Cp4.1LG17g09330 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCCTTTTTCACACTCCCCATCTCTTAGTTTTCACTTTTGGCATTCTTGGTAAAATCATTCAACCATTCCCTAAAACTATCCTAACCCACAAATATATCATTATTTTAAAATAAACTCTAATAATGCATTAATGGCTTCTCAACCAACTTAACTTAAAACCTTTTCATTTGCAGGTAACATCGTTTCCTTCTTCGTCTACTTGGCTCCTTTGTAAGTCTCTATCTCTCTCTCCCTCTCTCCATATTTCCCTTTCAAATTCTTACTACACAAAATGTGTATATTTAGATGCTCTTCTTTTTTTACAAATTCCATTCTCTCTCAGGCCGACATTCAACAGAATATGGCGAAAGAAGTCGACGGAGGGCTTCCACGCGCTGCCATATTTAGTAGCACTCTTCAGCTCCGCCCTATGGCTCTTCTACGCCTTCCTCAAAACCAACACTTTCCTTCTCATCACCATCAACTCCTTTGGCTGCGTCATCGAGTTTCTCTACTTCCTCCTCTTTATTCTATTCGCCACCAATCCAATTAGGGTCCGTTTTCATATCCAACTGCATTCCTATCATCTTAAATTACTGCCTTCTTAACAACTTCTGTGATTTCGATTCTTGTAGATGATGACCATCAGACTGTTTGCTGTGATGAACATGGGGCTGTTTGGGTTCATCCTTCTTGCCATTCACTTCATTCCTAAGCCTTCAAACCGTGTTCAAGTTATGGGCTGGATTTGTGTGACCGTTTCTGTCTCTGTTTTTGCAGCTCCGTTAAGCATTCTGGTCAGCATTTACAGTGTGTTACAAATTAATTTAAACCCTTCCCTTTCGTTTTGGTGTTTTCAATATTGGGTTTCTTGTTCAAAGTGGAAATTATTGTGTACTCATTTATTTAGTGCTGTGTTGTTTTCAAAACTTTCCCATCATGATAACATTTCATCTCCAAATCATTAACTAACATTTTATCTTATATGTAAAACAACACAACTTACTCTCTTATATTAATTATATCTAGTAATCATTAGAGTTCGAGTTAGGAGTCAGGAAGGAATTTGCTCATTATACATCTTTTTTTTTATGGTGCAGAGACAAGTCATTCGAACAAAGAGCGTTGAGTACATGCCATTTACACTCTCATTCTTCCTTACATTGAGTGCCATAATGTGGTTTGCTTATGGTGTTTTCTTGAACGACATATGCGTTGCCGTAAGTGTTGTTTGATATCAAATGTATATTTAATCTAGAACTGAACTGGAAAAGGTATTGACTATGGTTTTGTACTTTTGGGACAGATTCCAAACGTGGTGGGGTTTGTATTGGGGTTGGTTCAGATGGTGGTGTATGCAATTTACAGAAAGGGAAGAATGGAAGAAGAGAAGGTAGCAGAGGAAGTAAAAGGCAGAGCAGTGGTAGCTGAGGTTCATCCTGTGAAGGCCAACGGAAATGACGCACAAAAGGATGTAATGATAATAATAAAGGAGGAACAACTTCATGAAACCGCAATCAGCTGTGACAAAAGCAATATTAATCAATCTCCACTTTAGTTCTACCTTACATCATCATCATCAAACTTTCTGTTGTTGTTGTTGTAATTTCTATACCATTTGGGAGTGGAGTGAAGAAGAAGAAGAAGAAGATGATGATGTTGATAACATCAGCAACAATGGCCCTTTCCTTTTACCTACTACTGCTATTATTGTTACCTTTGCTTCATTTCTTCTCTTATATATCAACTATTAATCACACCCCATTTTCGTCTCTTTTTCTGTGTCCTTGCACATTTAATTATATAGTAATAATATTGTTAAATGATTATGAAATGATTCCACGCTCACCCATCACATATCTCTTTGGTTGTACTCTGCAGAGTTGATCATACAGGACATAAGCAAATCAAACAACCCAACCCTCACCTTTTCAATTATTTTTCCTTTTCCTTCATTCTCAGTCTCTCTTTCTGCATTCTCCTCCACCATGCTTGCCTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTACATCAATTGCCTTGCTGCTCACCATGATGATATAGAAGCCTGAATAAGCCCTCCTAACATTCCAACTTATTCGTTCTTCCCCGACCAACCCAACCAAACATAGTGCAGGAAGGAAGGAAGGAAGGAGACAAGGTAACAGACCTGCTCATGCCTTGTGCATCTCTTCCTCTATCTCCATTACTTACCCATTCGAACCATCAAAACTGCCTTGTGCGCTCTGTCGCCTTTTTTCTCGCCAATTCTCTCCCCACATCTTCGCCTCAGCCACTGCACGTTCTCTCTCTGAATCCTTATTCAAAATCCTACCAGTCTCCCTTGGGGACTCGTCCTTCCCCGGACCATCCAATGTCCACCTTCGTTCACATGCTCCCCCTTCTTCATTCTTTACTGCAACTTTCTCGTCTCTGTTCCGTCTTTCGTCCCGATCACCAGAACCTCTCTGAGCAGCAGCAGCAGTACCTGAAGGAGAACTTGGATCATAGGATTGATTTGCCAAGTATGACAGGGCAGTGACCACGTCTCCAATCAGCGGACGGGCTGCAGCCTGTTCTTGGGTACACATGGATGCCACAGCGAGAGCCTGGTACAGACCTCGCATGGGATACCGCCCCTGCAACTGTGGATCAGCCAATTTTGAGAATCTTCTGCGGTCGTTAAAAAATGGGC ATGGCCCTTTTTCACACTCCCCATCTCTTAGTTTTCACTTTTGGCATTCTTGGTAACATCGTTTCCTTCTTCGTCTACTTGGCTCCTTTGCCGACATTCAACAGAATATGGCGAAAGAAGTCGACGGAGGGCTTCCACGCGCTGCCATATTTAGTAGCACTCTTCAGCTCCGCCCTATGGCTCTTCTACGCCTTCCTCAAAACCAACACTTTCCTTCTCATCACCATCAACTCCTTTGGCTGCGTCATCGAGTTTCTCTACTTCCTCCTCTTTATTCTATTCGCCACCAATCCAATTAGGATGATGACCATCAGACTGTTTGCTGTGATGAACATGGGGCTGTTTGGGTTCATCCTTCTTGCCATTCACTTCATTCCTAAGCCTTCAAACCGTGTTCAAGTTATGGGCTGGATTTGTGTGACCGTTTCTGTCTCTGTTTTTGCAGCTCCGTTAAGCATTCTGAGACAAGTCATTCGAACAAAGAGCGTTGAGTACATGCCATTTACACTCTCATTCTTCCTTACATTGAGTGCCATAATGTGGTTTGCTTATGGTGTTTTCTTGAACGACATATGCGTTGCCATTCCAAACGTGGTGGGGTTTGTATTGGGGTTGGTTCAGATGGTGGTGTATGCAATTTACAGAAAGGGAAGAATGGAAGAAGAGAAGGTAGCAGAGGAAGTAAAAGGCAGAGCAGTGGTAGCTGAGGTTCATCCTGTGAAGGCCAACGGAAATGACGCACAAAAGGATGTAATGATAATAATAAAGGAGGAACAACTTCATGAAACCGCAATCAGCTGTGACAAAAGCAATATTAATCAATCTCCACTTTAGTTCTACCTTACATCATCATCATCAAACTTTCTGTTGTTGTTGTTGTAATTTCTATACCATTTGGGAGTGGAGTGAAGAAGAAGAAGAAGAAGATGATGATGTTGATAACATCAGCAACAATGGCCCTTTCCTTTTACCTACTACTGCTATTATTGTTACCTTTGCTTCATTTCTTCTCTTATATATCAACTATTAATCACACCCCATTTTCGTCTCTTTTTCTGTGTCCTTGCACATTTAATTATATAGTAATAATATTGTTAAATGATTATGAAATGATTCCACGCTCACCCATCACATATCTCTTTGGTTGTACTCTGCAGAGTTGATCATACAGGACATAAGCAAATCAAACAACCCAACCCTCACCTTTTCAATTATTTTTCCTTTTCCTTCATTCTCAGTCTCTCTTTCTGCATTCTCCTCCACCATGCTTGCCTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTACATCAATTGCCTTGCTGCTCACCATGATGATATAGAAGCCTGAATAAGCCCTCCTAACATTCCAACTTATTCGTTCTTCCCCGACCAACCCAACCAAACATAGTGCAGGAAGGAAGGAAGGAAGGAGACAAGGTAACAGACCTGCTCATGCCTTGTGCATCTCTTCCTCTATCTCCATTACTTACCCATTCGAACCATCAAAACTGCCTTGTGCGCTCTGTCGCCTTTTTTCTCGCCAATTCTCTCCCCACATCTTCGCCTCAGCCACTGCACGTTCTCTCTCTGAATCCTTATTCAAAATCCTACCAGTCTCCCTTGGGGACTCGTCCTTCCCCGGACCATCCAATGTCCACCTTCGTTCACATGCTCCCCCTTCTTCATTCTTTACTGCAACTTTCTCGTCTCTGTTCCGTCTTTCGTCCCGATCACCAGAACCTCTCTGAGCAGCAGCAGCAGTACCTGAAGGAGAACTTGGATCATAGGATTGATTTGCCAAGTATGACAGGGCAGTGACCACGTCTCCAATCAGCGGACGGGCTGCAGCCTGTTCTTGGGTACACATGGATGCCACAGCGAGAGCCTGGTACAGACCTCGCATGGGATACCGCCCCTGCAACTGTGGATCAGCCAATTTTGAGAATCTTCTGCGGTCGTTAAAAAATGGGC ATGGCCCTTTTTCACACTCCCCATCTCTTAGTTTTCACTTTTGGCATTCTTGGTAACATCGTTTCCTTCTTCGTCTACTTGGCTCCTTTGCCGACATTCAACAGAATATGGCGAAAGAAGTCGACGGAGGGCTTCCACGCGCTGCCATATTTAGTAGCACTCTTCAGCTCCGCCCTATGGCTCTTCTACGCCTTCCTCAAAACCAACACTTTCCTTCTCATCACCATCAACTCCTTTGGCTGCGTCATCGAGTTTCTCTACTTCCTCCTCTTTATTCTATTCGCCACCAATCCAATTAGGATGATGACCATCAGACTGTTTGCTGTGATGAACATGGGGCTGTTTGGGTTCATCCTTCTTGCCATTCACTTCATTCCTAAGCCTTCAAACCGTGTTCAAGTTATGGGCTGGATTTGTGTGACCGTTTCTGTCTCTGTTTTTGCAGCTCCGTTAAGCATTCTGAGACAAGTCATTCGAACAAAGAGCGTTGAGTACATGCCATTTACACTCTCATTCTTCCTTACATTGAGTGCCATAATGTGGTTTGCTTATGGTGTTTTCTTGAACGACATATGCGTTGCCATTCCAAACGTGGTGGGGTTTGTATTGGGGTTGGTTCAGATGGTGGTGTATGCAATTTACAGAAAGGGAAGAATGGAAGAAGAGAAGGTAGCAGAGGAAGTAAAAGGCAGAGCAGTGGTAGCTGAGGTTCATCCTGTGAAGGCCAACGGAAATGACGCACAAAAGGATGTAATGATAATAATAAAGGAGGAACAACTTCATGAAACCGCAATCAGCTGTGACAAAAGCAATATTAATCAATCTCCACTTTAG MALFHTPHLLVFTFGILGNIVSFFVYLAPLPTFNRIWRKKSTEGFHALPYLVALFSSALWLFYAFLKTNTFLLITINSFGCVIEFLYFLLFILFATNPIRMMTIRLFAVMNMGLFGFILLAIHFIPKPSNRVQVMGWICVTVSVSVFAAPLSILRQVIRTKSVEYMPFTLSFFLTLSAIMWFAYGVFLNDICVAIPNVVGFVLGLVQMVVYAIYRKGRMEEEKVAEEVKGRAVVAEVHPVKANGNDAQKDVMIIIKEEQLHETAISCDKSNINQSPL Homology
BLAST of Cp4.1LG17g09330 vs. ExPASy Swiss-Prot
Match: Q9FY94 (Bidirectional sugar transporter SWEET15 OS=Arabidopsis thaliana OX=3702 GN=SWEET15 PE=1 SV=1) HSP 1 Score: 277.3 bits (708), Expect = 1.9e-73 Identity = 147/255 (57.65%), Postives = 188/255 (73.73%), Query Frame = 0
BLAST of Cp4.1LG17g09330 vs. ExPASy Swiss-Prot
Match: P93332 (Bidirectional sugar transporter N3 OS=Medicago truncatula OX=3880 GN=N3 PE=2 SV=1) HSP 1 Score: 266.9 bits (681), Expect = 2.5e-70 Identity = 144/253 (56.92%), Postives = 187/253 (73.91%), Query Frame = 0
BLAST of Cp4.1LG17g09330 vs. ExPASy Swiss-Prot
Match: P0DKJ5 (Bidirectional sugar transporter SWEET15 OS=Vitis vinifera OX=29760 GN=SWEET15 PE=3 SV=1) HSP 1 Score: 263.8 bits (673), Expect = 2.1e-69 Identity = 139/259 (53.67%), Postives = 187/259 (72.20%), Query Frame = 0
BLAST of Cp4.1LG17g09330 vs. ExPASy Swiss-Prot
Match: O82587 (Bidirectional sugar transporter SWEET12 OS=Arabidopsis thaliana OX=3702 GN=SWEET12 PE=1 SV=1) HSP 1 Score: 240.0 bits (611), Expect = 3.3e-62 Identity = 124/229 (54.15%), Postives = 171/229 (74.67%), Query Frame = 0
BLAST of Cp4.1LG17g09330 vs. ExPASy Swiss-Prot
Match: Q9SMM5 (Bidirectional sugar transporter SWEET11 OS=Arabidopsis thaliana OX=3702 GN=SWEET11 PE=1 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 9.5e-62 Identity = 118/215 (54.88%), Postives = 165/215 (76.74%), Query Frame = 0
BLAST of Cp4.1LG17g09330 vs. NCBI nr
Match: XP_023513923.1 (bidirectional sugar transporter N3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 528 bits (1360), Expect = 1.17e-188 Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0
BLAST of Cp4.1LG17g09330 vs. NCBI nr
Match: KAG6592811.1 (Bidirectional sugar transporter SWEET15, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 528 bits (1359), Expect = 1.66e-188 Identity = 276/277 (99.64%), Postives = 277/277 (100.00%), Query Frame = 0
BLAST of Cp4.1LG17g09330 vs. NCBI nr
Match: XP_022960350.1 (bidirectional sugar transporter N3-like [Cucurbita moschata]) HSP 1 Score: 527 bits (1358), Expect = 2.36e-188 Identity = 276/277 (99.64%), Postives = 277/277 (100.00%), Query Frame = 0
BLAST of Cp4.1LG17g09330 vs. NCBI nr
Match: XP_023004306.1 (bidirectional sugar transporter N3-like [Cucurbita maxima]) HSP 1 Score: 520 bits (1339), Expect = 1.86e-185 Identity = 273/277 (98.56%), Postives = 274/277 (98.92%), Query Frame = 0
BLAST of Cp4.1LG17g09330 vs. NCBI nr
Match: XP_038875798.1 (LOW QUALITY PROTEIN: bidirectional sugar transporter N3 [Benincasa hispida]) HSP 1 Score: 421 bits (1081), Expect = 5.35e-146 Identity = 217/275 (78.91%), Postives = 249/275 (90.55%), Query Frame = 0
BLAST of Cp4.1LG17g09330 vs. ExPASy TrEMBL
Match: A0A6J1H8U0 (Bidirectional sugar transporter SWEET OS=Cucurbita moschata OX=3662 GN=LOC111461102 PE=3 SV=1) HSP 1 Score: 527 bits (1358), Expect = 1.14e-188 Identity = 276/277 (99.64%), Postives = 277/277 (100.00%), Query Frame = 0
BLAST of Cp4.1LG17g09330 vs. ExPASy TrEMBL
Match: A0A6J1KRR8 (Bidirectional sugar transporter SWEET OS=Cucurbita maxima OX=3661 GN=LOC111497668 PE=3 SV=1) HSP 1 Score: 520 bits (1339), Expect = 9.00e-186 Identity = 273/277 (98.56%), Postives = 274/277 (98.92%), Query Frame = 0
BLAST of Cp4.1LG17g09330 vs. ExPASy TrEMBL
Match: A0A0A0KC70 (Bidirectional sugar transporter SWEET OS=Cucumis sativus OX=3659 GN=Csa_6G092510 PE=3 SV=1) HSP 1 Score: 398 bits (1023), Expect = 1.22e-137 Identity = 211/276 (76.45%), Postives = 242/276 (87.68%), Query Frame = 0
BLAST of Cp4.1LG17g09330 vs. ExPASy TrEMBL
Match: A0A1S3CAR4 (Bidirectional sugar transporter SWEET OS=Cucumis melo OX=3656 GN=LOC103498874 PE=3 SV=1) HSP 1 Score: 397 bits (1019), Expect = 4.97e-137 Identity = 211/276 (76.45%), Postives = 243/276 (88.04%), Query Frame = 0
BLAST of Cp4.1LG17g09330 vs. ExPASy TrEMBL
Match: A0A6J1JW19 (Bidirectional sugar transporter SWEET OS=Cucurbita maxima OX=3661 GN=LOC111488029 PE=3 SV=1) HSP 1 Score: 370 bits (951), Expect = 3.21e-127 Identity = 187/234 (79.91%), Postives = 217/234 (92.74%), Query Frame = 0
BLAST of Cp4.1LG17g09330 vs. TAIR 10
Match: AT5G13170.1 (senescence-associated gene 29 ) HSP 1 Score: 277.3 bits (708), Expect = 1.3e-74 Identity = 147/255 (57.65%), Postives = 188/255 (73.73%), Query Frame = 0
BLAST of Cp4.1LG17g09330 vs. TAIR 10
Match: AT5G23660.1 (homolog of Medicago truncatula MTN3 ) HSP 1 Score: 240.0 bits (611), Expect = 2.3e-63 Identity = 124/229 (54.15%), Postives = 171/229 (74.67%), Query Frame = 0
BLAST of Cp4.1LG17g09330 vs. TAIR 10
Match: AT3G48740.1 (Nodulin MtN3 family protein ) HSP 1 Score: 238.4 bits (607), Expect = 6.8e-63 Identity = 118/215 (54.88%), Postives = 165/215 (76.74%), Query Frame = 0
BLAST of Cp4.1LG17g09330 vs. TAIR 10
Match: AT5G50800.1 (Nodulin MtN3 family protein ) HSP 1 Score: 218.4 bits (555), Expect = 7.2e-57 Identity = 117/211 (55.45%), Postives = 157/211 (74.41%), Query Frame = 0
BLAST of Cp4.1LG17g09330 vs. TAIR 10
Match: AT5G50790.1 (Nodulin MtN3 family protein ) HSP 1 Score: 213.4 bits (542), Expect = 2.3e-55 Identity = 104/208 (50.00%), Postives = 159/208 (76.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|