Cp4.1LG18g01870 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG18g01870
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1
Location	Cp4.1LG18: 3575468 .. 3576091 (+)
RNA-Seq Expression	Cp4.1LG18g01870
Synteny	Cp4.1LG18g01870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAATGCAATGTCTCCATGTCTTATACCCCCTTCCATTACCAAACGCCACCGCTCCTCCGCCGTGAAGCTCATATTCTCCAGCGGGCCCACCAGAATCCTCGCCGGAAGCCACCACTTCGCCGGAGAGATCATGTTCCAATTTCCCGACATGATAGTCTGCCACGCTGACTCCTTCTTCATCGGCCACCGAATTCCATCCTTAGCCATTGAAGACAAGCTTCTCGCCGGCGAAACCTACTTGGTTCTCCCCATAGACCGATTCTCCTTGAACGATGTTCTCTCAACGTCGTCGCTCGCTGCCATCGGCGCCGGGAATGAGGCGGCGGAGAAATTCTCGAGTTCGTGTCCGTTTGAGTACGTCCGAGGGCGGAATGGGAAAGCGCTGATTAAGGTCATGCCGGAGTTTATTGTTCGGTTGGTTTCTCCTGGCGGCGCGTACGGCGGAGAGGGTGGTGGGTTTTTGTGTAGCACGCCGGAGTTGAAGAAGCATTACGATCAACTCGTCGGAACATCGAAGGGGCAGGTTTGGTCGCCGTCGTTGGAGACTATTTCGGAGTATAAAATTAGGTATTCGCCCTGTAGATTTGTTGGGATTAAAGTTAAACAAAAGGAAGGCTAA

mRNA sequence

ATGGGGAATGCAATGTCTCCATGTCTTATACCCCCTTCCATTACCAAACGCCACCGCTCCTCCGCCGTGAAGCTCATATTCTCCAGCGGGCCCACCAGAATCCTCGCCGGAAGCCACCACTTCGCCGGAGAGATCATGTTCCAATTTCCCGACATGATAGTCTGCCACGCTGACTCCTTCTTCATCGGCCACCGAATTCCATCCTTAGCCATTGAAGACAAGCTTCTCGCCGGCGAAACCTACTTGGTTCTCCCCATAGACCGATTCTCCTTGAACGATGTTCTCTCAACGTCGTCGCTCGCTGCCATCGGCGCCGGGAATGAGGCGGCGGAGAAATTCTCGAGTTCGTGTCCGTTTGAGTACGTCCGAGGGCGGAATGGGAAAGCGCTGATTAAGGTCATGCCGGAGTTTATTGTTCGGTTGGTTTCTCCTGGCGGCGCGTACGGCGGAGAGGGTGGTGGGTTTTTGTGTAGCACGCCGGAGTTGAAGAAGCATTACGATCAACTCGTCGGAACATCGAAGGGGCAGGTTTGGTCGCCGTCGTTGGAGACTATTTCGGAGTATAAAATTAGGTATTCGCCCTGTAGATTTGTTGGGATTAAAGTTAAACAAAAGGAAGGCTAA

Coding sequence (CDS)

ATGGGGAATGCAATGTCTCCATGTCTTATACCCCCTTCCATTACCAAACGCCACCGCTCCTCCGCCGTGAAGCTCATATTCTCCAGCGGGCCCACCAGAATCCTCGCCGGAAGCCACCACTTCGCCGGAGAGATCATGTTCCAATTTCCCGACATGATAGTCTGCCACGCTGACTCCTTCTTCATCGGCCACCGAATTCCATCCTTAGCCATTGAAGACAAGCTTCTCGCCGGCGAAACCTACTTGGTTCTCCCCATAGACCGATTCTCCTTGAACGATGTTCTCTCAACGTCGTCGCTCGCTGCCATCGGCGCCGGGAATGAGGCGGCGGAGAAATTCTCGAGTTCGTGTCCGTTTGAGTACGTCCGAGGGCGGAATGGGAAAGCGCTGATTAAGGTCATGCCGGAGTTTATTGTTCGGTTGGTTTCTCCTGGCGGCGCGTACGGCGGAGAGGGTGGTGGGTTTTTGTGTAGCACGCCGGAGTTGAAGAAGCATTACGATCAACTCGTCGGAACATCGAAGGGGCAGGTTTGGTCGCCGTCGTTGGAGACTATTTCGGAGTATAAAATTAGGTATTCGCCCTGTAGATTTGTTGGGATTAAAGTTAAACAAAAGGAAGGCTAA

Protein sequence

MGNAMSPCLIPPSITKRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGIKVKQKEG

Homology

[Close]

BLAST of Cp4.1LG18g01870 vs. NCBI nr
Match: XP_023516713.1 (uncharacterized protein LOC111780520 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 420 bits (1080), Expect = 2.60e-148
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0


Query: 1   MGNAMSPCLIPPSITKRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSF 60
           MGNAMSPCLIPPSITKRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSF
Sbjct: 1   MGNAMSPCLIPPSITKRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSF 60

Query: 61  FIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFE 120
           FIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFE
Sbjct: 61  FIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFE 120

Query: 121 YVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSP 180
           YVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSP
Sbjct: 121 YVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSP 180

Query: 181 SLETISEYKIRYSPCRFVGIKVKQKEG 207
           SLETISEYKIRYSPCRFVGIKVKQKEG
Sbjct: 181 SLETISEYKIRYSPCRFVGIKVKQKEG 207

[Close]

BLAST of Cp4.1LG18g01870 vs. NCBI nr
Match: XP_022961145.1 (uncharacterized protein LOC111461744 [Cucurbita moschata])

HSP 1 Score: 417 bits (1071), Expect = 6.13e-147
Identity = 205/207 (99.03%), Postives = 205/207 (99.03%), Query Frame = 0


Query: 1   MGNAMSPCLIPPSITKRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSF 60
           MGNAMSPCLIPPSIT RHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSF
Sbjct: 1   MGNAMSPCLIPPSITNRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSF 60

Query: 61  FIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFE 120
           FIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFE
Sbjct: 61  FIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFE 120

Query: 121 YVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSP 180
           YVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSP
Sbjct: 121 YVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSP 180

Query: 181 SLETISEYKIRYSPCRFVGIKVKQKEG 207
           SLETISEYKIRYSPCRFVG KVKQKEG
Sbjct: 181 SLETISEYKIRYSPCRFVGFKVKQKEG 207

[Close]

BLAST of Cp4.1LG18g01870 vs. NCBI nr
Match: KAG6590171.1 (hypothetical protein SDJN03_15594, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 415 bits (1066), Expect = 3.55e-146
Identity = 204/207 (98.55%), Postives = 205/207 (99.03%), Query Frame = 0


Query: 1   MGNAMSPCLIPPSITKRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSF 60
           MGNAMSPCLIPPSIT RHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHA+SF
Sbjct: 1   MGNAMSPCLIPPSITNRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHANSF 60

Query: 61  FIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFE 120
           FIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFE
Sbjct: 61  FIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFE 120

Query: 121 YVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSP 180
           YVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSP
Sbjct: 121 YVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSP 180

Query: 181 SLETISEYKIRYSPCRFVGIKVKQKEG 207
           SLETISEYKIRYSPCRFVG KVKQKEG
Sbjct: 181 SLETISEYKIRYSPCRFVGFKVKQKEG 207

[Close]

BLAST of Cp4.1LG18g01870 vs. NCBI nr
Match: XP_022988214.1 (uncharacterized protein LOC111485518 [Cucurbita maxima])

HSP 1 Score: 411 bits (1057), Expect = 8.36e-145
Identity = 201/207 (97.10%), Postives = 204/207 (98.55%), Query Frame = 0


Query: 1   MGNAMSPCLIPPSITKRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSF 60
           MGNA+SPC+IPPSIT RHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSF
Sbjct: 1   MGNAISPCIIPPSITNRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSF 60

Query: 61  FIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFE 120
           FIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPF+
Sbjct: 61  FIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFQ 120

Query: 121 YVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSP 180
           YVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGT KGQVWSP
Sbjct: 121 YVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTPKGQVWSP 180

Query: 181 SLETISEYKIRYSPCRFVGIKVKQKEG 207
           SLETISEYKIRYSPCRFVG KVKQKEG
Sbjct: 181 SLETISEYKIRYSPCRFVGFKVKQKEG 207

[Close]

BLAST of Cp4.1LG18g01870 vs. NCBI nr
Match: KAA0056017.1 (DUF4228 domain protein [Cucumis melo var. makuwa] >TYK27704.1 DUF4228 domain protein [Cucumis melo var. makuwa])

HSP 1 Score: 341 bits (874), Expect = 7.82e-117
Identity = 167/212 (78.77%), Postives = 186/212 (87.74%), Query Frame = 0


Query: 1   MGNAMSPCLIPPSIT-KRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADS 60
           MGNA+SPCLI  SI+ +RHR SAVKL+F+ GPT+ L G+HHFAGEIMFQFPDM+VCHA+S
Sbjct: 1   MGNAVSPCLISISISLRRHRPSAVKLVFTDGPTKFLVGNHHFAGEIMFQFPDMMVCHAES 60

Query: 61  FFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPF 120
           FFIGH IPSL+I+D+LL GETYLVLPIDRF+  DVLSTSSLA IGAGN +AEKFS  CPF
Sbjct: 61  FFIGHPIPSLSIDDELLVGETYLVLPIDRFASVDVLSTSSLAMIGAGNMSAEKFSGPCPF 120

Query: 121 EYVRGRNGKALIKVMPEFIVRLVSP----GGAYGGEGGGFLCSTPELKKHYDQLVGTSKG 180
           EYVRG NG+ LIKVMPEFIVRL+SP    GG  GG GGGFLCSTPELKKHYDQLVG++KG
Sbjct: 121 EYVRGTNGRVLIKVMPEFIVRLISPAAMDGGESGGGGGGFLCSTPELKKHYDQLVGSTKG 180

Query: 181 QVWSPSLETISEYKIRYSPCRFVGIKVKQKEG 207
           QVWSP LETISEYKIRYSPCRFVG K+KQKEG
Sbjct: 181 QVWSPKLETISEYKIRYSPCRFVGFKLKQKEG 212

[Close]

BLAST of Cp4.1LG18g01870 vs. ExPASy TrEMBL
Match: A0A6J1HB88 (uncharacterized protein LOC111461744 OS=Cucurbita moschata OX=3662 GN=LOC111461744 PE=4 SV=1)

HSP 1 Score: 417 bits (1071), Expect = 2.97e-147
Identity = 205/207 (99.03%), Postives = 205/207 (99.03%), Query Frame = 0


Query: 1   MGNAMSPCLIPPSITKRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSF 60
           MGNAMSPCLIPPSIT RHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSF
Sbjct: 1   MGNAMSPCLIPPSITNRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSF 60

Query: 61  FIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFE 120
           FIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFE
Sbjct: 61  FIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFE 120

Query: 121 YVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSP 180
           YVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSP
Sbjct: 121 YVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSP 180

Query: 181 SLETISEYKIRYSPCRFVGIKVKQKEG 207
           SLETISEYKIRYSPCRFVG KVKQKEG
Sbjct: 181 SLETISEYKIRYSPCRFVGFKVKQKEG 207

[Close]

BLAST of Cp4.1LG18g01870 vs. ExPASy TrEMBL
Match: A0A6J1JKY3 (uncharacterized protein LOC111485518 OS=Cucurbita maxima OX=3661 GN=LOC111485518 PE=4 SV=1)

HSP 1 Score: 411 bits (1057), Expect = 4.05e-145
Identity = 201/207 (97.10%), Postives = 204/207 (98.55%), Query Frame = 0


Query: 1   MGNAMSPCLIPPSITKRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSF 60
           MGNA+SPC+IPPSIT RHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSF
Sbjct: 1   MGNAISPCIIPPSITNRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSF 60

Query: 61  FIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFE 120
           FIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPF+
Sbjct: 61  FIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFQ 120

Query: 121 YVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSP 180
           YVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGT KGQVWSP
Sbjct: 121 YVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTPKGQVWSP 180

Query: 181 SLETISEYKIRYSPCRFVGIKVKQKEG 207
           SLETISEYKIRYSPCRFVG KVKQKEG
Sbjct: 181 SLETISEYKIRYSPCRFVGFKVKQKEG 207

[Close]

BLAST of Cp4.1LG18g01870 vs. ExPASy TrEMBL
Match: A0A5A7UN34 (DUF4228 domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold225G00360 PE=4 SV=1)

HSP 1 Score: 341 bits (874), Expect = 3.79e-117
Identity = 167/212 (78.77%), Postives = 186/212 (87.74%), Query Frame = 0


Query: 1   MGNAMSPCLIPPSIT-KRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADS 60
           MGNA+SPCLI  SI+ +RHR SAVKL+F+ GPT+ L G+HHFAGEIMFQFPDM+VCHA+S
Sbjct: 1   MGNAVSPCLISISISLRRHRPSAVKLVFTDGPTKFLVGNHHFAGEIMFQFPDMMVCHAES 60

Query: 61  FFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPF 120
           FFIGH IPSL+I+D+LL GETYLVLPIDRF+  DVLSTSSLA IGAGN +AEKFS  CPF
Sbjct: 61  FFIGHPIPSLSIDDELLVGETYLVLPIDRFASVDVLSTSSLAMIGAGNMSAEKFSGPCPF 120

Query: 121 EYVRGRNGKALIKVMPEFIVRLVSP----GGAYGGEGGGFLCSTPELKKHYDQLVGTSKG 180
           EYVRG NG+ LIKVMPEFIVRL+SP    GG  GG GGGFLCSTPELKKHYDQLVG++KG
Sbjct: 121 EYVRGTNGRVLIKVMPEFIVRLISPAAMDGGESGGGGGGFLCSTPELKKHYDQLVGSTKG 180

Query: 181 QVWSPSLETISEYKIRYSPCRFVGIKVKQKEG 207
           QVWSP LETISEYKIRYSPCRFVG K+KQKEG
Sbjct: 181 QVWSPKLETISEYKIRYSPCRFVGFKLKQKEG 212

[Close]

BLAST of Cp4.1LG18g01870 vs. ExPASy TrEMBL
Match: A0A1S3BP11 (uncharacterized protein LOC103491983 OS=Cucumis melo OX=3656 GN=LOC103491983 PE=4 SV=1)

HSP 1 Score: 341 bits (874), Expect = 3.79e-117
Identity = 167/212 (78.77%), Postives = 186/212 (87.74%), Query Frame = 0


Query: 1   MGNAMSPCLIPPSIT-KRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADS 60
           MGNA+SPCLI  SI+ +RHR SAVKL+F+ GPT+ L G+HHFAGEIMFQFPDM+VCHA+S
Sbjct: 1   MGNAVSPCLISISISLRRHRPSAVKLVFTDGPTKFLVGNHHFAGEIMFQFPDMMVCHAES 60

Query: 61  FFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPF 120
           FFIGH IPSL+I+D+LL GETYLVLPIDRF+  DVLSTSSLA IGAGN +AEKFS  CPF
Sbjct: 61  FFIGHPIPSLSIDDELLVGETYLVLPIDRFASVDVLSTSSLAMIGAGNMSAEKFSGPCPF 120

Query: 121 EYVRGRNGKALIKVMPEFIVRLVSP----GGAYGGEGGGFLCSTPELKKHYDQLVGTSKG 180
           EYVRG NG+ LIKVMPEFIVRL+SP    GG  GG GGGFLCSTPELKKHYDQLVG++KG
Sbjct: 121 EYVRGTNGRVLIKVMPEFIVRLISPAAVDGGESGGGGGGFLCSTPELKKHYDQLVGSTKG 180

Query: 181 QVWSPSLETISEYKIRYSPCRFVGIKVKQKEG 207
           QVWSP LETISEYKIRYSPCRFVG K+KQKEG
Sbjct: 181 QVWSPKLETISEYKIRYSPCRFVGFKLKQKEG 212

[Close]

BLAST of Cp4.1LG18g01870 vs. ExPASy TrEMBL
Match: A0A0A0LZV5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G627480 PE=4 SV=1)

HSP 1 Score: 332 bits (851), Expect = 1.21e-113
Identity = 162/212 (76.42%), Postives = 183/212 (86.32%), Query Frame = 0


Query: 1   MGNAMSPCLIPPSITKRHRS-SAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADS 60
           MGNA+SPCL+  SI++ HR  S VKL+F++GPT+ LAG HHFAGEIMFQFPDM+VCHA+S
Sbjct: 1   MGNAVSPCLLSISISRCHRRPSTVKLVFTNGPTKFLAGDHHFAGEIMFQFPDMMVCHAES 60

Query: 61  FFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPF 120
           FFIGH IPSL+I+D+L+AGETYL+LPIDRF+  DVLSTSSLA IGAGN + EKFS  CPF
Sbjct: 61  FFIGHPIPSLSIDDQLIAGETYLILPIDRFASVDVLSTSSLATIGAGNMSVEKFSGPCPF 120

Query: 121 EYVRGRNGKALIKVMPEFIVRLVSPGGAYGGE----GGGFLCSTPELKKHYDQLVGTSKG 180
           EYVRG NGK LIKVMPEFIVRL+S     GGE    GGGFLCSTPELKKHYDQLVG++KG
Sbjct: 121 EYVRGTNGKVLIKVMPEFIVRLISQAAMDGGESEGGGGGFLCSTPELKKHYDQLVGSTKG 180

Query: 181 QVWSPSLETISEYKIRYSPCRFVGIKVKQKEG 207
           QVWSP LETISEYKIRYSPCRFVG K+KQKEG
Sbjct: 181 QVWSPKLETISEYKIRYSPCRFVGFKLKQKEG 212

[Close]

BLAST of Cp4.1LG18g01870 vs. TAIR 10
Match: AT5G12340.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 175.3 bits (443), Expect = 5.3e-44
Identity = 102/223 (45.74%), Postives = 133/223 (59.64%), Query Frame = 0


Query: 1   MGNAMSPCLIPPSITKRHRSSAVKLIFSSGPTRILAG-SHHFAGEIMFQFPDMIVCHADS 60
           MG ++     P  I +R +     + F    T+ L G   H AGEIMF+FPD IVCHADS
Sbjct: 1   MGRSLINSCFP--IIRRRQGIVTLVFFEHVSTKTLCGFKKHVAGEIMFEFPDQIVCHADS 60

Query: 61  FFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKF------ 120
           F+IG +IP+LA++D L+ G+TY VLPI+RF    +L+TS L+   +  E           
Sbjct: 61  FYIGRQIPALAMDDYLIPGQTYFVLPIERFQYK-ILTTSCLSIFNSNLENVRSNTPPLNF 120

Query: 121 ---SSSCPFEYVRGRNGKALIKVMPEFIVRLVSPG-------GAYGGEGGGFLCSTPELK 180
              SS  PFEY +G NGK LIKV PEFI+ L+              GE    +C++PELK
Sbjct: 121 TAPSSPPPFEYSQGPNGKILIKVSPEFIISLICKNRNIREEEATSCGENSA-ICNSPELK 180

Query: 181 KHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGIKVKQKE 207
           K YDQLVGT +  +WSP+L+TISE+KIR SP RF G+  KQ E
Sbjct: 181 KQYDQLVGT-REHMWSPNLQTISEHKIRVSPLRFFGLNRKQDE 218

[Close]

BLAST of Cp4.1LG18g01870 vs. TAIR 10
Match: AT1G28190.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G12340.1); Has 166 Blast hits to 162 proteins in 36 species: Archae - 0; Bacteria - 2; Metazoa - 15; Fungi - 5; Plants - 124; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). )

HSP 1 Score: 78.2 bits (191), Expect = 8.7e-15
Identity = 61/193 (31.61%), Postives = 89/193 (46.11%), Query Frame = 0


Query: 12  PSITKRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSFFIGHRIPSLAI 71
           P   +      +KL+ S G  ++         E+   FP   +C +D  +IG + P L+ 
Sbjct: 28  PRPDRTSNGGRIKLVRSDGSLQVY-DRPVVVSELTKDFPKHKICRSDLLYIGQKTPVLSE 87

Query: 72  EDKLLAGETYLVLPIDRFSLNDV--LSTSSLAAIGAGNEAAEKFSSS-CPFEYVRGRNGK 131
            + L  G  Y +LP D F  ND+  L+ ++L     G    +K      PF   +G  G+
Sbjct: 88  TETLKLGLNYFLLPSDFFK-NDLSFLTIATLKTPQNGGVLVKKTQQQPQPFLIQKGEKGE 147

Query: 132 AL-IKVMPEFIVRLVSPGGAY-----------GGEGGGFLCSTPELKKHYDQLVGTSKGQ 190
            L I+V  EF+  L+  G              GGEG G +C+T +LKK Y QLVG  +  
Sbjct: 148 RLRIRVSEEFVSELMMEGKKNRVNEEEEEEEGGGEGEGRVCTTVKLKKDYVQLVGLRR-- 207

The following BLAST results are available for this feature:

BLAST of Cp4.1LG18g01870 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG18g01870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023516713.1	2.60e-148	100.00	uncharacterized protein LOC111780520 [Cucurbita pepo subsp. pepo]	[more]
XP_022961145.1	6.13e-147	99.03	uncharacterized protein LOC111461744 [Cucurbita moschata]	[more]
KAG6590171.1	3.55e-146	98.55	hypothetical protein SDJN03_15594, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022988214.1	8.36e-145	97.10	uncharacterized protein LOC111485518 [Cucurbita maxima]	[more]
KAA0056017.1	7.82e-117	78.77	DUF4228 domain protein [Cucumis melo var. makuwa] >TYK27704.1 DUF4228 domain pro...	[more]

BLAST of Cp4.1LG18g01870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HB88	2.97e-147	99.03	uncharacterized protein LOC111461744 OS=Cucurbita moschata OX=3662 GN=LOC1114617...	[more]
A0A6J1JKY3	4.05e-145	97.10	uncharacterized protein LOC111485518 OS=Cucurbita maxima OX=3661 GN=LOC111485518...	[more]
A0A5A7UN34	3.79e-117	78.77	DUF4228 domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2...	[more]
A0A1S3BP11	3.79e-117	78.77	uncharacterized protein LOC103491983 OS=Cucumis melo OX=3656 GN=LOC103491983 PE=...	[more]
A0A0A0LZV5	1.21e-113	76.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G627480 PE=4 SV=1	[more]

BLAST of Cp4.1LG18g01870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12340.1	5.3e-44	45.74	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G28190.1	8.7e-15	31.61	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..187 e-value: 7.2E-29 score: 101.5
None	No IPR available	PANTHER	PTHR33052	DUF4228 DOMAIN PROTEIN-RELATED	coord: 1..193
None	No IPR available	PANTHER	PTHR33052:SF4	DUF4228 DOMAIN PROTEIN	coord: 1..193

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG18g01870.1	Cp4.1LG18g01870.1	mRNA