Cp4.1LG17g08730 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG17g08730
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Checkpoint protein
Location	Cp4.1LG17: 5072461 .. 5073835 (-)
RNA-Seq Expression	Cp4.1LG17g08730
Synteny	Cp4.1LG17g08730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGAAAAGGGAACAAGCGCCAAGCAAAAGAGAAAACCCGCATTGTCAGTGGCTTTGGCGCGAATTTTGCAATGCTCCTTCTCGTCAAGCTCGCGTCTGGATTCCATTACCAGAGAAGTTACCGAGCGCCATAGCTTCTGCTTCAAGGTACGTTCTCTTCTCTCCCGTTCTTAAACTTCATGTCTGGTTTCCAAGAAACTAATCTACTGAAACGAAACACGATGCTAATCGATCACTTTCTGATCCATGGTGCGTTTTGAACTGATAGATTACGATTATCCTATGTTTTATCTCACATATACGTTTTTCATTCCGTTTTCGTAGCCATGTTCATATCTATGTTAAAATTTTGGGGGAATAGTATTTGGTTGATCTTTTTCTAAGCTTAAGAAGTTTCCATTCTCTTTTCGGGAATCATCTCGCATCCGTTAACTTTTCCAGTTAGGTTAGAAAGACGTTGTCGATTGAGTAATGAAGTTTAAGGCATATCTTACGGATTATGTGGTAAATCTCCTGGAGAAGAGGTTTCTACTAGCCCTAGACAAGATGTGCAAGATATGCAATCTCTATTTGACCAGAGATTATGTCATCTTCTTGCATAACCTCCTTAGTGGCGGTGGAATTCAATCAACTGCTCAGTTTTGTAAATAATCTCTGTTTGATGACCACAGAATCTCCAGCAAGAATGATGAGCGAATTGTGTTTACCGTAGACATTTCTCTTCTCCACTGTGCCGTTCGTAGTAGTGTTAGCATTGTTCTGAGTTTGGTAATGGTCCAGCAGCAAATCGCCTTCAAATTATGTTAGTGAAGAAGTTTCCTCTGAATTGCGCCCAACCAATCCCTTTCCTTACATTTGAGGTTAAACGTTAAAAGTCTTCCGAAATTCTGGATGTACCAATCTTAAAGCCCATGTCAAGAGATCAAGCTATTGAACTTCGAACTGCTCTAGATATGGCACAGGATTCGCCTCGGAAGCTTGTGCAGGTTCCTAATCTTAAGCAGTTGTACAACTTTGTGAATTGAATGAGGAATGTTGGGGATTTTCTGAATGTCACCATAAGCAAGTATGGAGATTTGCACATGCAGATTTCCACAACATTGATCACTCCTTGTGCTGAGTATCGGAAACTATTCGTCATAGGGGAACTAGCAAATGCTCCAGCTAAAGATCAAAATCTAAGTGCTCAGACTAGATCGACCAGGGCAGCATTGCGGAGAGACGTTCAATCTGTACAGGTGAGAGTGAGGCACTTTGCCAAGAGCCTTCATTATTACCTGGCCAAGCCAAATTGCACTTTCTATGGCATTGCTCCTCAGGGCGCCTGCTTGACAGTATTATTTCAGTTCTTCATTCCTGGATCTCTGACAGACTGA

mRNA sequence

GTGAAAAGGGAACAAGCGCCAAGCAAAAGAGAAAACCCGCATTGTCAGTGGCTTTGGCGCGAATTTTGCAATGCTCCTTCTCGTCAAGCTCGCGTCTGGATTCCATTACCAGAGAAGTTACCGAGCGCCATAGCTTCTGCTTCAAGAATCTCCAGCAAGAATGATGAGCGAATTGTGTTTACCGTAGACATTTCTCTTCTCCACTGTGCCGTTCGTAGTAGTGTTAGCATTGTTCTGAGTTTGCCCATGTCAAGAGATCAAGCTATTGAACTTCGAACTGCTCTAGATATGGCACAGGATTCGCCTCGGAAGCTTGTGCAGATTTCCACAACATTGATCACTCCTTGTGCTGAGTATCGGAAACTATTCGTCATAGGGGAACTAGCAAATGCTCCAGCTAAAGATCAAAATCTAAGTGCTCAGACTAGATCGACCAGGGCAGCATTGCGGAGAGACGTTCAATCTGTACAGGTGAGAGTGAGGCACTTTGCCAAGAGCCTTCATTATTACCTGGCCAAGCCAAATTGCACTTTCTATGGCATTGCTCCTCAGGGCGCCTGCTTGACAGTATTATTTCAGTTCTTCATTCCTGGATCTCTGACAGACTGA

Coding sequence (CDS)

GTGAAAAGGGAACAAGCGCCAAGCAAAAGAGAAAACCCGCATTGTCAGTGGCTTTGGCGCGAATTTTGCAATGCTCCTTCTCGTCAAGCTCGCGTCTGGATTCCATTACCAGAGAAGTTACCGAGCGCCATAGCTTCTGCTTCAAGAATCTCCAGCAAGAATGATGAGCGAATTGTGTTTACCGTAGACATTTCTCTTCTCCACTGTGCCGTTCGTAGTAGTGTTAGCATTGTTCTGAGTTTGCCCATGTCAAGAGATCAAGCTATTGAACTTCGAACTGCTCTAGATATGGCACAGGATTCGCCTCGGAAGCTTGTGCAGATTTCCACAACATTGATCACTCCTTGTGCTGAGTATCGGAAACTATTCGTCATAGGGGAACTAGCAAATGCTCCAGCTAAAGATCAAAATCTAAGTGCTCAGACTAGATCGACCAGGGCAGCATTGCGGAGAGACGTTCAATCTGTACAGGTGAGAGTGAGGCACTTTGCCAAGAGCCTTCATTATTACCTGGCCAAGCCAAATTGCACTTTCTATGGCATTGCTCCTCAGGGCGCCTGCTTGACAGTATTATTTCAGTTCTTCATTCCTGGATCTCTGACAGACTGA

Protein sequence

VKREQAPSKRENPHCQWLWREFCNAPSRQARVWIPLPEKLPSAIASASRISSKNDERIVFTVDISLLHCAVRSSVSIVLSLPMSRDQAIELRTALDMAQDSPRKLVQISTTLITPCAEYRKLFVIGELANAPAKDQNLSAQTRSTRAALRRDVQSVQVRVRHFAKSLHYYLAKPNCTFYGIAPQGACLTVLFQFFIPGSLTD

Homology

[Close]

BLAST of Cp4.1LG17g08730 vs. NCBI nr
Match: XP_022953965.1 (uncharacterized protein LOC111456364 [Cucurbita moschata] >KAG6575604.1 Checkpoint protein hus1-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014146.1 Checkpoint protein hus1-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 194 bits (492), Expect = 1.86e-57
Identity = 124/232 (53.45%), Postives = 135/232 (58.19%), Query Frame = 0


Query: 49  RISSKNDERIVFTVDISLLHCAVRSSVSIV------------------------------ 108
           RISS+ND+RI FTVDISLLH AVRSSVSI                               
Sbjct: 67  RISSQNDDRIAFTVDISLLHRAVRSSVSICSEFGNGPTANRLQIKLVKKLPLNCTQSMPF 126

Query: 109 -----------------LSLPMSRDQAIELRTALDMAQDSPRKLVQ-------------- 168
                            +S PMSR Q +EL+TALDMAQD P+ LVQ              
Sbjct: 127 LTFETKGYKSAVIQDVPISKPMSRGQVLELQTALDMAQDLPQTLVQFPDLNQLQNFVDRM 186

Query: 169 --------------------ISTTLITPCAEYRKLFVIGELANAPAKDQNLSAQTRSTRA 199
                               ISTTLIT  AEYRKLFVIGE ANAPA+DQNLSAQTRSTRA
Sbjct: 187 KNVGDLLNVSISKYGDLHVQISTTLITLGAEYRKLFVIGEQANAPAEDQNLSAQTRSTRA 246

[Close]

BLAST of Cp4.1LG17g08730 vs. NCBI nr
Match: XP_023549190.1 (uncharacterized protein LOC111807621 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 193 bits (491), Expect = 2.62e-57
Identity = 123/232 (53.02%), Postives = 135/232 (58.19%), Query Frame = 0


Query: 49  RISSKNDERIVFTVDISLLHCAVRSSVSIV------------------------------ 108
           RISS+ND+RI FT+DISLLH AVRSSVSI                               
Sbjct: 67  RISSQNDDRIAFTIDISLLHRAVRSSVSICSEFGNGPTANRLQIKLVKKLPLNCTQSMPF 126

Query: 109 -----------------LSLPMSRDQAIELRTALDMAQDSPRKLVQ-------------- 168
                            +S PMSR Q +EL+TALDMAQD P+ LVQ              
Sbjct: 127 LTFETKGYKSAVIQDVPISKPMSRGQVLELQTALDMAQDLPQTLVQVPDLNQLQNFVDRM 186

Query: 169 --------------------ISTTLITPCAEYRKLFVIGELANAPAKDQNLSAQTRSTRA 199
                               ISTTLIT  AEYRKLFVIGE ANAPA+DQNLSAQTRSTRA
Sbjct: 187 KNVGDLLNVSISKYGDLHVQISTTLITLGAEYRKLFVIGEQANAPAEDQNLSAQTRSTRA 246

[Close]

BLAST of Cp4.1LG17g08730 vs. NCBI nr
Match: XP_038896378.1 (uncharacterized protein LOC120084639 [Benincasa hispida])

HSP 1 Score: 193 bits (490), Expect = 3.81e-57
Identity = 123/233 (52.79%), Postives = 135/233 (57.94%), Query Frame = 0


Query: 49  RISSKNDERIVFTVDISLLHCAVRSSVSIV------------------------------ 108
           RISS+ND+RI FT+DISLLH AVRSSVSI                               
Sbjct: 67  RISSQNDDRIAFTIDISLLHRAVRSSVSICCSEFGNGPTGNRLQIKLVKKLPLNCTQPMP 126

Query: 109 ------------------LSLPMSRDQAIELRTALDMAQDSPRKLVQ------------- 168
                             +S PMSR Q +EL+TALDMAQD P+ LVQ             
Sbjct: 127 FLTFETKGYKSAVIQDVPISKPMSRAQVLELQTALDMAQDLPQTLVQVPDLNQLQNFVDR 186

Query: 169 ---------------------ISTTLITPCAEYRKLFVIGELANAPAKDQNLSAQTRSTR 199
                                ISTTLIT  AEYRKLFVIGE ANAPA+DQNLSAQTRSTR
Sbjct: 187 MKNVGDLLNVSISKYGDLHVQISTTLITLGAEYRKLFVIGEQANAPAEDQNLSAQTRSTR 246

[Close]

BLAST of Cp4.1LG17g08730 vs. NCBI nr
Match: XP_004135852.1 (uncharacterized protein LOC101207808 [Cucumis sativus] >KGN45260.1 hypothetical protein Csa_016057 [Cucumis sativus])

HSP 1 Score: 188 bits (478), Expect = 2.36e-55
Identity = 122/232 (52.59%), Postives = 133/232 (57.33%), Query Frame = 0


Query: 49  RISSKNDERIVFTVDISLLHCAVRSSVSIV------------------------------ 108
           RISS+ND+RI FTVDISLLH AVRSSVSI                               
Sbjct: 67  RISSQNDDRIAFTVDISLLHRAVRSSVSICSEFGNGPTANRLQIKLVKKLPLNCTQPMPF 126

Query: 109 -----------------LSLPMSRDQAIELRTALDMAQDSPRKLVQ-------------- 168
                            +S PMSR Q +EL+TALDMAQD P+ LVQ              
Sbjct: 127 LTFETKGYKSAVIQDVPISKPMSRAQVLELQTALDMAQDLPQTLVQVPDLNQLQNFVDRM 186

Query: 169 --------------------ISTTLITPCAEYRKLFVIGELANAPAKDQNLSAQTRSTRA 199
                               IST LIT  AEYRKLFVIGE A APA+DQNLSAQTRSTRA
Sbjct: 187 KNVGDLLNVSISKYGDLHVQISTGLITLGAEYRKLFVIGEQARAPAEDQNLSAQTRSTRA 246

[Close]

BLAST of Cp4.1LG17g08730 vs. NCBI nr
Match: XP_022145400.1 (uncharacterized protein LOC111014854 [Momordica charantia] >XP_022145408.1 uncharacterized protein LOC111014854 [Momordica charantia])

HSP 1 Score: 188 bits (478), Expect = 2.36e-55
Identity = 120/232 (51.72%), Postives = 134/232 (57.76%), Query Frame = 0


Query: 49  RISSKNDERIVFTVDISLLHCAVRSSVSIV------------------------------ 108
           RISS+ND+RI FT+DISLLH AVRSSVSI                               
Sbjct: 67  RISSQNDDRIAFTIDISLLHRAVRSSVSICSEFGNGPTANRLQIKLVKKLPLNCTQPMPF 126

Query: 109 -----------------LSLPMSRDQAIELRTALDMAQDSPRKLVQ-------------- 168
                            +S PMSR Q +EL+TALDMAQD P+ LVQ              
Sbjct: 127 LTFETKGYKSAVIQDVPISKPMSRAQVLELQTALDMAQDLPQTLVQVPDLNELQNFVDRM 186

Query: 169 --------------------ISTTLITPCAEYRKLFVIGELANAPAKDQNLSAQTRSTRA 199
                               ISTTLIT  AEYRKLFVIGE ANAPA+D+NLSAQTRST+A
Sbjct: 187 KHVGDLLNVSISKYGDLHVQISTTLITLGAEYRKLFVIGEQANAPAEDENLSAQTRSTKA 246

[Close]

BLAST of Cp4.1LG17g08730 vs. ExPASy TrEMBL
Match: A0A6J1GR46 (Checkpoint protein OS=Cucurbita moschata OX=3662 GN=LOC111456364 PE=3 SV=1)

HSP 1 Score: 194 bits (492), Expect = 8.99e-58
Identity = 124/232 (53.45%), Postives = 135/232 (58.19%), Query Frame = 0


Query: 49  RISSKNDERIVFTVDISLLHCAVRSSVSIV------------------------------ 108
           RISS+ND+RI FTVDISLLH AVRSSVSI                               
Sbjct: 67  RISSQNDDRIAFTVDISLLHRAVRSSVSICSEFGNGPTANRLQIKLVKKLPLNCTQSMPF 126

Query: 109 -----------------LSLPMSRDQAIELRTALDMAQDSPRKLVQ-------------- 168
                            +S PMSR Q +EL+TALDMAQD P+ LVQ              
Sbjct: 127 LTFETKGYKSAVIQDVPISKPMSRGQVLELQTALDMAQDLPQTLVQFPDLNQLQNFVDRM 186

Query: 169 --------------------ISTTLITPCAEYRKLFVIGELANAPAKDQNLSAQTRSTRA 199
                               ISTTLIT  AEYRKLFVIGE ANAPA+DQNLSAQTRSTRA
Sbjct: 187 KNVGDLLNVSISKYGDLHVQISTTLITLGAEYRKLFVIGEQANAPAEDQNLSAQTRSTRA 246

[Close]

BLAST of Cp4.1LG17g08730 vs. ExPASy TrEMBL
Match: A0A1S3CDJ5 (Checkpoint protein OS=Cucumis melo OX=3656 GN=LOC103499810 PE=3 SV=1)

HSP 1 Score: 188 bits (478), Expect = 1.14e-55
Identity = 121/232 (52.16%), Postives = 134/232 (57.76%), Query Frame = 0


Query: 49  RISSKNDERIVFTVDISLLHCAVRSSVSIV------------------------------ 108
           RISS+ND+RI FT+DISLLH AVRSSVSI                               
Sbjct: 67  RISSQNDDRIAFTIDISLLHRAVRSSVSICSEFGNGPTANRLQIKLVKKLPLNCTQSMPF 126

Query: 109 -----------------LSLPMSRDQAIELRTALDMAQDSPRKLVQ-------------- 168
                            +S PMSR Q +EL+TALDMAQD P+ LVQ              
Sbjct: 127 LTFETKGYKSAVIQDVPISKPMSRAQVLELQTALDMAQDLPQTLVQVPDLNQLQNFVDRM 186

Query: 169 --------------------ISTTLITPCAEYRKLFVIGELANAPAKDQNLSAQTRSTRA 199
                               IST LIT  AEYRKLFVIGE A+APA+DQNLSAQTRSTRA
Sbjct: 187 KNVGDLLNVSISKYGDLHVQISTGLITLGAEYRKLFVIGEQASAPAEDQNLSAQTRSTRA 246

[Close]

BLAST of Cp4.1LG17g08730 vs. ExPASy TrEMBL
Match: A0A6J1CUD3 (Checkpoint protein OS=Momordica charantia OX=3673 GN=LOC111014854 PE=3 SV=1)

HSP 1 Score: 188 bits (478), Expect = 1.14e-55
Identity = 120/232 (51.72%), Postives = 134/232 (57.76%), Query Frame = 0


Query: 49  RISSKNDERIVFTVDISLLHCAVRSSVSIV------------------------------ 108
           RISS+ND+RI FT+DISLLH AVRSSVSI                               
Sbjct: 67  RISSQNDDRIAFTIDISLLHRAVRSSVSICSEFGNGPTANRLQIKLVKKLPLNCTQPMPF 126

Query: 109 -----------------LSLPMSRDQAIELRTALDMAQDSPRKLVQ-------------- 168
                            +S PMSR Q +EL+TALDMAQD P+ LVQ              
Sbjct: 127 LTFETKGYKSAVIQDVPISKPMSRAQVLELQTALDMAQDLPQTLVQVPDLNELQNFVDRM 186

Query: 169 --------------------ISTTLITPCAEYRKLFVIGELANAPAKDQNLSAQTRSTRA 199
                               ISTTLIT  AEYRKLFVIGE ANAPA+D+NLSAQTRST+A
Sbjct: 187 KHVGDLLNVSISKYGDLHVQISTTLITLGAEYRKLFVIGEQANAPAEDENLSAQTRSTKA 246

[Close]

BLAST of Cp4.1LG17g08730 vs. ExPASy TrEMBL
Match: A0A5A7UU85 (Checkpoint protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001910 PE=3 SV=1)

HSP 1 Score: 188 bits (478), Expect = 1.14e-55
Identity = 121/232 (52.16%), Postives = 134/232 (57.76%), Query Frame = 0


Query: 49  RISSKNDERIVFTVDISLLHCAVRSSVSIV------------------------------ 108
           RISS+ND+RI FT+DISLLH AVRSSVSI                               
Sbjct: 67  RISSQNDDRIAFTIDISLLHRAVRSSVSICSEFGNGPTANRLQIKLVKKLPLNCTQSMPF 126

Query: 109 -----------------LSLPMSRDQAIELRTALDMAQDSPRKLVQ-------------- 168
                            +S PMSR Q +EL+TALDMAQD P+ LVQ              
Sbjct: 127 LTFETKGYKSAVIQDVPISKPMSRAQVLELQTALDMAQDLPQTLVQVPDLNQLQNFVDRM 186

Query: 169 --------------------ISTTLITPCAEYRKLFVIGELANAPAKDQNLSAQTRSTRA 199
                               IST LIT  AEYRKLFVIGE A+APA+DQNLSAQTRSTRA
Sbjct: 187 KNVGDLLNVSISKYGDLHVQISTGLITLGAEYRKLFVIGEQASAPAEDQNLSAQTRSTRA 246

[Close]

BLAST of Cp4.1LG17g08730 vs. ExPASy TrEMBL
Match: A0A0A0K6B2 (Checkpoint protein OS=Cucumis sativus OX=3659 GN=Csa_7G432420 PE=3 SV=1)

HSP 1 Score: 188 bits (478), Expect = 1.14e-55
Identity = 122/232 (52.59%), Postives = 133/232 (57.33%), Query Frame = 0


Query: 49  RISSKNDERIVFTVDISLLHCAVRSSVSIV------------------------------ 108
           RISS+ND+RI FTVDISLLH AVRSSVSI                               
Sbjct: 67  RISSQNDDRIAFTVDISLLHRAVRSSVSICSEFGNGPTANRLQIKLVKKLPLNCTQPMPF 126

Query: 109 -----------------LSLPMSRDQAIELRTALDMAQDSPRKLVQ-------------- 168
                            +S PMSR Q +EL+TALDMAQD P+ LVQ              
Sbjct: 127 LTFETKGYKSAVIQDVPISKPMSRAQVLELQTALDMAQDLPQTLVQVPDLNQLQNFVDRM 186

Query: 169 --------------------ISTTLITPCAEYRKLFVIGELANAPAKDQNLSAQTRSTRA 199
                               IST LIT  AEYRKLFVIGE A APA+DQNLSAQTRSTRA
Sbjct: 187 KNVGDLLNVSISKYGDLHVQISTGLITLGAEYRKLFVIGEQARAPAEDQNLSAQTRSTRA 246

[Close]

BLAST of Cp4.1LG17g08730 vs. TAIR 10
Match: AT1G52530.1 (CONTAINS InterPro DOMAIN/s: Hus1-like protein (InterPro:IPR007150); Has 129 Blast hits to 128 proteins in 49 species: Archae - 0; Bacteria - 0; Metazoa - 57; Fungi - 10; Plants - 47; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). )

HSP 1 Score: 142.9 bits (359), Expect = 2.8e-34
Identity = 94/232 (40.52%), Postives = 121/232 (52.16%), Query Frame = 0


Query: 49  RISSKNDERIVFTVDISLLHCAVRSSVSIV------------------------------ 108
           RISS+N++RI F++D++LL+ AV+SSVSI                               
Sbjct: 67  RISSQNEDRIAFSLDVALLYRAVKSSVSICTEFSGGLASNRLQIKLVKKLPPNCTQPMPF 126

Query: 109 -----------------LSLPMSRDQAIELRTALDMAQDSPRKL---------------- 168
                            ++ P+SR Q IEL+TALD AQD P  L                
Sbjct: 127 LTFETKGYKSAVIQDVPITKPLSRSQVIELQTALDSAQDLPPTLVQVQDSNQLQNFVDHM 186

Query: 169 ------------------VQISTTLITPCAEYRKLFVIGELANAPAKDQNLSAQTRSTRA 200
                             VQ+STTLI    E+++L VIGE + AP +D+NLSAQ RS RA
Sbjct: 187 RHVGDVLNVTISKHGDLQVQVSTTLIRLGIEFQRLSVIGEKSQAPVEDRNLSAQARSERA 246

The following BLAST results are available for this feature:

BLAST of Cp4.1LG17g08730 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG17g08730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022953965.1	1.86e-57	53.45	uncharacterized protein LOC111456364 [Cucurbita moschata] >KAG6575604.1 Checkpoi...	[more]
XP_023549190.1	2.62e-57	53.02	uncharacterized protein LOC111807621 [Cucurbita pepo subsp. pepo]	[more]
XP_038896378.1	3.81e-57	52.79	uncharacterized protein LOC120084639 [Benincasa hispida]	[more]
XP_004135852.1	2.36e-55	52.59	uncharacterized protein LOC101207808 [Cucumis sativus] >KGN45260.1 hypothetical ...	[more]
XP_022145400.1	2.36e-55	51.72	uncharacterized protein LOC111014854 [Momordica charantia] >XP_022145408.1 uncha...	[more]

BLAST of Cp4.1LG17g08730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GR46	8.99e-58	53.45	Checkpoint protein OS=Cucurbita moschata OX=3662 GN=LOC111456364 PE=3 SV=1	[more]
A0A1S3CDJ5	1.14e-55	52.16	Checkpoint protein OS=Cucumis melo OX=3656 GN=LOC103499810 PE=3 SV=1	[more]
A0A6J1CUD3	1.14e-55	51.72	Checkpoint protein OS=Momordica charantia OX=3673 GN=LOC111014854 PE=3 SV=1	[more]
A0A5A7UU85	1.14e-55	52.16	Checkpoint protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G0...	[more]
A0A0A0K6B2	1.14e-55	52.59	Checkpoint protein OS=Cucumis sativus OX=3659 GN=Csa_7G432420 PE=3 SV=1	[more]

BLAST of Cp4.1LG17g08730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52530.1	2.8e-34	40.52	CONTAINS InterPro DOMAIN/s: Hus1-like protein (InterPro:IPR007150); Has 129 Blas...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007150	Checkpoint protein Hus1/Mec3	PFAM	PF04005	Hus1	coord: 106..198 e-value: 6.2E-9 score: 35.4
None	No IPR available	GENE3D	3.70.10.10		coord: 104..199 e-value: 1.1E-5 score: 26.5
None	No IPR available	PANTHER	PTHR12900:SF0	CHECKPOINT PROTEIN	coord: 106..199
None	No IPR available	PANTHER	PTHR12900	MITOTIC AND DNA DAMAGE CHECKPOINT PROTEIN HUS1	coord: 106..199

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG17g08730.1	Cp4.1LG17g08730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000077	DNA damage checkpoint signaling
biological_process	GO:0006259	DNA metabolic process
cellular_component	GO:0030896	checkpoint clamp complex