Cp4.1LG18g02710 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG18g02710
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	pumilio homolog 12-like isoform X1
Location	Cp4.1LG18: 4308554 .. 4316189 (-)
RNA-Seq Expression	Cp4.1LG18g02710
Synteny	Cp4.1LG18g02710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAGATGGGTAATGAACTGGAATTTGCTGATCTAGCGAGGCTTATTGGTGATGAGTTTCCAAATGTTGCATCTGGTAATGCACATAATGAAGAACAAGGCTTGTTTTCGGTACCGGTGAGCTCCTATGAAGGGCCTTCGGTTCGAAATTTCGATAGCAATGGGAATTTGATGGATGGAAATATCTCTATGAGTAAACTCCAGCAATTATCTAGGCAAAATTCCATGCCAGGGGACTCGTCCTTGACGCTTGCGTTTGAGAAGTTGAACTTTGGCGATGAGGCGAAGGGGCGTGCTTGGAAGTCGTTGCAGCAGGGTCATGCCGTTCTGTTGGAAGATCATTACTCAGAGAATTTGAACAAACAATTACACATTATGGATCCATCAGTGTTAGCTTCTTGGGTTTCTTCGAATCACTTGAGTAATGGTGTTCATAGCCCTCATATGACAAAATTTAGCCATCAAAACTCTCCTTCCAGACATATACCTGAACAGTACAATAAGTGGCAGGTTGGTCAGCTACAGTCTTTCGAGACGTCCTCCCCTGCGATGCCGTTAACCCATGAGATGTCTAATGTGTCTTCTCCAAATTTGCAGTTCCCTATCACACCTCAAATGCAGCAAATTTTCCATAATGGGCGGCCTCCGGTTCGTTACATACATCCGCAACAGATAAATCACTGTCAAATTGGTTGGAATTACGCCGAGGAGGATAAGTTGTATAGGATGCATGAGCAGTACCCATACCTGCAGCATCTTCATGAGCAGCAAATTCAATCCCATGAGAACATTGCAAGTAGGATTTCATGTCAGAATCGTAAGCAGCCATATTACGAGGTTCCAATAGCTCACCATCTCGAACAGTCTAATTATGAACCATCTTGGAAGACGTATGCGTTTCATAGGGGTTCAAATCAGTTTAGTCCTGTATTTCCATCACACTATATGGACACAATTCAAGGTATGGAGAAATTTTCCTTTCCTAGAAAGATCCTTGCAAGGAGTCCTAGATTGAACACAGTTGATTNTTGTTGGCCCATTTTAAAACATTATTATTATTCTGTTATCCCGATCATGATTTTTCTACCTAGAGGGAAAAGTCCTCCCTTTTTTGGCCAGTTGTGGGTAAGGAGGGATTTGAACCCTTGACATCGTGTGATACCATTTGTAACGACCCAGATCCACTGCGAGCATATATTGTTATCTTTGGACTTACCTTCAGGCTTTATTAAAACGCGTGCTATAGGGGAAGGTTTCCATACCTTTATAGATGGTGGTTTGTTTTTCTCCTCAACATGGGACATCACAATGGTCCTTCCCTTTTTTGTCGGTTGTGGGCAAGGAGGGATTCAAACCCCTGACATCGTGGTTCGTAGCCACGTGCTCTAATCCTCTGAGCTATAGGCCTCACCCCGTCTCCACTGAATCTGATCTGTTAACATTTGGAAAATAGGACGATTCTTTCTTCACCATCTCTTTAATTGTAAAAGAAGAATGAATCGAAAAAAATTGCTATTGAAACTTTCTTTCTTCTGCTCTCAAGACTCTACAAAGCTCAAACATAGTATAGGAAGAAAATGGCAAATATAATAATAAATAATAATAATTTAAAGTGCAAATATTATATATATATCAAGTAATATAGCAAATTCTCAATTTGAAAAAAAAAAATATTAAAAAATGGACATTCAAACAAACCATATTATAAAACAAAAAAGTACAAATATATATTGTTATAAAGTTTGGTCAAACATTAGAATAATATGAAATCTTTGTTCATATAAAATATTTGAAAAAGACATTATTTTAAGGAAAGGTAGAGAGAGAGAGAGAGAAATTAAAAAAAAAAAAAAATAAATAAATAAAGAATTTGTTTTGATTTTGATATCTCCAACAATTCCCCCAAAACAAACAAAACCCATCAGTGTAAGCCTCACACACACAGAGTGAAAGAAGAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGGAAGAAACAATGGAAAACGTAACACTCCAAATCCATGCAGGTTACTTGATTTCTATCTCTTTTTGATTGATATTTACAAATCTCTCTTTATTTTTCCTATAATTTCTCCTCCTTTAATCCTTCTCTTCTTCTTCACGCCGCCTCTCTTCTTCCTCTTCTGCTTCTTCTTCTTCTTCTTCTCCTACACCGCTTTGCCTTCCCTTTCGATCCCCCTTCTATTCCATTCGATCATTCATGGAAAACCCACATTTTCTTTTCCAACTTCTTTCATAAAAAACTTTCCCTTTTTCCTCCACATTCCCCCTTTTCGCCTTTTGCTCATCGTTTACTGGGTTAGTCTTGATTGATCCTTTTGCATTTTTTGTGTTCTTGGAGCTCTTGCGATTCTGATTTTGTTTGATCGAGTTCTGTGAGGTGATGACCCTGTTTTTGATTTTGATGATCGAGCATGTTTTTGGGAGTTTTCTTTGTCTATTTGTGTGTGTGTTCTTAGAAGACTTTTGGGTTTTTGATCTACATGAATGTTGTTTTTTCATTGTAATGAAGAAGGGTACACTCTATTAGTGAGCGATCGTGATAAGTTTTATGGGTTTGGTGATTTTTGATCGGATTCTGATTATTGGGTTTTGTTCTAAATTTGTTGTTCTTATCTGGGTTGTGGGATTATAGTGATTTGATTGCTGTTCTTTGCAATGTAGATTGGGAATTTGTTCGAATTATGAACTGATCGTTGAAACTGAAGAACTGTTTGCCTTTTGCTGCTTTATAGGCTGAAGTAGGAACGTTTGTGGTACTGTTTCATTTGTTCTTTAGGTGAGGGGTTTGCTTGTGAGATACAACAATGGAGGAGATGGGTAATGAACTGGAATTTGCTGATCTAGCGAGGCTTATTGGTGATGAGTTTCCAAATGTTGCATCTGGTAATGCACATAATGAAGAACAAGGCTTGTTTTCGGTACCGGTGAGCTCCTATGAAGGGCCTTCGGTTCGAAATTTCGATAGCAATGGGAATTTGATGGATGGAAATATCTCTATGAGTAAACTCCAGCAATTATCTAGGCAAAATTCCATGCCAGGGGACTCGTCCTTGACGCTTGCGTTTGAGAAGTTGAACTTTGGCGATGAGGCGAAGGGGCGTGCTTGGAAGTCGTTGCAGCAGGGTCATGCCGTTCTGTTGGAAGATCATTACTCAGAGAATTTGAACAAACAATTACACATTATGGATCCATCAGTGTTAGCTTCTTGGGTTTCTTCGAATCACTTGAGTAATGGTGTTCATAGCCCTCATATGACAAAATTTAGCCATCAAAACTCTCCTTCCAGACATATACCTGAACAGTACAATAAGTGGCAGGTTGGTCAGCTACAGTCTTTCGAGACGTCCTCCCCTGCGATGCCGTTAACCCATGAGATGTCTAATGTGTCTTCTCCAAATTTGCAGTTCCCTATCACACCTCAAATGCAGCAAATTTTCCATAATGGGCGGCCTCCGGTTCGTTACATACATCCGCAACAGATAAATCACTGTCAAATTGGTTGGAATTACGCCGAGGAGGATAAGTTGTATAGGATGCATGAGCAGTACCCATACCTGCAGCATCTTCATGAGCAGCAAATTCAATCCCATGAGAACATTGCAAGTAGGATTTCATGTCAGAATCGTAAGCAGCCATATTACGAGGTTCCAATAGCTCACCATCTCGAACAGTCTAATTATGAACCATCTTGGAAGACGTATGCGTTTCATAGGGGTTCAAATCAGTTTAGTCCTGTATTTCCATCACACTATATGGACACAATTCAAGGTATGGAGAAATTTTCCTTTCCTAGAAAGATCCTTGCAAGGAGTCCTAGATTGAACACAGTTGATTCTATGAGGTTTATGTCTATTGGTGCTGATAAATCAGCCAATCATGTCAACCAAAGTAGAATAATTCGCTCAAATAGCTGTGTTCGACGCAACAATTTGACTGAATGCATTTATCGTGATCACTCATCTGCCATGTACTCGAAATCAGCAAGTCTTAAGTTGTTTCCTGAAAGATTTAACTCTGTTGATGAAGTCAGGGGTAGAATATTTCTCATGGCTAAAGACCAACATGGTTGTCGTTTCTTGCAACGAAAATTTGTGGAGGGTACAGATGAAGATATTGAGAAGATTTTCGATGAAATCATCGATCATGTTGTTGACCTCATGGTAGATGCATTTGGAAATTATCTAGTACAGAAGCTGCTTGAAGTTTGTAACGAAAATCAACGGATGCAAATTCTACATAGAATTACACAGAACCACGGCGAACTTGTTATAATTTCATGTGACATGCATGGGTACGCTCTTTTCCTGTCCTTTTCGATACCTCACGGGTCGTATATCCTAAATTCTTCTATCTTTACCACAGGACTCGTGCTATTCAGAAGGTTATTGAGACTCTTAAAACACAAGAGCAAGTCGACATGATTATCTCGGCTTTAAAGCCTGGTATAGTTACTTTGATGAAGAACATAAATGGAAACCATGTGGCACAACATTGCCTTGATTATTTAATGCCTAGTTGCCGCGAGGTGAGGATTATATTTCCCGATCTGTTTCAAGTGTGAAGATACTCACCTTTTCATCTGTAGTTTCGTCGTTTAGAACAACACGAAGGCCATCAGTATCTGTTTGATCATAGGAAACTATAAAATAAATTCCATACGTGATGCAACGGAGTAATCGTTTTTATTTGCATCTTTCTTGAGATTTTTGCTATTTTCATTCAAATTGTTCCTTTGGTTATTTCCCACTCAAGAAAAAGCATAGTCTTCAAGTAGTAGTCTTTGATAGCTCTTTGAACTGATGTGTTAGAACCTAATTTATGATCTGAACTACAATCTATTCTAGAAAATTTGTGGTAATAAGAACGAACGATCGCACGCGGGATGGGAATTTCTTTCTTTCTTTTCTTTTCGTAGATTTCAATGTTAATGTTGTTGCTGCTTGTGTTCTCATCTGTTACTGTTTTCGCTGCAGTTACTATTTGATGCTGCAAGAAATAGTTGTGTTGATCTTGCAACTGATCGCCACGGTTGTTGTGTTCTTCAAAAATGCCTCAGTTGTTCCAATAGCTTAGAACGAGATAATTTAATAAGCGAGATCACTCAAAATGCGCTGATTATTTCCCAAGATCAATACGGGTAATTCTATGCTCTCTCCCTTTCATTTTTCTCTCTCTATCTCATGTTCTTTGGTTTAAGTACTACTTTGGTCCTGTACTTTCGATTTTGGTTCATTATGGTCTCTATACTTTCAGAACGCTTAAATAGTGATCCTTTTAGGACCACAATTAACCAAAATCGAACGTACATGGATGAGATAAGAACGAACATTTTGCAAGTATAGAGGCTAAGTGAACCGAAACTGAAACTAGGAGGATCAAAGTAGTGTGTCTTTTATTTATTTTGGAAACAGATCAAGAAAAAGTTTTGGATTGGTCTAAAATAAGTATGAATATTAAGAATTATTCTCTTTGTAGCCATAGGATCATGTTAGCTTTGTTTTCTGACTCATATTCAACTAAAGTACGAATGTTGGAGTTGATTTGGAACTAAGAACGTGAACTGACTAAATTAAATTATATGCAGGAACTATGTTGTGCAATTCATCCTCAAGCTTAATCAGCGATGGGCTATGGAAGCTATACACAAACAGCTAGAGGGTAATTATGGGGACTTGTCCATGCAGAAATATAGTAGCAACGTCGTCGAAAAGTGCCTGCTATTTGCATATGGAGGACAACTTCCTAAAATTATGCATGAGTTGATCAATGATCCACAATTTGGTAAAATCATGCAGGACCCATATGGCAATTATGTAATTCAAACGGCATTGGGTAATACAGAGGTTAGGGCCAAGATTTCCCTTTTCTTTTTGGTAATTGTGTTCATATATGAAGAATGTGTGACGCCTTCTATTGTCAAACGGTGCTCGTAACTTTTCAAATTTGGAAACGTTACTATAAAAGTCATCTTAATGAAATAAAAACTATGCATCCCTCGTTTCAACGTCATGACAATTTTGCTGATTAGGTTAGCATAGTTCAATTGGTTCAAGCATATGCCTTCAGTGAAGAGGTTAAAGATTCAATTCTCCTAACCCCATGTGTGGTTTAGCTTAAAATGGTGTGAGGGGACCTATACCTTCGGTGAAGTGGTTAAAGATTCAATTCTCCTAACCCCACGTGTCGTTTAGCTTAAAATGGTGTGAGGGCGTCTATACCTTCAGTGAAGAGGTTAAAGATTCAATTCTCCTAACCCCACGTGTCGTTTAGCTTAAAATGGTGTGAGGGGGTCCATACCTTCAGTGAAGAGGTTAAAGATTCAATTCTCCTAACCCCACGTGTCGTTTAGTTTAAAATGGTATGAGGGGGTCTATACCTTCAGTGAAGAGGTTAAAGATTCAATTCTCCTGACCCCACGTGTTATTTAGTTTAAAATGGTGTGAGGGGGTCTATACCTTCAGTGAAGAGGTTAAAGATTCAATTCTCCTAACCCCACGTGTCGTTTAGCTTAAAATGGTGTGAGGGGGTCCATACCTTCAGTGAAGAGGTTAAAGATTCAATTCTCCTAACCCCACGTGTCGTTTAGTTTAAAATGGTATGAGGGGGTCTATACCTTCAGTGAAGAGGTTAAAGATTCAATTCTCCTGACCCCACGTGTTATTTAGTTTAAAATGGTGTGAAGGGGTCTATACCTTCCGTGAAGAGGTTAAAGATTCAATTCTCCTAACCCCACGTGTCGTTTAACTTAAAATGGTTGGAGACCATGGAAGGATTACTCTTTGCGTTGTCCCATTTTCGAATCACACTAGCAAAATTTTCTTAGAAGATACGCTTTCTTTTACTGACTGACTCATTGACCCTGAACAACCTTTCTAGTCAAAGATCCTAACGCTTCGGTGCTATGGAAACTCGAACATAAAATGTCGAAATTTCTTTTATATTATATCGTCCAACTGTTTTCGCACTTTTCTAATGCAAAGGAAGGCTTTTGGAAAACTGATTTGTAATGTAATTAGATGAATGTCTGTTTGTCTGCCATGCAGGGTAATCTCCATACTAAATTGGTCGAAGCGATAAGGCCACATATTCCTGTACTCAGGACGAGTCCATACGGAAAGAAAGTCCTTGCAGTATTTGGAAAATGCAACTAACCGTTTACTCGAGCGCTTCTAGTCATCGTATCATCTTGGTAAGAAAGCATAACAATTATTTTCCTTCAGTACTTTCTTTTAGTAAAGAATTTAGGCCAGGTCTATCTGGAAACAAACTTATCATGGGTGAAGACATATCCATATCTTCCCTAATCGTCGTTTTGGATAAGAGTTTAGGTTGGTCGTTTGGCTCGTTCATTGGCCGTGTTGTTTTTCTTGCTTTTTTCTCTCGTTTATTCGGCATAGTAAATAAATCGGTGAAGGTATAGAAGAGGGTATATGCAGTGTTGTACATTTGTTGGGATTCTGTTTCTGAAGCTCATTGCATGTAGAAGAAGAGTATATGTGTGAGATATGAGAGGGGCTTGCTTTGTATCATGCTACTGCTGCTTCTGCTGCTATCTTTTTTGGTTGGGCTGTGTAATTATCTCTCCTGTGAATTTATTGCAATTTGG

mRNA sequence

ATGGAGGAGATGGGTAATGAACTGGAATTTGCTGATCTAGCGAGGCTTATTGGTGATGAGTTTCCAAATGTTGCATCTGGTAATGCACATAATGAAGAACAAGGCTTGTTTTCGGTACCGGTGAGCTCCTATGAAGGGCCTTCGGTTCGAAATTTCGATAGCAATGGGAATTTGATGGATGGAAATATCTCTATGAGTAAACTCCAGCAATTATCTAGGCAAAATTCCATGCCAGGGGACTCGTCCTTGACGCTTGCGTTTGAGAAGTTGAACTTTGGCGATGAGGCGAAGGGGCGTGCTTGGAAGTCGTTGCAGCAGGGTCATGCCGTTCTGTTGGAAGATCATTACTCAGAGAATTTGAACAAACAATTACACATTATGGATCCATCAGTGTTAGCTTCTTGGGTTTCTTCGAATCACTTGAGTAATGGTGTTCATAGCCCTCATATGACAAAATTTAGCCATCAAAACTCTCCTTCCAGACATATACCTGAACAGTACAATAAGTGGCAGGTTGGTCAGCTACAGTCTTTCGAGACGTCCTCCCCTGCGATGCCGTTAACCCATGAGATGTCTAATGTGTCTTCTCCAAATTTGCAGTTCCCTATCACACCTCAAATGCAGCAAATTTTCCATAATGGGCGGCCTCCGGTTCGTTACATACATCCGCAACAGATAAATCACTGTCAAATTGGTTGGAATTACGCCGAGGAGGATAAGTTGTATAGGATGCATGAGCAGTACCCATACCTGCAGCATCTTCATGAGCAGCAAATTCAATCCCATGAGAACATTGCAAGTAGGATTTCATGTCAGAATCGTAAGCAGCCATATTACGAGGTTCCAATAGCTCACCATCTCGAACAGTCTAATTATGAACCATCTTGGAAGACGTATGCGTTTCATAGGGGTTCAAATCAGTTTAGTCCTGTATTTCCATCACACTATATGGACACAATTCAAGGCTGAAGTAGGAACGTTTGTGGTACTGTTTCATTTGTTCTTTAGGTGAGGGGTTTGCTTGTGAGATACAACAATGGAGGAGATGGGTAATGAACTGGAATTTGCTGATCTAGCGAGGCTTATTGGTGATGAGTTTCCAAATGTTGCATCTGGTAATGCACATAATGAAGAACAAGGCTTGTTTTCGGTACCGGTGAGCTCCTATGAAGGGCCTTCGGTTCGAAATTTCGATAGCAATGGGAATTTGATGGATGGAAATATCTCTATGAGTAAACTCCAGCAATTATCTAGGCAAAATTCCATGCCAGGGGACTCGTCCTTGACGCTTGCGTTTGAGAAGTTGAACTTTGGCGATGAGGCGAAGGGGCGTGCTTGGAAGTCGTTGCAGCAGGGTCATGCCGTTCTGTTGGAAGATCATTACTCAGAGAATTTGAACAAACAATTACACATTATGGATCCATCAGTGTTAGCTTCTTGGGTTTCTTCGAATCACTTGAGTAATGGTGTTCATAGCCCTCATATGACAAAATTTAGCCATCAAAACTCTCCTTCCAGACATATACCTGAACAGTACAATAAGTGGCAGGTTGGTCAGCTACAGTCTTTCGAGACGTCCTCCCCTGCGATGCCGTTAACCCATGAGATGTCTAATGTGTCTTCTCCAAATTTGCAGTTCCCTATCACACCTCAAATGCAGCAAATTTTCCATAATGGGCGGCCTCCGGTTCGTTACATACATCCGCAACAGATAAATCACTGTCAAATTGGTTGGAATTACGCCGAGGAGGATAAGTTGTATAGGATGCATGAGCAGTACCCATACCTGCAGCATCTTCATGAGCAGCAAATTCAATCCCATGAGAACATTGCAAGTAGGATTTCATGTCAGAATCGTAAGCAGCCATATTACGAGGTTCCAATAGCTCACCATCTCGAACAGTCTAATTATGAACCATCTTGGAAGACGTATGCGTTTCATAGGGGTTCAAATCAGTTTAGTCCTGTATTTCCATCACACTATATGGACACAATTCAAGGTATGGAGAAATTTTCCTTTCCTAGAAAGATCCTTGCAAGGAGTCCTAGATTGAACACAGTTGATTCTATGAGGTTTATGTCTATTGGTGCTGATAAATCAGCCAATCATGTCAACCAAAGTAGAATAATTCGCTCAAATAGCTGTGTTCGACGCAACAATTTGACTGAATGCATTTATCGTGATCACTCATCTGCCATGTACTCGAAATCAGCAAGTCTTAAGTTGTTTCCTGAAAGATTTAACTCTGTTGATGAAGTCAGGGGTAGAATATTTCTCATGGCTAAAGACCAACATGGTTGTCGTTTCTTGCAACGAAAATTTGTGGAGGGTACAGATGAAGATATTGAGAAGATTTTCGATGAAATCATCGATCATGTTGTTGACCTCATGGTAGATGCATTTGGAAATTATCTAGTACAGAAGCTGCTTGAAGTTTGTAACGAAAATCAACGGATGCAAATTCTACATAGAATTACACAGAACCACGGCGAACTTGTTATAATTTCATGTGACATGCATGGGACTCGTGCTATTCAGAAGGTTATTGAGACTCTTAAAACACAAGAGCAAGTCGACATGATTATCTCGGCTTTAAAGCCTGGTATAGTTACTTTGATGAAGAACATAAATGGAAACCATGTGGCACAACATTGCCTTGATTATTTAATGCCTAGTTGCCGCGAGTTACTATTTGATGCTGCAAGAAATAGTTGTGTTGATCTTGCAACTGATCGCCACGGTTGTTGTGTTCTTCAAAAATGCCTCAGTTGTTCCAATAGCTTAGAACGAGATAATTTAATAAGCGAGATCACTCAAAATGCGCTGATTATTTCCCAAGATCAATACGGGAACTATGTTGTGCAATTCATCCTCAAGCTTAATCAGCGATGGGCTATGGAAGCTATACACAAACAGCTAGAGGGTAATTATGGGGACTTGTCCATGCAGAAATATAGTAGCAACGTCGTCGAAAAGTGCCTGCTATTTGCATATGGAGGACAACTTCCTAAAATTATGCATGAGTTGATCAATGATCCACAATTTGGTAAAATCATGCAGGACCCATATGGCAATTATGTAATTCAAACGGCATTGGGTAATACAGAGGGTAATCTCCATACTAAATTGGTCGAAGCGATAAGGCCACATATTCCTGTACTCAGGACGAGTCCATACGGAAAGAAAGTCCTTGCAGTATTTGGAAAATGCAACTAACCGTTTACTCGAGCGCTTCTAGTCATCGTATCATCTTGGTAAGAAAGCATAACAATTATTTTCCTTCAGTACTTTCTTTTAGTAAAGAATTTAGGCCAGGTCTATCTGGAAACAAACTTATCATGGGTGAAGACATATCCATATCTTCCCTAATCGTCGTTTTGGATAAGAGTTTAGGTTGGTCGTTTGGCTCGTTCATTGGCCGTGTTGTTTTTCTTGCTTTTTTCTCTCGTTTATTCGGCATAGTAAATAAATCGGTGAAGGTATAGAAGAGGGTATATGCAGTGTTGTACATTTGTTGGGATTCTGTTTCTGAAGCTCATTGCATGTAGAAGAAGAGTATATGTGTGAGATATGAGAGGGGCTTGCTTTGTATCATGCTACTGCTGCTTCTGCTGCTATCTTTTTTGGTTGGGCTGTGTAATTATCTCTCCTGTGAATTTATTGCAATTTGG

Coding sequence (CDS)

ATGGAGGAGATGGGTAATGAACTGGAATTTGCTGATCTAGCGAGGCTTATTGGTGATGAGTTTCCAAATGTTGCATCTGGTAATGCACATAATGAAGAACAAGGCTTGTTTTCGGTACCGGTGAGCTCCTATGAAGGGCCTTCGGTTCGAAATTTCGATAGCAATGGGAATTTGATGGATGGAAATATCTCTATGAGTAAACTCCAGCAATTATCTAGGCAAAATTCCATGCCAGGGGACTCGTCCTTGACGCTTGCGTTTGAGAAGTTGAACTTTGGCGATGAGGCGAAGGGGCGTGCTTGGAAGTCGTTGCAGCAGGGTCATGCCGTTCTGTTGGAAGATCATTACTCAGAGAATTTGAACAAACAATTACACATTATGGATCCATCAGTGTTAGCTTCTTGGGTTTCTTCGAATCACTTGAGTAATGGTGTTCATAGCCCTCATATGACAAAATTTAGCCATCAAAACTCTCCTTCCAGACATATACCTGAACAGTACAATAAGTGGCAGGTTGGTCAGCTACAGTCTTTCGAGACGTCCTCCCCTGCGATGCCGTTAACCCATGAGATGTCTAATGTGTCTTCTCCAAATTTGCAGTTCCCTATCACACCTCAAATGCAGCAAATTTTCCATAATGGGCGGCCTCCGGTTCGTTACATACATCCGCAACAGATAAATCACTGTCAAATTGGTTGGAATTACGCCGAGGAGGATAAGTTGTATAGGATGCATGAGCAGTACCCATACCTGCAGCATCTTCATGAGCAGCAAATTCAATCCCATGAGAACATTGCAAGTAGGATTTCATGTCAGAATCGTAAGCAGCCATATTACGAGGTTCCAATAGCTCACCATCTCGAACAGTCTAATTATGAACCATCTTGGAAGACGTATGCGTTTCATAGGGGTTCAAATCAGTTTAGTCCTGTATTTCCATCACACTATATGGACACAATTCAAGGCTGA

Protein sequence

MEEMGNELEFADLARLIGDEFPNVASGNAHNEEQGLFSVPVSSYEGPSVRNFDSNGNLMDGNISMSKLQQLSRQNSMPGDSSLTLAFEKLNFGDEAKGRAWKSLQQGHAVLLEDHYSENLNKQLHIMDPSVLASWVSSNHLSNGVHSPHMTKFSHQNSPSRHIPEQYNKWQVGQLQSFETSSPAMPLTHEMSNVSSPNLQFPITPQMQQIFHNGRPPVRYIHPQQINHCQIGWNYAEEDKLYRMHEQYPYLQHLHEQQIQSHENIASRISCQNRKQPYYEVPIAHHLEQSNYEPSWKTYAFHRGSNQFSPVFPSHYMDTIQG

Homology

[Close]

BLAST of Cp4.1LG18g02710 vs. NCBI nr
Match: XP_023516434.1 (pumilio homolog 12-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023516435.1 pumilio homolog 12-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023516436.1 pumilio homolog 12-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023516437.1 pumilio homolog 12-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023516438.1 pumilio homolog 12-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023516439.1 pumilio homolog 12-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023516440.1 pumilio homolog 12-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023516441.1 pumilio homolog 12-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 666 bits (1719), Expect = 1.43e-235
Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0


Query: 1   MEEMGNELEFADLARLIGDEFPNVASGNAHNEEQGLFSVPVSSYEGPSVRNFDSNGNLMD 60
           MEEMGNELEFADLARLIGDEFPNVASGNAHNEEQGLFSVPVSSYEGPSVRNFDSNGNLMD
Sbjct: 1   MEEMGNELEFADLARLIGDEFPNVASGNAHNEEQGLFSVPVSSYEGPSVRNFDSNGNLMD 60

Query: 61  GNISMSKLQQLSRQNSMPGDSSLTLAFEKLNFGDEAKGRAWKSLQQGHAVLLEDHYSENL 120
           GNISMSKLQQLSRQNSMPGDSSLTLAFEKLNFGDEAKGRAWKSLQQGHAVLLEDHYSENL
Sbjct: 61  GNISMSKLQQLSRQNSMPGDSSLTLAFEKLNFGDEAKGRAWKSLQQGHAVLLEDHYSENL 120

Query: 121 NKQLHIMDPSVLASWVSSNHLSNGVHSPHMTKFSHQNSPSRHIPEQYNKWQVGQLQSFET 180
           NKQLHIMDPSVLASWVSSNHLSNGVHSPHMTKFSHQNSPSRHIPEQYNKWQVGQLQSFET
Sbjct: 121 NKQLHIMDPSVLASWVSSNHLSNGVHSPHMTKFSHQNSPSRHIPEQYNKWQVGQLQSFET 180

Query: 181 SSPAMPLTHEMSNVSSPNLQFPITPQMQQIFHNGRPPVRYIHPQQINHCQIGWNYAEEDK 240
           SSPAMPLTHEMSNVSSPNLQFPITPQMQQIFHNGRPPVRYIHPQQINHCQIGWNYAEEDK
Sbjct: 181 SSPAMPLTHEMSNVSSPNLQFPITPQMQQIFHNGRPPVRYIHPQQINHCQIGWNYAEEDK 240

Query: 241 LYRMHEQYPYLQHLHEQQIQSHENIASRISCQNRKQPYYEVPIAHHLEQSNYEPSWKTYA 300
           LYRMHEQYPYLQHLHEQQIQSHENIASRISCQNRKQPYYEVPIAHHLEQSNYEPSWKTYA
Sbjct: 241 LYRMHEQYPYLQHLHEQQIQSHENIASRISCQNRKQPYYEVPIAHHLEQSNYEPSWKTYA 300

Query: 301 FHRGSNQFSPVFPSHYMDTIQG 322
           FHRGSNQFSPVFPSHYMDTIQG
Sbjct: 301 FHRGSNQFSPVFPSHYMDTIQG 322

[Close]

BLAST of Cp4.1LG18g02710 vs. NCBI nr
Match: KAG6590075.1 (Pumilio-like 12, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 656 bits (1693), Expect = 1.26e-231
Identity = 316/322 (98.14%), Postives = 319/322 (99.07%), Query Frame = 0


Query: 1   MEEMGNELEFADLARLIGDEFPNVASGNAHNEEQGLFSVPVSSYEGPSVRNFDSNGNLMD 60
           MEEMGNELEFADLARLIGDEFPNVASGNAHNEEQGLFSVPVSSYEGPSVRNFDSNGNLMD
Sbjct: 1   MEEMGNELEFADLARLIGDEFPNVASGNAHNEEQGLFSVPVSSYEGPSVRNFDSNGNLMD 60

Query: 61  GNISMSKLQQLSRQNSMPGDSSLTLAFEKLNFGDEAKGRAWKSLQQGHAVLLEDHYSENL 120
           GNISMSKLQQLSRQNSMPGDSSLTLAFEKLNFGDEAKGRAWKSLQQGHAVLLEDHYSENL
Sbjct: 61  GNISMSKLQQLSRQNSMPGDSSLTLAFEKLNFGDEAKGRAWKSLQQGHAVLLEDHYSENL 120

Query: 121 NKQLHIMDPSVLASWVSSNHLSNGVHSPHMTKFSHQNSPSRHIPEQYNKWQVGQLQSFET 180
           NKQLHIMDPS+LASW SSNHLSNGVHSPHMTKFSHQNSPSRHIPEQYN WQVGQLQSFET
Sbjct: 121 NKQLHIMDPSMLASWGSSNHLSNGVHSPHMTKFSHQNSPSRHIPEQYNNWQVGQLQSFET 180

Query: 181 SSPAMPLTHEMSNVSSPNLQFPITPQMQQIFHNGRPPVRYIHPQQINHCQIGWNYAEEDK 240
           SSPAMPLTHEM+NVSSPNLQFPITPQMQQIFHNGRPPVRYIHPQQINHCQIGWNY EEDK
Sbjct: 181 SSPAMPLTHEMANVSSPNLQFPITPQMQQIFHNGRPPVRYIHPQQINHCQIGWNYTEEDK 240

Query: 241 LYRMHEQYPYLQHLHEQQIQSHENIASRISCQNRKQPYYEVPIAHHLEQSNYEPSWKTYA 300
           LYRMHEQYPYLQHLH+QQIQSHENIASRISCQNRKQPYYEVPIAHHLEQSNYEPSWKTYA
Sbjct: 241 LYRMHEQYPYLQHLHKQQIQSHENIASRISCQNRKQPYYEVPIAHHLEQSNYEPSWKTYA 300

Query: 301 FHRGSNQFSPVFPSHYMDTIQG 322
           FHRGSNQFSPVFPSHYMDTIQG
Sbjct: 301 FHRGSNQFSPVFPSHYMDTIQG 322

[Close]

BLAST of Cp4.1LG18g02710 vs. NCBI nr
Match: KAG7023743.1 (Pumilio-like 12 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 651 bits (1679), Expect = 1.68e-229
Identity = 314/322 (97.52%), Postives = 317/322 (98.45%), Query Frame = 0


Query: 1   MEEMGNELEFADLARLIGDEFPNVASGNAHNEEQGLFSVPVSSYEGPSVRNFDSNGNLMD 60
           MEEMGNELEFADLARLIGDEFPNVASGNAHNEEQGLFSVPVSSYEGPSVRNFDSNGNLMD
Sbjct: 1   MEEMGNELEFADLARLIGDEFPNVASGNAHNEEQGLFSVPVSSYEGPSVRNFDSNGNLMD 60

Query: 61  GNISMSKLQQLSRQNSMPGDSSLTLAFEKLNFGDEAKGRAWKSLQQGHAVLLEDHYSENL 120
           GNISMSKLQQLSRQNSMPGDSSLTLAFEKLNFGDEAKGRAWKSLQQGHAVL EDHYSENL
Sbjct: 61  GNISMSKLQQLSRQNSMPGDSSLTLAFEKLNFGDEAKGRAWKSLQQGHAVLFEDHYSENL 120

Query: 121 NKQLHIMDPSVLASWVSSNHLSNGVHSPHMTKFSHQNSPSRHIPEQYNKWQVGQLQSFET 180
           NKQLHIMDPS+LASW SSNHLSNGVHSPHMTKFSHQNSPSRHIPEQYN WQVGQLQSFET
Sbjct: 121 NKQLHIMDPSMLASWGSSNHLSNGVHSPHMTKFSHQNSPSRHIPEQYNNWQVGQLQSFET 180

Query: 181 SSPAMPLTHEMSNVSSPNLQFPITPQMQQIFHNGRPPVRYIHPQQINHCQIGWNYAEEDK 240
           SSPAM LTHEM+NVSSPNLQFPITPQMQQIFHNGRPPVRYIHPQQINHCQIGWNY EEDK
Sbjct: 181 SSPAMLLTHEMANVSSPNLQFPITPQMQQIFHNGRPPVRYIHPQQINHCQIGWNYTEEDK 240

Query: 241 LYRMHEQYPYLQHLHEQQIQSHENIASRISCQNRKQPYYEVPIAHHLEQSNYEPSWKTYA 300
           LYRMHEQYPYLQHLH+QQIQSHENIASRISCQNRKQPYYEVPIAHHLEQSNYEPSWKTYA
Sbjct: 241 LYRMHEQYPYLQHLHKQQIQSHENIASRISCQNRKQPYYEVPIAHHLEQSNYEPSWKTYA 300

Query: 301 FHRGSNQFSPVFPSHYMDTIQG 322
           FHRGSNQFSPVFPSHYMDTIQG
Sbjct: 301 FHRGSNQFSPVFPSHYMDTIQG 322

[Close]

BLAST of Cp4.1LG18g02710 vs. NCBI nr
Match: XP_022961267.1 (pumilio homolog 12-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 647 bits (1670), Expect = 2.10e-229
Identity = 313/321 (97.51%), Postives = 316/321 (98.44%), Query Frame = 0


Query: 1   MEEMGNELEFADLARLIGDEFPNVASGNAHNEEQGLFSVPVSSYEGPSVRNFDSNGNLMD 60
           MEEMGNELEFADLARLIGDEFPNVASGNAHNEEQGLFSVPVSSYEGPSV+NFDSNGNLMD
Sbjct: 1   MEEMGNELEFADLARLIGDEFPNVASGNAHNEEQGLFSVPVSSYEGPSVQNFDSNGNLMD 60

Query: 61  GNISMSKLQQLSRQNSMPGDSSLTLAFEKLNFGDEAKGRAWKSLQQGHAVLLEDHYSENL 120
           GNISMSKLQQLSRQNSMPGDSSLTLAFEKLNFGDEAKGRAWKSLQQGHAVLLEDHYSENL
Sbjct: 61  GNISMSKLQQLSRQNSMPGDSSLTLAFEKLNFGDEAKGRAWKSLQQGHAVLLEDHYSENL 120

Query: 121 NKQLHIMDPSVLASWVSSNHLSNGVHSPHMTKFSHQNSPSRHIPEQYNKWQVGQLQSFET 180
           NKQLHIMDPSVLASW SSNHLSNGVHSPHMTKFSHQNSPSRHIPEQYN WQVGQLQSFET
Sbjct: 121 NKQLHIMDPSVLASWGSSNHLSNGVHSPHMTKFSHQNSPSRHIPEQYNNWQVGQLQSFET 180

Query: 181 SSPAMPLTHEMSNVSSPNLQFPITPQMQQIFHNGRPPVRYIHPQQINHCQIGWNYAEEDK 240
           SSPAMPLTHEM+NVSSPNLQFP TPQMQQIFHNGRPPVRYIHPQQINHCQIGWNY EEDK
Sbjct: 181 SSPAMPLTHEMANVSSPNLQFPTTPQMQQIFHNGRPPVRYIHPQQINHCQIGWNYNEEDK 240

Query: 241 LYRMHEQYPYLQHLHEQQIQSHENIASRISCQNRKQPYYEVPIAHHLEQSNYEPSWKTYA 300
           LYRMHEQYPYLQHLH+QQIQSHENIASRISCQNRKQPYYEVPIAHHLEQSNYEPSWKT A
Sbjct: 241 LYRMHEQYPYLQHLHKQQIQSHENIASRISCQNRKQPYYEVPIAHHLEQSNYEPSWKTSA 300

Query: 301 FHRGSNQFSPVFPSHYMDTIQ 321
           FHRGSNQFSPVFPSHYMDTIQ
Sbjct: 301 FHRGSNQFSPVFPSHYMDTIQ 321

[Close]

BLAST of Cp4.1LG18g02710 vs. NCBI nr
Match: XP_022961257.1 (pumilio homolog 12-like isoform X1 [Cucurbita moschata] >XP_022961259.1 pumilio homolog 12-like isoform X1 [Cucurbita moschata] >XP_022961260.1 pumilio homolog 12-like isoform X1 [Cucurbita moschata] >XP_022961261.1 pumilio homolog 12-like isoform X1 [Cucurbita moschata] >XP_022961262.1 pumilio homolog 12-like isoform X1 [Cucurbita moschata] >XP_022961263.1 pumilio homolog 12-like isoform X1 [Cucurbita moschata] >XP_022961264.1 pumilio homolog 12-like isoform X1 [Cucurbita moschata] >XP_022961265.1 pumilio homolog 12-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 650 bits (1676), Expect = 4.80e-229
Identity = 314/322 (97.52%), Postives = 317/322 (98.45%), Query Frame = 0


Query: 1   MEEMGNELEFADLARLIGDEFPNVASGNAHNEEQGLFSVPVSSYEGPSVRNFDSNGNLMD 60
           MEEMGNELEFADLARLIGDEFPNVASGNAHNEEQGLFSVPVSSYEGPSV+NFDSNGNLMD
Sbjct: 1   MEEMGNELEFADLARLIGDEFPNVASGNAHNEEQGLFSVPVSSYEGPSVQNFDSNGNLMD 60

Query: 61  GNISMSKLQQLSRQNSMPGDSSLTLAFEKLNFGDEAKGRAWKSLQQGHAVLLEDHYSENL 120
           GNISMSKLQQLSRQNSMPGDSSLTLAFEKLNFGDEAKGRAWKSLQQGHAVLLEDHYSENL
Sbjct: 61  GNISMSKLQQLSRQNSMPGDSSLTLAFEKLNFGDEAKGRAWKSLQQGHAVLLEDHYSENL 120

Query: 121 NKQLHIMDPSVLASWVSSNHLSNGVHSPHMTKFSHQNSPSRHIPEQYNKWQVGQLQSFET 180
           NKQLHIMDPSVLASW SSNHLSNGVHSPHMTKFSHQNSPSRHIPEQYN WQVGQLQSFET
Sbjct: 121 NKQLHIMDPSVLASWGSSNHLSNGVHSPHMTKFSHQNSPSRHIPEQYNNWQVGQLQSFET 180

Query: 181 SSPAMPLTHEMSNVSSPNLQFPITPQMQQIFHNGRPPVRYIHPQQINHCQIGWNYAEEDK 240
           SSPAMPLTHEM+NVSSPNLQFP TPQMQQIFHNGRPPVRYIHPQQINHCQIGWNY EEDK
Sbjct: 181 SSPAMPLTHEMANVSSPNLQFPTTPQMQQIFHNGRPPVRYIHPQQINHCQIGWNYNEEDK 240

Query: 241 LYRMHEQYPYLQHLHEQQIQSHENIASRISCQNRKQPYYEVPIAHHLEQSNYEPSWKTYA 300
           LYRMHEQYPYLQHLH+QQIQSHENIASRISCQNRKQPYYEVPIAHHLEQSNYEPSWKT A
Sbjct: 241 LYRMHEQYPYLQHLHKQQIQSHENIASRISCQNRKQPYYEVPIAHHLEQSNYEPSWKTSA 300

Query: 301 FHRGSNQFSPVFPSHYMDTIQG 322
           FHRGSNQFSPVFPSHYMDTIQG
Sbjct: 301 FHRGSNQFSPVFPSHYMDTIQG 322

[Close]

BLAST of Cp4.1LG18g02710 vs. ExPASy TrEMBL
Match: A0A6J1H9Q7 (pumilio homolog 12-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111461817 PE=4 SV=1)

HSP 1 Score: 647 bits (1670), Expect = 1.01e-229
Identity = 313/321 (97.51%), Postives = 316/321 (98.44%), Query Frame = 0


Query: 1   MEEMGNELEFADLARLIGDEFPNVASGNAHNEEQGLFSVPVSSYEGPSVRNFDSNGNLMD 60
           MEEMGNELEFADLARLIGDEFPNVASGNAHNEEQGLFSVPVSSYEGPSV+NFDSNGNLMD
Sbjct: 1   MEEMGNELEFADLARLIGDEFPNVASGNAHNEEQGLFSVPVSSYEGPSVQNFDSNGNLMD 60

Query: 61  GNISMSKLQQLSRQNSMPGDSSLTLAFEKLNFGDEAKGRAWKSLQQGHAVLLEDHYSENL 120
           GNISMSKLQQLSRQNSMPGDSSLTLAFEKLNFGDEAKGRAWKSLQQGHAVLLEDHYSENL
Sbjct: 61  GNISMSKLQQLSRQNSMPGDSSLTLAFEKLNFGDEAKGRAWKSLQQGHAVLLEDHYSENL 120

Query: 121 NKQLHIMDPSVLASWVSSNHLSNGVHSPHMTKFSHQNSPSRHIPEQYNKWQVGQLQSFET 180
           NKQLHIMDPSVLASW SSNHLSNGVHSPHMTKFSHQNSPSRHIPEQYN WQVGQLQSFET
Sbjct: 121 NKQLHIMDPSVLASWGSSNHLSNGVHSPHMTKFSHQNSPSRHIPEQYNNWQVGQLQSFET 180

Query: 181 SSPAMPLTHEMSNVSSPNLQFPITPQMQQIFHNGRPPVRYIHPQQINHCQIGWNYAEEDK 240
           SSPAMPLTHEM+NVSSPNLQFP TPQMQQIFHNGRPPVRYIHPQQINHCQIGWNY EEDK
Sbjct: 181 SSPAMPLTHEMANVSSPNLQFPTTPQMQQIFHNGRPPVRYIHPQQINHCQIGWNYNEEDK 240

Query: 241 LYRMHEQYPYLQHLHEQQIQSHENIASRISCQNRKQPYYEVPIAHHLEQSNYEPSWKTYA 300
           LYRMHEQYPYLQHLH+QQIQSHENIASRISCQNRKQPYYEVPIAHHLEQSNYEPSWKT A
Sbjct: 241 LYRMHEQYPYLQHLHKQQIQSHENIASRISCQNRKQPYYEVPIAHHLEQSNYEPSWKTSA 300

Query: 301 FHRGSNQFSPVFPSHYMDTIQ 321
           FHRGSNQFSPVFPSHYMDTIQ
Sbjct: 301 FHRGSNQFSPVFPSHYMDTIQ 321

[Close]

BLAST of Cp4.1LG18g02710 vs. ExPASy TrEMBL
Match: A0A6J1H9Q4 (pumilio homolog 12-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461817 PE=4 SV=1)

HSP 1 Score: 650 bits (1676), Expect = 2.32e-229
Identity = 314/322 (97.52%), Postives = 317/322 (98.45%), Query Frame = 0


Query: 1   MEEMGNELEFADLARLIGDEFPNVASGNAHNEEQGLFSVPVSSYEGPSVRNFDSNGNLMD 60
           MEEMGNELEFADLARLIGDEFPNVASGNAHNEEQGLFSVPVSSYEGPSV+NFDSNGNLMD
Sbjct: 1   MEEMGNELEFADLARLIGDEFPNVASGNAHNEEQGLFSVPVSSYEGPSVQNFDSNGNLMD 60

Query: 61  GNISMSKLQQLSRQNSMPGDSSLTLAFEKLNFGDEAKGRAWKSLQQGHAVLLEDHYSENL 120
           GNISMSKLQQLSRQNSMPGDSSLTLAFEKLNFGDEAKGRAWKSLQQGHAVLLEDHYSENL
Sbjct: 61  GNISMSKLQQLSRQNSMPGDSSLTLAFEKLNFGDEAKGRAWKSLQQGHAVLLEDHYSENL 120

Query: 121 NKQLHIMDPSVLASWVSSNHLSNGVHSPHMTKFSHQNSPSRHIPEQYNKWQVGQLQSFET 180
           NKQLHIMDPSVLASW SSNHLSNGVHSPHMTKFSHQNSPSRHIPEQYN WQVGQLQSFET
Sbjct: 121 NKQLHIMDPSVLASWGSSNHLSNGVHSPHMTKFSHQNSPSRHIPEQYNNWQVGQLQSFET 180

Query: 181 SSPAMPLTHEMSNVSSPNLQFPITPQMQQIFHNGRPPVRYIHPQQINHCQIGWNYAEEDK 240
           SSPAMPLTHEM+NVSSPNLQFP TPQMQQIFHNGRPPVRYIHPQQINHCQIGWNY EEDK
Sbjct: 181 SSPAMPLTHEMANVSSPNLQFPTTPQMQQIFHNGRPPVRYIHPQQINHCQIGWNYNEEDK 240

Query: 241 LYRMHEQYPYLQHLHEQQIQSHENIASRISCQNRKQPYYEVPIAHHLEQSNYEPSWKTYA 300
           LYRMHEQYPYLQHLH+QQIQSHENIASRISCQNRKQPYYEVPIAHHLEQSNYEPSWKT A
Sbjct: 241 LYRMHEQYPYLQHLHKQQIQSHENIASRISCQNRKQPYYEVPIAHHLEQSNYEPSWKTSA 300

Query: 301 FHRGSNQFSPVFPSHYMDTIQG 322
           FHRGSNQFSPVFPSHYMDTIQG
Sbjct: 301 FHRGSNQFSPVFPSHYMDTIQG 322

[Close]

BLAST of Cp4.1LG18g02710 vs. ExPASy TrEMBL
Match: A0A6J1JIS0 (pumilio homolog 12-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111484953 PE=4 SV=1)

HSP 1 Score: 640 bits (1650), Expect = 1.11e-226
Identity = 308/321 (95.95%), Postives = 312/321 (97.20%), Query Frame = 0


Query: 1   MEEMGNELEFADLARLIGDEFPNVASGNAHNEEQGLFSVPVSSYEGPSVRNFDSNGNLMD 60
           MEEMGNELEFADLARLIGDEFPNVASGNAHNEEQGLFSVPVSSYEGPSVRNFD NGNLMD
Sbjct: 1   MEEMGNELEFADLARLIGDEFPNVASGNAHNEEQGLFSVPVSSYEGPSVRNFDGNGNLMD 60

Query: 61  GNISMSKLQQLSRQNSMPGDSSLTLAFEKLNFGDEAKGRAWKSLQQGHAVLLEDHYSENL 120
           GNISMSK QQLSRQNSMPGDSSLTLAFEKLNFGDE KGRAWKSLQQGHAVLLEDHYSENL
Sbjct: 61  GNISMSKFQQLSRQNSMPGDSSLTLAFEKLNFGDEVKGRAWKSLQQGHAVLLEDHYSENL 120

Query: 121 NKQLHIMDPSVLASWVSSNHLSNGVHSPHMTKFSHQNSPSRHIPEQYNKWQVGQLQSFET 180
           NKQLHIMDPSVLASW SSNHLSNGVH+PHMTKFSHQNSPSRHIPEQYNKWQVGQLQ FE 
Sbjct: 121 NKQLHIMDPSVLASWGSSNHLSNGVHNPHMTKFSHQNSPSRHIPEQYNKWQVGQLQYFEM 180

Query: 181 SSPAMPLTHEMSNVSSPNLQFPITPQMQQIFHNGRPPVRYIHPQQINHCQIGWNYAEEDK 240
           SSPAMPLTHEM+NVSSPNLQFPITPQMQQIFH+GRPPVRYIHPQQINHCQIGWNY EEDK
Sbjct: 181 SSPAMPLTHEMANVSSPNLQFPITPQMQQIFHDGRPPVRYIHPQQINHCQIGWNYTEEDK 240

Query: 241 LYRMHEQYPYLQHLHEQQIQSHENIASRISCQNRKQPYYEVPIAHHLEQSNYEPSWKTYA 300
           LYRMHEQYPYLQHLH+ QIQSHENIASRISCQNRKQPYYEVPIAHHLEQSNYEPSWKTYA
Sbjct: 241 LYRMHEQYPYLQHLHKHQIQSHENIASRISCQNRKQPYYEVPIAHHLEQSNYEPSWKTYA 300

Query: 301 FHRGSNQFSPVFPSHYMDTIQ 321
           F RGSNQFSPVFPSHYMDTIQ
Sbjct: 301 FQRGSNQFSPVFPSHYMDTIQ 321

[Close]

BLAST of Cp4.1LG18g02710 vs. ExPASy TrEMBL
Match: A0A6J1JJA7 (pumilio homolog 12-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484953 PE=4 SV=1)

HSP 1 Score: 642 bits (1656), Expect = 2.51e-226
Identity = 309/322 (95.96%), Postives = 313/322 (97.20%), Query Frame = 0


Query: 1   MEEMGNELEFADLARLIGDEFPNVASGNAHNEEQGLFSVPVSSYEGPSVRNFDSNGNLMD 60
           MEEMGNELEFADLARLIGDEFPNVASGNAHNEEQGLFSVPVSSYEGPSVRNFD NGNLMD
Sbjct: 1   MEEMGNELEFADLARLIGDEFPNVASGNAHNEEQGLFSVPVSSYEGPSVRNFDGNGNLMD 60

Query: 61  GNISMSKLQQLSRQNSMPGDSSLTLAFEKLNFGDEAKGRAWKSLQQGHAVLLEDHYSENL 120
           GNISMSK QQLSRQNSMPGDSSLTLAFEKLNFGDE KGRAWKSLQQGHAVLLEDHYSENL
Sbjct: 61  GNISMSKFQQLSRQNSMPGDSSLTLAFEKLNFGDEVKGRAWKSLQQGHAVLLEDHYSENL 120

Query: 121 NKQLHIMDPSVLASWVSSNHLSNGVHSPHMTKFSHQNSPSRHIPEQYNKWQVGQLQSFET 180
           NKQLHIMDPSVLASW SSNHLSNGVH+PHMTKFSHQNSPSRHIPEQYNKWQVGQLQ FE 
Sbjct: 121 NKQLHIMDPSVLASWGSSNHLSNGVHNPHMTKFSHQNSPSRHIPEQYNKWQVGQLQYFEM 180

Query: 181 SSPAMPLTHEMSNVSSPNLQFPITPQMQQIFHNGRPPVRYIHPQQINHCQIGWNYAEEDK 240
           SSPAMPLTHEM+NVSSPNLQFPITPQMQQIFH+GRPPVRYIHPQQINHCQIGWNY EEDK
Sbjct: 181 SSPAMPLTHEMANVSSPNLQFPITPQMQQIFHDGRPPVRYIHPQQINHCQIGWNYTEEDK 240

Query: 241 LYRMHEQYPYLQHLHEQQIQSHENIASRISCQNRKQPYYEVPIAHHLEQSNYEPSWKTYA 300
           LYRMHEQYPYLQHLH+ QIQSHENIASRISCQNRKQPYYEVPIAHHLEQSNYEPSWKTYA
Sbjct: 241 LYRMHEQYPYLQHLHKHQIQSHENIASRISCQNRKQPYYEVPIAHHLEQSNYEPSWKTYA 300

Query: 301 FHRGSNQFSPVFPSHYMDTIQG 322
           F RGSNQFSPVFPSHYMDTIQG
Sbjct: 301 FQRGSNQFSPVFPSHYMDTIQG 322

[Close]

BLAST of Cp4.1LG18g02710 vs. ExPASy TrEMBL
Match: A0A6J1H9W2 (pumilio homolog 12-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111461817 PE=4 SV=1)

HSP 1 Score: 580 bits (1496), Expect = 1.76e-202
Identity = 286/322 (88.82%), Postives = 288/322 (89.44%), Query Frame = 0


Query: 1   MEEMGNELEFADLARLIGDEFPNVASGNAHNEEQGLFSVPVSSYEGPSVRNFDSNGNLMD 60
           MEEMGNELEFADLARLIGDEFPNVASGNAHNEEQGLFSVPVSSYEGPSV+NFDSNGNLMD
Sbjct: 1   MEEMGNELEFADLARLIGDEFPNVASGNAHNEEQGLFSVPVSSYEGPSVQNFDSNGNLMD 60

Query: 61  GNISMSKLQQLSRQNSMPGDSSLTLAFEKLNFGDEAKGRAWKSLQQGHAVLLEDHYSENL 120
           GNISMSKLQQLSRQNSMPGDSSLTLAFEKLNFGDEAKGRAWKSLQQGHAVLLEDHYSENL
Sbjct: 61  GNISMSKLQQLSRQNSMPGDSSLTLAFEKLNFGDEAKGRAWKSLQQGHAVLLEDHYSENL 120

Query: 121 NKQLHIMDPSVLASWVSSNHLSNGVHSPHMTKFSHQNSPSRHIPEQYNKWQVGQLQSFET 180
           NKQLHIMDPSVLASW SSNHLSNGVHSPHMTKFSHQNSPSRHIPEQYN W          
Sbjct: 121 NKQLHIMDPSVLASWGSSNHLSNGVHSPHMTKFSHQNSPSRHIPEQYNNW---------- 180

Query: 181 SSPAMPLTHEMSNVSSPNLQFPITPQMQQIFHNGRPPVRYIHPQQINHCQIGWNYAEEDK 240
                              QFP TPQMQQIFHNGRPPVRYIHPQQINHCQIGWNY EEDK
Sbjct: 181 -------------------QFPTTPQMQQIFHNGRPPVRYIHPQQINHCQIGWNYNEEDK 240

Query: 241 LYRMHEQYPYLQHLHEQQIQSHENIASRISCQNRKQPYYEVPIAHHLEQSNYEPSWKTYA 300
           LYRMHEQYPYLQHLH+QQIQSHENIASRISCQNRKQPYYEVPIAHHLEQSNYEPSWKT A
Sbjct: 241 LYRMHEQYPYLQHLHKQQIQSHENIASRISCQNRKQPYYEVPIAHHLEQSNYEPSWKTSA 293

Query: 301 FHRGSNQFSPVFPSHYMDTIQG 322
           FHRGSNQFSPVFPSHYMDTIQG
Sbjct: 301 FHRGSNQFSPVFPSHYMDTIQG 293

The following BLAST results are available for this feature:

BLAST of Cp4.1LG18g02710 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG18g02710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023516434.1	1.43e-235	100.00	pumilio homolog 12-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023516435.1 ...	[more]
KAG6590075.1	1.26e-231	98.14	Pumilio-like 12, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7023743.1	1.68e-229	97.52	Pumilio-like 12 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022961267.1	2.10e-229	97.51	pumilio homolog 12-like isoform X3 [Cucurbita moschata]	[more]
XP_022961257.1	4.80e-229	97.52	pumilio homolog 12-like isoform X1 [Cucurbita moschata] >XP_022961259.1 pumilio ...	[more]

BLAST of Cp4.1LG18g02710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H9Q7	1.01e-229	97.51	pumilio homolog 12-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111461817...	[more]
A0A6J1H9Q4	2.32e-229	97.52	pumilio homolog 12-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461817...	[more]
A0A6J1JIS0	1.11e-226	95.95	pumilio homolog 12-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111484953 P...	[more]
A0A6J1JJA7	2.51e-226	95.96	pumilio homolog 12-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484953 P...	[more]
A0A6J1H9W2	1.76e-202	88.82	pumilio homolog 12-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111461817...	[more]

BLAST of Cp4.1LG18g02710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR12537	RNA BINDING PROTEIN PUMILIO-RELATED	coord: 10..310
None	No IPR available	PANTHER	PTHR12537:SF147	PUMILIO HOMOLOG 12	coord: 10..310

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG18g02710.1	Cp4.1LG18g02710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006417	regulation of translation
molecular_function	GO:0003723	RNA binding