Cp4.1LG17g10620 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG17g10620
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Squamosa promoter-binding-like protein 16
Location	Cp4.1LG17: 8083301 .. 8086452 (+)
RNA-Seq Expression	Cp4.1LG17g10620
Synteny	Cp4.1LG17g10620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGTTTTTTTTTTTTTTCTCTTTTACTCAACAGATTTTCCCCTTCTCTCCCACCAAAATCCCATGGATTTGGGTCTCTAAACAATACAATGCTCAACACTTCCAAAATACCCATTTCCAACTACATTATCCACTCTTCCCAATTTCTCAGTCTAATTTCTTCCTTCTTTTGCTTTCTCTAACTCTTCATCCGCCCAAATCCGATTCCCTTTTGGTTTTTGAACCCGTTTCTCATCTTTCTCTTTCTTCAGTTCTTCCTCTTTCAGCTTCCTCAGGTTGAAGTTGGAGCTTCACTTGTGAGTTTCTTCTAATTTATTCCTGTTTTTGTTTGTTTTTGTGTGAATGCAATTTATAGGGATTGAAATTAGTTTATCATGATTTGATGATGCTGCATAATTGGGTTTCTGTTGGAATTTGCTGTAGTTCTGGATTTTGATCTTGGTGATAATGAGCTACTTTCTTTATATTTCTTACAAAATTTGAGCATAGATCTTAGAGAATTGTGACTGAAGTGGATAGTTCATGTTGATGGGCCATATTCCTCGTCTTTTTGCAGCCTAAAATTTGATCTAGTTGAGGAAATTTTGATAGTACTGATTGTATTACTTGTTTGTGTTGTATCCTTCCTATTGCTGCTCAATCGAGTTCGTTCATCGTTCATCGTTCATCGTCTGGTTTCTTACTCTTATTGATGGAAATTTGTATTGGGAATCGGTGTTGTTTAGAGAAAAGGAAAACGTTCAAAAAAATTTAGTATAGAAGGAAACTGAGAGTGTGTTGGAGTAGAGGAAGTTGGTTGATGTATTTGAGACTCAGGGGCATTGGTCATATGGGGGAAGGATCAATGGATGACATGGAAGGAACTAGAGTTACTTTGATCGAGTCGTCGTCATCGTCTTCGAGATTAACGAAGAGGTCACGTACCCCTTATAACGGACCCCAAGTTCCTTCATGTATGGTTGATGGCTGCAGTTCAGACCTTAGCAAGTGCAGGGACTATCATCGTCGCCATAAAGTGTGCGAGTTCCATTCTAAAACACCGAAAGTAACCATTTGCGGTCGGGAACAACGATTCTGCCAGCAATGTAGCAGGTGTGTTGGAATGTTTAGAACATCAATATGCTGCAATTTTCTTCATTGATTCAGCCTTCTTATGGTTTTCTTTTCTGATCATTAGAATTCAAGTTATGCAGATGGGATATACTTTTAGGCTGTTCGTTTTTTTCTACGCCCTTCCTGAAAAGTGTTTTTGAGCTTATGATATGTAGTATAGTCGATACGGTTTCGTTGTGACAGTGCATTAATGAAAGTGCGTGAGCTCAAACCCACCGCTTGTTGATATTGTCCGCTTTGGCCCATTACGTATCGCCGTTAGCCTCACGGTTTTAAAATGCATATGATAAAGAGAGGTTAATAGTGATACGTAACGAGCCAAAGCGGACAATATATGCTAGTTGTGGGTTTGGGCTATTACAAATGGTATCAGAGCCAGTCACCGGGTGTTGTGCCAATGAGGACGTTGGGCACCCAAGGGGGTGGATTGTGAGATCCCATCTCGGTTGGAGAGGAGAACGAACCATTCCTTATAAGGGTGTGGAAACCTTTCCCTAGTAGACGCATTTTAAAACTGTGAGACTGACGGCGATACATAACGGGCCAAAGCGGACAACATCTGCTAGCGGTGGGATTGGGTTATTACAAATGGTATTAGAGCTAGACAACGGGCGGTGTGCCAGCAAGGACGTTGGGCTCCCAATGGGGGTGAATTGTGAGATCTCACATTGGTTGGAGAGGGGAACGAAATATTCCTTATAGGTGTGGAAATCTTTCCCTAGTAGACGCGTTTTAAAATCGTGAGGCTGATAGTGATACGTAACGGGACGAAGCAGCGGTGGGCTTGGGTTGTTACAGTGGGTGGGATAAGCTCTCTTCTTTTACTCTATTTCACTACCTCGAGTTTGTGCTTGCATTTGTTTTCTGTTGTAACATGTTCAAGGCGTGCTCGTATCTTTACTCCTCGGACCCCGGACGCGAATCTTAAACAGATTGGATCGAGAAACACAGGCGGATTCCCGTAATCTATTTGCTTTTTTACCAGATAGTTGAATAAGTATTGGAAGCAAATCTTTGTGGGACTTGCATTTTATATGTTTCTTTTACTTCTTACTTTTGTCTGGTTGGTTCTGTTCTTGGTATTCATTTCAGTTCAATTACACATGTTCTTGTAGATTCCATTCTCTGGTGGAGTTTGATGATCGAAAACGAAGCTGTAGGAAACGTCTTGATGGGCACAACCGACGTCGAAGAAAGCCTCAACCTGCAACGATAATGCTTAATGCAGGACGATTTCTCTATAGCAACCAAGGTTAGTAATATCAATTTAGGCATTCTCTTCCACGCTTGCATGTTTCGTCATCGAATGACTTGCTTGGACAGGTCCAAGATTCTTACCATTTGGTAACCAGTTACTGTCTGCTAGCAATGATTTGAGCTCATCTTGGGTCGGAACGATCAAGCCCGAGCATAACGACGCTCTTTGCAGCAGCAACTCACAGCTCGACGATGCTGACAGAAGAAAAAGTATGTTTCCAGGGTTGTCGGGCTGTGATTACAAAGAAAAACAGCCACCATTTCTCAATGTTGGATCCAACAACGTTGGGAATGTTCAGAAAGTGATGGGAAATGGCTGTGCTCTCTCTCTTCTGTCAACACCAGTTGAGGCTGGGGAGATTAATAATCTAACCTCCATGGTCCAATCCAACCTCATCCCCTCATCCCATTTCATCCATAACGATGGTCTTGGCTTCGAGAGTGACCTCGTTAGTCCTCGTTTGGCCTCGGACGGTAGCAGCGATGCCAACATCCGGTGCTACTCGATGTTCGAGGACGGACCTGATGGATCATCCATAGATTTATTCAGGTTTTGAAACATGGAAGAAGAGGGCTCATTCTTCTTGGTTCTGAAATAGATCTAATCTAATATGGCTTATTCTCCTCAGAATTCAACCTTCCACTCTCTGGTTGCTTCTTTGTTTTTTTGTTCGGGGAGTTTAAGGAATGCTTTTGTGTTGTCTGTGAAATGTCTCTTAAAAATGTTTTAACTTTGTTCAGACTTCAGATTTTGAATATTAATCTTCAGCCTCTATTTAGTT

mRNA sequence

TTTGTTTTTTTTTTTTTTCTCTTTTACTCAACAGATTTTCCCCTTCTCTCCCACCAAAATCCCATGGATTTGGGTCTCTAAACAATACAATGCTCAACACTTCCAAAATACCCATTTCCAACTACATTATCCACTCTTCCCAATTTCTCAGTCTAATTTCTTCCTTCTTTTGCTTTCTCTAACTCTTCATCCGCCCAAATCCGATTCCCTTTTGGTTTTTGAACCCGTTTCTCATCTTTCTCTTTCTTCAGTTCTTCCTCTTTCAGCTTCCTCAGGTTGAAGTTGGAGCTTCACTTAGAAAAGGAAAACGTTCAAAAAAATTTAGTATAGAAGGAAACTGAGAGTGTGTTGGAGTAGAGGAAGTTGGTTGATGTATTTGAGACTCAGGGGCATTGGTCATATGGGGGAAGGATCAATGGATGACATGGAAGGAACTAGAGTTACTTTGATCGAGTCGTCGTCATCGTCTTCGAGATTAACGAAGAGGTCACGTACCCCTTATAACGGACCCCAAGTTCCTTCATGTATGGTTGATGGCTGCAGTTCAGACCTTAGCAAGTGCAGGGACTATCATCGTCGCCATAAAGTGTGCGAGTTCCATTCTAAAACACCGAAAGTAACCATTTGCGGTCGGGAACAACGATTCTGCCAGCAATGTAGCAGATTCCATTCTCTGGTGGAGTTTGATGATCGAAAACGAAGCTGTAGGAAACGTCTTGATGGGCACAACCGACGTCGAAGAAAGCCTCAACCTGCAACGATAATGCTTAATGCAGGACGATTTCTCTATAGCAACCAAGGTCCAAGATTCTTACCATTTGGTAACCAGTTACTGTCTGCTAGCAATGATTTGAGCTCATCTTGGGTCGGAACGATCAAGCCCGAGCATAACGACGCTCTTTGCAGCAGCAACTCACAGCTCGACGATGCTGACAGAAGAAAAAGTATGTTTCCAGGGTTGTCGGGCTGTGATTACAAAGAAAAACAGCCACCATTTCTCAATGTTGGATCCAACAACGTTGGGAATGTTCAGAAAGTGATGGGAAATGGCTGTGCTCTCTCTCTTCTGTCAACACCAGTTGAGGCTGGGGAGATTAATAATCTAACCTCCATGGTCCAATCCAACCTCATCCCCTCATCCCATTTCATCCATAACGATGGTCTTGGCTTCGAGAGTGACCTCGTTAGTCCTCGTTTGGCCTCGGACGGTAGCAGCGATGCCAACATCCGGTGCTACTCGATGTTCGAGGACGGACCTGATGGATCATCCATAGATTTATTCAGGTTTTGAAACATGGAAGAAGAGGGCTCATTCTTCTTGGTTCTGAAATAGATCTAATCTAATATGGCTTATTCTCCTCAGAATTCAACCTTCCACTCTCTGGTTGCTTCTTTGTTTTTTTGTTCGGGGAGTTTAAGGAATGCTTTTGTGTTGTCTGTGAAATGTCTCTTAAAAATGTTTTAACTTTGTTCAGACTTCAGATTTTGAATATTAATCTTCAGCCTCTATTTAGTT

Coding sequence (CDS)

ATGTATTTGAGACTCAGGGGCATTGGTCATATGGGGGAAGGATCAATGGATGACATGGAAGGAACTAGAGTTACTTTGATCGAGTCGTCGTCATCGTCTTCGAGATTAACGAAGAGGTCACGTACCCCTTATAACGGACCCCAAGTTCCTTCATGTATGGTTGATGGCTGCAGTTCAGACCTTAGCAAGTGCAGGGACTATCATCGTCGCCATAAAGTGTGCGAGTTCCATTCTAAAACACCGAAAGTAACCATTTGCGGTCGGGAACAACGATTCTGCCAGCAATGTAGCAGATTCCATTCTCTGGTGGAGTTTGATGATCGAAAACGAAGCTGTAGGAAACGTCTTGATGGGCACAACCGACGTCGAAGAAAGCCTCAACCTGCAACGATAATGCTTAATGCAGGACGATTTCTCTATAGCAACCAAGGTCCAAGATTCTTACCATTTGGTAACCAGTTACTGTCTGCTAGCAATGATTTGAGCTCATCTTGGGTCGGAACGATCAAGCCCGAGCATAACGACGCTCTTTGCAGCAGCAACTCACAGCTCGACGATGCTGACAGAAGAAAAAGTATGTTTCCAGGGTTGTCGGGCTGTGATTACAAAGAAAAACAGCCACCATTTCTCAATGTTGGATCCAACAACGTTGGGAATGTTCAGAAAGTGATGGGAAATGGCTGTGCTCTCTCTCTTCTGTCAACACCAGTTGAGGCTGGGGAGATTAATAATCTAACCTCCATGGTCCAATCCAACCTCATCCCCTCATCCCATTTCATCCATAACGATGGTCTTGGCTTCGAGAGTGACCTCGTTAGTCCTCGTTTGGCCTCGGACGGTAGCAGCGATGCCAACATCCGGTGCTACTCGATGTTCGAGGACGGACCTGATGGATCATCCATAGATTTATTCAGGTTTTGA

Protein sequence

MYLRLRGIGHMGEGSMDDMEGTRVTLIESSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATIMLNAGRFLYSNQGPRFLPFGNQLLSASNDLSSSWVGTIKPEHNDALCSSNSQLDDADRRKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVMGNGCALSLLSTPVEAGEINNLTSMVQSNLIPSSHFIHNDGLGFESDLVSPRLASDGSSDANIRCYSMFEDGPDGSSIDLFRF

Homology

[Close]

BLAST of Cp4.1LG17g10620 vs. ExPASy Swiss-Prot
Match: Q6YZE8 (Squamosa promoter-binding-like protein 16 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL16 PE=2 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 3.0e-40
Identity = 94/190 (49.47%), Postives = 111/190 (58.42%), Query Frame = 0


Query: 29  SSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHRRHKVCEFHSKTPKVTICGR 88
           ++SS+     R        Q PSC VDGC  DLSKCRDYHRRHKVCE HSKTP V + GR
Sbjct: 95  AASSAPAKRPRGAAAAGQQQCPSCAVDGCKEDLSKCRDYHRRHKVCEAHSKTPLVVVSGR 154

Query: 89  EQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATIMLNAGRFLYSNQGPRFL 148
           E RFCQQCSRFH L EFD+ KRSCRKRLDGHNRRRRKPQP    +N+  +L S QG RF 
Sbjct: 155 EMRFCQQCSRFHLLQEFDEAKRSCRKRLDGHNRRRRKPQPDP--MNSASYLASQQGARFS 214

Query: 149 PFGNQLLSASNDLSSSWVGTIKPEHNDALCSSNSQLDDADRRKSMFPGLSGCDYKEKQPP 208
           PF      A+    +SW G IK E +         L  + R++      S      ++ P
Sbjct: 215 PF------ATPRPEASWTGMIKTEESPYYTHHQIPLGISSRQQHFVGSTSD---GGRRFP 273

Query: 209 FLNVGSNNVG 219
           FL  G  + G
Sbjct: 275 FLQEGEISFG 273

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BLAST of Cp4.1LG17g10620 vs. ExPASy Swiss-Prot
Match: Q49I57 (Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=3 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 9.6e-39
Identity = 113/280 (40.36%), Postives = 138/280 (49.29%), Query Frame = 0


Query: 48  QVPSCMVDGCSSDLSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDD 107
           Q PSC VDGC +DL KCRDYHRRHKVCE HSKTP V + GRE RFCQQCSRFH L EFD 
Sbjct: 101 QCPSCAVDGCRADLGKCRDYHRRHKVCEAHSKTPVVVVAGREMRFCQQCSRFHLLAEFDA 160

Query: 108 RKRSCRKRLDGHNRRRRKPQPATIMLNAGRFLYSNQGPRFLPFGNQLLSASNDLSSSW-V 167
            KRSCRKRLDGHNRRRRKPQP T  + +  F+ S QG RF PF +  L A      SW  
Sbjct: 161 DKRSCRKRLDGHNRRRRKPQPDT--MASASFIASQQGTRFSPFAHPRLEA------SWPP 220

Query: 168 GTIKPEHNDALCSSNSQL-DDADRRKSMFPGLSGCD----YKEKQPPFLNVG-------- 227
           G +K E +    +    L   +  R+  F  L         + ++ PFL  G        
Sbjct: 221 GVMKTEESPYHITHQIPLGSSSSSRQQHFVALGAATPAYAKEGRRFPFLQEGEISFATGV 280

Query: 228 ----------------------SNNVG--------NVQKVMGNGCALSLLSTPVEAGEIN 283
                                 S+  G         + +V+ + CALSLLS P  +  I+
Sbjct: 281 VLEPPAAAPACQPLLRTGAPSESSGAGGSKMFSDQGLARVLDSDCALSLLSAPANSSGID 340

[Close]

BLAST of Cp4.1LG17g10620 vs. ExPASy Swiss-Prot
Match: Q49I55 (Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=1 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 9.6e-39
Identity = 113/280 (40.36%), Postives = 138/280 (49.29%), Query Frame = 0


Query: 48  QVPSCMVDGCSSDLSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDD 107
           Q PSC VDGC +DL KCRDYHRRHKVCE HSKTP V + GRE RFCQQCSRFH L EFD 
Sbjct: 100 QCPSCAVDGCRADLGKCRDYHRRHKVCEAHSKTPVVVVAGREMRFCQQCSRFHLLAEFDA 159

Query: 108 RKRSCRKRLDGHNRRRRKPQPATIMLNAGRFLYSNQGPRFLPFGNQLLSASNDLSSSW-V 167
            KRSCRKRLDGHNRRRRKPQP T  + +  F+ S QG RF PF +  L A      SW  
Sbjct: 160 DKRSCRKRLDGHNRRRRKPQPDT--MASASFIASQQGTRFSPFAHPRLEA------SWPP 219

Query: 168 GTIKPEHNDALCSSNSQL-DDADRRKSMFPGLSGCD----YKEKQPPFLNVG-------- 227
           G +K E +    +    L   +  R+  F  L         + ++ PFL  G        
Sbjct: 220 GVMKTEESPYHITHQIPLGSSSSSRQQHFVALGAATPAYAKEGRRFPFLQEGEISFATGV 279

Query: 228 ----------------------SNNVG--------NVQKVMGNGCALSLLSTPVEAGEIN 283
                                 S+  G         + +V+ + CALSLLS P  +  I+
Sbjct: 280 VLEPPAAAPACQPLLRTGAPSESSGAGGSKMFSDQGLARVLDSDCALSLLSAPANSSGID 339

[Close]

BLAST of Cp4.1LG17g10620 vs. ExPASy Swiss-Prot
Match: B9DI20 (Squamosa promoter-binding-like protein 13A OS=Arabidopsis thaliana OX=3702 GN=SPL13A PE=1 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 5.3e-37
Identity = 102/224 (45.54%), Postives = 130/224 (58.04%), Query Frame = 0


Query: 29  SSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHRRHKVCEFHSKTPKVTICGR 88
           S SSSS+ T+ +    N  Q+P C+VDGC SD S CR+YH+RHKVC+ HSKTP VTI G 
Sbjct: 80  SRSSSSKRTRGNGVGTN--QMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGH 139

Query: 89  EQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATIMLNAGRFLYSNQGPRFL 148
           +QRFCQQCSRFH+L EFD+ KRSCRKRLDGHNRRRRKPQP  I   A  F    QG + L
Sbjct: 140 KQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHIGRPA-NFFTGFQGSKLL 199

Query: 149 PF--GNQLLSASNDLSSSW----VGTIKPEHNDALCSSNSQLDDADRRKS--MFPGLSGC 208
            F  G+ +   ++ L+ SW    V      +  +   S S +  +   K+  MFP  S  
Sbjct: 200 EFSGGSHVFPTTSVLNPSWGNSLVSVAVAANGSSYGQSQSYVVGSSPAKTGIMFPISSSP 259

Query: 209 DYKE---KQPPFL--NVGSNNVGNVQK----VMGNGCALSLLST 236
           +      KQ PFL     S      ++    +  + CALSLLS+
Sbjct: 260 NSTRSIAKQFPFLQEEESSRTASLCERMTSCIHDSDCALSLLSS 300

[Close]

BLAST of Cp4.1LG17g10620 vs. ExPASy Swiss-Prot
Match: P0DI11 (Squamosa promoter-binding-like protein 13B OS=Arabidopsis thaliana OX=3702 GN=SPL13B PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 5.3e-37
Identity = 102/224 (45.54%), Postives = 130/224 (58.04%), Query Frame = 0


Query: 29  SSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHRRHKVCEFHSKTPKVTICGR 88
           S SSSS+ T+ +    N  Q+P C+VDGC SD S CR+YH+RHKVC+ HSKTP VTI G 
Sbjct: 80  SRSSSSKRTRGNGVGTN--QMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGH 139

Query: 89  EQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATIMLNAGRFLYSNQGPRFL 148
           +QRFCQQCSRFH+L EFD+ KRSCRKRLDGHNRRRRKPQP  I   A  F    QG + L
Sbjct: 140 KQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHIGRPA-NFFTGFQGSKLL 199

Query: 149 PF--GNQLLSASNDLSSSW----VGTIKPEHNDALCSSNSQLDDADRRKS--MFPGLSGC 208
            F  G+ +   ++ L+ SW    V      +  +   S S +  +   K+  MFP  S  
Sbjct: 200 EFSGGSHVFPTTSVLNPSWGNSLVSVAVAANGSSYGQSQSYVVGSSPAKTGIMFPISSSP 259

Query: 209 DYKE---KQPPFL--NVGSNNVGNVQK----VMGNGCALSLLST 236
           +      KQ PFL     S      ++    +  + CALSLLS+
Sbjct: 260 NSTRSIAKQFPFLQEEESSRTASLCERMTSCIHDSDCALSLLSS 300

[Close]

BLAST of Cp4.1LG17g10620 vs. NCBI nr
Match: XP_023513759.1 (squamosa promoter-binding-like protein 16 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023513760.1 squamosa promoter-binding-like protein 16 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023513761.1 squamosa promoter-binding-like protein 16 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 630 bits (1625), Expect = 4.43e-228
Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0


Query: 1   MYLRLRGIGHMGEGSMDDMEGTRVTLIESSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSD 60
           MYLRLRGIGHMGEGSMDDMEGTRVTLIESSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSD
Sbjct: 1   MYLRLRGIGHMGEGSMDDMEGTRVTLIESSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSD 60

Query: 61  LSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHN 120
           LSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHN
Sbjct: 61  LSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHN 120

Query: 121 RRRRKPQPATIMLNAGRFLYSNQGPRFLPFGNQLLSASNDLSSSWVGTIKPEHNDALCSS 180
           RRRRKPQPATIMLNAGRFLYSNQGPRFLPFGNQLLSASNDLSSSWVGTIKPEHNDALCSS
Sbjct: 121 RRRRKPQPATIMLNAGRFLYSNQGPRFLPFGNQLLSASNDLSSSWVGTIKPEHNDALCSS 180

Query: 181 NSQLDDADRRKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVMGNGCALSLLSTPVEAG 240
           NSQLDDADRRKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVMGNGCALSLLSTPVEAG
Sbjct: 181 NSQLDDADRRKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVMGNGCALSLLSTPVEAG 240

Query: 241 EINNLTSMVQSNLIPSSHFIHNDGLGFESDLVSPRLASDGSSDANIRCYSMFEDGPDGSS 300
           EINNLTSMVQSNLIPSSHFIHNDGLGFESDLVSPRLASDGSSDANIRCYSMFEDGPDGSS
Sbjct: 241 EINNLTSMVQSNLIPSSHFIHNDGLGFESDLVSPRLASDGSSDANIRCYSMFEDGPDGSS 300

Query: 301 IDLFRF 306
           IDLFRF
Sbjct: 301 IDLFRF 306

[Close]

BLAST of Cp4.1LG17g10620 vs. NCBI nr
Match: XP_023513762.1 (squamosa promoter-binding-like protein 16 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 609 bits (1570), Expect = 7.41e-220
Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 0


Query: 11  MGEGSMDDMEGTRVTLIESSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHRR 70
           MGEGSMDDMEGTRVTLIESSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHRR
Sbjct: 1   MGEGSMDDMEGTRVTLIESSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHRR 60

Query: 71  HKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPAT 130
           HKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPAT
Sbjct: 61  HKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPAT 120

Query: 131 IMLNAGRFLYSNQGPRFLPFGNQLLSASNDLSSSWVGTIKPEHNDALCSSNSQLDDADRR 190
           IMLNAGRFLYSNQGPRFLPFGNQLLSASNDLSSSWVGTIKPEHNDALCSSNSQLDDADRR
Sbjct: 121 IMLNAGRFLYSNQGPRFLPFGNQLLSASNDLSSSWVGTIKPEHNDALCSSNSQLDDADRR 180

Query: 191 KSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVMGNGCALSLLSTPVEAGEINNLTSMVQ 250
           KSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVMGNGCALSLLSTPVEAGEINNLTSMVQ
Sbjct: 181 KSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVMGNGCALSLLSTPVEAGEINNLTSMVQ 240

Query: 251 SNLIPSSHFIHNDGLGFESDLVSPRLASDGSSDANIRCYSMFEDGPDGSSIDLFRF 306
           SNLIPSSHFIHNDGLGFESDLVSPRLASDGSSDANIRCYSMFEDGPDGSSIDLFRF
Sbjct: 241 SNLIPSSHFIHNDGLGFESDLVSPRLASDGSSDANIRCYSMFEDGPDGSSIDLFRF 296

[Close]

BLAST of Cp4.1LG17g10620 vs. NCBI nr
Match: XP_022959621.1 (squamosa promoter-binding-like protein 16 isoform X1 [Cucurbita moschata] >XP_022959622.1 squamosa promoter-binding-like protein 16 isoform X1 [Cucurbita moschata])

HSP 1 Score: 607 bits (1565), Expect = 6.46e-219
Identity = 295/307 (96.09%), Postives = 300/307 (97.72%), Query Frame = 0


Query: 1   MYLRLRGIGHMGEGSMDDMEGTRVTLIES-SSSSSRLTKRSRTPYNGPQVPSCMVDGCSS 60
           MYLRLRGIGHMGEGSMDD+EGTRVTLIES SSSSSRLTKRSRTPYNGPQVPSCMVDGCSS
Sbjct: 1   MYLRLRGIGHMGEGSMDDIEGTRVTLIESLSSSSSRLTKRSRTPYNGPQVPSCMVDGCSS 60

Query: 61  DLSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGH 120
           DLSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGH
Sbjct: 61  DLSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGH 120

Query: 121 NRRRRKPQPATIMLNAGRFLYSNQGPRFLPFGNQLLSASNDLSSSWVGTIKPEHNDALCS 180
           NRRRRKPQPATI LNAGRFLYSNQGPRFLPFGNQLLS  NDLSSSW+G IKPEHNDALCS
Sbjct: 121 NRRRRKPQPATITLNAGRFLYSNQGPRFLPFGNQLLSTGNDLSSSWIGMIKPEHNDALCS 180

Query: 181 SNSQLDDADRRKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVMGNGCALSLLSTPVEA 240
           SNSQLD ADRRKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKV+GNGCALSLLSTPVEA
Sbjct: 181 SNSQLDIADRRKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVVGNGCALSLLSTPVEA 240

Query: 241 GEINNLTSMVQSNLIPSSHFIHNDGLGFESDLVSPRLASDGSSDANIRCYSMFEDGPDGS 300
           GEINNLTSMVQSNLIPSSHF+H+DGLGFESDLVSPRL SDGSSDANIRCYSMFEDGPDGS
Sbjct: 241 GEINNLTSMVQSNLIPSSHFVHSDGLGFESDLVSPRLVSDGSSDANIRCYSMFEDGPDGS 300

Query: 301 SIDLFRF 306
           SIDLFRF
Sbjct: 301 SIDLFRF 307

[Close]

BLAST of Cp4.1LG17g10620 vs. NCBI nr
Match: XP_023004220.1 (squamosa promoter-binding-like protein 16 isoform X1 [Cucurbita maxima])

HSP 1 Score: 601 bits (1549), Expect = 1.71e-216
Identity = 292/306 (95.42%), Postives = 296/306 (96.73%), Query Frame = 0


Query: 1   MYLRLRGIGHMGEGSMDDMEGTRVTLIESSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSD 60
           MYLRLRGIGHMGEGSMDD EGTRVTLIES SSS RLTKRSRTPYNGPQVPSCMVDGCSSD
Sbjct: 1   MYLRLRGIGHMGEGSMDDNEGTRVTLIESLSSSLRLTKRSRTPYNGPQVPSCMVDGCSSD 60

Query: 61  LSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHN 120
           LSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHN
Sbjct: 61  LSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHN 120

Query: 121 RRRRKPQPATIMLNAGRFLYSNQGPRFLPFGNQLLSASNDLSSSWVGTIKPEHNDALCSS 180
           RRRRKPQPAT+ LNAGRFLYSNQGPRFLPFGNQLLSA NDLSSSW+GTIKPEHNDALCSS
Sbjct: 121 RRRRKPQPATMTLNAGRFLYSNQGPRFLPFGNQLLSACNDLSSSWIGTIKPEHNDALCSS 180

Query: 181 NSQLDDADRRKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVMGNGCALSLLSTPVEAG 240
           NSQLD ADRRKSMFPGLSGCDYKEKQPPFLNVGS+NVGNVQKV+GNGCALSLLSTPVEAG
Sbjct: 181 NSQLDVADRRKSMFPGLSGCDYKEKQPPFLNVGSSNVGNVQKVVGNGCALSLLSTPVEAG 240

Query: 241 EINNLTSMVQSNLIPSSHFIHNDGLGFESDLVSPRLASDGSSDANIRCYSMFEDGPDGSS 300
           EINNLTSMVQSNLIPSSHF H DGLGFESDLVSPRL SDGSSDANIRCYSMFEDGPDGSS
Sbjct: 241 EINNLTSMVQSNLIPSSHFSHTDGLGFESDLVSPRLVSDGSSDANIRCYSMFEDGPDGSS 300

Query: 301 IDLFRF 306
           IDLF F
Sbjct: 301 IDLFWF 306

[Close]

BLAST of Cp4.1LG17g10620 vs. NCBI nr
Match: KAG6592958.1 (putative DNA primase large subunit, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 609 bits (1571), Expect = 4.52e-211
Identity = 294/306 (96.08%), Postives = 299/306 (97.71%), Query Frame = 0


Query: 1   MYLRLRGIGHMGEGSMDDMEGTRVTLIESSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSD 60
           MYLRLRGIGHMGEGSMDD+EGTRVTLIES SSSSRLTKRSRTPYNGPQVPSCMVDGCSSD
Sbjct: 590 MYLRLRGIGHMGEGSMDDIEGTRVTLIESLSSSSRLTKRSRTPYNGPQVPSCMVDGCSSD 649

Query: 61  LSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHN 120
           LSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHN
Sbjct: 650 LSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHN 709

Query: 121 RRRRKPQPATIMLNAGRFLYSNQGPRFLPFGNQLLSASNDLSSSWVGTIKPEHNDALCSS 180
           RRRRKPQPATI LNAGRFLYSNQGPRFLPFGNQLLS  NDLSSSW+G IKPEHNDALCSS
Sbjct: 710 RRRRKPQPATITLNAGRFLYSNQGPRFLPFGNQLLSTGNDLSSSWIGMIKPEHNDALCSS 769

Query: 181 NSQLDDADRRKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVMGNGCALSLLSTPVEAG 240
           NSQLD ADRRKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKV+GNGCALSLLSTPVEAG
Sbjct: 770 NSQLDIADRRKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVVGNGCALSLLSTPVEAG 829

Query: 241 EINNLTSMVQSNLIPSSHFIHNDGLGFESDLVSPRLASDGSSDANIRCYSMFEDGPDGSS 300
           EINNLTSMVQSNLIPSSHF+H+DGLGFESDLVSPRL SDGSSDANIRCYSMFEDGPDGSS
Sbjct: 830 EINNLTSMVQSNLIPSSHFVHSDGLGFESDLVSPRLVSDGSSDANIRCYSMFEDGPDGSS 889

Query: 301 IDLFRF 306
           IDLFRF
Sbjct: 890 IDLFRF 895

[Close]

BLAST of Cp4.1LG17g10620 vs. ExPASy TrEMBL
Match: A0A6J1H521 (squamosa promoter-binding-like protein 16 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460645 PE=4 SV=1)

HSP 1 Score: 607 bits (1565), Expect = 3.13e-219
Identity = 295/307 (96.09%), Postives = 300/307 (97.72%), Query Frame = 0


Query: 1   MYLRLRGIGHMGEGSMDDMEGTRVTLIES-SSSSSRLTKRSRTPYNGPQVPSCMVDGCSS 60
           MYLRLRGIGHMGEGSMDD+EGTRVTLIES SSSSSRLTKRSRTPYNGPQVPSCMVDGCSS
Sbjct: 1   MYLRLRGIGHMGEGSMDDIEGTRVTLIESLSSSSSRLTKRSRTPYNGPQVPSCMVDGCSS 60

Query: 61  DLSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGH 120
           DLSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGH
Sbjct: 61  DLSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGH 120

Query: 121 NRRRRKPQPATIMLNAGRFLYSNQGPRFLPFGNQLLSASNDLSSSWVGTIKPEHNDALCS 180
           NRRRRKPQPATI LNAGRFLYSNQGPRFLPFGNQLLS  NDLSSSW+G IKPEHNDALCS
Sbjct: 121 NRRRRKPQPATITLNAGRFLYSNQGPRFLPFGNQLLSTGNDLSSSWIGMIKPEHNDALCS 180

Query: 181 SNSQLDDADRRKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVMGNGCALSLLSTPVEA 240
           SNSQLD ADRRKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKV+GNGCALSLLSTPVEA
Sbjct: 181 SNSQLDIADRRKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVVGNGCALSLLSTPVEA 240

Query: 241 GEINNLTSMVQSNLIPSSHFIHNDGLGFESDLVSPRLASDGSSDANIRCYSMFEDGPDGS 300
           GEINNLTSMVQSNLIPSSHF+H+DGLGFESDLVSPRL SDGSSDANIRCYSMFEDGPDGS
Sbjct: 241 GEINNLTSMVQSNLIPSSHFVHSDGLGFESDLVSPRLVSDGSSDANIRCYSMFEDGPDGS 300

Query: 301 SIDLFRF 306
           SIDLFRF
Sbjct: 301 SIDLFRF 307

[Close]

BLAST of Cp4.1LG17g10620 vs. ExPASy TrEMBL
Match: A0A6J1KTZ2 (squamosa promoter-binding-like protein 16 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497618 PE=4 SV=1)

HSP 1 Score: 601 bits (1549), Expect = 8.28e-217
Identity = 292/306 (95.42%), Postives = 296/306 (96.73%), Query Frame = 0


Query: 1   MYLRLRGIGHMGEGSMDDMEGTRVTLIESSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSD 60
           MYLRLRGIGHMGEGSMDD EGTRVTLIES SSS RLTKRSRTPYNGPQVPSCMVDGCSSD
Sbjct: 1   MYLRLRGIGHMGEGSMDDNEGTRVTLIESLSSSLRLTKRSRTPYNGPQVPSCMVDGCSSD 60

Query: 61  LSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHN 120
           LSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHN
Sbjct: 61  LSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHN 120

Query: 121 RRRRKPQPATIMLNAGRFLYSNQGPRFLPFGNQLLSASNDLSSSWVGTIKPEHNDALCSS 180
           RRRRKPQPAT+ LNAGRFLYSNQGPRFLPFGNQLLSA NDLSSSW+GTIKPEHNDALCSS
Sbjct: 121 RRRRKPQPATMTLNAGRFLYSNQGPRFLPFGNQLLSACNDLSSSWIGTIKPEHNDALCSS 180

Query: 181 NSQLDDADRRKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVMGNGCALSLLSTPVEAG 240
           NSQLD ADRRKSMFPGLSGCDYKEKQPPFLNVGS+NVGNVQKV+GNGCALSLLSTPVEAG
Sbjct: 181 NSQLDVADRRKSMFPGLSGCDYKEKQPPFLNVGSSNVGNVQKVVGNGCALSLLSTPVEAG 240

Query: 241 EINNLTSMVQSNLIPSSHFIHNDGLGFESDLVSPRLASDGSSDANIRCYSMFEDGPDGSS 300
           EINNLTSMVQSNLIPSSHF H DGLGFESDLVSPRL SDGSSDANIRCYSMFEDGPDGSS
Sbjct: 241 EINNLTSMVQSNLIPSSHFSHTDGLGFESDLVSPRLVSDGSSDANIRCYSMFEDGPDGSS 300

Query: 301 IDLFRF 306
           IDLF F
Sbjct: 301 IDLFWF 306

[Close]

BLAST of Cp4.1LG17g10620 vs. ExPASy TrEMBL
Match: A0A6J1H6H4 (squamosa promoter-binding-like protein 16 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111460645 PE=4 SV=1)

HSP 1 Score: 586 bits (1510), Expect = 5.22e-211
Identity = 285/297 (95.96%), Postives = 290/297 (97.64%), Query Frame = 0


Query: 11  MGEGSMDDMEGTRVTLIES-SSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHR 70
           MGEGSMDD+EGTRVTLIES SSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHR
Sbjct: 1   MGEGSMDDIEGTRVTLIESLSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHR 60

Query: 71  RHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPA 130
           RHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPA
Sbjct: 61  RHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPA 120

Query: 131 TIMLNAGRFLYSNQGPRFLPFGNQLLSASNDLSSSWVGTIKPEHNDALCSSNSQLDDADR 190
           TI LNAGRFLYSNQGPRFLPFGNQLLS  NDLSSSW+G IKPEHNDALCSSNSQLD ADR
Sbjct: 121 TITLNAGRFLYSNQGPRFLPFGNQLLSTGNDLSSSWIGMIKPEHNDALCSSNSQLDIADR 180

Query: 191 RKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVMGNGCALSLLSTPVEAGEINNLTSMV 250
           RKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKV+GNGCALSLLSTPVEAGEINNLTSMV
Sbjct: 181 RKSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVVGNGCALSLLSTPVEAGEINNLTSMV 240

Query: 251 QSNLIPSSHFIHNDGLGFESDLVSPRLASDGSSDANIRCYSMFEDGPDGSSIDLFRF 306
           QSNLIPSSHF+H+DGLGFESDLVSPRL SDGSSDANIRCYSMFEDGPDGSSIDLFRF
Sbjct: 241 QSNLIPSSHFVHSDGLGFESDLVSPRLVSDGSSDANIRCYSMFEDGPDGSSIDLFRF 297

[Close]

BLAST of Cp4.1LG17g10620 vs. ExPASy TrEMBL
Match: A0A6J1KPU5 (squamosa promoter-binding-like protein 16 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111497618 PE=4 SV=1)

HSP 1 Score: 580 bits (1494), Expect = 1.38e-208
Identity = 282/296 (95.27%), Postives = 286/296 (96.62%), Query Frame = 0


Query: 11  MGEGSMDDMEGTRVTLIESSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHRR 70
           MGEGSMDD EGTRVTLIES SSS RLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHRR
Sbjct: 1   MGEGSMDDNEGTRVTLIESLSSSLRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHRR 60

Query: 71  HKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPAT 130
           HKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPAT
Sbjct: 61  HKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPAT 120

Query: 131 IMLNAGRFLYSNQGPRFLPFGNQLLSASNDLSSSWVGTIKPEHNDALCSSNSQLDDADRR 190
           + LNAGRFLYSNQGPRFLPFGNQLLSA NDLSSSW+GTIKPEHNDALCSSNSQLD ADRR
Sbjct: 121 MTLNAGRFLYSNQGPRFLPFGNQLLSACNDLSSSWIGTIKPEHNDALCSSNSQLDVADRR 180

Query: 191 KSMFPGLSGCDYKEKQPPFLNVGSNNVGNVQKVMGNGCALSLLSTPVEAGEINNLTSMVQ 250
           KSMFPGLSGCDYKEKQPPFLNVGS+NVGNVQKV+GNGCALSLLSTPVEAGEINNLTSMVQ
Sbjct: 181 KSMFPGLSGCDYKEKQPPFLNVGSSNVGNVQKVVGNGCALSLLSTPVEAGEINNLTSMVQ 240

Query: 251 SNLIPSSHFIHNDGLGFESDLVSPRLASDGSSDANIRCYSMFEDGPDGSSIDLFRF 306
           SNLIPSSHF H DGLGFESDLVSPRL SDGSSDANIRCYSMFEDGPDGSSIDLF F
Sbjct: 241 SNLIPSSHFSHTDGLGFESDLVSPRLVSDGSSDANIRCYSMFEDGPDGSSIDLFWF 296

[Close]

BLAST of Cp4.1LG17g10620 vs. ExPASy TrEMBL
Match: A0A0A0KAG4 (SBP-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G094760 PE=4 SV=1)

HSP 1 Score: 484 bits (1246), Expect = 2.70e-170
Identity = 248/331 (74.92%), Postives = 266/331 (80.36%), Query Frame = 0


Query: 1   MYLRLRGIGHMGEGSMDDMEGTRVTLIESSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSD 60
           MY  LRGIG+M E SMDDM+GTRV LIESSSS  RL KRSR P +G QVPSCMVDGCSSD
Sbjct: 1   MYWELRGIGNMDERSMDDMKGTRVALIESSSS--RLMKRSRAPGSGAQVPSCMVDGCSSD 60

Query: 61  LSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHN 120
           LSKCRDYHRRHKVCE HSKTPKVTICG+EQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHN
Sbjct: 61  LSKCRDYHRRHKVCELHSKTPKVTICGQEQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHN 120

Query: 121 RRRRKPQPATIMLNAGRFLYSNQGPRFLPFGNQLLSASNDLSSSWVGTIKPEHNDALCSS 180
           RRRRKPQPAT+ LNAGRFLY NQGPRFLPFGNQLL+AS+D+SSSW+G IKPE+N  LC  
Sbjct: 121 RRRRKPQPATMTLNAGRFLYGNQGPRFLPFGNQLLTASSDVSSSWIGMIKPENNVPLCGG 180

Query: 181 NSQLDDADRRKSMFPGLSGCDYKEKQ-----------------PPFLNVGSNNVGNVQKV 240
           NSQ D  DRRKSM PG    DYKEKQ                  PFLNVGS+N GNVQKV
Sbjct: 181 NSQFDFTDRRKSMLPGSLSSDYKEKQLAISCIPIGLLPKSSDTQPFLNVGSSNGGNVQKV 240

Query: 241 MGNG--------CALSLLSTPVEAGEINNLTSMVQSNLIPSSHFIHNDGLGFESDLVSPR 300
           +GNG        CALSLLSTPVE GEIN L+SM QSNLIP +HFIH+DGLG E D +S  
Sbjct: 241 LGNGSNRFFDSDCALSLLSTPVEPGEIN-LSSMSQSNLIPPAHFIHSDGLGLEGDPISSG 300

Query: 301 LASDGSSDANIRCYSMFEDGPDGSSIDLFRF 306
           L SDGSSDANIRCYS F+DGPDGSS+DLFRF
Sbjct: 301 LVSDGSSDANIRCYSTFQDGPDGSSVDLFRF 328

[Close]

BLAST of Cp4.1LG17g10620 vs. TAIR 10
Match: AT5G50570.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 156.4 bits (394), Expect = 3.7e-38
Identity = 102/224 (45.54%), Postives = 130/224 (58.04%), Query Frame = 0


Query: 29  SSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHRRHKVCEFHSKTPKVTICGR 88
           S SSSS+ T+ +    N  Q+P C+VDGC SD S CR+YH+RHKVC+ HSKTP VTI G 
Sbjct: 80  SRSSSSKRTRGNGVGTN--QMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGH 139

Query: 89  EQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATIMLNAGRFLYSNQGPRFL 148
           +QRFCQQCSRFH+L EFD+ KRSCRKRLDGHNRRRRKPQP  I   A  F    QG + L
Sbjct: 140 KQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHIGRPA-NFFTGFQGSKLL 199

Query: 149 PF--GNQLLSASNDLSSSW----VGTIKPEHNDALCSSNSQLDDADRRKS--MFPGLSGC 208
            F  G+ +   ++ L+ SW    V      +  +   S S +  +   K+  MFP  S  
Sbjct: 200 EFSGGSHVFPTTSVLNPSWGNSLVSVAVAANGSSYGQSQSYVVGSSPAKTGIMFPISSSP 259

Query: 209 DYKE---KQPPFL--NVGSNNVGNVQK----VMGNGCALSLLST 236
           +      KQ PFL     S      ++    +  + CALSLLS+
Sbjct: 260 NSTRSIAKQFPFLQEEESSRTASLCERMTSCIHDSDCALSLLSS 300

[Close]

BLAST of Cp4.1LG17g10620 vs. TAIR 10
Match: AT5G50670.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 156.4 bits (394), Expect = 3.7e-38
Identity = 102/224 (45.54%), Postives = 130/224 (58.04%), Query Frame = 0


Query: 29  SSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHRRHKVCEFHSKTPKVTICGR 88
           S SSSS+ T+ +    N  Q+P C+VDGC SD S CR+YH+RHKVC+ HSKTP VTI G 
Sbjct: 80  SRSSSSKRTRGNGVGTN--QMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGH 139

Query: 89  EQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATIMLNAGRFLYSNQGPRFL 148
           +QRFCQQCSRFH+L EFD+ KRSCRKRLDGHNRRRRKPQP  I   A  F    QG + L
Sbjct: 140 KQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHIGRPA-NFFTGFQGSKLL 199

Query: 149 PF--GNQLLSASNDLSSSW----VGTIKPEHNDALCSSNSQLDDADRRKS--MFPGLSGC 208
            F  G+ +   ++ L+ SW    V      +  +   S S +  +   K+  MFP  S  
Sbjct: 200 EFSGGSHVFPTTSVLNPSWGNSLVSVAVAANGSSYGQSQSYVVGSSPAKTGIMFPISSSP 259

Query: 209 DYKE---KQPPFL--NVGSNNVGNVQK----VMGNGCALSLLST 236
           +      KQ PFL     S      ++    +  + CALSLLS+
Sbjct: 260 NSTRSIAKQFPFLQEEESSRTASLCERMTSCIHDSDCALSLLSS 300

[Close]

BLAST of Cp4.1LG17g10620 vs. TAIR 10
Match: AT5G50570.2 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 156.4 bits (394), Expect = 3.7e-38
Identity = 102/224 (45.54%), Postives = 130/224 (58.04%), Query Frame = 0


Query: 29  SSSSSSRLTKRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHRRHKVCEFHSKTPKVTICGR 88
           S SSSS+ T+ +    N  Q+P C+VDGC SD S CR+YH+RHKVC+ HSKTP VTI G 
Sbjct: 80  SRSSSSKRTRGNGVGTN--QMPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGH 139

Query: 89  EQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATIMLNAGRFLYSNQGPRFL 148
           +QRFCQQCSRFH+L EFD+ KRSCRKRLDGHNRRRRKPQP  I   A  F    QG + L
Sbjct: 140 KQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRRRKPQPEHIGRPA-NFFTGFQGSKLL 199

Query: 149 PF--GNQLLSASNDLSSSW----VGTIKPEHNDALCSSNSQLDDADRRKS--MFPGLSGC 208
            F  G+ +   ++ L+ SW    V      +  +   S S +  +   K+  MFP  S  
Sbjct: 200 EFSGGSHVFPTTSVLNPSWGNSLVSVAVAANGSSYGQSQSYVVGSSPAKTGIMFPISSSP 259

Query: 209 DYKE---KQPPFL--NVGSNNVGNVQK----VMGNGCALSLLST 236
           +      KQ PFL     S      ++    +  + CALSLLS+
Sbjct: 260 NSTRSIAKQFPFLQEEESSRTASLCERMTSCIHDSDCALSLLSS 300

[Close]

BLAST of Cp4.1LG17g10620 vs. TAIR 10
Match: AT2G42200.1 (squamosa promoter binding protein-like 9 )

HSP 1 Score: 137.9 bits (346), Expect = 1.4e-32
Identity = 88/226 (38.94%), Postives = 121/226 (53.54%), Query Frame = 0


Query: 29  SSSSSSRLTKRSRTPYNGP--QVPSCMVDGCSSDLSKCRDYHRRHKVCEFHSKTPKVTIC 88
           SSSS  R  +R R   +G   Q+P C V+GC  DL+  + Y+ RH+VC  HSKTPKVT+ 
Sbjct: 49  SSSSGGRSNRRVRGGGSGQSGQIPRCQVEGCGMDLTNAKGYYSRHRVCGVHSKTPKVTVA 108

Query: 89  GREQRFCQQCSRFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATIMLNAGRF------LY 148
           G EQRFCQQCSRFH L EFD  KRSCR+RL GHN RRRKPQPA++ + A R+      LY
Sbjct: 109 GIEQRFCQQCSRFHQLPEFDLEKRSCRRRLAGHNERRRKPQPASLSVLASRYGRIAPSLY 168

Query: 149 SN--QGPRFLPFGNQLLSASNDLSSSWVGTIKPEHNDALCSSNSQLDDADRRKSMFPGLS 208
            N   G      GNQ +   +  +       +P     + S + Q++  +       G  
Sbjct: 169 ENGDAGMNGSFLGNQEIGWPSSRTLDTRVMRRP-----VSSPSWQINPMNVFSQGSVGGG 228

Query: 209 GCDYKEKQPPFLNVGSNNVGNVQKVMGNGCALSLLSTPVEAGEINN 245
           G  +   +     +    + + + +  + CALSLLS P +  + NN
Sbjct: 229 GTSFSSPE-----IMDTKLESYKGIGDSNCALSLLSNPHQPHDNNN 264

[Close]

BLAST of Cp4.1LG17g10620 vs. TAIR 10
Match: AT1G27370.1 (squamosa promoter binding protein-like 10 )

HSP 1 Score: 130.6 bits (327), Expect = 2.2e-30
Identity = 64/123 (52.03%), Postives = 81/123 (65.85%), Query Frame = 0


Query: 38  KRSRTPYNGPQVPSCMVDGCSSDLSKCRDYHRRHKVCEFHSKTPKVTICGREQRFCQQCS 97
           K++++     QVP C +DGC  DLS  +DYHR+H+VCE HSK PKV + G E+RFCQQCS
Sbjct: 162 KKTKSCGQSMQVPRCQIDGCELDLSSSKDYHRKHRVCETHSKCPKVVVSGLERRFCQQCS 221

Query: 98  RFHSLVEFDDRKRSCRKRLDGHNRRRRKPQPATIMLNAGRFLYSNQGPRFLPFGNQLLSA 157
           RFH++ EFD++KRSCRKRL  HN RRRKPQ     LN+ R     Q    L  G  L + 
Sbjct: 222 RFHAVSEFDEKKRSCRKRLSHHNARRRKPQ-GVFPLNSERVFDRRQHTSMLWNGLSLNTR 281

Query: 158 SND 161
           S +
Sbjct: 282 SEE 283

The following BLAST results are available for this feature:

BLAST of Cp4.1LG17g10620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6YZE8	3.0e-40	49.47	Squamosa promoter-binding-like protein 16 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q49I57	9.6e-39	40.36	Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=3 SV=1	[more]
Q49I55	9.6e-39	40.36	Teosinte glume architecture 1 OS=Zea mays OX=4577 GN=TGA1 PE=1 SV=1	[more]
B9DI20	5.3e-37	45.54	Squamosa promoter-binding-like protein 13A OS=Arabidopsis thaliana OX=3702 GN=SP...	[more]
P0DI11	5.3e-37	45.54	Squamosa promoter-binding-like protein 13B OS=Arabidopsis thaliana OX=3702 GN=SP...	[more]

BLAST of Cp4.1LG17g10620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023513759.1	4.43e-228	100.00	squamosa promoter-binding-like protein 16 isoform X1 [Cucurbita pepo subsp. pepo...	[more]
XP_023513762.1	7.41e-220	100.00	squamosa promoter-binding-like protein 16 isoform X2 [Cucurbita pepo subsp. pepo...	[more]
XP_022959621.1	6.46e-219	96.09	squamosa promoter-binding-like protein 16 isoform X1 [Cucurbita moschata] >XP_02...	[more]
XP_023004220.1	1.71e-216	95.42	squamosa promoter-binding-like protein 16 isoform X1 [Cucurbita maxima]	[more]
KAG6592958.1	4.52e-211	96.08	putative DNA primase large subunit, partial [Cucurbita argyrosperma subsp. soror...	[more]

BLAST of Cp4.1LG17g10620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H521	3.13e-219	96.09	squamosa promoter-binding-like protein 16 isoform X1 OS=Cucurbita moschata OX=36...	[more]
A0A6J1KTZ2	8.28e-217	95.42	squamosa promoter-binding-like protein 16 isoform X1 OS=Cucurbita maxima OX=3661...	[more]
A0A6J1H6H4	5.22e-211	95.96	squamosa promoter-binding-like protein 16 isoform X2 OS=Cucurbita moschata OX=36...	[more]
A0A6J1KPU5	1.38e-208	95.27	squamosa promoter-binding-like protein 16 isoform X2 OS=Cucurbita maxima OX=3661...	[more]
A0A0A0KAG4	2.70e-170	74.92	SBP-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G094760 PE...	[more]

BLAST of Cp4.1LG17g10620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50570.1	3.7e-38	45.54	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT5G50670.1	3.7e-38	45.54	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT5G50570.2	3.7e-38	45.54	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT2G42200.1	1.4e-32	38.94	squamosa promoter binding protein-like 9	[more]
AT1G27370.1	2.2e-30	52.03	squamosa promoter binding protein-like 10	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036893	SBP domain superfamily	GENE3D	4.10.1100.10		coord: 44..113 e-value: 1.1E-31 score: 110.8
IPR036893	SBP domain superfamily	SUPERFAMILY	103612	SBT domain	coord: 50..131
IPR004333	SBP domain	PFAM	PF03110	SBP	coord: 52..125 e-value: 1.4E-28 score: 99.0
IPR004333	SBP domain	PROSITE	PS51141	ZF_SBP	coord: 49..126 score: 31.743927
None	No IPR available	PANTHER	PTHR31251:SF126	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 13A-RELATED	coord: 28..252
IPR044817	Squamosa promoter-binding-like protein	PANTHER	PTHR31251	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4	coord: 28..252

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG17g10620.1	Cp4.1LG17g10620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding