sbjct: 70  RCSATSHRKPCLFFCNKCCNKCLCVPSGTYGHKEECPCYNNWTTKEGGPKCP 106

[Close]

BLAST of Cp4.1LG18g03150 vs. TAIR 10
Match: AT5G15230.1 (GAST1 protein homolog 4 )

HSP 1 Score: 98.6 bits (244), Expect = 3.5e-21
Identity = 44/81 (54.32%), Postives = 49/81 (60.49%), Query Frame = 0


Query: 37  SGGGNSPDPMHGVTEGSLEPEECGGRCAGRCSKTAFKKPCMFFCQKCCAKCLCVPYGTYG 96
           S G N          GSL+  +C   C  RC KT + K C+ FC KCC KCLCVP G YG
Sbjct: 26  SSGSNVKWSQKRYGPGSLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYG 85

Query: 97  NKQSCPCYNEWKTKRGGPKCP 118
           NKQ C CYN WKT+ GGPKCP
Sbjct: 86  NKQVCSCYNNWKTQEGGPKCP 106

The following BLAST results are available for this feature:

BLAST of Cp4.1LG18g03150 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P27057	2.5e-32	57.14	Protein GAST1 OS=Solanum lycopersicum OX=4081 GN=GAST1 PE=2 SV=1	[more]
Q6NMQ7	1.9e-27	75.76	Gibberellin-regulated protein 6 OS=Arabidopsis thaliana OX=3702 GN=GASA6 PE=3 SV...	[more]
A8MR46	1.8e-25	78.33	Gibberellin-regulated protein 13 OS=Arabidopsis thaliana OX=3702 GN=GASA13 PE=3 ...	[more]
Q84J95	2.3e-25	69.70	Gibberellin-regulated protein 5 OS=Arabidopsis thaliana OX=3702 GN=GASA5 PE=2 SV...	[more]
Q6GKX7	3.0e-25	50.89	Gibberellin-regulated protein 12 OS=Arabidopsis thaliana OX=3702 GN=GASA12 PE=3 ...	[more]

BLAST of Cp4.1LG18g03150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023516497.1	1.87e-86	100.00	protein GAST1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022980754.1	3.49e-80	94.07	protein GAST1-like [Cucurbita maxima]	[more]
XP_022930592.1	4.80e-80	93.16	protein GAST1-like [Cucurbita moschata]	[more]
KAG6581671.1	2.19e-75	90.60	Protein GAST1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038903614.1	2.21e-69	82.05	protein GAST1 [Benincasa hispida]	[more]

BLAST of Cp4.1LG18g03150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J049	1.69e-80	94.07	protein GAST1-like OS=Cucurbita maxima OX=3661 GN=LOC111480028 PE=3 SV=1	[more]
A0A6J1EQZ6	2.32e-80	93.16	protein GAST1-like OS=Cucurbita moschata OX=3662 GN=LOC111436994 PE=3 SV=1	[more]
A0A6J1E399	2.96e-67	82.05	protein GAST1 OS=Momordica charantia OX=3673 GN=LOC111025644 PE=3 SV=1	[more]
A0A1S3CMR4	1.77e-66	79.66	protein GAST1-like OS=Cucumis melo OX=3656 GN=LOC103502695 PE=3 SV=1	[more]
A0A0A0LI43	6.04e-62	81.73	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G841990 PE=3 SV=1	[more]

BLAST of Cp4.1LG18g03150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G74670.1	1.3e-28	75.76	Gibberellin-regulated family protein	[more]
AT3G10185.1	1.3e-26	78.33	Gibberellin-regulated family protein	[more]
AT3G02885.1	1.6e-26	69.70	GAST1 protein homolog 5	[more]
AT2G30810.1	2.1e-26	50.89	Gibberellin-regulated family protein	[more]
AT5G15230.1	3.5e-21	54.32	GAST1 protein homolog 4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003854	Gibberellin regulated protein	PFAM	PF02704	GASA	coord: 58..117 e-value: 1.1E-21 score: 76.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..60
None	No IPR available	PANTHER	PTHR23201	EXTENSIN, PROLINE-RICH PROTEIN	coord: 2..117
None	No IPR available	PANTHER	PTHR23201:SF52	GIBBERELLIN-REGULATED PROTEIN 13	coord: 2..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG18g03150.1	Cp4.1LG18g03150.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009740	gibberellic acid mediated signaling pathway
cellular_component	GO:0005576	extracellular region