Cp4.1LG17g09230 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG17g09230
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	small acidic protein-like isoform X2
Location	Cp4.1LG17: 7210496 .. 7212339 (+)
RNA-Seq Expression	Cp4.1LG17g09230
Synteny	Cp4.1LG17g09230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACCCCACGTCGGTGTTATATTCTCAACAACTCCCACGCGCACCTTGACTTCCTTTGCTTTTGCTCTTTTCTTTTTCCTTTTTTTTTTTCTTTAAAATAATTACAATTCCACTCCCTCGTCTTCCAATAATATGCCCTTTCGTCTTCTTCTGCTTCCTTCTTATTCGCCATGAAATCTCCCGATACGGCGCCGATTACCCATTCTCTCCAGCACTCTTTCCGCACCTTCTCCCTCAACCACCGTCTCGCATCTTCTTCTCCTTCTCCTTCTTCTTCTTCTTCTTCTTCTTCCTCCCCTTCTTCCTTGGACCACGAACAACGTCATCATCAGCTCCACACTACCTTGGACCTCAACTCTCACATCTCCCTCCCTCCTTTCTGGGAACAATGCCTCGATTTGAAGGTCAGTGTAACCATTCTCGCCTCGCTTTTCATTTTGTGTCTAATTTGCGTCTGCTTAATTAATTCAACGCCTACTTCTCTTCTAACCTAGCTTCATTTAATGCCAAACGCGCATACGGCAGATCTCTGGAAATTCTGTTGTCTTCTACTTTTCATTAATTTTATGATGATTGTCGGAGAGGAAGCTTTGGGTTTCATCTTTAATGACTTTCTCATCCCATTAATTTGCCTTTATCATTTGCTTTCTTTGTTTCTTTCCTTCCTGCCACTCGGAATCGAAACCCTAGAATTAATTAATTTCACACTTCCTTTATCGTCCGCCATTTTTCGCTTCTCTTTTCGTACGATACATCAGAAACAGCTTTCTGGATTTTGGATTCCCTGCCTCTTTTATTTTATTTTTTTTTTTCTTTCCAAATTTTCAATAAACTTTTGCGATTCAGTTCCGTTTGGTCTTCCAGACAGGGGAAGTCTACTACACAAACTGCCGGACCGGAATGAGAGTAAAGGAAGATCCGAGGAGGGCGAAAGATTTATACTCCGAAGACGACGACGACGATGATGACGAGAGCTCGTCGGACGGGGACAGCGAGGAATCGTGTTCGTCGTCATCTTACGGCGGTAGTAAACAGCAATACCCGAGGGAAAACGAGGAGGAGGTGCTGGTGGTGGCCGGATGCAAGAGATGCTTCATGTACTTCATGGTGCCGAAACAGGTCGAAGGTTGCCCCAAATGCAGCAGCACTCGTCTTGTTCATTTCGATCGGACCCACGACAATAATGGCTTCCCATGACAAGGAACCATATATATTTCTGAAAAAGAAAATCAAACTGTAATTGGGTTATATGACCTGACAAAAAATATTTGATTCTTTTCCTTGGGGTTAAAAGCAAATGGGGTTTGAATTTTTCTTGTGCTCTAGCTCGCGTCATGTCCAGGATGTGTGTGTTGATGCGTATGGATTAAAAAAGTTTGATTAATTGGGAAGAGAAAGAAAGAGAATCTCTGGCATGGGCTGCCATGGATATGCCTGAGAGAGGTACGAAAAAATGTGCAGGTCTGAATGGGATGGTCAACGACTCAAACCAAGAAGAAGGAATATTATTTTGCTCGTGAAGACAGCGACTTGTTGCTTTCATTACAACCCACCAACATTGAATCGTACGCTATGATTTTTTTTTTTAATTGTTTTTTTATGGGTAAACTGTGATTATATAATGGCAATGAATATGAAATGATTTAAAATACATACGTACATACATTAATAAAGCTCAACCCTGTGGGTAACTAACTAATCAACATTTGCTTGCTTCTTAGTGAATGGTGTATTACTCTTAGTCTATGTTCAAAACTTGATTTACACTTTGGTCAACTCCTTATCCTAAACTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

mRNA sequence

TACCCCACGTCGGTGTTATATTCTCAACAACTCCCACGCGCACCTTGACTTCCTTTGCTTTTGCTCTTTTCTTTTTCCTTTTTTTTTTTCTTTAAAATAATTACAATTCCACTCCCTCGTCTTCCAATAATATGCCCTTTCGTCTTCTTCTGCTTCCTTCTTATTCGCCATGAAATCTCCCGATACGGCGCCGATTACCCATTCTCTCCAGCACTCTTTCCGCACCTTCTCCCTCAACCACCGTCTCGCATCTTCTTCTCCTTCTCCTTCTTCTTCTTCTTCTTCTTCTTCCTCCCCTTCTTCCTTGGACCACGAACAACGTCATCATCAGCTCCACACTACCTTGGACCTCAACTCTCACATCTCCCTCCCTCCTTTCTGGGAACAATGCCTCGATTTGAAGACAGGGGAAGTCTACTACACAAACTGCCGGACCGGAATGAGAGTAAAGGAAGATCCGAGGAGGGCGAAAGATTTATACTCCGAAGACGACGACGACGATGATGACGAGAGCTCGTCGGACGGGGACAGCGAGGAATCGTGTTCGTCGTCATCTTACGGCGGTAGTAAACAGCAATACCCGAGGGAAAACGAGGAGGAGGTGCTGGTGGTGGCCGGATGCAAGAGATGCTTCATGTACTTCATGGTGCCGAAACAGGTCGAAGGTTGCCCCAAATGCAGCAGCACTCGTCTTGTTCATTTCGATCGGACCCACGACAATAATGGCTTCCCATGACAAGGAACCATATATATTTCTGAAAAAGAAAATCAAACTGTAATTGGGTTATATGACCTGACAAAAAATATTTGATTCTTTTCCTTGGGGTTAAAAGCAAATGGGGTTTGAATTTTTCTTGTGCTCTAGCTCGCGTCATGTCCAGGATGTGTGTGTTGATGCGTATGGATTAAAAAAGTTTGATTAATTGGGAAGAGAAAGAAAGAGAATCTCTGGCATGGGCTGCCATGGATATGCCTGAGAGAGGTACGAAAAAATGTGCAGGTCTGAATGGGATGGTCAACGACTCAAACCAAGAAGAAGGAATATTATTTTGCTCGTGAAGACAGCGACTTGTTGCTTTCATTACAACCCACCAACATTGAATCGTACGCTATGATTTTTTTTTTTAATTGTTTTTTTATGGGTAAACTGTGATTATATAATGGCAATGAATATGAAATGATTTAAAATACATACGTACATACATTAATAAAGCTCAACCCTGTGGGTAACTAACTAATCAACATTTGCTTGCTTCTTAGTGAATGGTGTATTACTCTTAGTCTATGTTCAAAACTTGATTTACACTTTGGTCAACTCCTTATCCTAAACTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Coding sequence (CDS)

ATGAAATCTCCCGATACGGCGCCGATTACCCATTCTCTCCAGCACTCTTTCCGCACCTTCTCCCTCAACCACCGTCTCGCATCTTCTTCTCCTTCTCCTTCTTCTTCTTCTTCTTCTTCTTCCTCCCCTTCTTCCTTGGACCACGAACAACGTCATCATCAGCTCCACACTACCTTGGACCTCAACTCTCACATCTCCCTCCCTCCTTTCTGGGAACAATGCCTCGATTTGAAGACAGGGGAAGTCTACTACACAAACTGCCGGACCGGAATGAGAGTAAAGGAAGATCCGAGGAGGGCGAAAGATTTATACTCCGAAGACGACGACGACGATGATGACGAGAGCTCGTCGGACGGGGACAGCGAGGAATCGTGTTCGTCGTCATCTTACGGCGGTAGTAAACAGCAATACCCGAGGGAAAACGAGGAGGAGGTGCTGGTGGTGGCCGGATGCAAGAGATGCTTCATGTACTTCATGGTGCCGAAACAGGTCGAAGGTTGCCCCAAATGCAGCAGCACTCGTCTTGTTCATTTCGATCGGACCCACGACAATAATGGCTTCCCATGA

Protein sequence

MKSPDTAPITHSLQHSFRTFSLNHRLASSSPSPSSSSSSSSSPSSLDHEQRHHQLHTTLDLNSHISLPPFWEQCLDLKTGEVYYTNCRTGMRVKEDPRRAKDLYSEDDDDDDDESSSDGDSEESCSSSSYGGSKQQYPRENEEEVLVVAGCKRCFMYFMVPKQVEGCPKCSSTRLVHFDRTHDNNGFP

Homology

[Close]

BLAST of Cp4.1LG17g09230 vs. NCBI nr
Match: XP_023514681.1 (uncharacterized protein LOC111778908 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 374 bits (959), Expect = 1.72e-130
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0


Query: 1   MKSPDTAPITHSLQHSFRTFSLNHRLASSSPSPSSSSSSSSSPSSLDHEQRHHQLHTTLD 60
           MKSPDTAPITHSLQHSFRTFSLNHRLASSSPSPSSSSSSSSSPSSLDHEQRHHQLHTTLD
Sbjct: 1   MKSPDTAPITHSLQHSFRTFSLNHRLASSSPSPSSSSSSSSSPSSLDHEQRHHQLHTTLD 60

Query: 61  LNSHISLPPFWEQCLDLKTGEVYYTNCRTGMRVKEDPRRAKDLYSEDDDDDDDESSSDGD 120
           LNSHISLPPFWEQCLDLKTGEVYYTNCRTGMRVKEDPRRAKDLYSEDDDDDDDESSSDGD
Sbjct: 61  LNSHISLPPFWEQCLDLKTGEVYYTNCRTGMRVKEDPRRAKDLYSEDDDDDDDESSSDGD 120

Query: 121 SEESCSSSSYGGSKQQYPRENEEEVLVVAGCKRCFMYFMVPKQVEGCPKCSSTRLVHFDR 180
           SEESCSSSSYGGSKQQYPRENEEEVLVVAGCKRCFMYFMVPKQVEGCPKCSSTRLVHFDR
Sbjct: 121 SEESCSSSSYGGSKQQYPRENEEEVLVVAGCKRCFMYFMVPKQVEGCPKCSSTRLVHFDR 180

Query: 181 THDNNGFP 188
           THDNNGFP
Sbjct: 181 THDNNGFP 188

[Close]

BLAST of Cp4.1LG17g09230 vs. NCBI nr
Match: XP_023514680.1 (uncharacterized protein LOC111778908 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 367 bits (942), Expect = 8.31e-128
Identity = 188/194 (96.91%), Postives = 188/194 (96.91%), Query Frame = 0


Query: 1   MKSPDTAPITHSLQHSFRTFSLNHRLASSSPSPSSSSSSSSSPSSLDHEQRHHQLHTTLD 60
           MKSPDTAPITHSLQHSFRTFSLNHRLASSSPSPSSSSSSSSSPSSLDHEQRHHQLHTTLD
Sbjct: 1   MKSPDTAPITHSLQHSFRTFSLNHRLASSSPSPSSSSSSSSSPSSLDHEQRHHQLHTTLD 60

Query: 61  LNSHISLPPFWEQCLDLK------TGEVYYTNCRTGMRVKEDPRRAKDLYSEDDDDDDDE 120
           LNSHISLPPFWEQCLDLK      TGEVYYTNCRTGMRVKEDPRRAKDLYSEDDDDDDDE
Sbjct: 61  LNSHISLPPFWEQCLDLKFRLVFQTGEVYYTNCRTGMRVKEDPRRAKDLYSEDDDDDDDE 120

Query: 121 SSSDGDSEESCSSSSYGGSKQQYPRENEEEVLVVAGCKRCFMYFMVPKQVEGCPKCSSTR 180
           SSSDGDSEESCSSSSYGGSKQQYPRENEEEVLVVAGCKRCFMYFMVPKQVEGCPKCSSTR
Sbjct: 121 SSSDGDSEESCSSSSYGGSKQQYPRENEEEVLVVAGCKRCFMYFMVPKQVEGCPKCSSTR 180

Query: 181 LVHFDRTHDNNGFP 188
           LVHFDRTHDNNGFP
Sbjct: 181 LVHFDRTHDNNGFP 194

[Close]

BLAST of Cp4.1LG17g09230 vs. NCBI nr
Match: XP_022959638.1 (uncharacterized protein LOC111460657 isoform X2 [Cucurbita moschata])

HSP 1 Score: 323 bits (827), Expect = 1.67e-110
Identity = 168/188 (89.36%), Postives = 170/188 (90.43%), Query Frame = 0


Query: 1   MKSPDTAPITHSLQHSFRTFSLNHRLASSSPSPSSSSSSSSSPSSLDHEQRHHQLHTTLD 60
           MKSPDTA  THSLQHSFRTFSLNHRLAS        SSSSSS S LDHEQRHHQLHTTLD
Sbjct: 1   MKSPDTAATTHSLQHSFRTFSLNHRLAS--------SSSSSSSSFLDHEQRHHQLHTTLD 60

Query: 61  LNSHISLPPFWEQCLDLKTGEVYYTNCRTGMRVKEDPRRAKDLYSEDDDDDDDESSSDGD 120
           LNSHISLPPFWEQCL LKTGEVYYTNCRTGMRVKEDPR AKDLYSEDDDDDD ESSSD  
Sbjct: 61  LNSHISLPPFWEQCLHLKTGEVYYTNCRTGMRVKEDPRMAKDLYSEDDDDDD-ESSSDEG 120

Query: 121 SEESCSSSSYGGSKQQYPRENEEEVLVVAGCKRCFMYFMVPKQVEGCPKCSSTRLVHFDR 180
           SEESCSSSSY GS+QQYPRENEEEVLVVAGCKRCFMYFMVPKQVEGCPKCSS+RLVHFDR
Sbjct: 121 SEESCSSSSYSGSRQQYPRENEEEVLVVAGCKRCFMYFMVPKQVEGCPKCSSSRLVHFDR 179

Query: 181 THDNNGFP 188
           THDNNGFP
Sbjct: 181 THDNNGFP 179

[Close]

BLAST of Cp4.1LG17g09230 vs. NCBI nr
Match: XP_023004851.1 (small acidic protein-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 322 bits (825), Expect = 3.37e-110
Identity = 166/191 (86.91%), Postives = 169/191 (88.48%), Query Frame = 0


Query: 1   MKSPDTAPITHSLQHSFRTFSLNHRLASSSPSPSSSSSSSSSPSSLDHEQRHHQLHTTLD 60
           MKSPD A ITHSL+HSFRTFSLNHRLAS            SSPS LDHEQ HHQLHTTLD
Sbjct: 1   MKSPDMAAITHSLEHSFRTFSLNHRLAS------------SSPSFLDHEQPHHQLHTTLD 60

Query: 61  LNSHISLPPFWEQCLDLKTGEVYYTNCRTGMRVKEDPRRAKDLYSEDDDDDDD---ESSS 120
           LNSHISLPPFWEQCLDLKTGEVYY NCRTGMRVKEDPRRAKDLYSEDDDDDDD   ESSS
Sbjct: 61  LNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVKEDPRRAKDLYSEDDDDDDDDDDESSS 120

Query: 121 DGDSEESCSSSSYGGSKQQYPRENEEEVLVVAGCKRCFMYFMVPKQVEGCPKCSSTRLVH 180
           DG SEESCSSSSY GS+QQYPRENEEEVLVVAGCKRCFMYFMVPKQVEGCPKCSS+RLVH
Sbjct: 121 DGGSEESCSSSSYAGSRQQYPRENEEEVLVVAGCKRCFMYFMVPKQVEGCPKCSSSRLVH 179

Query: 181 FDRTHDNNGFP 188
           FDRTHDNNGFP
Sbjct: 181 FDRTHDNNGFP 179

[Close]

BLAST of Cp4.1LG17g09230 vs. NCBI nr
Match: XP_022959637.1 (uncharacterized protein LOC111460657 isoform X1 [Cucurbita moschata])

HSP 1 Score: 316 bits (810), Expect = 8.02e-108
Identity = 168/194 (86.60%), Postives = 170/194 (87.63%), Query Frame = 0


Query: 1   MKSPDTAPITHSLQHSFRTFSLNHRLASSSPSPSSSSSSSSSPSSLDHEQRHHQLHTTLD 60
           MKSPDTA  THSLQHSFRTFSLNHRLAS        SSSSSS S LDHEQRHHQLHTTLD
Sbjct: 1   MKSPDTAATTHSLQHSFRTFSLNHRLAS--------SSSSSSSSFLDHEQRHHQLHTTLD 60

Query: 61  LNSHISLPPFWEQCLDLK------TGEVYYTNCRTGMRVKEDPRRAKDLYSEDDDDDDDE 120
           LNSHISLPPFWEQCL LK      TGEVYYTNCRTGMRVKEDPR AKDLYSEDDDDDD E
Sbjct: 61  LNSHISLPPFWEQCLHLKFRSVFQTGEVYYTNCRTGMRVKEDPRMAKDLYSEDDDDDD-E 120

Query: 121 SSSDGDSEESCSSSSYGGSKQQYPRENEEEVLVVAGCKRCFMYFMVPKQVEGCPKCSSTR 180
           SSSD  SEESCSSSSY GS+QQYPRENEEEVLVVAGCKRCFMYFMVPKQVEGCPKCSS+R
Sbjct: 121 SSSDEGSEESCSSSSYSGSRQQYPRENEEEVLVVAGCKRCFMYFMVPKQVEGCPKCSSSR 180

Query: 181 LVHFDRTHDNNGFP 188
           LVHFDRTHDNNGFP
Sbjct: 181 LVHFDRTHDNNGFP 185

[Close]

BLAST of Cp4.1LG17g09230 vs. ExPASy TrEMBL
Match: A0A6J1H6I7 (uncharacterized protein LOC111460657 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111460657 PE=4 SV=1)

HSP 1 Score: 323 bits (827), Expect = 8.08e-111
Identity = 168/188 (89.36%), Postives = 170/188 (90.43%), Query Frame = 0


Query: 1   MKSPDTAPITHSLQHSFRTFSLNHRLASSSPSPSSSSSSSSSPSSLDHEQRHHQLHTTLD 60
           MKSPDTA  THSLQHSFRTFSLNHRLAS        SSSSSS S LDHEQRHHQLHTTLD
Sbjct: 1   MKSPDTAATTHSLQHSFRTFSLNHRLAS--------SSSSSSSSFLDHEQRHHQLHTTLD 60

Query: 61  LNSHISLPPFWEQCLDLKTGEVYYTNCRTGMRVKEDPRRAKDLYSEDDDDDDDESSSDGD 120
           LNSHISLPPFWEQCL LKTGEVYYTNCRTGMRVKEDPR AKDLYSEDDDDDD ESSSD  
Sbjct: 61  LNSHISLPPFWEQCLHLKTGEVYYTNCRTGMRVKEDPRMAKDLYSEDDDDDD-ESSSDEG 120

Query: 121 SEESCSSSSYGGSKQQYPRENEEEVLVVAGCKRCFMYFMVPKQVEGCPKCSSTRLVHFDR 180
           SEESCSSSSY GS+QQYPRENEEEVLVVAGCKRCFMYFMVPKQVEGCPKCSS+RLVHFDR
Sbjct: 121 SEESCSSSSYSGSRQQYPRENEEEVLVVAGCKRCFMYFMVPKQVEGCPKCSSSRLVHFDR 179

Query: 181 THDNNGFP 188
           THDNNGFP
Sbjct: 181 THDNNGFP 179

[Close]

BLAST of Cp4.1LG17g09230 vs. ExPASy TrEMBL
Match: A0A6J1KTA1 (small acidic protein-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111498029 PE=4 SV=1)

HSP 1 Score: 322 bits (825), Expect = 1.63e-110
Identity = 166/191 (86.91%), Postives = 169/191 (88.48%), Query Frame = 0


Query: 1   MKSPDTAPITHSLQHSFRTFSLNHRLASSSPSPSSSSSSSSSPSSLDHEQRHHQLHTTLD 60
           MKSPD A ITHSL+HSFRTFSLNHRLAS            SSPS LDHEQ HHQLHTTLD
Sbjct: 1   MKSPDMAAITHSLEHSFRTFSLNHRLAS------------SSPSFLDHEQPHHQLHTTLD 60

Query: 61  LNSHISLPPFWEQCLDLKTGEVYYTNCRTGMRVKEDPRRAKDLYSEDDDDDDD---ESSS 120
           LNSHISLPPFWEQCLDLKTGEVYY NCRTGMRVKEDPRRAKDLYSEDDDDDDD   ESSS
Sbjct: 61  LNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVKEDPRRAKDLYSEDDDDDDDDDDESSS 120

Query: 121 DGDSEESCSSSSYGGSKQQYPRENEEEVLVVAGCKRCFMYFMVPKQVEGCPKCSSTRLVH 180
           DG SEESCSSSSY GS+QQYPRENEEEVLVVAGCKRCFMYFMVPKQVEGCPKCSS+RLVH
Sbjct: 121 DGGSEESCSSSSYAGSRQQYPRENEEEVLVVAGCKRCFMYFMVPKQVEGCPKCSSSRLVH 179

Query: 181 FDRTHDNNGFP 188
           FDRTHDNNGFP
Sbjct: 181 FDRTHDNNGFP 179

[Close]

BLAST of Cp4.1LG17g09230 vs. ExPASy TrEMBL
Match: A0A6J1H536 (uncharacterized protein LOC111460657 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460657 PE=4 SV=1)

HSP 1 Score: 316 bits (810), Expect = 3.88e-108
Identity = 168/194 (86.60%), Postives = 170/194 (87.63%), Query Frame = 0


Query: 1   MKSPDTAPITHSLQHSFRTFSLNHRLASSSPSPSSSSSSSSSPSSLDHEQRHHQLHTTLD 60
           MKSPDTA  THSLQHSFRTFSLNHRLAS        SSSSSS S LDHEQRHHQLHTTLD
Sbjct: 1   MKSPDTAATTHSLQHSFRTFSLNHRLAS--------SSSSSSSSFLDHEQRHHQLHTTLD 60

Query: 61  LNSHISLPPFWEQCLDLK------TGEVYYTNCRTGMRVKEDPRRAKDLYSEDDDDDDDE 120
           LNSHISLPPFWEQCL LK      TGEVYYTNCRTGMRVKEDPR AKDLYSEDDDDDD E
Sbjct: 61  LNSHISLPPFWEQCLHLKFRSVFQTGEVYYTNCRTGMRVKEDPRMAKDLYSEDDDDDD-E 120

Query: 121 SSSDGDSEESCSSSSYGGSKQQYPRENEEEVLVVAGCKRCFMYFMVPKQVEGCPKCSSTR 180
           SSSD  SEESCSSSSY GS+QQYPRENEEEVLVVAGCKRCFMYFMVPKQVEGCPKCSS+R
Sbjct: 121 SSSDEGSEESCSSSSYSGSRQQYPRENEEEVLVVAGCKRCFMYFMVPKQVEGCPKCSSSR 180

Query: 181 LVHFDRTHDNNGFP 188
           LVHFDRTHDNNGFP
Sbjct: 181 LVHFDRTHDNNGFP 185

[Close]

BLAST of Cp4.1LG17g09230 vs. ExPASy TrEMBL
Match: A0A6J1KVR6 (uncharacterized protein LOC111498029 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498029 PE=4 SV=1)

HSP 1 Score: 315 bits (808), Expect = 7.84e-108
Identity = 166/197 (84.26%), Postives = 169/197 (85.79%), Query Frame = 0


Query: 1   MKSPDTAPITHSLQHSFRTFSLNHRLASSSPSPSSSSSSSSSPSSLDHEQRHHQLHTTLD 60
           MKSPD A ITHSL+HSFRTFSLNHRLAS            SSPS LDHEQ HHQLHTTLD
Sbjct: 1   MKSPDMAAITHSLEHSFRTFSLNHRLAS------------SSPSFLDHEQPHHQLHTTLD 60

Query: 61  LNSHISLPPFWEQCLDLK------TGEVYYTNCRTGMRVKEDPRRAKDLYSEDDDDDDD- 120
           LNSHISLPPFWEQCLDLK      TGEVYY NCRTGMRVKEDPRRAKDLYSEDDDDDDD 
Sbjct: 61  LNSHISLPPFWEQCLDLKFRLVFQTGEVYYRNCRTGMRVKEDPRRAKDLYSEDDDDDDDD 120

Query: 121 --ESSSDGDSEESCSSSSYGGSKQQYPRENEEEVLVVAGCKRCFMYFMVPKQVEGCPKCS 180
             ESSSDG SEESCSSSSY GS+QQYPRENEEEVLVVAGCKRCFMYFMVPKQVEGCPKCS
Sbjct: 121 DDESSSDGGSEESCSSSSYAGSRQQYPRENEEEVLVVAGCKRCFMYFMVPKQVEGCPKCS 180

Query: 181 STRLVHFDRTHDNNGFP 188
           S+RLVHFDRTHDNNGFP
Sbjct: 181 SSRLVHFDRTHDNNGFP 185

[Close]

BLAST of Cp4.1LG17g09230 vs. ExPASy TrEMBL
Match: A0A6J1JMX9 (uncharacterized protein LOC111488350 OS=Cucurbita maxima OX=3661 GN=LOC111488350 PE=4 SV=1)

HSP 1 Score: 268 bits (684), Expect = 9.12e-89
Identity = 146/197 (74.11%), Postives = 159/197 (80.71%), Query Frame = 0


Query: 1   MKSPDTAPITHSLQHSFRTFSLNHRLASSSPSP----SSSSSSSSSPSSLDHEQRHHQLH 60
           MKSPD A +T SL+ SFRTFSLNHRL S +PS     SSSSSSS+    L     HH+  
Sbjct: 1   MKSPDMAAVTDSLEQSFRTFSLNHRLVSPAPSAGVRRSSSSSSSADERHLPLHHHHHRFD 60

Query: 61  TTLDLNSHISLPPFWEQCLDLKTGEVYYTNCRTGMRVKEDPRRA----KDLYSEDDDDDD 120
           TTL+LNSHISLPPFWEQCLDLKTGEVYY NCRTGMRV EDPR A    +DLYSEDDDD+D
Sbjct: 61  TTLELNSHISLPPFWEQCLDLKTGEVYYRNCRTGMRVTEDPRTAEAHGRDLYSEDDDDND 120

Query: 121 -DESSSDGDSEESCSSSSYGGSKQQYPRENEEEVLVVAGCKRCFMYFMVPKQVEGCPKCS 180
            DESSSD  SEESCSSSSYG S+QQYP   EE+VLVVAGCKRCFMYFMVPKQVE CPKCS
Sbjct: 121 ADESSSDDSSEESCSSSSYGASRQQYPPGKEEDVLVVAGCKRCFMYFMVPKQVEDCPKCS 180

Query: 181 STRLVHFDRTHDNNGFP 188
           S+RLVHFDR+ D+NGFP
Sbjct: 181 SSRLVHFDRSEDSNGFP 197

[Close]

BLAST of Cp4.1LG17g09230 vs. TAIR 10
Match: AT2G33510.1 (CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28070.1); Has 3898 Blast hits to 1138 proteins in 179 species: Archae - 0; Bacteria - 40; Metazoa - 2353; Fungi - 242; Plants - 298; Viruses - 92; Other Eukaryotes - 873 (source: NCBI BLink). )

HSP 1 Score: 136.3 bits (342), Expect = 2.5e-32
Identity = 91/194 (46.91%), Postives = 113/194 (58.25%), Query Frame = 0


Query: 1   MKSPDTAPITHSLQHSFRTFSLNHRLASSSPSPSSSSSSSSSPSSLDHEQRHHQLHTTLD 60
           MK+P+   IT SL+ S    SLN R           SSS+   + +           TL+
Sbjct: 1   MKAPNMETITESLEKSMMNCSLNDRRRRVVGDGFGRSSSNEHMTPISDR--------TLE 60

Query: 61  LNSHISLPPFWEQCLDLKTGEVYYTNCRTGMRVKEDPRRAKDLYSEDDDD----DDDESS 120
           LNSH+SLP  WEQCLDLKTGE+YY N + GMRVKEDPR+  +   +  D       +E S
Sbjct: 61  LNSHLSLPCHWEQCLDLKTGEIYYINWKNGMRVKEDPRKVMNADPDSGDSYGTVCSEEDS 120

Query: 121 SDGDSEESCSSSSYGG--------SKQQYPRENEEEVLVVAGCKRCFMYFMVPKQVEGCP 180
           S  DSEES S SS            +++   E EE+VLVVAGCK CFMYFMVPK VE CP
Sbjct: 121 SYYDSEESSSESSPSSRENHKEEEEEEEEEEEEEEDVLVVAGCKACFMYFMVPKLVEDCP 180

Query: 181 KCSSTRLVHFDRTH 183
           KC++ +L+HFDR H
Sbjct: 181 KCAA-QLLHFDRPH 185

[Close]

BLAST of Cp4.1LG17g09230 vs. TAIR 10
Match: AT2G33510.2 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28070.1). )

HSP 1 Score: 126.3 bits (316), Expect = 2.5e-29
Identity = 91/209 (43.54%), Postives = 113/209 (54.07%), Query Frame = 0


Query: 1   MKSPDTAPITHSLQHSFRTFSLNHRLASSSPSPSSSSSSSSSPSSLDHEQRHHQLHTTLD 60
           MK+P+   IT SL+ S    SLN R           SSS+   + +           TL+
Sbjct: 1   MKAPNMETITESLEKSMMNCSLNDRRRRVVGDGFGRSSSNEHMTPISDR--------TLE 60

Query: 61  LNSHISLPPFWEQCLDLK---------------TGEVYYTNCRTGMRVKEDPRRAKDLYS 120
           LNSH+SLP  WEQCLDLK               TGE+YY N + GMRVKEDPR+  +   
Sbjct: 61  LNSHLSLPCHWEQCLDLKVKLITTETSNSCRFRTGEIYYINWKNGMRVKEDPRKVMNADP 120

Query: 121 EDDDD----DDDESSSDGDSEESCSSSSYGG--------SKQQYPRENEEEVLVVAGCKR 180
           +  D       +E SS  DSEES S SS            +++   E EE+VLVVAGCK 
Sbjct: 121 DSGDSYGTVCSEEDSSYYDSEESSSESSPSSRENHKEEEEEEEEEEEEEEDVLVVAGCKA 180

Query: 181 CFMYFMVPKQVEGCPKCSSTRLVHFDRTH 183
           CFMYFMVPK VE CPKC++ +L+HFDR H
Sbjct: 181 CFMYFMVPKLVEDCPKCAA-QLLHFDRPH 200

[Close]

BLAST of Cp4.1LG17g09230 vs. TAIR 10
Match: AT1G28070.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33510.1); Has 85 Blast hits to 77 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 106.7 bits (265), Expect = 2.1e-23
Identity = 80/188 (42.55%), Postives = 107/188 (56.91%), Query Frame = 0


Query: 7   APITHSLQHSFRTFSLNHRLASSSPSPSSSSSSSSSPSSLDHEQRHHQLHTTLDLNSHIS 66
           A IT  L+ S +  SL  R   SS       S    P S             L+L+SH S
Sbjct: 2   ADITEYLERSMQNCSLIDR--RSSMGDGFGMSDEHIPIS----------DRFLELSSHFS 61

Query: 67  LPPFWEQCLDLKTGEVYYTNCRTGMRVKEDPRR--AKDLYSEDDDDD-------DDESSS 126
           +P   EQCLDLKTGE+YY +  +GMRVKEDPR+  ++  Y++    +        +E SS
Sbjct: 62  VPSHLEQCLDLKTGEIYYRSWNSGMRVKEDPRKSMSRGNYADQSSGESSGTVFSSEEVSS 121

Query: 127 DGDSEESCSSSSYGGSKQQYPRENEEEVLVVAGCKRCFMYFMVPKQVEGCPKCSSTRLVH 186
             +SEES S SS   S++ +  E +E+VLVVAGCK C MYFMVPK  + CPKC +T+L+H
Sbjct: 122 YYESEESSSESS-PSSRKYHKEEQDEDVLVVAGCKACLMYFMVPKLFKDCPKC-ATQLLH 175

The following BLAST results are available for this feature:

BLAST of Cp4.1LG17g09230 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG17g09230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023514681.1	1.72e-130	100.00	uncharacterized protein LOC111778908 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023514680.1	8.31e-128	96.91	uncharacterized protein LOC111778908 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022959638.1	1.67e-110	89.36	uncharacterized protein LOC111460657 isoform X2 [Cucurbita moschata]	[more]
XP_023004851.1	3.37e-110	86.91	small acidic protein-like isoform X2 [Cucurbita maxima]	[more]
XP_022959637.1	8.02e-108	86.60	uncharacterized protein LOC111460657 isoform X1 [Cucurbita moschata]	[more]

BLAST of Cp4.1LG17g09230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H6I7	8.08e-111	89.36	uncharacterized protein LOC111460657 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1KTA1	1.63e-110	86.91	small acidic protein-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111498029...	[more]
A0A6J1H536	3.88e-108	86.60	uncharacterized protein LOC111460657 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1KVR6	7.84e-108	84.26	uncharacterized protein LOC111498029 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1JMX9	9.12e-89	74.11	uncharacterized protein LOC111488350 OS=Cucurbita maxima OX=3661 GN=LOC111488350...	[more]

BLAST of Cp4.1LG17g09230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G33510.1	2.5e-32	46.91	CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202); BEST Arabidopsis t...	[more]
AT2G33510.2	2.5e-29	43.54	unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_c...	[more]
AT1G28070.1	2.1e-23	42.55	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.20.70.10		coord: 65..102 e-value: 1.7E-5 score: 26.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..136
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..139
None	No IPR available	PANTHER	PTHR14791:SF43	BNAA04G19570D PROTEIN	coord: 57..183
None	No IPR available	PANTHER	PTHR14791	BOMB/KIRA PROTEINS	coord: 57..183
IPR036020	WW domain superfamily	SUPERFAMILY	51045	WW domain	coord: 63..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG17g09230.1	Cp4.1LG17g09230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding