Cp4.1LG17g11240 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTGCTGGGCGGCCCAATATGGTTCTATAAAAGCTGAAGCATTCGTGTTCGGCGCCTGTTCGCGGCATTTGCGATTGGGATTTATTCAAAAGCTTAGACGCGCAGCAAATTAGGGTTTCGATCTGTGAAAGCTCAAAATTCATCACCGAGATCGATCATGATTTACGACGTTAACTCCCCTCTCTTCCGCTCCTTCCTCAGCCAGAGAGGAGGCCCTTCCGACAGGTGGTATTCTCCTCTATTTTAACACTCTATTGTTGTATTCTTGTATCAATCGCACGAGTGCCAGAATTCTGCATCTTTCTTAGTAGGTTTGGATTTGAATGCACCTATCTAAGAGACTTTTAGAGTTTGTTAGAGTTTTCGAGACAAGTTTGTAAGAATACTAGAAACTATTCATTTGGGAGCTTTATTTTTCATTTTTAGAAATTAGAAATTATGTTTGATACTCACTCTTAAATTATAAGTTGAAAGATTTTTAAACTTCGTCGATGTAAATGTAATGGACAAATTGTAATGATCATGGTTGATTGAGTATGAAGACTGGATTCTTGGTCATTGCAAATTTTGGGGCATGTTGTCTGAAAATATATATTTTTTTTGGCTACTCCATTTAGAAATTTTTAAGAATCCCCCTTAGTCAAACAACTTCACAATCAACTTTGTTGTGTATATAAATTCTACGTCGGGTAAAGAAAGTGCTTTGTCTTCTCGTTGTCTTCAACTCCTAAAATATTCGGTTTGTGATCATAAGCATAAGATGTAGTTTGAAGTGCTTCTTTAATCATCAAGAGAACTTGTCTAATGATTTTTTGTGTAGCCTACCTGCTTATCATCTCTCTCTCTTCCATTCTTGAGCCTGAAACTTCTAATCTGTTTTCAGAAGGTTTGGGGATCTGAAAATGCATTAAACTTAAAGTAACAATCTTAGATGGATGGTTTCTTTTAAGAGGGATGGAAAAGACGTAGGAGGAGATGTGGGAGGTTGTGAGGTTTAATGCATCTTTGTAAGCATCTGTTAAATGGACAATTTTGTAATTATCAGCTTGGTGTCATTCTTTTGGATTGCAGTCCATTCCTGTAGCTAGTTGCCTAGTTGAGGAGGACTCTTTTTGTTGACTTGTTTTGTATGACCTTGTTATTTCTTTCATTTATCTCAAAGAAAGCTTGGTGTCTTACCCCCCAGAAAAAGAGAGTCAAAACTGTCAAACTTGGGATTTGATCTTTTCTCATGCCGATTTTCCTTGTCTTGTTGTTTTTTATGGTACCTTTTGTTCTTAATTTTGCGATAAATTTCACCATTTTCTTGTTAATCTTCTTTTTCTGTAATACATAGCTTGGAATGATAGACTCGCTACATAGATTAACTTGGAAACCTATTCGTTCTTCCTGACTGAGCTTCAAGTCAACCTCAATTTAATCTTTGGGCTTTTGTGGTTGCAATGCAACCATGTAATTAAATCTTGAATGTGAAGCACATACATTTGAGTTTGGATAGTGTATCAATGTCCAACATATATTTGGCACACTTCAACACATATTGAATACATGATAGACATGTATTCAGGTGAACAATTGTCAAACGTGTATTGCACAGTTGTAAATGTAAGGTGAACAATTGTTGTACACTTGAATTTAAGTGTTGTGGCAATTTTGTAAATGGACTTTAAAAAAAGTATTGGAGATAAGAAGTAATTGACTTATTTTTAAACGCATATGAATGAATATGCATCATTGACTTTAAATTTCTTATGAATACATATGCATTATTGACTTAAAATTTCACGTAGAAAAATGTTAGGTTGGGTTGGGTTTTGTTTATAAATGTTTTCTTGTAAATTACTACATGATTAGAAGTTGGTGATTAGTTTCTTCAACCTTTGTAAGCATTACACATTTACAACTATTATTGAAAAATCGACAAAAATGTGGACTTATTTACTACTTGCTAATGATACAAAGAGTTGAAACATTTTTCTTTCAGTTCTTATTGAAATCCATCCATTGATCCTGAAATATTTTTTTCCATTCTTTATATCCCTTGATGTGCCGTAATTTGTTGCATTACCTAGCTTAGAAACTGGTGTTTTTTCTACATGCTTTTGCTGTCATGCTTCTTGTGCCACGTAAGCTTCTCTTGAGATTTGACCTGACGAGAGTGAGGTTAAGAGCTTATGATGTTCTTCAGTGTTTAATCTTTGTCTGAATTGAATGGTTTAGGAAAATGGAGCAGAAGCCGAAAGAACAGAGACCGAAAGCCAGTGAGAATAAGCCTGTTATGTCAGAATGAGAATGAGTTGGTTAAATCCTTACCGATTCTCTTCCGTTTTAGTAAAGTTTTAAAAATTAAACACAAAAATGGAGTTTGGTTGAAGTTGTAGAATAGACAGATTCCATGGACTTGACCTCAAATAGTTCCAATTGCAACTGGAGCACAGGCTTGGCTTCTTAGTTAACAATTAAAGGGCAGGGTGGAACCTTTAACTTTAAGTAAGGTAGTTGATGTCTTATCTAAGATGAGTTGACTCTTTGAGGTATTATTGCTTAGATGTTTGAACTTCCGTGCAGGTGGGTGTCAAAGCAAGTGATGAAAGAGAAGTGAAGACCGAAGAGTTTAGAGGTCGATTGATCCGACTCCCAAAAGTTGTGGCGACAAAGCTCGCTCTCCATCGTCTATCTAGCGATGGAGGAAGGAAGTTGTTCTGGCGAGACTAAGAAAGAAAGGGGAGAGAGTTTGAGCCATACAATTTTGACACCAGAAAGGCAGAAACTTTTGCCCCAATTCGAAAGGTGGACAATCTCTTTTATCCTATCTCCATCTGCAATATTTATTACTTCCAAAACTGATATGTCATTCATTTATTACTTTCAGAAATTTATCTATGGATGCTATTTTGTGCCCTCTCTTTTCTTCTTGGGGTGTGCTGCCAAAGTTGGGTTAGGGATGTCATGTGAATCGTTCCATATTTTCGTGTTTGTTCCTAAGTTCCTCAACCTGACCAACCCGACTAGAGTGATTAACCCAATCCGACCCATTCCATCCCTCGTATCACGAAATTGGGTCTTGGGGTTTAACACTTTGACTCAACAAATTTTAATGGAGAGACAAGGCAAGATGACTCACAATTGGATTAAAGCAGAGATGCCCATGTGATGGGGAAAGATTTAAATATACTTGTTTTAAATAATGTTATAAAATATCCTAAGACAAAAAATAATACTCTACAATCATAAAGTTCAACCAACATAATATCAAAACAATTCAAAATTTAATATCACTACATGGGTCGTCAACAACTTATTTACTATAACAACAACAATAATAGAAAATAAGTGAATAATTGGGGCGGGGCGGGGATATGGACATGGACGAGGAATAAAGTTTTCGTCCCCATCCCTATTTAGTCAACGGGAAAAAAACTCTCCTTACTCCCTCCCCTGTTCATCAAAATATTTTTCTAATATATCATAAAATTTAAACACTATACAAAATTATTAAACACATCTTTAAAACCAACTCAAATTTACTCCTTTATTGAAGTGTTCATGAACTTACTAGACATTCCTTCTAAACCTCACAATCTTGAAGAGAATAAATCTTAAACTTTTCAAAAAGCCAAAAATAGAATAAAACATGAAAGTTCAGAAACTAAAATGAAATTTTACCGTTCGTTTATGAATGGATTGTGAAGTGGAGGAATGAATGAGTGGGTTTGGGCATTGGCATGTGGAAAATTTGGGTACACAACCACTCTAAGCCTCTTCTTGTCATCCAACTCCTATAAACATATGGGCTTCTGATGTTTGTTCATTCCACCTACCAATCCTTTTCTCTCTTTTTAAAGTTTCCTCCTTCAACCTCTCATAATTGCTAATGTTTTATGCCTTTTTGGCCTACACAGCCACACCCAGAGGATCCCATGTTATGACTCACTGTAATGTCCCTTTCGATTCAAACAAATTATTCACTGTTCTCATTCTACCATTCACGTCCTATGGCATGTTATCGTTTCTTCCATTATTTGTTATTTTAAAGAAGAGTCTAGTTCTACTTATCTCTCTGTATATAAATCATTGATGACGTAGAAATCGTATATAGAAAAGTAGACAGTTGGTTAGAAGAATAAAATGTCGATAGCTACAAGACGAACATTGTAGATTATGAGTGTGACTGTCGATTATGACCCCTTGGTGCCTTATCTAGCTTCTCTTGGGCTTCTGGTTCATCTAGTTACTCTCCATGTAGGGTACAAGTACTTTTTCATGCTCTATATGTCCATGTCCCTGTCCATGTTTAGGAGCATGTGATGATGAGGGATCAACCTCAAAAGCATAATATAGTGGAGTATGAAGATATCATGAATCAACACGGGATCGGTTTCTCCAACTTTGGAGAAGTTTTGATCTCACGTCAAACACTTTTGGTACAACTTGTTTCATGCCTAATTGTCTCATTACTCTGTTGGATATATGCTAATCAACAACATGAAAGCATATGGGAAAACTTACCGTACACTAGATATCATGACCGTTTCTACATTAATTAGGTAATGTCGTGATGGCATCGATATGAAGCTTCCAAATACAATCCTTAGAACCCTTAGAGATCAAACCAATTTAGATCAAGGACAGAAAGATAAGAAAACTTAATATTCTTACCTCAACATTGCCCAATTCAGCCAATCCATACTGCCCGTAGTTCCTCCCATTGTTTATCAACGAGCATAGACAGATTGGGGATAGGAGACTGGTGTGTGGACCAGTGGTGGGGATTTGGAAAACTTCTTTAGAAGTTAATGATTAGAGACGAATGGGGTGTAGGGTCTGTGTAGCGTGAGTGCATGTGTGACTTGAGTACTGTCCTTGGGCGAGATGCTGCTATTGAATCCCTCTTTTATGCTAGAGTTGTCATCATCTCATCATCTTCACAACCAACACCCGACTTCTAATAATACCCGACCATATAAACATCGATACGTTATATAGTCTCTCTTTCATGTAGATACGCTATCCCTTCTGTCTCTCCTTGGAGTATATAGATCCACCCAATCAATGAACAAAAGAACAACAAACGGGTAAGGAGAAGAGGAGAACAATATCTAGACAAGCCTTGAACCAAACTCGAAAACGAGCTGGGAATAACAGGAAGAGTCTAGGAAAGATTCGACATGGAGTGGAAGTACTTGGTCGCTAGAGTTTCCTTTTCCTCGATCGATTATTTATGTTGTTATAGTTGAAAGATGTTTGTTATAAGGCTCAATCAAGTGTCAACAGTGGAATGCGGAAGACAAACAGACACTTTTAGAAAGTAGCTTTTTTTTTCCCTTTCCAAATGTTAGTTAGATCAGACCCCCTCCTCTCCTCTCCTCTCCTCTCCTCTTTCTTTCCTTCATTTACACCTTTCTCCACTTTTCTCTCTTCCACAGACTCAGTTCAGCCTCCCATTCCAAGCTTCCAAAGATTCAGAAGAAGAAGAAAATGAGTAAAGAAGAAGAAGAAGAAGAATTAGAATTCTCCCCATTAGCTCAGTTTGTGTCTGAAATCTCCCAATTCTTCTCCTTACTTCTCTCACACCCTCTCTATTTCTCTTACTTCCTGTTCTTCTCCCCTTATCTTTTCAGGCTCCTCTCCTTTGTTTCCCCTCTTTTAGCCACCACATTCCTCTTGATCCTCCAGCCCTTTTTCTCCCATACCCACCAAACCCATTTAGATGACCAAACATTCCCTCTCCCTCAGCACCTTGAGTGGTTCAACACTGTCTTCAACGCACCCACTGACATCCCCACAAACCCATTTCCACTTCAAGAACCAGAGATCAACAAACAAGAAGCAAAAGAAGAGGATCATGAGGATGAAGAGAGTAGAGAAAATGGGATTGAAATGGGTAAGAAGAGCTTTTTGGTGGGGTGTAAAGAGTTTGAAGATGATGAGGATAAAATGGATTTGCTTTGGGAAAAGTATGAGGAGAAGGACGAAAAGAGCTGCAATTTAAAGAAGGATTTGAGGAGTTTGGTGAATCTTCAAAAGGAAATGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAACTGGGAAAATTTGCTGCTTACAAGCTTTGAAACTTTCGACTGGAAAAATGAGATTTGGAATGGGGAAGAAAAGTGGTTTGAAGAAGATTTCAAAAGCTTTCAAAGGGCTTAAATTGTTGCATCAGCTCGCTACCACTCGTAAGAACAAGACATGAACATCGTTGTGTATTTTTGTTGGTTTTTTTTTTTTTT TGTGCTGGGCGGCCCAATATGGTTCTATAAAAGCTGAAGCATTCGTGTTCGGCGCCTGTTCGCGGCATTTGCGATTGGGATTTATTCAAAAGCTTAGACGCGCAGCAAATTAGGGTTTCGATCTGTGAAAGCTCAAAATTCATCACCGAGATCGATCATGATTTACGACGTTAACTCCCCTCTCTTCCGCTCCTTCCTCAGCCAGAGAGGAGGCCCTTCCGACAGGAAAATGGAGCAGAAGCCGAAAGAACAGAGACCGAAAGCCAGTGAGAATAAGCCTGTGGGTGTCAAAGCAAGTGATGAAAGAGAAGTGAAGACCGAAGAGTTTAGAGGTCGATTGATCCGACTCCCAAAAGTTGTGGCGACAAAGCTCGCTCTCCATCGTCTATCTAGCGATGGAGGAAGGAAGTTGTTCTGGCGAGACTAAGAAAGAAAGGGGAGAGAGTTTGAGCCATACAATTTTGACACCAGAAAGGCAGAAACTTTTGCCCCAATTCGAAAGACTCAGTTCAGCCTCCCATTCCAAGCTTCCAAAGATTCAGAAGAAGAAGAAAATGAGTAAAGAAGAAGAAGAAGAAGAATTAGAATTCTCCCCATTAGCTCAGTTTGTGTCTGAAATCTCCCAATTCTTCTCCTTACTTCTCTCACACCCTCTCTATTTCTCTTACTTCCTGTTCTTCTCCCCTTATCTTTTCAGGCTCCTCTCCTTTGTTTCCCCTCTTTTAGCCACCACATTCCTCTTGATCCTCCAGCCCTTTTTCTCCCATACCCACCAAACCCATTTAGATGACCAAACATTCCCTCTCCCTCAGCACCTTGAGTGGTTCAACACTGTCTTCAACGCACCCACTGACATCCCCACAAACCCATTTCCACTTCAAGAACCAGAGATCAACAAACAAGAAGCAAAAGAAGAGGATCATGAGGATGAAGAGAGTAGAGAAAATGGGATTGAAATGGGTAAGAAGAGCTTTTTGGTGGGGTGTAAAGAGTTTGAAGATGATGAGGATAAAATGGATTTGCTTTGGGAAAAGTATGAGGAGAAGGACGAAAAGAGCTGCAATTTAAAGAAGGATTTGAGGAGTTTGGTGAATCTTCAAAAGGAAATGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAACTGGGAAAATTTGCTGCTTACAAGCTTTGAAACTTTCGACTGGAAAAATGAGATTTGGAATGGGGAAGAAAAGTGGTTTGAAGAAGATTTCAAAAGCTTTCAAAGGGCTTAAATTGTTGCATCAGCTCGCTACCACTCGTAAGAACAAGACATGAACATCGTTGTGTATTTTTGTTGGTTTTTTTTTTTTTT ATGGAGGAAGGAAGTTGTTCTGGCGAGACTAAGAAAGAAAGGGGAGAGAGTTTGAGCCATACAATTTTGACACCAGAAAGGCAGAAACTTTTGCCCCAATTCGAAAGACTCAGTTCAGCCTCCCATTCCAAGCTTCCAAAGATTCAGAAGAAGAAGAAAATGAGTAAAGAAGAAGAAGAAGAAGAATTAGAATTCTCCCCATTAGCTCAGTTTGTGTCTGAAATCTCCCAATTCTTCTCCTTACTTCTCTCACACCCTCTCTATTTCTCTTACTTCCTGTTCTTCTCCCCTTATCTTTTCAGGCTCCTCTCCTTTGTTTCCCCTCTTTTAGCCACCACATTCCTCTTGATCCTCCAGCCCTTTTTCTCCCATACCCACCAAACCCATTTAGATGACCAAACATTCCCTCTCCCTCAGCACCTTGAGTGGTTCAACACTGTCTTCAACGCACCCACTGACATCCCCACAAACCCATTTCCACTTCAAGAACCAGAGATCAACAAACAAGAAGCAAAAGAAGAGGATCATGAGGATGAAGAGAGTAGAGAAAATGGGATTGAAATGGGTAAGAAGAGCTTTTTGGTGGGGTGTAAAGAGTTTGAAGATGATGAGGATAAAATGGATTTGCTTTGGGAAAAGTATGAGGAGAAGGACGAAAAGAGCTGCAATTTAAAGAAGGATTTGAGGAGTTTGGTGAATCTTCAAAAGGAAATGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAACTGGGAAAATTTGCTGCTTACAAGCTTTGAAACTTTCGACTGGAAAAATGAGATTTGGAATGGGGAAGAAAAGTGGTTTGAAGAAGATTTCAAAAGCTTTCAAAGGGCTTAAATTGTTGCATCAGCTCGCTACCACTCGTAAGAACAAGACATGA MEEGSCSGETKKERGESLSHTILTPERQKLLPQFERLSSASHSKLPKIQKKKKMSKEEEEEELEFSPLAQFVSEISQFFSLLLSHPLYFSYFLFFSPYLFRLLSFVSPLLATTFLLILQPFFSHTHQTHLDDQTFPLPQHLEWFNTVFNAPTDIPTNPFPLQEPEINKQEAKEEDHEDEESRENGIEMGKKSFLVGCKEFEDDEDKMDLLWEKYEEKDEKSCNLKKDLRSLVNLQKEMEEEEEEEEEEEEETGKICCLQALKLSTGKMRFGMGKKSGLKKISKAFKGLKLLHQLATTRKNKT Homology
BLAST of Cp4.1LG17g11240 vs. NCBI nr
Match: XP_023513792.1 (uncharacterized protein LOC111778295 [Cucurbita pepo subsp. pepo] >XP_023513794.1 uncharacterized protein LOC111778295 [Cucurbita pepo subsp. pepo] >XP_023513795.1 uncharacterized protein LOC111778295 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 565 bits (1456), Expect = 1.88e-202 Identity = 302/302 (100.00%), Postives = 302/302 (100.00%), Query Frame = 0
BLAST of Cp4.1LG17g11240 vs. NCBI nr
Match: XP_023004158.1 (uncharacterized protein LOC111497570 [Cucurbita maxima] >XP_023004159.1 uncharacterized protein LOC111497570 [Cucurbita maxima]) HSP 1 Score: 529 bits (1362), Expect = 3.19e-188 Identity = 287/302 (95.03%), Postives = 289/302 (95.70%), Query Frame = 0
BLAST of Cp4.1LG17g11240 vs. NCBI nr
Match: KAG6593013.1 (hypothetical protein SDJN03_12489, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 449 bits (1154), Expect = 3.00e-157 Identity = 242/251 (96.41%), Postives = 245/251 (97.61%), Query Frame = 0
BLAST of Cp4.1LG17g11240 vs. NCBI nr
Match: KAG7025422.1 (hypothetical protein SDJN02_11917, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 446 bits (1148), Expect = 2.65e-156 Identity = 243/253 (96.05%), Postives = 246/253 (97.23%), Query Frame = 0
BLAST of Cp4.1LG17g11240 vs. NCBI nr
Match: XP_022960018.1 (uncharacterized protein LOC111460896 isoform X1 [Cucurbita moschata] >XP_022960019.1 uncharacterized protein LOC111460896 isoform X1 [Cucurbita moschata] >XP_022960020.1 uncharacterized protein LOC111460896 isoform X1 [Cucurbita moschata]) HSP 1 Score: 437 bits (1123), Expect = 1.27e-152 Identity = 237/249 (95.18%), Postives = 240/249 (96.39%), Query Frame = 0
BLAST of Cp4.1LG17g11240 vs. ExPASy TrEMBL
Match: A0A6J1KYN7 (uncharacterized protein LOC111497570 OS=Cucurbita maxima OX=3661 GN=LOC111497570 PE=4 SV=1) HSP 1 Score: 529 bits (1362), Expect = 1.54e-188 Identity = 287/302 (95.03%), Postives = 289/302 (95.70%), Query Frame = 0
BLAST of Cp4.1LG17g11240 vs. ExPASy TrEMBL
Match: A0A6J1H9Q5 (uncharacterized protein LOC111460896 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460896 PE=4 SV=1) HSP 1 Score: 437 bits (1123), Expect = 6.16e-153 Identity = 237/249 (95.18%), Postives = 240/249 (96.39%), Query Frame = 0
BLAST of Cp4.1LG17g11240 vs. ExPASy TrEMBL
Match: A0A0A0K4L5 (Genomic DNA, chromosome 3, P1 clone: MJL12 OS=Cucumis sativus OX=3659 GN=Csa_7G352430 PE=4 SV=1) HSP 1 Score: 217 bits (553), Expect = 4.95e-66 Identity = 154/279 (55.20%), Postives = 182/279 (65.23%), Query Frame = 0
BLAST of Cp4.1LG17g11240 vs. ExPASy TrEMBL
Match: A0A1S4E1X2 (uncharacterized protein LOC107991592 OS=Cucumis melo OX=3656 GN=LOC107991592 PE=4 SV=1) HSP 1 Score: 213 bits (543), Expect = 1.36e-64 Identity = 154/279 (55.20%), Postives = 180/279 (64.52%), Query Frame = 0
BLAST of Cp4.1LG17g11240 vs. ExPASy TrEMBL
Match: A0A6J1DVV3 (uncharacterized protein LOC111023976 OS=Momordica charantia OX=3673 GN=LOC111023976 PE=4 SV=1) HSP 1 Score: 148 bits (374), Expect = 1.64e-39 Identity = 119/247 (48.18%), Postives = 139/247 (56.28%), Query Frame = 0
BLAST of Cp4.1LG17g11240 vs. TAIR 10
Match: AT3G25130.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; Has 3885 Blast hits to 2658 proteins in 280 species: Archae - 12; Bacteria - 208; Metazoa - 970; Fungi - 222; Plants - 148; Viruses - 11; Other Eukaryotes - 2314 (source: NCBI BLink). ) HSP 1 Score: 54.7 bits (130), Expect = 1.5e-07 Identity = 95/387 (24.55%), Postives = 150/387 (38.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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