Cp4.1LG18g02700 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG18g02700
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	ruBisCO large subunit-binding protein subunit beta, chloroplastic-like
Location	Cp4.1LG18: 4326061 .. 4335083 (-)
RNA-Seq Expression	Cp4.1LG18g02700
Synteny	Cp4.1LG18g02700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAATGTTCTTGTTATTGATATCAATTTTCAACCAATTCAACACTTGGATAGTTGGTAAGGTAGTACTTGAATCCAGAAAAAATATATTTAATAATCAAATGGAGGAAGCATAAGCGAAAGAGACAGCGATGGGGAGAGGAAGAATGGTGGGAACACTATGTTCATGCGCACTAACAATAAAGCTTTTCTGAATCAAAAACAGTACAAAATGGAAGAATTCCTTTGAAATTTTGATGGGTTCTTTCCATTTTCCGCCATAGCCAAAAACCCAACAACCCCACATCAAGAACAACAACAACAACAACAATCCGCCATTTCTTCCTTTTCAAGCCATTTCTGTCATTTTCTTCTTTACCCTTTTGGTTTATTGGTTTCTGATTTCCTCTCTTTGTTTGATGATTTGGGTTGGTTCTTGTTTTGGCGATGGTGGGTCGCTGAGGTTGTGAGCGCGTTAGCCCTTTTTTTTTTTTCCCTCTTTTTGAGCTGCTTCAATGGGGAACTGCTGGTATCGATGGGTACCCACGGTTAATAGGGTCTCGTCTAATGCTAAATCAGGTAACACTCTGATATGAACTTATGGATTTTGATACTCTTATTGGTTATAATGATGAAACTCTGTTTTGTTCTTTTGATTATCCATGGTTCTTCTGGTTTTTGTTCTCTCTGTTCTTCATTTACCATGAAAACCATTTGTTCTTAGCAAAATCTCAAGAGATTTGTGAAGAAATCTGCTCGTTTATTTGCTTTGATCTGAAAAAAAGATGTAATGAGAGGAAAAATCTGTTTATCCACTCAGAAAGTGGAGATAATGTTGTGCAACAGTGGGAGTGGACATAGTGGGTTTGTTCTTATCACTGCTTAATGGTTCATAGTCAAATTTCACTTTTATGTTAGAATTTCTTAACCTATTGTCTCTTAATCTTAGTTTCTATTGGCTTTTGCTTTGTAATATCACCTTTTGTTCATTCAAATCATACTTTTTGGTGTTTGGTTTCTGAGAAATGATATCATGTTCTTCAGAGTCTCCAAAAGTTGATATCACATCACCTTATCAAAGGAACAATGAACACAATTTGCCTTCTAACCCGAAAGAAGTAGAAGATTTACGTCGTGACTCGGCCACTAATCCGCTCATTGCATTTACCTTCGACGAGCTGAAGTTAATCACCGAAAATTTTCGACAGGACCGTGTGCTGGGCGGAGGCGGGTTCGGAAGTGTTTATAAAGGGTTCATTACTGAGGATTTGAGAGAAGGAATTGTTCCACTTCCAGTGGCTGTTAAGGTTCATGATGGGTTTAATAGCTATCAAGGCCACAGGGAATGGCTGGTAGCTATCTGTTCTTCCTATTTTGTTGCTCATATTTGATTCCATGTGCTATCTCTAATCAAGATAGCTATTGTTTTCTAGGCAGAAGTCATATTTCTGGGGCAGCTTTCTCATCCAAATTTGGTTAAGTTGATCGGATATTGCTGCGAAGACGAGCATCGAGTACTTATTTACGAGTACATGGCTCGGGGGAGCGTCGAAAACAATTTGTTTTCAAGTAAGCAGCCAAGTAAACTCCGAGTTTTTCTTTGTCGACTCTTAGCTTCTTTGTTAGGATTGTGGTTTTTAGTTTCGAACGTTGCATATTATCGAACGAACACTTCATGTATCGGTTTCAAACCCTTTCGATTCGTCATAAGAACTCGGTTTTACTATTATAGAATTTTGTACTGTCTGAACTCGTTCTATCTTTCGAAGAATCGTCGTGGTATGCTATGTTGACATTCCATGACTGCAGGAGTGTTGCTTCCTTTGCCTTGGTCCATTAGAATGAAGATTGCCTTTGGTGCTGCAAAAGGACTAGCGTTTCTTCACGACGCAGAAAAGCCTGTTATCTATCGTGATTTTAAGACGTCGAATATTCTGCTTGATTCGGTTCGTTTTGTTCTTGTTTCTCTGTTTACTGAAGTCGAAACATATAGATTTTTCGAGTAGTCGTTCACGTGTACATCAATGGTTTGGTTCTGATTGGTTTAGTTCAACGACAGGACTATAATCCGAAGCTTTCGGACTTTGGTCTCGCAAAAGATGGACCAGTGGGCGACAAATCTCATGTCTCTACTCGTATAATGGGAACGTATGGATATGCTGCACCGGAATACATATTGACAGGTACGAGTTCTTGGCCTTTATTTTGTTTTCTGGTCGAATGTTTTGTCGAATGGTCGAGTTACTCTGGTGGCAACGTATTATGCATTTCTCTTTTCTGCTCAGGACACTTGACCCCTCGAAGCGATGTTTATAGCTATGGAGTTGTTCTTCTCGAACTACTCACGGGAAGAAAGTCACTGGACAAACTACGACCAGCTCGAGAGCAAAACCTTACAGATTGGGCTCTTCCTCTCCTAAAAGAGAAGAAAAAGCTGATGACCATCGTCGATCCGAGACTCGGAGGAGAATATCCCGTCAAAGGATTTCAGAAGGCAGCAATGCTGGCTTACCATTGCCTGAACAAGAACCCGAAAGCAAGGCCGTTGATGCGAGACATCGTCGACTCGTTGGAGCCGTTACAGGAAGTAAGTGATGAGGCCGTAATATCATCTGAAACAACCTCCTTACCTGTTGCCAATGAGACTACTTGACTAAGACAAGACATGGGAGCTTCAGCTACCTTTAGATGTGGAAGTTTTGTTTTATGATCAAATTATGTTTTAACTTTTAACCTTGCTAATACATTCTCACTGCTTGTAATACAAAATGTATTTGTAAATGTTACCTCGCTCGAGCCCCGAGTTCAAACCGCTCTTCCCTCGTTTAACACACCTCGAGCTCAAGTTTGAACCTCTCGAGTTCGAGTCTAAGTCCAAGTTTTGAAGGTTGGGTTTAGCTTCGCTTGTCTTACGTCTTTGCTACTTTCTTCGAAACCTTGCTTTTATAAGAAGGAGAACATTAATGGACACAACCACCAAGTTAAAGCGTCGGTTTTATCAATGATCATTCCTTGATTGGCTTGACTACAAAAACGTGCAAAGAGGAGCACTGAAGGGTGCAAAGAGGAGCACTGAAGGATACAACCAGTTGGAGATGTTGGGAAATCATAGTATATCCCTACGAGAGAGGGTGGGTATCTCGAGAGTTTTAGATGCCCCATTCGAGATTCTCATTATATCATATAATTTAGTAGATAAAAACGTCCGTTCGCATCTCAATCGTTGATAATTTAAAAAAAAAAAAAAAAGAAAGGTTCTAGAGTGTTCCAAAATAGGACAATGGAGGAAGCCAAATCCAACGGCTAACAATGGGTGGAAAGTTCAGGAGGCTACAAGATTGTTGGGTTCGTTTTGCTCTCATTTTCCTATCCATCCTTTTGGAATTTGCTATAAAGAAACCTACTTCTCTTGTTGCCTCGAAATCCACTTACTGTGTGTATTAACGCAGTTTCGCCTCACTCACAGCGCTCGCCTCTCACCCTCTTATCCAAACCAATCCCTTCTCCCTCTAAACCCTAAAACCCCTTTTCGCCTCCGCCGTTTTCTTGTAAGCTTCCTTATCTCTTTTCATTCTCTTGGATTTTCTTACCCTTTACACGTTAGTTCATGCCTGCATTTCTAGCTGGATTTTGTTTTTGATGTGTCTTGAGCTTTCTGGGTTTCAATTGTTCTTACAGATTTGTGTGCCAATTGTTCAATTCATTTGTATTTTTCATTTCATTTCTGGGTTTTGGATGTTCTTCCCCTTTGTTGCATGTATCTTTAGAGCTTGTTTTTGTGTATGCTTGCTGATTCATTTCTATTTTGTTTCATCTTCTAATTTCTTTTGGGTTTCATGATTGTTTAAGAATTTTGATGTTCTTGTGTTTGTTCATGTCATTTTGTTTCTGGGTGTTAATCTATCCAATCTTCCCTACATGGGTTTTGGGTTTGCTTCACTCTCCTGTGTGTAATTAAGGCTGTTCTTTGTTCATGCTTGCTGATTTAATTCTGCATTATCTCTGTGATTTTCGTACTTTCTTTGGTTTTTGAATGCTGTTTGAGAATTATGTGTAATTAAAGCTGTTCTTCGTTCATGCTTGCTGATTTAATTCTGCATTATCTCTGTGATTTTCGTACTTTTTTTGGTTTCTAAATGCTGTTTGAGAATTGTGTGTCAATTCCTGTGTTGATGATTTTGTTTTGTAATTTGTCTACTCGGGTTTTCAACCCTTGTTCTATTTGTTTGCAATTGATGTTATGAAGTTGTTTCGATTTGAACTAGTTAACGATGCCGATTACTTTCTGTTTTCGGTTTTAAATAGGGGAGATGGCTTCTACTTTCACAGCCATGTCTTCAGTTGGTACTCTTGCTGCACCTGGAAGCCGTGTTGTGGATAAAAAGCTTCTATCGTCTTCTGATAAGTTGACTTCTCGCACGTCCATTTCTTCATTTGCGCTCCCGAAAAGACAGAGCGTAGTTCTTAGAAGAAACCGTTCTTCCAAGATCTCTGCCATGGCGAAGGAGTTGCACTTCAACCAGGATGGTTCGGCTATTAAGAAATTACAGGTGAGCTCTAGTTGTTGCTCGTTTATTCAAATCTACTTGCAATGAAGCTATTTGAGTTTCTTTTATCGTTCTTGTAACGAGACGCCTCGTTGTTTCAGAATGGTGTGAACAAACTTGCAGACTTGGTCGGAGTTACTCTTGGTCCTAAAGGAAGAAATGTGGTTCTTGAGAGCAAGTATGGCTCCCCGAAAATTGTCAATGATGGTGTAACTGTTGCAAAAGAGGTATCCAACTCTGCATTTAGACTCCATATGAGATCCCACATCGGTTGAGGAGGAGAACAGGAGAACGAAGCATTCTTTATAAGGGTGTGGAAATCTCTCCCTAGCAGACGTGTTTTAAAAACCTCGAGGGAAAGCCCCAAAGAGGACAATATCTGCTAGCGGTGGGCTTGGGCCGTTACACTCCAACTTTCAAATTTATACTTGTTTCATTGTGTTTTTTGAACATTTTGTTGCTACCGATCGAAAACTTGACTTCACGGTATTTACATGCGCTGGCTAGGTTGAGTTGGAGGATCCAGTTGAGAACATTGGTGCTAAGCTAGTCAGACAAGCTGCTGCGAAGACCAACGACTTAGCTGGAGATGGAACGACAACTTCAGTTGTTTTGGCTCAGGGTCTTATTGCTGAAGGTGTCAAGGTATTCAGATTCAGAGTAGTGCTATGTTTAAGCATTCCCTCATGGATTTTTACTAACTGATCGGAACATATTTTAGGTCGTGGCAGCTGGAGCAAACCCTGTTCTTATCACAAGAGGCATTGAAAAAACGGCCAAAGCGCTGGTCTCTGAACTCAAAAAAATGTCGAAAGAGGTAAAAGTGCATGGTTTAACGACTCCCATCATTTGACGGTTGGATGAAATGTTTCTTAACAAGCAATTATATTCGTGAATGGTTAGGTTGAAGACAGCGAATTGGCCGATGTGGCTGCAGTTAGTGCTGGAAATAACTACGAAGTGGGTAACATGATAGCTGAAGCCATGAGCAAGGTAGGACGAAAGGGTGTGGTGACTCTTGAAGAGGGAAGGAGTGCCGATAACAGTCTCTATGTCGTCGAAGGAATGCAGTTTGACAGGGGTTATATCTCTCCTTATTTTGTCACCGATAGCGAGAAAATGGCCGTGGAATTCGATAATTGCAAGGTATATGCGATATTCCATTGAATCATTTCATGATTGGCCGTAAGTCTTCGTGTTTTCGTGTCTTCTAACCTTCTGTACTATGTGAACAGCTGCTTCTTGTTGACAAAAAGATCACTAATGCAAGGGATCTTATTAACATACTGGAAGAGGCCATCAGAGGTGGCTATCCCGTTTTGATAATGGCCGAGGATATCGAGCAAGAAGCTCTGGCAACTCTTGTAGTAAACAAACTGAGAGGATCTTTGAAGATCGCTGCACTTAAAGCTCCAGGGTTTGGCGAGCGCAAGAGCCAGTACCTTGACGACATTGCTATTCTTACTGGAGGTCTTCTCTCTTCTTCATTCATTCCCTTAATGAAGGAAGCGTAAGTTATCGATGTTTTTCTGGGTTGTTATTGATTTTCTTTTTCGGGTTATACAGCCACGGTTATCAGAGAGGAGGTCGGGCTTTCCTTAGACAAAGCTGGAAAGGAGGTACTTGGAACTGCATCCAAGGTCGTGCTTACCAAAGATACCACGACAATTGTTGGCGACGGTAGCACCCAAGACGCAGTTTCTAAGCGTGTTGCACAGATTAAAACTCTGATTGAGGTAGACATAGTGATATTTTAAGTTTATTTTATTGTTTTTGCTCGAAGTTTTTCACGTCACGCTCGAGCCGACTGAACTGGATACTGGTTTTGTCGTAATTATGTAGGCTGCAGACCAGGACTACGAGAAAGAGAAACTTAACGAGAGAATTGCCAAACTTTCTGGTGGTGTAGCAGTTATACAGGTAAATTTAGTTTCCGTAGTGTATCAGCTTGTTCTACGAACTATGCGTCTATACATGTTTGTGACGTTTTGCCAATTCATGAAGGTTGGAGCACAAACCGAGACCGAACTCAAGGAAAAGAAACTGAGAGTTGAAGACGCTCTTAACGCTACGAAGGTACTGTTTAATATGCTGTGTCTTTCTAAAATGGCTGTATTAGCTAAGAATCGACGAAGTAACGGCTTCGACCATGGAACGATTATTACTTTTCATGGTTGAATGGATTTGGGTTAATGTCGAAAATTTGAAACGATTTGCAGGCAGCTGTTGAGGAAGGTATTGTTGTTGGCGGTGGTTGCACCCTCCTTAGACTCGCATCGAAGGTCGACGCGATCAAGTTATCCTTTGAAAATGATGAAGAGAAGGTAACCTGTCTAGTGAAATTGTGTTCCATTAACTAGGCCACACTATACGATGGGTGGTACTTGATAAGTTTGTCATGTCTGTTCTTTACCATGTACTGTTGGTTCTTTTTAAATGTCTGGTTCGATGGCAGGTCGGAGCCGACATTGTCAAGAGAGCATTAGCTTATCCCCTCAAGCTGATAGCGAAGAACGCCGGTGTCAACGGTAGCGTTGTTAGCGAGAAGGTATATATGATTACAGTGCAACTGTTCGTTCTATCTCTCTGTCGTTCGTTGTCGTGGTTGTACGAAATTGTTGAGGTTTTTGTTTCTTTATCAGGTGTTGTCCAGTGACAACTTTAGATATGGATACAATGCAGCAACTGGGAATTATGAAGACCTTATGGCTGCTGGAATCATCGATCCAACCAAGGTGAGCATCGACCGATCCTTTTCATTGGACACGTTAAAATAGGATAATGTTTGTTTTTATTGGGTGAAAAAACGAGCCCGAGACCGAGGCTAGCTACAGAAAGGGGACCTCAATCCAACAAAGCAAACTAAGCTCATAGTTGCAACAATGCCTTGTTGTGAGATCCCATGAGCCATTCCTTATAAGGGTGTGAAAACCTCTCCCTAGTGAGGCTGATGCTGATACATAACAGGTTAAAGCGGACAATATTTACTAGTTGTGAGCTTGGACTGTTACAAATGGTATTAGAGTCGAACACCGGACAGTTTTCCAGCAAAGATGCTGGGCCTCGAAAGGGGGTGAATTGTAAGATTTGGACTGTTACAAATGGTATTAGAGCCGAACACCAGACAGTTTTCCAGCAAAGATGCTGGGCCTCGAAAGGGGGTGAATTGTAAGATTTGGACTGTTACAAATGGTATTAGAGCCGAACACCAGACAGTTTTCCAGCAAAGATGCTGGGCCTCGAAAGGGGGTGAATTGTAAGATTTGGACTGTTACAAATGGTATTAGAGCCGAACACCAGACAGTTTTCCAGCAAAGATGCTGGGCCTCGAAAGGGGGTGAATTGTAAGATTTGGACTGTTACAAATGGTATTAGAGCCGAACACCAGACAGTTTTCCAGCAAAGATGCTGGGCCTCGAAAGGGGGTGAATTGTAAGATTTGGACTGTTACAAATGGTATTAGAGCCGAACACCAGACAGTTTTCCAGCAAAGATGCTGGGCCTCGAAAGGGGGTGAATTGTAAGATCTCACATCGGTTGGAGAGAGAAATGAAACATTACAAGGGTGTGAAAACCTCTCCCTAGTACAGAAGTGTTTTAAAACCGTGAGGTTGATGGCGATGGGCGAAAGCAGATAACATCTGTTAGTAGTGGGTTTGGGCTGTTACAAATAGTATCAGAGCCAGACACCGGGCGGTGTGGATTGTGAAAACCTCTCCCCAGTGGAAGTATTTTAAAACCGTGAGGTTGATGGCAATGGGCCATAGTAGAAAATATTTGTTAGGAGTGAGTTTGGGCTGTTACAAATGGTATCAGGGCCGCCAGACACTGGCGGTTACAAATGGTATCAGAGCCAGACATTGGGCAGTGTGGATTGTGAGATCCCACATCGGTTGGAGAGGGAAATGGGCCAAAGCGGACAACATTTGTTAGTGGTGGGCTTGGGCGGTTACCATTTCTGACCTCCCAAACCTCATCGGACTGCATCACGTGTTTAAAAATCTTATTAATAGAGTAGTATGGTGTATGTATGTGTGAAGTGGGGGATGTGTGTTTATGTTTGTTCAGGTGGTTAGATGCTGCTTAGAACATGCAGCTTCAGTGGCGAAGACATTCTTGATGTCGGACTGTGTGGTGGTGGAGATCAAGGAGCCTGAGCCAGTTGCTGCCGGCAATCCCATGGACAATTCAGGGTATGGGTACTGATGAGAGTAGCAGTCAAAAGAGGAAGAGAGTAATAATGAAGGGAGGCAGCGATGAATGGTGTTAAAAAGAGAGGCCATTTTTCATGTTTATTTTTGTAGATTCAGCCATTTCTTTGCCCTAAAGAGAGAGTCCTTAGAAGAAAATATGAAAGCATTGAAACAACATTAGAACCTTCTTTTGTGGAATTTTAATGATTCAGACCATATTATTCTTCTCTTTAACTTCTTTCTCTCTCTCTTCTCCCATGTTCAAAACTATCATTTGCTTTCAAAAAATGGTGACTTTTGGTGCAAA

mRNA sequence

GAATGTTCTTGTTATTGATATCAATTTTCAACCAATTCAACACTTGGATAGTTGGTAAGGTAGTACTTGAATCCAGAAAAAATATATTTAATAATCAAATGGAGGAAGCATAAGCGAAAGAGACAGCGATGGGGAGAGGAAGAATGGTGGGAACACTATGTTCATGCGCACTAACAATAAAGCTTTTCTGAATCAAAAACAGTACAAAATGGAAGAATTCCTTTGAAATTTTGATGGGTTCTTTCCATTTTCCGCCATAGCCAAAAACCCAACAACCCCACATCAAGAACAACAACAACAACAACAATCCGCCATTTCTTCCTTTTCAAGCCATTTCTGTCATTTTCTTCTTTACCCTTTTGGTTTATTGGTTTCTGATTTCCTCTCTTTGTTTGATGATTTGGGTTGGTTCTTGTTTTGGCGATGGTGGGTCGCTGAGGTTGTGAGCGCGTTAGCCCTTTTTTTTTTTTCCCTCTTTTTGAGCTGCTTCAATGGGGAACTGCTGGTATCGATGGGTACCCACGGTTAATAGGGTCTCGTCTAATGCTAAATCAGAGTCTCCAAAAGTTGATATCACATCACCTTATCAAAGGAACAATGAACACAATTTGCCTTCTAACCCGAAAGAAGTAGAAGATTTACGTCGTGACTCGGCCACTAATCCGCTCATTGCATTTACCTTCGACGAGCTGAAGTTAATCACCGAAAATTTTCGACAGGACCGTGTGCTGGGCGGAGGCGGGTTCGGAAGTGTTTATAAAGGGTTCATTACTGAGGATTTGAGAGAAGGAATTGTTCCACTTCCAGTGGCTGTTAAGGTTCATGATGGGTTTAATAGCTATCAAGGCCACAGGGAATGGCTGGCAGAAGTCATATTTCTGGGGCAGCTTTCTCATCCAAATTTGGTTAAGTTGATCGGATATTGCTGCGAAGACGAGCATCGAGTACTTATTTACGAGTACATGGCTCGGGGGAGCGTCGAAAACAATTTGTTTTCAAGTAAGCAGCCAAGAGTGTTGCTTCCTTTGCCTTGGTCCATTAGAATGAAGATTGCCTTTGGTGCTGCAAAAGGACTAGCGTTTCTTCACGACGCAGAAAAGCCTGTTATCTATCGTGATTTTAAGACGTCGAATATTCTGCTTGATTCGGACTATAATCCGAAGCTTTCGGACTTTGGTCTCGCAAAAGATGGACCAGTGGGCGACAAATCTCATGTCTCTACTCGTATAATGGGAACGTATGGATATGCTGCACCGGAATACATATTGACAGAAGGCAGCAATGCTGGCTTACCATTGCCTGAACAAGAACCCGAAAGCAAGGCCGTTGATGCGAGACATCGTCGACTCGTTGGAGCCGTTACAGGAAGGGAGATGGCTTCTACTTTCACAGCCATGTCTTCAGTTGGTACTCTTGCTGCACCTGGAAGCCGTGTTGTGGATAAAAAGCTTCTATCGTCTTCTGATAAGTTGACTTCTCGCACGTCCATTTCTTCATTTGCGCTCCCGAAAAGACAGAGCGTAGTTCTTAGAAGAAACCGTTCTTCCAAGATCTCTGCCATGGCGAAGGAGTTGCACTTCAACCAGGATGGTTCGGCTATTAAGAAATTACAGAATGGTGTGAACAAACTTGCAGACTTGGTCGGAGTTACTCTTGGTCCTAAAGGAAGAAATGTGGTTGAGTTGGAGGATCCAGTTGAGAACATTGGTGCTAAGCTAGTCAGACAAGCTGCTGCGAAGACCAACGACTTAGCTGGAGATGGAACGACAACTTCAGTTGTTTTGGCTCAGGGTCTTATTGCTGAAGGTGTCAAGGTCGTGGCAGCTGGAGCAAACCCTGTTCTTATCACAAGAGGCATTGAAAAAACGGCCAAAGCGCTGGTCTCTGAACTCAAAAAAATGTCGAAAGAGGTTGAAGACAGCGAATTGGCCGATGTGGCTGCAGTTAGTGCTGGAAATAACTACGAAGTGGGTAACATGATAGCTGAAGCCATGAGCAAGGTAGGACGAAAGGGTGTGGTGACTCTTGAAGAGGGAAGGAGTGCCGATAACAGTCTCTATGTCGTCGAAGGAATGCAGTTTGACAGGGGTTATATCTCTCCTTATTTTGTCACCGATAGCGAGAAAATGGCCGTGGAATTCGATAATTGCAAGCTGCTTCTTGTTGACAAAAAGATCACTAATGCAAGGGATCTTATTAACATACTGGAAGAGGCCATCAGAGGTGGCTATCCCGTTTTGATAATGGCCGAGGATATCGAGCAAGAAGCTCTGGCAACTCTTGTAGTAAACAAACTGAGAGGATCTTTGAAGATCGCTGCACTTAAAGCTCCAGGGTTTGGCGAGCGCAAGAGCCAGTACCTTGACGACATTGCTATTCTTACTGGAGCCACGGTTATCAGAGAGGAGGTCGGGCTTTCCTTAGACAAAGCTGGAAAGGAGGTACTTGGAACTGCATCCAAGGTCGTGCTTACCAAAGATACCACGACAATTGTTGGCGACGGTAGCACCCAAGACGCAGTTTCTAAGCGTGTTGCACAGATTAAAACTCTGATTGAGGCTGCAGACCAGGACTACGAGAAAGAGAAACTTAACGAGAGAATTGCCAAACTTTCTGGTGGTGTAGCAGTTATACAGGTTGGAGCACAAACCGAGACCGAACTCAAGGAAAAGAAACTGAGAGTTGAAGACGCTCTTAACGCTACGAAGGCAGCTGTTGAGGAAGGTATTGTTGTTGGCGGTGGTTGCACCCTCCTTAGACTCGCATCGAAGGTCGACGCGATCAAGTTATCCTTTGAAAATGATGAAGAGAAGGTCGGAGCCGACATTGTCAAGAGAGCATTAGCTTATCCCCTCAAGCTGATAGCGAAGAACGCCGGTGTCAACGGTAGCGTTGTTAGCGAGAAGGTGTTGTCCAGTGACAACTTTAGATATGGATACAATGCAGCAACTGGGAATTATGAAGACCTTATGGCTGCTGGAATCATCGATCCAACCAAGGTGGTTAGATGCTGCTTAGAACATGCAGCTTCAGTGGCGAAGACATTCTTGATGTCGGACTGTGTGGTGGTGGAGATCAAGGAGCCTGAGCCAGTTGCTGCCGGCAATCCCATGGACAATTCAGGGTATGGGTACTGATGAGAGTAGCAGTCAAAAGAGGAAGAGAGTAATAATGAAGGGAGGCAGCGATGAATGGTGTTAAAAAGAGAGGCCATTTTTCATGTTTATTTTTGTAGATTCAGCCATTTCTTTGCCCTAAAGAGAGAGTCCTTAGAAGAAAATATGAAAGCATTGAAACAACATTAGAACCTTCTTTTGTGGAATTTTAATGATTCAGACCATATTATTCTTCTCTTTAACTTCTTTCTCTCTCTCTTCTCCCATGTTCAAAACTATCATTTGCTTTCAAAAAATGGTGACTTTTGGTGCAAA

Coding sequence (CDS)

ATGGGGAACTGCTGGTATCGATGGGTACCCACGGTTAATAGGGTCTCGTCTAATGCTAAATCAGAGTCTCCAAAAGTTGATATCACATCACCTTATCAAAGGAACAATGAACACAATTTGCCTTCTAACCCGAAAGAAGTAGAAGATTTACGTCGTGACTCGGCCACTAATCCGCTCATTGCATTTACCTTCGACGAGCTGAAGTTAATCACCGAAAATTTTCGACAGGACCGTGTGCTGGGCGGAGGCGGGTTCGGAAGTGTTTATAAAGGGTTCATTACTGAGGATTTGAGAGAAGGAATTGTTCCACTTCCAGTGGCTGTTAAGGTTCATGATGGGTTTAATAGCTATCAAGGCCACAGGGAATGGCTGGCAGAAGTCATATTTCTGGGGCAGCTTTCTCATCCAAATTTGGTTAAGTTGATCGGATATTGCTGCGAAGACGAGCATCGAGTACTTATTTACGAGTACATGGCTCGGGGGAGCGTCGAAAACAATTTGTTTTCAAGTAAGCAGCCAAGAGTGTTGCTTCCTTTGCCTTGGTCCATTAGAATGAAGATTGCCTTTGGTGCTGCAAAAGGACTAGCGTTTCTTCACGACGCAGAAAAGCCTGTTATCTATCGTGATTTTAAGACGTCGAATATTCTGCTTGATTCGGACTATAATCCGAAGCTTTCGGACTTTGGTCTCGCAAAAGATGGACCAGTGGGCGACAAATCTCATGTCTCTACTCGTATAATGGGAACGTATGGATATGCTGCACCGGAATACATATTGACAGAAGGCAGCAATGCTGGCTTACCATTGCCTGAACAAGAACCCGAAAGCAAGGCCGTTGATGCGAGACATCGTCGACTCGTTGGAGCCGTTACAGGAAGGGAGATGGCTTCTACTTTCACAGCCATGTCTTCAGTTGGTACTCTTGCTGCACCTGGAAGCCGTGTTGTGGATAAAAAGCTTCTATCGTCTTCTGATAAGTTGACTTCTCGCACGTCCATTTCTTCATTTGCGCTCCCGAAAAGACAGAGCGTAGTTCTTAGAAGAAACCGTTCTTCCAAGATCTCTGCCATGGCGAAGGAGTTGCACTTCAACCAGGATGGTTCGGCTATTAAGAAATTACAGAATGGTGTGAACAAACTTGCAGACTTGGTCGGAGTTACTCTTGGTCCTAAAGGAAGAAATGTGGTTGAGTTGGAGGATCCAGTTGAGAACATTGGTGCTAAGCTAGTCAGACAAGCTGCTGCGAAGACCAACGACTTAGCTGGAGATGGAACGACAACTTCAGTTGTTTTGGCTCAGGGTCTTATTGCTGAAGGTGTCAAGGTCGTGGCAGCTGGAGCAAACCCTGTTCTTATCACAAGAGGCATTGAAAAAACGGCCAAAGCGCTGGTCTCTGAACTCAAAAAAATGTCGAAAGAGGTTGAAGACAGCGAATTGGCCGATGTGGCTGCAGTTAGTGCTGGAAATAACTACGAAGTGGGTAACATGATAGCTGAAGCCATGAGCAAGGTAGGACGAAAGGGTGTGGTGACTCTTGAAGAGGGAAGGAGTGCCGATAACAGTCTCTATGTCGTCGAAGGAATGCAGTTTGACAGGGGTTATATCTCTCCTTATTTTGTCACCGATAGCGAGAAAATGGCCGTGGAATTCGATAATTGCAAGCTGCTTCTTGTTGACAAAAAGATCACTAATGCAAGGGATCTTATTAACATACTGGAAGAGGCCATCAGAGGTGGCTATCCCGTTTTGATAATGGCCGAGGATATCGAGCAAGAAGCTCTGGCAACTCTTGTAGTAAACAAACTGAGAGGATCTTTGAAGATCGCTGCACTTAAAGCTCCAGGGTTTGGCGAGCGCAAGAGCCAGTACCTTGACGACATTGCTATTCTTACTGGAGCCACGGTTATCAGAGAGGAGGTCGGGCTTTCCTTAGACAAAGCTGGAAAGGAGGTACTTGGAACTGCATCCAAGGTCGTGCTTACCAAAGATACCACGACAATTGTTGGCGACGGTAGCACCCAAGACGCAGTTTCTAAGCGTGTTGCACAGATTAAAACTCTGATTGAGGCTGCAGACCAGGACTACGAGAAAGAGAAACTTAACGAGAGAATTGCCAAACTTTCTGGTGGTGTAGCAGTTATACAGGTTGGAGCACAAACCGAGACCGAACTCAAGGAAAAGAAACTGAGAGTTGAAGACGCTCTTAACGCTACGAAGGCAGCTGTTGAGGAAGGTATTGTTGTTGGCGGTGGTTGCACCCTCCTTAGACTCGCATCGAAGGTCGACGCGATCAAGTTATCCTTTGAAAATGATGAAGAGAAGGTCGGAGCCGACATTGTCAAGAGAGCATTAGCTTATCCCCTCAAGCTGATAGCGAAGAACGCCGGTGTCAACGGTAGCGTTGTTAGCGAGAAGGTGTTGTCCAGTGACAACTTTAGATATGGATACAATGCAGCAACTGGGAATTATGAAGACCTTATGGCTGCTGGAATCATCGATCCAACCAAGGTGGTTAGATGCTGCTTAGAACATGCAGCTTCAGTGGCGAAGACATTCTTGATGTCGGACTGTGTGGTGGTGGAGATCAAGGAGCCTGAGCCAGTTGCTGCCGGCAATCCCATGGACAATTCAGGGTATGGGTACTGA

Protein sequence

MGNCWYRWVPTVNRVSSNAKSESPKVDITSPYQRNNEHNLPSNPKEVEDLRRDSATNPLIAFTFDELKLITENFRQDRVLGGGGFGSVYKGFITEDLREGIVPLPVAVKVHDGFNSYQGHREWLAEVIFLGQLSHPNLVKLIGYCCEDEHRVLIYEYMARGSVENNLFSSKQPRVLLPLPWSIRMKIAFGAAKGLAFLHDAEKPVIYRDFKTSNILLDSDYNPKLSDFGLAKDGPVGDKSHVSTRIMGTYGYAAPEYILTEGSNAGLPLPEQEPESKAVDARHRRLVGAVTGREMASTFTAMSSVGTLAAPGSRVVDKKLLSSSDKLTSRTSISSFALPKRQSVVLRRNRSSKISAMAKELHFNQDGSAIKKLQNGVNKLADLVGVTLGPKGRNVVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTAKALVSELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEEGRSADNSLYVVEGMQFDRGYISPYFVTDSEKMAVEFDNCKLLLVDKKITNARDLINILEEAIRGGYPVLIMAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGATVIREEVGLSLDKAGKEVLGTASKVVLTKDTTTIVGDGSTQDAVSKRVAQIKTLIEAADQDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIKLSFENDEEKVGADIVKRALAYPLKLIAKNAGVNGSVVSEKVLSSDNFRYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVAAGNPMDNSGYGY

Homology

[Close]

BLAST of Cp4.1LG18g02700 vs. ExPASy Swiss-Prot
Match: P21240 (Chaperonin 60 subunit beta 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CPN60B1 PE=1 SV=3)

HSP 1 Score: 941.0 bits (2431), Expect = 9.5e-273
Identity = 510/609 (83.74%), Postives = 543/609 (89.16%), Query Frame = 0


Query: 295 MASTFTAMSSVGTLAAPGSRVVDKKLLSSSDKLTSRTSISSFALPKRQSVVLR-RNRSSK 354
           MASTFTA SS+G++ AP     DKKL+S          +SS +  +RQSV  R R  SS 
Sbjct: 1   MASTFTATSSIGSMVAPNGHKSDKKLIS---------KLSSSSFGRRQSVCPRPRRSSSA 60

Query: 355 ISAMAKELHFNQDGSAIKKLQNGVNKLADLVGVTLGPKGRNV------------------ 414
           I   AKELHFN+DG+ I++LQ GVNKLADLVGVTLGPKGRNV                  
Sbjct: 61  IVCAAKELHFNKDGTTIRRLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTV 120

Query: 415 ---VELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLI 474
              VELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQG IAEGVKVVAAGANPVLI
Sbjct: 121 AREVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLI 180

Query: 475 TRGIEKTAKALVSELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTL 534
           TRGIEKTAKALV+ELKKMSKEVEDSELADVAAVSAGNN E+GNMIAEAMSKVGRKGVVTL
Sbjct: 181 TRGIEKTAKALVTELKKMSKEVEDSELADVAAVSAGNNDEIGNMIAEAMSKVGRKGVVTL 240

Query: 535 EEGRSADNSLYVVEGMQFDRGYISPYFVTDSEKMAVEFDNCKLLLVDKKITNARDLINIL 594
           EEG+SA+N+LYVVEGMQFDRGYISPYFVTDSEKM+VEFDNCKLLLVDKKITNARDL+ +L
Sbjct: 241 EEGKSAENNLYVVEGMQFDRGYISPYFVTDSEKMSVEFDNCKLLLVDKKITNARDLVGVL 300

Query: 595 EEAIRGGYPVLIMAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTG 654
           E+AIRGGYP+LI+AEDIEQEALATLVVNKLRG+LKIAAL+APGFGERKSQYLDDIAILTG
Sbjct: 301 EDAIRGGYPILIIAEDIEQEALATLVVNKLRGTLKIAALRAPGFGERKSQYLDDIAILTG 360

Query: 655 ATVIREEVGLSLDKAGKEVLGTASKVVLTKDTTTIVGDGSTQDAVSKRVAQIKTLIEAAD 714
           ATVIREEVGLSLDKAGKEVLG ASKVVLTK+T+TIVGDGSTQDAV KRV QIK LIE A+
Sbjct: 361 ATVIREEVGLSLDKAGKEVLGNASKVVLTKETSTIVGDGSTQDAVKKRVTQIKNLIEQAE 420

Query: 715 QDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGC 774
           QDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGC
Sbjct: 421 QDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGC 480

Query: 775 TLLRLASKVDAIKLSFENDEEKVGADIVKRALAYPLKLIAKNAGVNGSVVSEKVLSSDNF 834
           TLLRLASKVDAIK + +NDEEKVGADIVKRAL+YPLKLIAKNAGVNGSVVSEKVLS+DN 
Sbjct: 481 TLLRLASKVDAIKATLDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSNDNV 540

Query: 835 RYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVAAGN 882
           ++GYNAATG YEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPV  GN
Sbjct: 541 KFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPVGN 600

[Close]

BLAST of Cp4.1LG18g02700 vs. ExPASy Swiss-Prot
Match: Q9LJE4 (Chaperonin 60 subunit beta 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CPN60B2 PE=1 SV=1)

HSP 1 Score: 930.6 bits (2404), Expect = 1.3e-269
Identity = 504/608 (82.89%), Postives = 547/608 (89.97%), Query Frame = 0


Query: 295 MASTFTAMSSVGTLAAPGSRVVDKKLLSSSDKLTSRTSISSFALPKRQSVVLRRNRSSKI 354
           MASTFTA SS+G+L AP           ++ KL+S TSISS +  +R +V +RR+R + +
Sbjct: 1   MASTFTATSSLGSLLAP-----------NAIKLSSATSISSSSFGRRHNVCVRRSRPAIV 60

Query: 355 SAMAKELHFNQDGSAIKKLQNGVNKLADLVGVTLGPKGRNV------------------- 414
            A AKELHFN+DG+ I+KLQ GVNKLADLVGVTLGPKGRNV                   
Sbjct: 61  CA-AKELHFNKDGTTIRKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVA 120

Query: 415 --VELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT 474
             VELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQG IAEGVKVVAAGANPVLIT
Sbjct: 121 REVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLIT 180

Query: 475 RGIEKTAKALVSELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLE 534
           RGIEKTAKALV+ELK MSKEVEDSELADVAAVSAGNN+EVG+MIAEAMSKVGRKGVVTLE
Sbjct: 181 RGIEKTAKALVNELKLMSKEVEDSELADVAAVSAGNNHEVGSMIAEAMSKVGRKGVVTLE 240

Query: 535 EGRSADNSLYVVEGMQFDRGYISPYFVTDSEKMAVEFDNCKLLLVDKKITNARDLINILE 594
           EG+SA+N+LYVVEGMQFDRGYISPYFVTDSEKM+VE+DNCKLLLVDKK+TNARDL+ +LE
Sbjct: 241 EGKSAENNLYVVEGMQFDRGYISPYFVTDSEKMSVEYDNCKLLLVDKKVTNARDLVGVLE 300

Query: 595 EAIRGGYPVLIMAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGA 654
           +AIRGGYP+LI+AEDIEQEALATLVVNKLRG+LKIAALKAPGFGERKSQYLDDIAILTGA
Sbjct: 301 DAIRGGYPILIIAEDIEQEALATLVVNKLRGTLKIAALKAPGFGERKSQYLDDIAILTGA 360

Query: 655 TVIREEVGLSLDKAGKEVLGTASKVVLTKDTTTIVGDGSTQDAVSKRVAQIKTLIEAADQ 714
           TVIREEVGLSLDKAGKEVLG ASKVVLTK+ TTIVGDG+TQ+AV+KRV QI+ LIE A+Q
Sbjct: 361 TVIREEVGLSLDKAGKEVLGNASKVVLTKEMTTIVGDGTTQEAVNKRVVQIRNLIEQAEQ 420

Query: 715 DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT 774
           DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT
Sbjct: 421 DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT 480

Query: 775 LLRLASKVDAIKLSFENDEEKVGADIVKRALAYPLKLIAKNAGVNGSVVSEKVLSSDNFR 834
           LLRLASKVDAIK + ENDEEKVGA+IVKRAL+YPLKLIAKNAGVNGSVVSEKVL++DN +
Sbjct: 481 LLRLASKVDAIKDTLENDEEKVGAEIVKRALSYPLKLIAKNAGVNGSVVSEKVLANDNVK 540

Query: 835 YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVAAGNP 882
           +GYNAATG YEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEI EPEPV AGNP
Sbjct: 541 FGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIPEPEPVPAGNP 596

[Close]

BLAST of Cp4.1LG18g02700 vs. ExPASy Swiss-Prot
Match: P08927 (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Pisum sativum OX=3888 PE=1 SV=2)

HSP 1 Score: 920.6 bits (2378), Expect = 1.3e-266
Identity = 501/585 (85.64%), Postives = 534/585 (91.28%), Query Frame = 0


Query: 322 SSSDKLTSRTSISSFALP--KRQS---VVLRRNRSSKISAMAKELHFNQDGSAIKKLQNG 381
           +SS  L+S  +ISSF L   KR +   V+ R+NR+ K+SAMAKELHFN+DGSAIKKLQNG
Sbjct: 9   TSSCNLSSSAAISSFPLAAGKRNANKVVLPRKNRNVKVSAMAKELHFNKDGSAIKKLQNG 68

Query: 382 VNKLADLVGVTLGPKGRNV---------------------VELEDPVENIGAKLVRQAAA 441
           VNKLADLVGVTLGPKGRNV                     VELEDPVENIGAKLVRQAAA
Sbjct: 69  VNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAA 128

Query: 442 KTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTAKALVSELKKMSKEVE 501
           KTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKT+KALV+ELKKMSKEVE
Sbjct: 129 KTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTSKALVAELKKMSKEVE 188

Query: 502 DSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEEGRSADNSLYVVEGMQFDRGYI 561
           DSELADVAAVSAGNN+EVGNMIAEA+SKVGRKGVVTLEEG+SA+NSLYVVEGMQFDRGYI
Sbjct: 189 DSELADVAAVSAGNNHEVGNMIAEALSKVGRKGVVTLEEGKSAENSLYVVEGMQFDRGYI 248

Query: 562 SPYFVTDSEKMAVEFDNCKLLLVDKKITNARDLINILEEAIRGGYPVLIMAEDIEQEALA 621
           SPYFVTDSEKM VEF+NCKLLLVDKKITNARDLINILE+AIR G+P++I+AEDIEQEALA
Sbjct: 249 SPYFVTDSEKMTVEFENCKLLLVDKKITNARDLINILEDAIRSGFPIVIIAEDIEQEALA 308

Query: 622 TLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGATVIREEVGLSLDKAGKEVLGTA 681
           TLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTG TVIREEVGL+LDKA KEVLG A
Sbjct: 309 TLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGGTVIREEVGLTLDKADKEVLGNA 368

Query: 682 SKVVLTKDTTTIVGDGSTQDAVSKRVAQIKTLIEAADQDYEKEKLNERIAKLSGGVAVIQ 741
           +KVVLTKDTTTIVGDGSTQ+AV+KRV+QIK  IEAA+Q+YEKEKL+ERIAKLSGGVAVIQ
Sbjct: 369 AKVVLTKDTTTIVGDGSTQEAVNKRVSQIKNQIEAAEQEYEKEKLSERIAKLSGGVAVIQ 428

Query: 742 VGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIKLSFENDEEKV 801
           VGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIK +  NDEEKV
Sbjct: 429 VGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIKDTLANDEEKV 488

Query: 802 GADIVKRALAYPLKLIAKNAGVNGSVVSEKVLSSDNFRYGYNAATGNYEDLMAAGIIDPT 861
           GADIVKRAL+YPLKLIAKNAGVNGSVVSEKVLSSDN +YGYNAATG YEDLMAAGIIDPT
Sbjct: 489 GADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSSDNPKYGYNAATGKYEDLMAAGIIDPT 548

Query: 862 KVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVAAGNPMDNSGYG 881
           KVVRCCLEHA+SVAKTFLMSDCVVVEIKEPE    GNPMDNSGYG
Sbjct: 549 KVVRCCLEHASSVAKTFLMSDCVVVEIKEPESAPVGNPMDNSGYG 593

[Close]

BLAST of Cp4.1LG18g02700 vs. ExPASy Swiss-Prot
Match: P21241 (RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Brassica napus OX=3708 PE=2 SV=1)

HSP 1 Score: 909.8 bits (2350), Expect = 2.3e-263
Identity = 493/596 (82.72%), Postives = 533/596 (89.43%), Query Frame = 0


Query: 295 MASTFTAMSSVGTLAAPGSRVVDKKLLSSSDKLTSRTSISSFALPKRQSVVLRRNRSS-K 354
           MASTFTA SS+G++ AP +   DKKL++          +SS +  +RQ+V  +  RSS  
Sbjct: 1   MASTFTATSSIGSMVAPNAHKTDKKLMN---------KLSSSSFGRRQNVFPKLRRSSPA 60

Query: 355 ISAMAKELHFNQDGSAIKKLQNGVNKLADLVGVTLGPKGRNV------------------ 414
           +   AKELHFN+DG+ I+KLQ GVNKLADLVGVTLGPKGRNV                  
Sbjct: 61  VVCAAKELHFNKDGTTIRKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTV 120

Query: 415 ---VELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLI 474
              VELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQG IAEGVKVVAAGANPVLI
Sbjct: 121 AREVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLI 180

Query: 475 TRGIEKTAKALVSELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTL 534
           TRGIEKTAKALV+ELKKMSKEVEDSELADVAAVSAGNN E+G+MIAEAMS+VGRKGVVTL
Sbjct: 181 TRGIEKTAKALVAELKKMSKEVEDSELADVAAVSAGNNAEIGSMIAEAMSRVGRKGVVTL 240

Query: 535 EEGRSADNSLYVVEGMQFDRGYISPYFVTDSEKMAVEFDNCKLLLVDKKITNARDLINIL 594
           EEG+SA+N+LYVVEGMQFDRGY+SPYFVTDSEKM+VEFDNCKLLLVDKKITNARDL+ +L
Sbjct: 241 EEGKSAENALYVVEGMQFDRGYVSPYFVTDSEKMSVEFDNCKLLLVDKKITNARDLVGVL 300

Query: 595 EEAIRGGYPVLIMAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTG 654
           E+AIRGGYP+LI+AEDIEQEALATLVVNKLRG+LKIAALKAPGFGERKSQYLDDIAILTG
Sbjct: 301 EDAIRGGYPILIIAEDIEQEALATLVVNKLRGTLKIAALKAPGFGERKSQYLDDIAILTG 360

Query: 655 ATVIREEVGLSLDKAGKEVLGTASKVVLTKDTTTIVGDGSTQDAVSKRVAQIKTLIEAAD 714
           ATVIREEVGLSLDKAGKEVLG A+KVVLTK+T+TIVGDGSTQDAV KRV QIK LIE A+
Sbjct: 361 ATVIREEVGLSLDKAGKEVLGHAAKVVLTKETSTIVGDGSTQDAVQKRVTQIKNLIEQAE 420

Query: 715 QDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGC 774
           QDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGC
Sbjct: 421 QDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGC 480

Query: 775 TLLRLASKVDAIKLSFENDEEKVGADIVKRALAYPLKLIAKNAGVNGSVVSEKVLSSDNF 834
           TLLRLASKVDAIK + +NDEEKVGADIVKRAL+YPLKLIAKNAGVNGSVVSEKVLS+DN 
Sbjct: 481 TLLRLASKVDAIKAALDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSNDNV 540

Query: 835 RYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPV 869
           ++GYNAATG YEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPV
Sbjct: 541 KFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPV 587

[Close]

BLAST of Cp4.1LG18g02700 vs. ExPASy Swiss-Prot
Match: C0Z361 (Chaperonin 60 subunit beta 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CPN60B3 PE=1 SV=1)

HSP 1 Score: 906.7 bits (2342), Expect = 2.0e-262
Identity = 496/609 (81.44%), Postives = 536/609 (88.01%), Query Frame = 0


Query: 295 MASTFTAMSSVGTLAAPGSRVVDKKLLSSSDKLTSRTSISSFALPKRQSVVLRRNRSSKI 354
           MASTF+A SS+G+  AP            S++L+S  SISS +  + QS+  R+ R  KI
Sbjct: 1   MASTFSATSSMGSSLAP-----------PSNRLSSFVSISSSSFGRTQSIAQRKARFPKI 60

Query: 355 SAMAKELHFNQDGSAIKKLQNGVNKLADLVGVTLGPKGRNV------------------- 414
            A AK+LHFN+DG+AIKKLQ GVNKLADLVGVTLGPKGRNV                   
Sbjct: 61  YA-AKQLHFNKDGTAIKKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVA 120

Query: 415 --VELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT 474
             VELEDPVENIGAKLVRQAA+KTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT
Sbjct: 121 REVELEDPVENIGAKLVRQAASKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT 180

Query: 475 RGIEKTAKALVSELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLE 534
           RGIEKT KALV+ELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAM+KVGRKGVVTLE
Sbjct: 181 RGIEKTTKALVAELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMAKVGRKGVVTLE 240

Query: 535 EGRSADNSLYVVEGMQFDRGYISPYFVTDSEKMAVEFDNCKLLLVDKKITNARDLINILE 594
           EG+SA+NSLYVVEGMQFDRGYISPYFVTDSEKM  E++NCKL LVDKKITNARD+I+ILE
Sbjct: 241 EGKSAENSLYVVEGMQFDRGYISPYFVTDSEKMCAEYENCKLFLVDKKITNARDIISILE 300

Query: 595 EAIRGGYPVLIMAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGA 654
           +AI+GGYP+LI+AEDIEQE LATLVVNKLRG++K+AALKAPGFGERKSQYLDDIA LTGA
Sbjct: 301 DAIKGGYPLLIIAEDIEQEPLATLVVNKLRGTIKVAALKAPGFGERKSQYLDDIAALTGA 360

Query: 655 TVIREEVGLSLDKAGKEVLGTASKVVLTKDTTTIVGDGSTQDAVSKRVAQIKTLIEAADQ 714
           TVIREEVGL L+K G EVLG A KVVLTKDTTTIVGDGST++ V KRV QIK LIEAA+Q
Sbjct: 361 TVIREEVGLQLEKVGPEVLGNAGKVVLTKDTTTIVGDGSTEEVVKKRVEQIKNLIEAAEQ 420

Query: 715 DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT 774
           DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT
Sbjct: 421 DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT 480

Query: 775 LLRLASKVDAIKLSFENDEEKVGADIVKRALAYPLKLIAKNAGVNGSVVSEKVLSSDNFR 834
           LLRLASKVDAIK +  NDEEKVGADIVK+AL+YPLKLIAKNAGVNGSVVSEKVLSSDN +
Sbjct: 481 LLRLASKVDAIKETLANDEEKVGADIVKKALSYPLKLIAKNAGVNGSVVSEKVLSSDNPK 540

Query: 835 YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVA-AGN 882
           +GYNAATG YEDLMAAGIIDPTKVVRCCLEHA+SVAKTFLMSDCVVVEIKEPE  A AGN
Sbjct: 541 HGYNAATGKYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPESAAPAGN 597

[Close]

BLAST of Cp4.1LG18g02700 vs. NCBI nr
Match: KAG6590073.1 (hypothetical protein SDJN03_15496, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1440 bits (3728), Expect = 0.0
Identity = 793/941 (84.27%), Postives = 813/941 (86.40%), Query Frame = 0


Query: 21  SESPKVDITSPYQRNNEHNLPSNPKEVEDLRRDSATNPLIAFTFDELKLITENFRQDRVL 80
           SESPKVDITSPYQRNNEHNLPSNPKEVEDLRRDSATNPLIAFTFDELKLITENFRQDRVL
Sbjct: 6   SESPKVDITSPYQRNNEHNLPSNPKEVEDLRRDSATNPLIAFTFDELKLITENFRQDRVL 65

Query: 81  GGGGFGSVYKGFITEDLREGIVPLPVAVKVHDGFNSYQGHREWLAEVIFLGQLSHPNLVK 140
           GGGGFGSVYKGFITEDLREGIVPLPVAVKVHDGFNSYQGHREWLAEVIFLGQLSHPNLVK
Sbjct: 66  GGGGFGSVYKGFITEDLREGIVPLPVAVKVHDGFNSYQGHREWLAEVIFLGQLSHPNLVK 125

Query: 141 LIGYCCEDEHRVLIYEYMARGSVENNLFSSKQPRVLLPLPWSIRMKIAFGAAKGLAFLHD 200
           LIGYCCEDEHRVLIYEYMARGSVENNLFS    RVLLPLPWSIRMKIAFGAAKGLAFLHD
Sbjct: 126 LIGYCCEDEHRVLIYEYMARGSVENNLFS----RVLLPLPWSIRMKIAFGAAKGLAFLHD 185

Query: 201 AEKPVIYRDFKTSNILLDSDYNPKLSDFGLAKDGPVGDKSHVSTRIMGTYGYAAPEYILT 260
           AEKPVIYRDFKTSNILLDSDYNPKLSDFGLAKDGPVGDKSHVSTRIMGTYGYAAPEYILT
Sbjct: 186 AEKPVIYRDFKTSNILLDSDYNPKLSDFGLAKDGPVGDKSHVSTRIMGTYGYAAPEYILT 245

Query: 261 -------EGSNAGLPLPEQEPESKAVD----ARHRRLVG------------------AVT 320
                  +  + G+ L E     K++D    AR + L                     + 
Sbjct: 246 GHLTPRSDVYSYGVVLLELLTGRKSLDKLRPAREQNLTDWALPLLKEKKKLMTIVDPRLG 305

Query: 321 GREMASTF--TAMSSVGTLAA-PGSRVVDKKLLSSSDKLT----SRTSISSFALPKRQ-- 380
           G      F   AM +   L   P +R + + ++ S + L     +R++  S + P +   
Sbjct: 306 GEYPVKGFQKAAMLAYHCLNKNPKARPLMRDIVDSLEPLQEFRLTRSARLSPSYPNQSLL 365

Query: 381 ---------------------------SVVLRRNRSSKISAMAKELHFNQDGSAIKKLQN 440
                                      SVVLRRNRSSKISAMAKELHFNQDGSAIKKLQN
Sbjct: 366 PLNPKTPFRLRRFLGRWLLLSQPCLPLSVVLRRNRSSKISAMAKELHFNQDGSAIKKLQN 425

Query: 441 GVNKLADLVGVTLGPKGRNVV---------------ELEDPVENIGAKLVRQAAAKTNDL 500
           GVNKLADLVGVTLGPKGRNVV               ELEDPVENIGAKLVRQAAAKTNDL
Sbjct: 426 GVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVELEDPVENIGAKLVRQAAAKTNDL 485

Query: 501 AGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTAKALVSELKKMSKEVEDSELA 560
           AGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTAKALVSELK+MSKEVEDSELA
Sbjct: 486 AGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTAKALVSELKQMSKEVEDSELA 545

Query: 561 DVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEEGRSADNSLYVVEGMQFDRGYISPYFV 620
           DVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEEGRSADNSLYVVEGMQFDRGYISPYFV
Sbjct: 546 DVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEEGRSADNSLYVVEGMQFDRGYISPYFV 605

Query: 621 TDSEKMAVEFDNCKLLLVDKKITNARDLINILEEAIRGGYPVLIMAEDIEQEALATLVVN 680
           TDSEKMAVEFDNCKLLLVDKKITNARDLINILEEAIRGGYPVLIMAEDIEQEALATLVVN
Sbjct: 606 TDSEKMAVEFDNCKLLLVDKKITNARDLINILEEAIRGGYPVLIMAEDIEQEALATLVVN 665

Query: 681 KLRGSLKIAALKAPGFGERKSQYLDDIAILTGATVIREEVGLSLDKAGKEVLGTASKVVL 740
           KLRGSLKIAALKAPGFGERKSQYLDDIAILTGATVIREEVGLSLDKAGKEVLGTASKVVL
Sbjct: 666 KLRGSLKIAALKAPGFGERKSQYLDDIAILTGATVIREEVGLSLDKAGKEVLGTASKVVL 725

Query: 741 TKDTTTIVGDGSTQDAVSKRVAQIKTLIEAADQDYEKEKLNERIAKLSGGVAVIQVGAQT 800
           TKDTTTIVGDGSTQDAVSKRVAQIKTLIEAADQDYEKEKLNERIAKLSGGVAVIQVGAQT
Sbjct: 726 TKDTTTIVGDGSTQDAVSKRVAQIKTLIEAADQDYEKEKLNERIAKLSGGVAVIQVGAQT 785

Query: 801 ETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIKLSFENDEEKVGADIV 860
           ETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIK SFENDEEKVGADIV
Sbjct: 786 ETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIKESFENDEEKVGADIV 845

Query: 861 KRALAYPLKLIAKNAGVNGSVVSEKVLSSDNFRYGYNAATGNYEDLMAAGIIDPTKVVRC 881
           KRALAYPLKLIAKNAGVNGSVVSEKVLSSDNFRYGYNAATGNYEDLMAAGIIDPTKVVRC
Sbjct: 846 KRALAYPLKLIAKNAGVNGSVVSEKVLSSDNFRYGYNAATGNYEDLMAAGIIDPTKVVRC 905

[Close]

BLAST of Cp4.1LG18g02700 vs. NCBI nr
Match: XP_023515683.1 (ruBisCO large subunit-binding protein subunit beta, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023515684.1 ruBisCO large subunit-binding protein subunit beta, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1082 bits (2797), Expect = 0.0
Identity = 587/608 (96.55%), Postives = 587/608 (96.55%), Query Frame = 0


Query: 295 MASTFTAMSSVGTLAAPGSRVVDKKLLSSSDKLTSRTSISSFALPKRQSVVLRRNRSSKI 354
           MASTFTAMSSVGTLAAPGSRVVDKKLLSSSDKLTSRTSISSFALPKRQSVVLRRNRSSKI
Sbjct: 1   MASTFTAMSSVGTLAAPGSRVVDKKLLSSSDKLTSRTSISSFALPKRQSVVLRRNRSSKI 60

Query: 355 SAMAKELHFNQDGSAIKKLQNGVNKLADLVGVTLGPKGRNVV------------------ 414
           SAMAKELHFNQDGSAIKKLQNGVNKLADLVGVTLGPKGRNVV                  
Sbjct: 61  SAMAKELHFNQDGSAIKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVA 120

Query: 415 ---ELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT 474
              ELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT
Sbjct: 121 KEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT 180

Query: 475 RGIEKTAKALVSELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLE 534
           RGIEKTAKALVSELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLE
Sbjct: 181 RGIEKTAKALVSELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLE 240

Query: 535 EGRSADNSLYVVEGMQFDRGYISPYFVTDSEKMAVEFDNCKLLLVDKKITNARDLINILE 594
           EGRSADNSLYVVEGMQFDRGYISPYFVTDSEKMAVEFDNCKLLLVDKKITNARDLINILE
Sbjct: 241 EGRSADNSLYVVEGMQFDRGYISPYFVTDSEKMAVEFDNCKLLLVDKKITNARDLINILE 300

Query: 595 EAIRGGYPVLIMAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGA 654
           EAIRGGYPVLIMAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGA
Sbjct: 301 EAIRGGYPVLIMAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGA 360

Query: 655 TVIREEVGLSLDKAGKEVLGTASKVVLTKDTTTIVGDGSTQDAVSKRVAQIKTLIEAADQ 714
           TVIREEVGLSLDKAGKEVLGTASKVVLTKDTTTIVGDGSTQDAVSKRVAQIKTLIEAADQ
Sbjct: 361 TVIREEVGLSLDKAGKEVLGTASKVVLTKDTTTIVGDGSTQDAVSKRVAQIKTLIEAADQ 420

Query: 715 DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT 774
           DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT
Sbjct: 421 DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT 480

Query: 775 LLRLASKVDAIKLSFENDEEKVGADIVKRALAYPLKLIAKNAGVNGSVVSEKVLSSDNFR 834
           LLRLASKVDAIKLSFENDEEKVGADIVKRALAYPLKLIAKNAGVNGSVVSEKVLSSDNFR
Sbjct: 481 LLRLASKVDAIKLSFENDEEKVGADIVKRALAYPLKLIAKNAGVNGSVVSEKVLSSDNFR 540

Query: 835 YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVAAGNP 881
           YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVAAGNP
Sbjct: 541 YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVAAGNP 600

[Close]

BLAST of Cp4.1LG18g02700 vs. NCBI nr
Match: QBB73041.1 (ruBisCO large subunit-binding protein [Cucurbita pepo subsp. pepo] >QDE10506.1 ruBisCO2 [Cucurbita pepo])

HSP 1 Score: 1079 bits (2790), Expect = 0.0
Identity = 586/608 (96.38%), Postives = 586/608 (96.38%), Query Frame = 0


Query: 295 MASTFTAMSSVGTLAAPGSRVVDKKLLSSSDKLTSRTSISSFALPKRQSVVLRRNRSSKI 354
           MASTFTAMSSVGTLAAPGSRVVDKKLLSSSDKLTSRTSISSFALPKRQSVVLRRNRSSKI
Sbjct: 1   MASTFTAMSSVGTLAAPGSRVVDKKLLSSSDKLTSRTSISSFALPKRQSVVLRRNRSSKI 60

Query: 355 SAMAKELHFNQDGSAIKKLQNGVNKLADLVGVTLGPKGRNVV------------------ 414
           SAMAKELHFNQDGSAIKKLQNGVNKLADLVGVTLGPKGRNVV                  
Sbjct: 61  SAMAKELHFNQDGSAIKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVA 120

Query: 415 ---ELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT 474
              ELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT
Sbjct: 121 KEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT 180

Query: 475 RGIEKTAKALVSELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLE 534
           RGIEKTAKALVSELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLE
Sbjct: 181 RGIEKTAKALVSELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLE 240

Query: 535 EGRSADNSLYVVEGMQFDRGYISPYFVTDSEKMAVEFDNCKLLLVDKKITNARDLINILE 594
           EGRSADNSLYVVEGMQFDRGYISPYFVTDSEKMAVEFDNCKLLLVDKKITNARDLINILE
Sbjct: 241 EGRSADNSLYVVEGMQFDRGYISPYFVTDSEKMAVEFDNCKLLLVDKKITNARDLINILE 300

Query: 595 EAIRGGYPVLIMAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGA 654
           EAIRGGYPVLIMAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGA
Sbjct: 301 EAIRGGYPVLIMAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGA 360

Query: 655 TVIREEVGLSLDKAGKEVLGTASKVVLTKDTTTIVGDGSTQDAVSKRVAQIKTLIEAADQ 714
           TVIREEVGLSLDKAGKEVLGTASKVVLTKDTTTIVGDGSTQDAVSKRVAQIKTLIEAADQ
Sbjct: 361 TVIREEVGLSLDKAGKEVLGTASKVVLTKDTTTIVGDGSTQDAVSKRVAQIKTLIEAADQ 420

Query: 715 DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT 774
           DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT
Sbjct: 421 DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT 480

Query: 775 LLRLASKVDAIKLSFENDEEKVGADIVKRALAYPLKLIAKNAGVNGSVVSEKVLSSDNFR 834
           LLRLASKVDAIK SFENDEEKVGADIVKRALAYPLKLIAKNAGVNGSVVSEKVLSSDNFR
Sbjct: 481 LLRLASKVDAIKESFENDEEKVGADIVKRALAYPLKLIAKNAGVNGSVVSEKVLSSDNFR 540

Query: 835 YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVAAGNP 881
           YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVAAGNP
Sbjct: 541 YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVAAGNP 600

[Close]

BLAST of Cp4.1LG18g02700 vs. NCBI nr
Match: KAG7023741.1 (Chaperonin 60 subunit beta 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1077 bits (2786), Expect = 0.0
Identity = 585/608 (96.22%), Postives = 586/608 (96.38%), Query Frame = 0


Query: 295 MASTFTAMSSVGTLAAPGSRVVDKKLLSSSDKLTSRTSISSFALPKRQSVVLRRNRSSKI 354
           MASTFTAMSSVGTLAAPGSRVVDKKLLSSSDKLTSRTSISSFALPKRQSVVLRRNRSSKI
Sbjct: 1   MASTFTAMSSVGTLAAPGSRVVDKKLLSSSDKLTSRTSISSFALPKRQSVVLRRNRSSKI 60

Query: 355 SAMAKELHFNQDGSAIKKLQNGVNKLADLVGVTLGPKGRNVV------------------ 414
           SAMAKELHFNQDGSAIKKLQNGVNKLADLVGVTLGPKGRNVV                  
Sbjct: 61  SAMAKELHFNQDGSAIKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVA 120

Query: 415 ---ELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT 474
              ELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT
Sbjct: 121 KEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT 180

Query: 475 RGIEKTAKALVSELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLE 534
           RGIEKTAKALVSELK+MSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLE
Sbjct: 181 RGIEKTAKALVSELKQMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLE 240

Query: 535 EGRSADNSLYVVEGMQFDRGYISPYFVTDSEKMAVEFDNCKLLLVDKKITNARDLINILE 594
           EGRSADNSLYVVEGMQFDRGYISPYFVTDSEKMAVEFDNCKLLLVDKKITNARDLINILE
Sbjct: 241 EGRSADNSLYVVEGMQFDRGYISPYFVTDSEKMAVEFDNCKLLLVDKKITNARDLINILE 300

Query: 595 EAIRGGYPVLIMAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGA 654
           EAIRGGYPVLIMAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGA
Sbjct: 301 EAIRGGYPVLIMAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGA 360

Query: 655 TVIREEVGLSLDKAGKEVLGTASKVVLTKDTTTIVGDGSTQDAVSKRVAQIKTLIEAADQ 714
           TVIREEVGLSLDKAGKEVLGTASKVVLTKDTTTIVGDGSTQDAVSKRVAQIKTLIEAADQ
Sbjct: 361 TVIREEVGLSLDKAGKEVLGTASKVVLTKDTTTIVGDGSTQDAVSKRVAQIKTLIEAADQ 420

Query: 715 DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT 774
           DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT
Sbjct: 421 DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT 480

Query: 775 LLRLASKVDAIKLSFENDEEKVGADIVKRALAYPLKLIAKNAGVNGSVVSEKVLSSDNFR 834
           LLRLASKVDAIK SFENDEEKVGADIVKRALAYPLKLIAKNAGVNGSVVSEKVLSSDNFR
Sbjct: 481 LLRLASKVDAIKESFENDEEKVGADIVKRALAYPLKLIAKNAGVNGSVVSEKVLSSDNFR 540

Query: 835 YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVAAGNP 881
           YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVAAGNP
Sbjct: 541 YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVAAGNP 600

[Close]

BLAST of Cp4.1LG18g02700 vs. NCBI nr
Match: XP_022960757.1 (ruBisCO large subunit-binding protein subunit beta, chloroplastic-like [Cucurbita moschata] >XP_022960758.1 ruBisCO large subunit-binding protein subunit beta, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 1076 bits (2782), Expect = 0.0
Identity = 584/608 (96.05%), Postives = 585/608 (96.22%), Query Frame = 0


Query: 295 MASTFTAMSSVGTLAAPGSRVVDKKLLSSSDKLTSRTSISSFALPKRQSVVLRRNRSSKI 354
           MASTFTAMSSVGTLAAPGSRVVDKKLLSSSDKLTSRTSISSFALPKRQSVVLRRNRSSKI
Sbjct: 1   MASTFTAMSSVGTLAAPGSRVVDKKLLSSSDKLTSRTSISSFALPKRQSVVLRRNRSSKI 60

Query: 355 SAMAKELHFNQDGSAIKKLQNGVNKLADLVGVTLGPKGRNVV------------------ 414
           SAMAKELHFNQDGSAIKKLQNGVNKLADLVGVTLGPKGRNVV                  
Sbjct: 61  SAMAKELHFNQDGSAIKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVA 120

Query: 415 ---ELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT 474
              ELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT
Sbjct: 121 KEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT 180

Query: 475 RGIEKTAKALVSELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLE 534
           RGIEKTAKALVSELK+MSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLE
Sbjct: 181 RGIEKTAKALVSELKQMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLE 240

Query: 535 EGRSADNSLYVVEGMQFDRGYISPYFVTDSEKMAVEFDNCKLLLVDKKITNARDLINILE 594
           EGRSADNSLYVVEGMQFDRGYISPYFVTDSEKMAVEFDNCKLLLVDKKITNARDLINILE
Sbjct: 241 EGRSADNSLYVVEGMQFDRGYISPYFVTDSEKMAVEFDNCKLLLVDKKITNARDLINILE 300

Query: 595 EAIRGGYPVLIMAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGA 654
           EAIRGGYPVLIMAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTG 
Sbjct: 301 EAIRGGYPVLIMAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGG 360

Query: 655 TVIREEVGLSLDKAGKEVLGTASKVVLTKDTTTIVGDGSTQDAVSKRVAQIKTLIEAADQ 714
           TVIREEVGLSLDKAGKEVLGTASKVVLTKDTTTIVGDGSTQDAVSKRVAQIKTLIEAADQ
Sbjct: 361 TVIREEVGLSLDKAGKEVLGTASKVVLTKDTTTIVGDGSTQDAVSKRVAQIKTLIEAADQ 420

Query: 715 DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT 774
           DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT
Sbjct: 421 DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT 480

Query: 775 LLRLASKVDAIKLSFENDEEKVGADIVKRALAYPLKLIAKNAGVNGSVVSEKVLSSDNFR 834
           LLRLASKVDAIK SFENDEEKVGADIVKRALAYPLKLIAKNAGVNGSVVSEKVLSSDNFR
Sbjct: 481 LLRLASKVDAIKESFENDEEKVGADIVKRALAYPLKLIAKNAGVNGSVVSEKVLSSDNFR 540

Query: 835 YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVAAGNP 881
           YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVAAGNP
Sbjct: 541 YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVAAGNP 600

[Close]

BLAST of Cp4.1LG18g02700 vs. ExPASy TrEMBL
Match: A0A411HRF7 (RuBisCO large subunit-binding protein OS=Cucurbita pepo subsp. pepo OX=3664 PE=2 SV=1)

HSP 1 Score: 1079 bits (2790), Expect = 0.0
Identity = 586/608 (96.38%), Postives = 586/608 (96.38%), Query Frame = 0


Query: 295 MASTFTAMSSVGTLAAPGSRVVDKKLLSSSDKLTSRTSISSFALPKRQSVVLRRNRSSKI 354
           MASTFTAMSSVGTLAAPGSRVVDKKLLSSSDKLTSRTSISSFALPKRQSVVLRRNRSSKI
Sbjct: 1   MASTFTAMSSVGTLAAPGSRVVDKKLLSSSDKLTSRTSISSFALPKRQSVVLRRNRSSKI 60

Query: 355 SAMAKELHFNQDGSAIKKLQNGVNKLADLVGVTLGPKGRNVV------------------ 414
           SAMAKELHFNQDGSAIKKLQNGVNKLADLVGVTLGPKGRNVV                  
Sbjct: 61  SAMAKELHFNQDGSAIKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVA 120

Query: 415 ---ELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT 474
              ELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT
Sbjct: 121 KEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT 180

Query: 475 RGIEKTAKALVSELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLE 534
           RGIEKTAKALVSELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLE
Sbjct: 181 RGIEKTAKALVSELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLE 240

Query: 535 EGRSADNSLYVVEGMQFDRGYISPYFVTDSEKMAVEFDNCKLLLVDKKITNARDLINILE 594
           EGRSADNSLYVVEGMQFDRGYISPYFVTDSEKMAVEFDNCKLLLVDKKITNARDLINILE
Sbjct: 241 EGRSADNSLYVVEGMQFDRGYISPYFVTDSEKMAVEFDNCKLLLVDKKITNARDLINILE 300

Query: 595 EAIRGGYPVLIMAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGA 654
           EAIRGGYPVLIMAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGA
Sbjct: 301 EAIRGGYPVLIMAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGA 360

Query: 655 TVIREEVGLSLDKAGKEVLGTASKVVLTKDTTTIVGDGSTQDAVSKRVAQIKTLIEAADQ 714
           TVIREEVGLSLDKAGKEVLGTASKVVLTKDTTTIVGDGSTQDAVSKRVAQIKTLIEAADQ
Sbjct: 361 TVIREEVGLSLDKAGKEVLGTASKVVLTKDTTTIVGDGSTQDAVSKRVAQIKTLIEAADQ 420

Query: 715 DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT 774
           DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT
Sbjct: 421 DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT 480

Query: 775 LLRLASKVDAIKLSFENDEEKVGADIVKRALAYPLKLIAKNAGVNGSVVSEKVLSSDNFR 834
           LLRLASKVDAIK SFENDEEKVGADIVKRALAYPLKLIAKNAGVNGSVVSEKVLSSDNFR
Sbjct: 481 LLRLASKVDAIKESFENDEEKVGADIVKRALAYPLKLIAKNAGVNGSVVSEKVLSSDNFR 540

Query: 835 YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVAAGNP 881
           YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVAAGNP
Sbjct: 541 YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVAAGNP 600

[Close]

BLAST of Cp4.1LG18g02700 vs. ExPASy TrEMBL
Match: A0A4Y5WS44 (RuBisCO2 OS=Cucurbita pepo OX=3663 PE=2 SV=1)

HSP 1 Score: 1079 bits (2790), Expect = 0.0
Identity = 586/608 (96.38%), Postives = 586/608 (96.38%), Query Frame = 0


Query: 295 MASTFTAMSSVGTLAAPGSRVVDKKLLSSSDKLTSRTSISSFALPKRQSVVLRRNRSSKI 354
           MASTFTAMSSVGTLAAPGSRVVDKKLLSSSDKLTSRTSISSFALPKRQSVVLRRNRSSKI
Sbjct: 1   MASTFTAMSSVGTLAAPGSRVVDKKLLSSSDKLTSRTSISSFALPKRQSVVLRRNRSSKI 60

Query: 355 SAMAKELHFNQDGSAIKKLQNGVNKLADLVGVTLGPKGRNVV------------------ 414
           SAMAKELHFNQDGSAIKKLQNGVNKLADLVGVTLGPKGRNVV                  
Sbjct: 61  SAMAKELHFNQDGSAIKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVA 120

Query: 415 ---ELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT 474
              ELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT
Sbjct: 121 KEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT 180

Query: 475 RGIEKTAKALVSELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLE 534
           RGIEKTAKALVSELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLE
Sbjct: 181 RGIEKTAKALVSELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLE 240

Query: 535 EGRSADNSLYVVEGMQFDRGYISPYFVTDSEKMAVEFDNCKLLLVDKKITNARDLINILE 594
           EGRSADNSLYVVEGMQFDRGYISPYFVTDSEKMAVEFDNCKLLLVDKKITNARDLINILE
Sbjct: 241 EGRSADNSLYVVEGMQFDRGYISPYFVTDSEKMAVEFDNCKLLLVDKKITNARDLINILE 300

Query: 595 EAIRGGYPVLIMAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGA 654
           EAIRGGYPVLIMAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGA
Sbjct: 301 EAIRGGYPVLIMAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGA 360

Query: 655 TVIREEVGLSLDKAGKEVLGTASKVVLTKDTTTIVGDGSTQDAVSKRVAQIKTLIEAADQ 714
           TVIREEVGLSLDKAGKEVLGTASKVVLTKDTTTIVGDGSTQDAVSKRVAQIKTLIEAADQ
Sbjct: 361 TVIREEVGLSLDKAGKEVLGTASKVVLTKDTTTIVGDGSTQDAVSKRVAQIKTLIEAADQ 420

Query: 715 DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT 774
           DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT
Sbjct: 421 DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT 480

Query: 775 LLRLASKVDAIKLSFENDEEKVGADIVKRALAYPLKLIAKNAGVNGSVVSEKVLSSDNFR 834
           LLRLASKVDAIK SFENDEEKVGADIVKRALAYPLKLIAKNAGVNGSVVSEKVLSSDNFR
Sbjct: 481 LLRLASKVDAIKESFENDEEKVGADIVKRALAYPLKLIAKNAGVNGSVVSEKVLSSDNFR 540

Query: 835 YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVAAGNP 881
           YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVAAGNP
Sbjct: 541 YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVAAGNP 600

[Close]

BLAST of Cp4.1LG18g02700 vs. ExPASy TrEMBL
Match: A0A6J1H9X2 (ruBisCO large subunit-binding protein subunit beta, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111461463 PE=3 SV=1)

HSP 1 Score: 1076 bits (2782), Expect = 0.0
Identity = 584/608 (96.05%), Postives = 585/608 (96.22%), Query Frame = 0


Query: 295 MASTFTAMSSVGTLAAPGSRVVDKKLLSSSDKLTSRTSISSFALPKRQSVVLRRNRSSKI 354
           MASTFTAMSSVGTLAAPGSRVVDKKLLSSSDKLTSRTSISSFALPKRQSVVLRRNRSSKI
Sbjct: 1   MASTFTAMSSVGTLAAPGSRVVDKKLLSSSDKLTSRTSISSFALPKRQSVVLRRNRSSKI 60

Query: 355 SAMAKELHFNQDGSAIKKLQNGVNKLADLVGVTLGPKGRNVV------------------ 414
           SAMAKELHFNQDGSAIKKLQNGVNKLADLVGVTLGPKGRNVV                  
Sbjct: 61  SAMAKELHFNQDGSAIKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVA 120

Query: 415 ---ELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT 474
              ELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT
Sbjct: 121 KEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT 180

Query: 475 RGIEKTAKALVSELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLE 534
           RGIEKTAKALVSELK+MSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLE
Sbjct: 181 RGIEKTAKALVSELKQMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLE 240

Query: 535 EGRSADNSLYVVEGMQFDRGYISPYFVTDSEKMAVEFDNCKLLLVDKKITNARDLINILE 594
           EGRSADNSLYVVEGMQFDRGYISPYFVTDSEKMAVEFDNCKLLLVDKKITNARDLINILE
Sbjct: 241 EGRSADNSLYVVEGMQFDRGYISPYFVTDSEKMAVEFDNCKLLLVDKKITNARDLINILE 300

Query: 595 EAIRGGYPVLIMAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGA 654
           EAIRGGYPVLIMAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTG 
Sbjct: 301 EAIRGGYPVLIMAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGG 360

Query: 655 TVIREEVGLSLDKAGKEVLGTASKVVLTKDTTTIVGDGSTQDAVSKRVAQIKTLIEAADQ 714
           TVIREEVGLSLDKAGKEVLGTASKVVLTKDTTTIVGDGSTQDAVSKRVAQIKTLIEAADQ
Sbjct: 361 TVIREEVGLSLDKAGKEVLGTASKVVLTKDTTTIVGDGSTQDAVSKRVAQIKTLIEAADQ 420

Query: 715 DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT 774
           DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT
Sbjct: 421 DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT 480

Query: 775 LLRLASKVDAIKLSFENDEEKVGADIVKRALAYPLKLIAKNAGVNGSVVSEKVLSSDNFR 834
           LLRLASKVDAIK SFENDEEKVGADIVKRALAYPLKLIAKNAGVNGSVVSEKVLSSDNFR
Sbjct: 481 LLRLASKVDAIKESFENDEEKVGADIVKRALAYPLKLIAKNAGVNGSVVSEKVLSSDNFR 540

Query: 835 YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVAAGNP 881
           YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVAAGNP
Sbjct: 541 YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVAAGNP 600

[Close]

BLAST of Cp4.1LG18g02700 vs. ExPASy TrEMBL
Match: A0A6J1JIS5 (ruBisCO large subunit-binding protein subunit beta, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111484957 PE=3 SV=1)

HSP 1 Score: 1073 bits (2775), Expect = 0.0
Identity = 583/608 (95.89%), Postives = 584/608 (96.05%), Query Frame = 0


Query: 295 MASTFTAMSSVGTLAAPGSRVVDKKLLSSSDKLTSRTSISSFALPKRQSVVLRRNRSSKI 354
           MASTFTAMSSVGTLAAPGSRVVDKKLL SSDKLTSRTSISSFALPKRQSVVLRRNRSSKI
Sbjct: 1   MASTFTAMSSVGTLAAPGSRVVDKKLLLSSDKLTSRTSISSFALPKRQSVVLRRNRSSKI 60

Query: 355 SAMAKELHFNQDGSAIKKLQNGVNKLADLVGVTLGPKGRNVV------------------ 414
           SAMAKELHFN DGSAIKKLQNGVNKLADLVGVTLGPKGRNVV                  
Sbjct: 61  SAMAKELHFNHDGSAIKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVA 120

Query: 415 ---ELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT 474
              ELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT
Sbjct: 121 KEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT 180

Query: 475 RGIEKTAKALVSELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLE 534
           RGIEKTAKALVSELK+MSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLE
Sbjct: 181 RGIEKTAKALVSELKQMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLE 240

Query: 535 EGRSADNSLYVVEGMQFDRGYISPYFVTDSEKMAVEFDNCKLLLVDKKITNARDLINILE 594
           EGRSADNSLYVVEGMQFDRGYISPYFVTDSEKMAVEFDNCKLLLVDKKITNARDLINILE
Sbjct: 241 EGRSADNSLYVVEGMQFDRGYISPYFVTDSEKMAVEFDNCKLLLVDKKITNARDLINILE 300

Query: 595 EAIRGGYPVLIMAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGA 654
           EAIRGGYPVLIMAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGA
Sbjct: 301 EAIRGGYPVLIMAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGA 360

Query: 655 TVIREEVGLSLDKAGKEVLGTASKVVLTKDTTTIVGDGSTQDAVSKRVAQIKTLIEAADQ 714
           TVIREEVGLSLDKAGKEVLGTASKVVLTKDTTTIVGDGSTQDAVSKRVAQIKTLIEAADQ
Sbjct: 361 TVIREEVGLSLDKAGKEVLGTASKVVLTKDTTTIVGDGSTQDAVSKRVAQIKTLIEAADQ 420

Query: 715 DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT 774
           DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT
Sbjct: 421 DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT 480

Query: 775 LLRLASKVDAIKLSFENDEEKVGADIVKRALAYPLKLIAKNAGVNGSVVSEKVLSSDNFR 834
           LLRLASKVDAIK SFENDEEKVGADIVKRALAYPLKLIAKNAGVNGSVVSEKVLSSDNFR
Sbjct: 481 LLRLASKVDAIKESFENDEEKVGADIVKRALAYPLKLIAKNAGVNGSVVSEKVLSSDNFR 540

Query: 835 YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVAAGNP 881
           YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVAAGNP
Sbjct: 541 YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVAAGNP 600

[Close]

BLAST of Cp4.1LG18g02700 vs. ExPASy TrEMBL
Match: A0A0A0M2C3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G599450 PE=3 SV=1)

HSP 1 Score: 1052 bits (2721), Expect = 0.0
Identity = 567/608 (93.26%), Postives = 580/608 (95.39%), Query Frame = 0


Query: 295 MASTFTAMSSVGTLAAPGSRVVDKKLLSSSDKLTSRTSISSFALPKRQSVVLRRNRSSKI 354
           MASTFTAMSS+GTLAAPGSRV+DKKLLSSSDKLTSRTSISSFALPKRQSVVLRRNRSSKI
Sbjct: 1   MASTFTAMSSIGTLAAPGSRVMDKKLLSSSDKLTSRTSISSFALPKRQSVVLRRNRSSKI 60

Query: 355 SAMAKELHFNQDGSAIKKLQNGVNKLADLVGVTLGPKGRNVV------------------ 414
           SAMAKELHFNQDGSAIKKLQNGVNKLADLVGVTLGPKGRNVV                  
Sbjct: 61  SAMAKELHFNQDGSAIKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVA 120

Query: 415 ---ELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT 474
              ELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT
Sbjct: 121 KEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT 180

Query: 475 RGIEKTAKALVSELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLE 534
           RGIEKTAKALVSELKKMSKEVEDSELADVAAVSAGNN+EVGNMIAEAMSKVGRKGVVTLE
Sbjct: 181 RGIEKTAKALVSELKKMSKEVEDSELADVAAVSAGNNHEVGNMIAEAMSKVGRKGVVTLE 240

Query: 535 EGRSADNSLYVVEGMQFDRGYISPYFVTDSEKMAVEFDNCKLLLVDKKITNARDLINILE 594
           EGRSADN LYVVEGMQFDRGYISPYFVTDSEKMAVE++NCKLLLVDKKITNARDLINILE
Sbjct: 241 EGRSADNFLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINILE 300

Query: 595 EAIRGGYPVLIMAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGA 654
           +AIRGGYPV+IMAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTG 
Sbjct: 301 DAIRGGYPVVIMAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGG 360

Query: 655 TVIREEVGLSLDKAGKEVLGTASKVVLTKDTTTIVGDGSTQDAVSKRVAQIKTLIEAADQ 714
           TVIREEVGLSLDKAGKEVLG ASK+VLTKDTTTIVGDGSTQ+AVSKRVAQIK LIE A+Q
Sbjct: 361 TVIREEVGLSLDKAGKEVLGNASKIVLTKDTTTIVGDGSTQEAVSKRVAQIKNLIEVAEQ 420

Query: 715 DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT 774
           DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT
Sbjct: 421 DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT 480

Query: 775 LLRLASKVDAIKLSFENDEEKVGADIVKRALAYPLKLIAKNAGVNGSVVSEKVLSSDNFR 834
           LLRLASKVDAIK +FENDEEKVGADIVKRAL+YPLKLIAKNAGVNGSVVSEKVLSSDN+R
Sbjct: 481 LLRLASKVDAIKETFENDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSSDNYR 540

Query: 835 YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVAAGNP 881
           YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPV AGNP
Sbjct: 541 YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPAGNP 600

[Close]

BLAST of Cp4.1LG18g02700 vs. TAIR 10
Match: AT1G55490.1 (chaperonin 60 beta )

HSP 1 Score: 941.0 bits (2431), Expect = 6.7e-274
Identity = 510/609 (83.74%), Postives = 543/609 (89.16%), Query Frame = 0


Query: 295 MASTFTAMSSVGTLAAPGSRVVDKKLLSSSDKLTSRTSISSFALPKRQSVVLR-RNRSSK 354
           MASTFTA SS+G++ AP     DKKL+S          +SS +  +RQSV  R R  SS 
Sbjct: 1   MASTFTATSSIGSMVAPNGHKSDKKLIS---------KLSSSSFGRRQSVCPRPRRSSSA 60

Query: 355 ISAMAKELHFNQDGSAIKKLQNGVNKLADLVGVTLGPKGRNV------------------ 414
           I   AKELHFN+DG+ I++LQ GVNKLADLVGVTLGPKGRNV                  
Sbjct: 61  IVCAAKELHFNKDGTTIRRLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTV 120

Query: 415 ---VELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLI 474
              VELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQG IAEGVKVVAAGANPVLI
Sbjct: 121 AREVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLI 180

Query: 475 TRGIEKTAKALVSELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTL 534
           TRGIEKTAKALV+ELKKMSKEVEDSELADVAAVSAGNN E+GNMIAEAMSKVGRKGVVTL
Sbjct: 181 TRGIEKTAKALVTELKKMSKEVEDSELADVAAVSAGNNDEIGNMIAEAMSKVGRKGVVTL 240

Query: 535 EEGRSADNSLYVVEGMQFDRGYISPYFVTDSEKMAVEFDNCKLLLVDKKITNARDLINIL 594
           EEG+SA+N+LYVVEGMQFDRGYISPYFVTDSEKM+VEFDNCKLLLVDKKITNARDL+ +L
Sbjct: 241 EEGKSAENNLYVVEGMQFDRGYISPYFVTDSEKMSVEFDNCKLLLVDKKITNARDLVGVL 300

Query: 595 EEAIRGGYPVLIMAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTG 654
           E+AIRGGYP+LI+AEDIEQEALATLVVNKLRG+LKIAAL+APGFGERKSQYLDDIAILTG
Sbjct: 301 EDAIRGGYPILIIAEDIEQEALATLVVNKLRGTLKIAALRAPGFGERKSQYLDDIAILTG 360

Query: 655 ATVIREEVGLSLDKAGKEVLGTASKVVLTKDTTTIVGDGSTQDAVSKRVAQIKTLIEAAD 714
           ATVIREEVGLSLDKAGKEVLG ASKVVLTK+T+TIVGDGSTQDAV KRV QIK LIE A+
Sbjct: 361 ATVIREEVGLSLDKAGKEVLGNASKVVLTKETSTIVGDGSTQDAVKKRVTQIKNLIEQAE 420

Query: 715 QDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGC 774
           QDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGC
Sbjct: 421 QDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGC 480

Query: 775 TLLRLASKVDAIKLSFENDEEKVGADIVKRALAYPLKLIAKNAGVNGSVVSEKVLSSDNF 834
           TLLRLASKVDAIK + +NDEEKVGADIVKRAL+YPLKLIAKNAGVNGSVVSEKVLS+DN 
Sbjct: 481 TLLRLASKVDAIKATLDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSNDNV 540

Query: 835 RYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVAAGN 882
           ++GYNAATG YEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPV  GN
Sbjct: 541 KFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPVGN 600

[Close]

BLAST of Cp4.1LG18g02700 vs. TAIR 10
Match: AT1G55490.2 (chaperonin 60 beta )

HSP 1 Score: 941.0 bits (2431), Expect = 6.7e-274
Identity = 510/609 (83.74%), Postives = 543/609 (89.16%), Query Frame = 0


Query: 295 MASTFTAMSSVGTLAAPGSRVVDKKLLSSSDKLTSRTSISSFALPKRQSVVLR-RNRSSK 354
           MASTFTA SS+G++ AP     DKKL+S          +SS +  +RQSV  R R  SS 
Sbjct: 1   MASTFTATSSIGSMVAPNGHKSDKKLIS---------KLSSSSFGRRQSVCPRPRRSSSA 60

Query: 355 ISAMAKELHFNQDGSAIKKLQNGVNKLADLVGVTLGPKGRNV------------------ 414
           I   AKELHFN+DG+ I++LQ GVNKLADLVGVTLGPKGRNV                  
Sbjct: 61  IVCAAKELHFNKDGTTIRRLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTV 120

Query: 415 ---VELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLI 474
              VELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQG IAEGVKVVAAGANPVLI
Sbjct: 121 AREVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLI 180

Query: 475 TRGIEKTAKALVSELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTL 534
           TRGIEKTAKALV+ELKKMSKEVEDSELADVAAVSAGNN E+GNMIAEAMSKVGRKGVVTL
Sbjct: 181 TRGIEKTAKALVTELKKMSKEVEDSELADVAAVSAGNNDEIGNMIAEAMSKVGRKGVVTL 240

Query: 535 EEGRSADNSLYVVEGMQFDRGYISPYFVTDSEKMAVEFDNCKLLLVDKKITNARDLINIL 594
           EEG+SA+N+LYVVEGMQFDRGYISPYFVTDSEKM+VEFDNCKLLLVDKKITNARDL+ +L
Sbjct: 241 EEGKSAENNLYVVEGMQFDRGYISPYFVTDSEKMSVEFDNCKLLLVDKKITNARDLVGVL 300

Query: 595 EEAIRGGYPVLIMAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTG 654
           E+AIRGGYP+LI+AEDIEQEALATLVVNKLRG+LKIAAL+APGFGERKSQYLDDIAILTG
Sbjct: 301 EDAIRGGYPILIIAEDIEQEALATLVVNKLRGTLKIAALRAPGFGERKSQYLDDIAILTG 360

Query: 655 ATVIREEVGLSLDKAGKEVLGTASKVVLTKDTTTIVGDGSTQDAVSKRVAQIKTLIEAAD 714
           ATVIREEVGLSLDKAGKEVLG ASKVVLTK+T+TIVGDGSTQDAV KRV QIK LIE A+
Sbjct: 361 ATVIREEVGLSLDKAGKEVLGNASKVVLTKETSTIVGDGSTQDAVKKRVTQIKNLIEQAE 420

Query: 715 QDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGC 774
           QDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGC
Sbjct: 421 QDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGC 480

Query: 775 TLLRLASKVDAIKLSFENDEEKVGADIVKRALAYPLKLIAKNAGVNGSVVSEKVLSSDNF 834
           TLLRLASKVDAIK + +NDEEKVGADIVKRAL+YPLKLIAKNAGVNGSVVSEKVLS+DN 
Sbjct: 481 TLLRLASKVDAIKATLDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSNDNV 540

Query: 835 RYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVAAGN 882
           ++GYNAATG YEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPV  GN
Sbjct: 541 KFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPVGN 600

[Close]

BLAST of Cp4.1LG18g02700 vs. TAIR 10
Match: AT3G13470.1 (TCP-1/cpn60 chaperonin family protein )

HSP 1 Score: 930.6 bits (2404), Expect = 9.1e-271
Identity = 504/608 (82.89%), Postives = 547/608 (89.97%), Query Frame = 0


Query: 295 MASTFTAMSSVGTLAAPGSRVVDKKLLSSSDKLTSRTSISSFALPKRQSVVLRRNRSSKI 354
           MASTFTA SS+G+L AP           ++ KL+S TSISS +  +R +V +RR+R + +
Sbjct: 1   MASTFTATSSLGSLLAP-----------NAIKLSSATSISSSSFGRRHNVCVRRSRPAIV 60

Query: 355 SAMAKELHFNQDGSAIKKLQNGVNKLADLVGVTLGPKGRNV------------------- 414
            A AKELHFN+DG+ I+KLQ GVNKLADLVGVTLGPKGRNV                   
Sbjct: 61  CA-AKELHFNKDGTTIRKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVA 120

Query: 415 --VELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT 474
             VELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQG IAEGVKVVAAGANPVLIT
Sbjct: 121 REVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLIT 180

Query: 475 RGIEKTAKALVSELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLE 534
           RGIEKTAKALV+ELK MSKEVEDSELADVAAVSAGNN+EVG+MIAEAMSKVGRKGVVTLE
Sbjct: 181 RGIEKTAKALVNELKLMSKEVEDSELADVAAVSAGNNHEVGSMIAEAMSKVGRKGVVTLE 240

Query: 535 EGRSADNSLYVVEGMQFDRGYISPYFVTDSEKMAVEFDNCKLLLVDKKITNARDLINILE 594
           EG+SA+N+LYVVEGMQFDRGYISPYFVTDSEKM+VE+DNCKLLLVDKK+TNARDL+ +LE
Sbjct: 241 EGKSAENNLYVVEGMQFDRGYISPYFVTDSEKMSVEYDNCKLLLVDKKVTNARDLVGVLE 300

Query: 595 EAIRGGYPVLIMAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGA 654
           +AIRGGYP+LI+AEDIEQEALATLVVNKLRG+LKIAALKAPGFGERKSQYLDDIAILTGA
Sbjct: 301 DAIRGGYPILIIAEDIEQEALATLVVNKLRGTLKIAALKAPGFGERKSQYLDDIAILTGA 360

Query: 655 TVIREEVGLSLDKAGKEVLGTASKVVLTKDTTTIVGDGSTQDAVSKRVAQIKTLIEAADQ 714
           TVIREEVGLSLDKAGKEVLG ASKVVLTK+ TTIVGDG+TQ+AV+KRV QI+ LIE A+Q
Sbjct: 361 TVIREEVGLSLDKAGKEVLGNASKVVLTKEMTTIVGDGTTQEAVNKRVVQIRNLIEQAEQ 420

Query: 715 DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT 774
           DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT
Sbjct: 421 DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT 480

Query: 775 LLRLASKVDAIKLSFENDEEKVGADIVKRALAYPLKLIAKNAGVNGSVVSEKVLSSDNFR 834
           LLRLASKVDAIK + ENDEEKVGA+IVKRAL+YPLKLIAKNAGVNGSVVSEKVL++DN +
Sbjct: 481 LLRLASKVDAIKDTLENDEEKVGAEIVKRALSYPLKLIAKNAGVNGSVVSEKVLANDNVK 540

Query: 835 YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVAAGNP 882
           +GYNAATG YEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEI EPEPV AGNP
Sbjct: 541 FGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIPEPEPVPAGNP 596

[Close]

BLAST of Cp4.1LG18g02700 vs. TAIR 10
Match: AT5G56500.1 (TCP-1/cpn60 chaperonin family protein )

HSP 1 Score: 906.7 bits (2342), Expect = 1.4e-263
Identity = 496/609 (81.44%), Postives = 536/609 (88.01%), Query Frame = 0


Query: 295 MASTFTAMSSVGTLAAPGSRVVDKKLLSSSDKLTSRTSISSFALPKRQSVVLRRNRSSKI 354
           MASTF+A SS+G+  AP            S++L+S  SISS +  + QS+  R+ R  KI
Sbjct: 1   MASTFSATSSMGSSLAP-----------PSNRLSSFVSISSSSFGRTQSIAQRKARFPKI 60

Query: 355 SAMAKELHFNQDGSAIKKLQNGVNKLADLVGVTLGPKGRNV------------------- 414
            A AK+LHFN+DG+AIKKLQ GVNKLADLVGVTLGPKGRNV                   
Sbjct: 61  YA-AKQLHFNKDGTAIKKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVA 120

Query: 415 --VELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT 474
             VELEDPVENIGAKLVRQAA+KTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT
Sbjct: 121 REVELEDPVENIGAKLVRQAASKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT 180

Query: 475 RGIEKTAKALVSELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLE 534
           RGIEKT KALV+ELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAM+KVGRKGVVTLE
Sbjct: 181 RGIEKTTKALVAELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMAKVGRKGVVTLE 240

Query: 535 EGRSADNSLYVVEGMQFDRGYISPYFVTDSEKMAVEFDNCKLLLVDKKITNARDLINILE 594
           EG+SA+NSLYVVEGMQFDRGYISPYFVTDSEKM  E++NCKL LVDKKITNARD+I+ILE
Sbjct: 241 EGKSAENSLYVVEGMQFDRGYISPYFVTDSEKMCAEYENCKLFLVDKKITNARDIISILE 300

Query: 595 EAIRGGYPVLIMAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGA 654
           +AI+GGYP+LI+AEDIEQE LATLVVNKLRG++K+AALKAPGFGERKSQYLDDIA LTGA
Sbjct: 301 DAIKGGYPLLIIAEDIEQEPLATLVVNKLRGTIKVAALKAPGFGERKSQYLDDIAALTGA 360

Query: 655 TVIREEVGLSLDKAGKEVLGTASKVVLTKDTTTIVGDGSTQDAVSKRVAQIKTLIEAADQ 714
           TVIREEVGL L+K G EVLG A KVVLTKDTTTIVGDGST++ V KRV QIK LIEAA+Q
Sbjct: 361 TVIREEVGLQLEKVGPEVLGNAGKVVLTKDTTTIVGDGSTEEVVKKRVEQIKNLIEAAEQ 420

Query: 715 DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT 774
           DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT
Sbjct: 421 DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT 480

Query: 775 LLRLASKVDAIKLSFENDEEKVGADIVKRALAYPLKLIAKNAGVNGSVVSEKVLSSDNFR 834
           LLRLASKVDAIK +  NDEEKVGADIVK+AL+YPLKLIAKNAGVNGSVVSEKVLSSDN +
Sbjct: 481 LLRLASKVDAIKETLANDEEKVGADIVKKALSYPLKLIAKNAGVNGSVVSEKVLSSDNPK 540

Query: 835 YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVA-AGN 882
           +GYNAATG YEDLMAAGIIDPTKVVRCCLEHA+SVAKTFLMSDCVVVEIKEPE  A AGN
Sbjct: 541 HGYNAATGKYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPESAAPAGN 597

[Close]

BLAST of Cp4.1LG18g02700 vs. TAIR 10
Match: AT5G56500.2 (TCP-1/cpn60 chaperonin family protein )

HSP 1 Score: 906.7 bits (2342), Expect = 1.4e-263
Identity = 496/609 (81.44%), Postives = 536/609 (88.01%), Query Frame = 0


Query: 295 MASTFTAMSSVGTLAAPGSRVVDKKLLSSSDKLTSRTSISSFALPKRQSVVLRRNRSSKI 354
           MASTF+A SS+G+  AP            S++L+S  SISS +  + QS+  R+ R  KI
Sbjct: 1   MASTFSATSSMGSSLAP-----------PSNRLSSFVSISSSSFGRTQSIAQRKARFPKI 60

Query: 355 SAMAKELHFNQDGSAIKKLQNGVNKLADLVGVTLGPKGRNV------------------- 414
            A AK+LHFN+DG+AIKKLQ GVNKLADLVGVTLGPKGRNV                   
Sbjct: 61  YA-AKQLHFNKDGTAIKKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVA 120

Query: 415 --VELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT 474
             VELEDPVENIGAKLVRQAA+KTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT
Sbjct: 121 REVELEDPVENIGAKLVRQAASKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLIT 180

Query: 475 RGIEKTAKALVSELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLE 534
           RGIEKT KALV+ELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAM+KVGRKGVVTLE
Sbjct: 181 RGIEKTTKALVAELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMAKVGRKGVVTLE 240

Query: 535 EGRSADNSLYVVEGMQFDRGYISPYFVTDSEKMAVEFDNCKLLLVDKKITNARDLINILE 594
           EG+SA+NSLYVVEGMQFDRGYISPYFVTDSEKM  E++NCKL LVDKKITNARD+I+ILE
Sbjct: 241 EGKSAENSLYVVEGMQFDRGYISPYFVTDSEKMCAEYENCKLFLVDKKITNARDIISILE 300

Query: 595 EAIRGGYPVLIMAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGA 654
           +AI+GGYP+LI+AEDIEQE LATLVVNKLRG++K+AALKAPGFGERKSQYLDDIA LTGA
Sbjct: 301 DAIKGGYPLLIIAEDIEQEPLATLVVNKLRGTIKVAALKAPGFGERKSQYLDDIAALTGA 360

Query: 655 TVIREEVGLSLDKAGKEVLGTASKVVLTKDTTTIVGDGSTQDAVSKRVAQIKTLIEAADQ 714
           TVIREEVGL L+K G EVLG A KVVLTKDTTTIVGDGST++ V KRV QIK LIEAA+Q
Sbjct: 361 TVIREEVGLQLEKVGPEVLGNAGKVVLTKDTTTIVGDGSTEEVVKKRVEQIKNLIEAAEQ 420

Query: 715 DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT 774
           DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT
Sbjct: 421 DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCT 480

Query: 775 LLRLASKVDAIKLSFENDEEKVGADIVKRALAYPLKLIAKNAGVNGSVVSEKVLSSDNFR 834
           LLRLASKVDAIK +  NDEEKVGADIVK+AL+YPLKLIAKNAGVNGSVVSEKVLSSDN +
Sbjct: 481 LLRLASKVDAIKETLANDEEKVGADIVKKALSYPLKLIAKNAGVNGSVVSEKVLSSDNPK 540

Query: 835 YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVA-AGN 882
           +GYNAATG YEDLMAAGIIDPTKVVRCCLEHA+SVAKTFLMSDCVVVEIKEPE  A AGN
Sbjct: 541 HGYNAATGKYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPESAAPAGN 597

The following BLAST results are available for this feature:

BLAST of Cp4.1LG18g02700 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P21240	9.5e-273	83.74	Chaperonin 60 subunit beta 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9LJE4	1.3e-269	82.89	Chaperonin 60 subunit beta 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
P08927	1.3e-266	85.64	RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Pisum sativ...	[more]
P21241	2.3e-263	82.72	RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Brassica na...	[more]
C0Z361	2.0e-262	81.44	Chaperonin 60 subunit beta 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=C...	[more]

BLAST of Cp4.1LG18g02700 vs. NCBI nr


Match Name	Identity	Description
KAG6590073.1	84.27	hypothetical protein SDJN03_15496, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023515683.1	96.55	ruBisCO large subunit-binding protein subunit beta, chloroplastic-like [Cucurbit...	[more]
QBB73041.1	96.38	ruBisCO large subunit-binding protein [Cucurbita pepo subsp. pepo] >QDE10506.1 r...	[more]
KAG7023741.1	96.22	Chaperonin 60 subunit beta 1, chloroplastic [Cucurbita argyrosperma subsp. argyr...	[more]
XP_022960757.1	96.05	ruBisCO large subunit-binding protein subunit beta, chloroplastic-like [Cucurbit...	[more]

BLAST of Cp4.1LG18g02700 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A411HRF7	96.38	RuBisCO large subunit-binding protein OS=Cucurbita pepo subsp. pepo OX=3664 PE=2...	[more]
A0A4Y5WS44	96.38	RuBisCO2 OS=Cucurbita pepo OX=3663 PE=2 SV=1	[more]
A0A6J1H9X2	96.05	ruBisCO large subunit-binding protein subunit beta, chloroplastic-like OS=Cucurb...	[more]
A0A6J1JIS5	95.89	ruBisCO large subunit-binding protein subunit beta, chloroplastic-like OS=Cucurb...	[more]
A0A0A0M2C3	93.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G599450 PE=3 SV=1	[more]

BLAST of Cp4.1LG18g02700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55490.1	6.7e-274	83.74	chaperonin 60 beta	[more]
AT1G55490.2	6.7e-274	83.74	chaperonin 60 beta	[more]
AT3G13470.1	9.1e-271	82.89	TCP-1/cpn60 chaperonin family protein	[more]
AT5G56500.1	1.4e-263	81.44	TCP-1/cpn60 chaperonin family protein	[more]
AT5G56500.2	1.4e-263	81.44	TCP-1/cpn60 chaperonin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 460..480
None	No IPR available	GENE3D	1.10.510.10	Transferase(Phosphotransferase) domain 1	coord: 158..280 e-value: 2.3E-28 score: 100.8
None	No IPR available	GENE3D	3.30.200.20	Phosphorylase Kinase; domain 1	coord: 37..157 e-value: 7.2E-29 score: 101.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..48
None	No IPR available	PANTHER	PTHR45633	60 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL	coord: 396..875
None	No IPR available	PANTHER	PTHR45633	60 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL	coord: 302..396
None	No IPR available	PANTHER	PTHR45633:SF20	CHAPERONIN 60 SUBUNIT BETA 1, CHLOROPLASTIC	coord: 302..396
None	No IPR available	PANTHER	PTHR45633:SF20	CHAPERONIN 60 SUBUNIT BETA 1, CHLOROPLASTIC	coord: 396..875
IPR001844	Chaperonin Cpn60	PRINTS	PR00298	CHAPERONIN60	coord: 603..626 score: 55.55 coord: 733..754 score: 76.22 coord: 384..410 score: 42.98 coord: 685..710 score: 57.53
IPR001844	Chaperonin Cpn60	TIGRFAM	TIGR02348	TIGR02348	coord: 396..864 e-value: 5.1E-194 score: 643.6
IPR001844	Chaperonin Cpn60	CDD	cd03344	GroEL	coord: 359..861 e-value: 0.0 score: 770.085
IPR002423	Chaperonin Cpn60/TCP-1 family	PFAM	PF00118	Cpn60_TCP1	coord: 397..862 e-value: 3.4E-84 score: 283.2
IPR000719	Protein kinase domain	PFAM	PF00069	Pkinase	coord: 75..261 e-value: 1.6E-28 score: 99.8
IPR000719	Protein kinase domain	PROSITE	PS50011	PROTEIN_KINASE_DOM	coord: 74..363 score: 25.714706
IPR027413	GroEL-like equatorial domain superfamily	GENE3D	1.10.560.10		coord: 398..855 e-value: 4.4E-190 score: 633.9
IPR027413	GroEL-like equatorial domain superfamily	GENE3D	1.10.560.10		coord: 368..396 e-value: 3.0E-6 score: 27.9
IPR027413	GroEL-like equatorial domain superfamily	SUPERFAMILY	48592	GroEL equatorial domain-like	coord: 366..859
IPR027410	TCP-1-like chaperonin intermediate domain superfamily	GENE3D	3.30.260.10		coord: 473..745 e-value: 4.4E-190 score: 633.9
IPR027410	TCP-1-like chaperonin intermediate domain superfamily	SUPERFAMILY	54849	GroEL-intermediate domain like	coord: 476..540
IPR027409	GroEL-like apical domain superfamily	GENE3D	3.50.7.10	GroEL	coord: 526..710 e-value: 4.4E-190 score: 633.9
IPR027409	GroEL-like apical domain superfamily	SUPERFAMILY	52029	GroEL apical domain-like	coord: 520..711
IPR017441	Protein kinase, ATP binding site	PROSITE	PS00107	PROTEIN_KINASE_ATP	coord: 80..109
IPR008271	Serine/threonine-protein kinase, active site	PROSITE	PS00108	PROTEIN_KINASE_ST	coord: 205..217
IPR018370	Chaperonin Cpn60, conserved site	PROSITE	PS00296	CHAPERONINS_CPN60	coord: 740..751
IPR011009	Protein kinase-like domain superfamily	SUPERFAMILY	56112	Protein kinase-like (PK-like)	coord: 50..261

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG18g02700.1	Cp4.1LG18g02700.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051085	chaperone cofactor-dependent protein refolding
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0042026	protein refolding
biological_process	GO:0006457	protein folding
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0004672	protein kinase activity