Cp4.1LG17g07670 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG17g07670
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Polyketide_cyc domain-containing protein
Location	Cp4.1LG17: 5766513 .. 5770786 (+)
RNA-Seq Expression	Cp4.1LG17g07670
Synteny	Cp4.1LG17g07670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGTTTCACCATTTCACCAATCATTTCCAGTCTTCGTTCGTCTGCGTCTCTGACGGCCTTGATATTGTTGTGGCTCTGAAAAGAGGGAGAGATTTTCAGAGGCTGTTCTTGCATTTGGTGCCCTCAACTCTCTGCTCACCACTCCCTTTCTGTCCAGTCGCTCTCTTCTTCTTCTTCACGAATTTCAAATCTCAGTATGTCACTTGCAGCTCTCACCTGTAATTCGAATCCAAACACTCTGAATCTCAGTCATCGATCGATCAGAAGGAGCAATGGCGTTTTATTCATGGCGATTCCCACTCGCAGAACCATCAATTCGAGGTCACTATCTCTTCCCAAGCTCCTCTTCAGAATCCCCCGGGGTTCTTCGAAGTGCCGCAGAAACCCCATTTCCCCTCGAGTTAAATTCGTCTCCCCTGTGATGGAATGGCAGAATTGCACGTAAATACAGTATTTCTTTCTCGATTCTCCATGTTGTTTCGGTTTATTGATTCTCTATTTGCAATTGCTTGTTTGGATTTGGATTTGGATTTGGATTTCGGTTTCACTTCAAAAAGTTCCTAATTCTTCGCTGGATTGGTTTGGCTATTGCATATTGTTTTGATGATTTGATGTTGATTGCGGTGAAGTTCTTCCTGAATGATGTTCTCTGAGTTTCTTAGAATGTTGTAGGTTTGTTGGTATAACCAGGAAATGTGATGAATGCAGGGCCAAGATGGAAGTAGACATTCCTGCCTCGGTTGCTTATAAATGCTACTCAGATCGTGAAGCCATTCCCAAATGGATGCCCTTCATTTCATCTGTGAAGGTTAGCTATATTACTCAATCTCAAGTTGATTGATTACTGATCCTGAAAATATCTTCCATGTTTACTTGAAGATGCATTCGAGCAATATTGTATAATGGAAGGAAACCTTCAACTTGTTTTGCTTATATGAGGAGAAAAGTTTGTGAGCCTTAGAGTAGTTTCTTATGAAAGTCTCTTATGTGAGTGAATGCAAGTGAGGGGCAGGTCTATGTTTATGTGCAAAGTGATAGAAGAAAGAAAGATGAGAAAAATGGGCTGGCAATAGCCTATATTTTGGGAGAGAATCAAACCTTGGAACATCTAGTAACTTACAATTTAATTCCATAATCAATTGGTATTATAATGATTCTGCAACAAAATGAATGAATAGGAAGCGATGAGCTTTGCCTGTGAGATCCCATATCGGTTGGGAAGTAGAACGAAACCTTATTTATAAGGGTGTGAAAACCTCTTCCTAGCAGACGCGTTTTAAAACCTTGAGGAGAAGCTTGGAAGAGAAAGTCGAAAGAGGACAATATTTAATAGTGGTGGGCTTGGGCTGTTACAATGGTATCAGAGCCAGACACCAAGCAATGTGCCAACGAGGAGGCTGAGACCCGAGGGGGGTGGACACAAGGCGGTGTGCGCAAGGACACTGGACTCCGAAGGGTGATGGATTGGAGAGTCCCACATCGATTAGAGAAGGAAACGAGTGTCAGCGAGGGCATTGGGACTCGAAAGGGGGTGGATTGTGAGATCCCACATTGGTTGGGGAGGAGAACGAAACATCATTTATAAGGGTGTGGAAACCTCTCCCTAGCAAACACGTTTTAAAACCTTGAGTGGAAGCCCAGAAGGGAAAGCCCAAAGAGGACAATATCTGCTTTGGTCAGAGATGGGTACAATATTTTTTGTTGTCACTTCGGTTGACGTTTGGTCTTGGTTAAGTTGATCATTTGTAGTCCTCCCATGGGTGCACGTGCTTTCTATGTAAAACCATTAGGTAGGCTTAAAGAAGTACAAATATGGATATGAAACACAGACACCACATGACATTGGCACAATCATGTCATTTTTTAAAACTCTAAGAAACAGACACAGCAAAAACGATGTATTAATACATATTATTTTTTACACTACATAGAAAGTCAAAGTCTTAAAAAAATTGTATTTAGAGTTTGATGTATTTTGCTCTCAAATGTTCTTACTTTTGACATAGATTACTATTTTTGTCTTGTACGTTGAATCGGTGTTCGATACGTACCTAACAAATATTGGACTTAGACCCACGTTCACTTTGTACAATACGTGTCCAATAAGTTCAGTGTCCTAACACATGTCTAATATGCCATGTTTGTTTACTGCCAACACTTAAATCTTGGTACAGTTAAGCAATTTTTAGTTATCAGATAGATTGCACAATTTGAGAACTTGTTCTGTACTGTTTATAGGTTTTGGAAGATAATCCTACTTTATCACGGTGGTCATTAAAATACAATGCCTTTGGTCAAGATATTGAGTTCTCTTGGCTTGCTCGGAACTTGCAGGCAAACAATTCTATTCCTTGAACCTTCCATTTAACATCCATCATTTCAATAATTTTTTTGTCCTTAAACTGTTATCCGATAATATTACAGCCGACCCTCAATCAAAAAATCCATTGGCGGTCTCTCGAAGGTCTTCCAAACAGGTACCTCCAAAATTTTATTTCAAAACCATTCTTAGTGTCTTGTGAATTGTTTTGTGACGGCTTAGGCCCACTCCTAGTAGATATTGTCTTCTTTAAACTTTTCCTTTCGGGATTTCCTCAAGGTTTTTAAAACACGTTTGCTAGGGAAAGGTTTGCACACTCTTATAAAGGGTGTTTCGTTCTCCTCTCCAACCAATGTGGGGTCTTGACTTCGTTCCATAGGGTCACCCTCTGCCGTTTTCTTGTTCTTCTGAGTGTATTCTGAATCATAACACAATCTTGAGGCCTTTAAATCTTTGTTTCATTTGCAGAGGTGTTGTTCGATTTTATCCAAAAGGCCCATCATCTTGCCTCGTAGAAGTAAGCCTACAAAGCCCCAATTGACATGTTTGTATCCTTTTTGGTTAAATTATTGGAGATATCTTTACATTTTGATCCACCTAATGAAATCATGTGCTTGAAAAAGTAGATTAAACGTAATACACAGTGTCGGGTAATCATGCGCTTATTCTAGTTTTCTTGTTTGGTCGTTTTCAGCTGACTGTCTCTTATGAAGTTCCACCTCTTTTATCTCCAGTGGCATCTGTAAGCTTTCTAGCCAATTATTAGCTTGTAAACACATAATCAATCATGATTCTTGAAGAACACAATCCAAAATTCTCATATTCGTATGATTTTTGCAAATGCAGGCATTGCAACCTTTGCTTGAGAGATTACTTAAACGAGGTCTCGAAAGCTTTGCCACATTTGCTAAGAAATACCAAACGGCTTGATGACGGGTATTTGTGTCATATGGTATGGATATCACCATTTTTTACCAGATACTCTTATTGACAAATGTAAAATCTTGAACACAATACTTGAATACAATCATCTGTTTCAATAAGAAATTAATGTACTTTACAAAAATATTCTGAGTCCACCTGATTTATTGGGTTATATATATGTTCTTAATCTCAAAAAATTATTTACATCACAATAAATGGGATTGCGAGTTGTTACAGGAAGTGGTACACTCATTGGCATCCACTCTTATCCAACGATCTCTGCAAGCTACAAAGGGCTTGAGCAGAGAGGCTGCAGTATCTCAATTTTCGTTGCTGTGGTTGTGGAGAGTTGTCCCTATGGAAACTAGAGAAGCAAACAATAACAACGGTGAGATTATCGAATGAGTCTAGTCCCAAAGCCCGCAGGACGAGATCTCGAGCGCAACGCTCAGGGTTGTCATGTCGCTGAAGTCCCCGGCGAACTACATCGACTGCATGTTGGCTCGACATCACGTCCCAAATCCCGTCGCAGGCTATGATTAAGAACTCATCCTCCTCTGTTAGAACCACCTGCCTGCATTCTGGTTCTGCAATGAGGGGTGAAGGAGAACCATGGGGGAGGAGCTTCATGTCCCAATCCCCCAAGGCTCTGGAAACTGATAAAAGGCCGTTAAGATAGCCACCGTCGACGAAGCCACCCAACTCTTCTACTCGTTCCTTCTCCGGTGAATAAATTGGCCTGTGGTCTTGAGACATATCTACTGCCTCTCCCTTCCGACTAAGAACAGCCCGGCAATCTCCAACATTAGCCACCATTAGAAGCCTGAAGAACAGAAACATATGGTCAACAACATAGCTAGCTACCTCCTATTTGTGAGTTCTCCCAATCATATGAACAATGCAGTGCTATTCTACAAAGTGGCTAGAGATGATAATCTAAATAGACAGTGGAAACCAGGAACAAGACAGCATAATCGTATGAGTAGGTCAACAAAA

mRNA sequence

TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGTTTCACCATTTCACCAATCATTTCCAGTCTTCGTTCGTCTGCGTCTCTGACGGCCTTGATATTGTTGTGGCTCTGAAAAGAGGGAGAGATTTTCAGAGGCTGTTCTTGCATTTGGTGCCCTCAACTCTCTGCTCACCACTCCCTTTCTGTCCAGTCGCTCTCTTCTTCTTCTTCACGAATTTCAAATCTCAGTATGTCACTTGCAGCTCTCACCTGTAATTCGAATCCAAACACTCTGAATCTCAGTCATCGATCGATCAGAAGGAGCAATGGCGTTTTATTCATGGCGATTCCCACTCGCAGAACCATCAATTCGAGGTCACTATCTCTTCCCAAGCTCCTCTTCAGAATCCCCCGGGGTTCTTCGAAGTGCCGCAGAAACCCCATTTCCCCTCGAGTTAAATTCGTCTCCCCTGTGATGGAATGGCAGAATTGCACGTTTGTTGGTATAACCAGGAAATGTGATGAATGCAGGGCCAAGATGGAAGTAGACATTCCTGCCTCGGTTGCTTATAAATGCTACTCAGATCGTGAAGCCATTCCCAAATGGATGCCCTTCATTTCATCTGTGAAGGTTTTGGAAGATAATCCTACTTTATCACGGTGAGGTGTTGTTCGATTTTATCCAAAAGGCCCATCATCTTGCCTCGTAGAACTGACTGTCTCTTATGAAGTTCCACCTCTTTTATCTCCAGTGGCATCTGCATTGCAACCTTTGCTTGAGAGATTACTTAAACGAGGTCTCGAAAGCTTTGCCACATTTGCTAAGAAATACCAAACGGCTTGATGACGGGTATTTGTGTCATATGGTATGGATATCACCATTTTTTACCAGATACTCTTATTGACAAATGTAAAATCTTGAACACAATACTTGAATACAATCATCTGTTTCAATAAGAAATTAATGTACTTTACAAAAATATTCTGAGTCCACCTGATTTATTGGGTTATATATATGTTCTTAATCTCAAAAAATTATTTACATCACAATAAATGGGATTGCGAGTTGTTACAGGAAGTGGTACACTCATTGGCATCCACTCTTATCCAACGATCTCTGCAAGCTACAAAGGGCTTGAGCAGAGAGGCTGCAGTATCTCAATTTTCGTTGCTGTGGTTGTGGAGAGTTGTCCCTATGGAAACTAGAGAAGCAAACAATAACAACGGTGAGATTATCGAATGAGTCTAGTCCCAAAGCCCGCAGGACGAGATCTCGAGCGCAACGCTCAGGGTTGTCATGTCGCTGAAGTCCCCGGCGAACTACATCGACTGCATGTTGGCTCGACATCACGTCCCAAATCCCGTCGCAGGCTATGATTAAGAACTCATCCTCCTCTGTTAGAACCACCTGCCTGCATTCTGGTTCTGCAATGAGGGGTGAAGGAGAACCATGGGGGAGGAGCTTCATGTCCCAATCCCCCAAGGCTCTGGAAACTGATAAAAGGCCGTTAAGATAGCCACCGTCGACGAAGCCACCCAACTCTTCTACTCGTTCCTTCTCCGGTGAATAAATTGGCCTGTGGTCTTGAGACATATCTACTGCCTCTCCCTTCCGACTAAGAACAGCCCGGCAATCTCCAACATTAGCCACCATTAGAAGCCTGAAGAACAGAAACATATGGTCAACAACATAGCTAGCTACCTCCTATTTGTGAGTTCTCCCAATCATATGAACAATGCAGTGCTATTCTACAAAGTGGCTAGAGATGATAATCTAAATAGACAGTGGAAACCAGGAACAAGACAGCATAATCGTATGAGTAGGTCAACAAAA

Coding sequence (CDS)

ATGTCACTTGCAGCTCTCACCTGTAATTCGAATCCAAACACTCTGAATCTCAGTCATCGATCGATCAGAAGGAGCAATGGCGTTTTATTCATGGCGATTCCCACTCGCAGAACCATCAATTCGAGGTCACTATCTCTTCCCAAGCTCCTCTTCAGAATCCCCCGGGGTTCTTCGAAGTGCCGCAGAAACCCCATTTCCCCTCGAGTTAAATTCGTCTCCCCTGTGATGGAATGGCAGAATTGCACGTTTGTTGGTATAACCAGGAAATGTGATGAATGCAGGGCCAAGATGGAAGTAGACATTCCTGCCTCGGTTGCTTATAAATGCTACTCAGATCGTGAAGCCATTCCCAAATGGATGCCCTTCATTTCATCTGTGAAGGTTTTGGAAGATAATCCTACTTTATCACGGTGA

Protein sequence

MSLAALTCNSNPNTLNLSHRSIRRSNGVLFMAIPTRRTINSRSLSLPKLLFRIPRGSSKCRRNPISPRVKFVSPVMEWQNCTFVGITRKCDECRAKMEVDIPASVAYKCYSDREAIPKWMPFISSVKVLEDNPTLSR

Homology

[Close]

BLAST of Cp4.1LG17g07670 vs. NCBI nr
Match: XP_023514604.1 (uncharacterized protein LOC111778852 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 242 bits (618), Expect = 6.69e-79
Identity = 125/137 (91.24%), Postives = 125/137 (91.24%), Query Frame = 0


Query: 1   MSLAALTCNSNPNTLNLSHRSIRRSNGVLFMAIPTRRTINSRSLSLPKLLFRIPRGSSKC 60
           MSLAALTCNSNPNTLNLSHRSIRRSNGVLFMAIPTRRTINSRSLSLPKLLFRIPRGSSKC
Sbjct: 1   MSLAALTCNSNPNTLNLSHRSIRRSNGVLFMAIPTRRTINSRSLSLPKLLFRIPRGSSKC 60

Query: 61  RRNPISPRVKFVSPVMEWQNCTFVGITRKCDECRAKMEVDIPASVAYKCYSDREAIPKWM 120
           RRNPISPRVKFVSPVMEWQNCT            AKMEVDIPASVAYKCYSDREAIPKWM
Sbjct: 61  RRNPISPRVKFVSPVMEWQNCT------------AKMEVDIPASVAYKCYSDREAIPKWM 120

Query: 121 PFISSVKVLEDNPTLSR 137
           PFISSVKVLEDNPTLSR
Sbjct: 121 PFISSVKVLEDNPTLSR 125

[Close]

BLAST of Cp4.1LG17g07670 vs. NCBI nr
Match: XP_022960550.1 (uncharacterized protein LOC111461253 [Cucurbita moschata])

HSP 1 Score: 238 bits (608), Expect = 2.22e-77
Identity = 123/137 (89.78%), Postives = 124/137 (90.51%), Query Frame = 0


Query: 1   MSLAALTCNSNPNTLNLSHRSIRRSNGVLFMAIPTRRTINSRSLSLPKLLFRIPRGSSKC 60
           MSLAALTCNSNPNTLNLSHRSIRRSNGVLFMAIPTRR+INSRSLSLPKLLFRIPR SSKC
Sbjct: 1   MSLAALTCNSNPNTLNLSHRSIRRSNGVLFMAIPTRRSINSRSLSLPKLLFRIPRSSSKC 60

Query: 61  RRNPISPRVKFVSPVMEWQNCTFVGITRKCDECRAKMEVDIPASVAYKCYSDREAIPKWM 120
           RRNPISPRVKFVSPVMEWQNCT            AKMEVDIPASVAYKCYSDREAIPKWM
Sbjct: 61  RRNPISPRVKFVSPVMEWQNCT------------AKMEVDIPASVAYKCYSDREAIPKWM 120

Query: 121 PFISSVKVLEDNPTLSR 137
           PFISSVKVLEDNPTLSR
Sbjct: 121 PFISSVKVLEDNPTLSR 125

[Close]

BLAST of Cp4.1LG17g07670 vs. NCBI nr
Match: KAG6593264.1 (hypothetical protein SDJN03_12740, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 235 bits (600), Expect = 3.47e-77
Identity = 122/137 (89.05%), Postives = 123/137 (89.78%), Query Frame = 0


Query: 1   MSLAALTCNSNPNTLNLSHRSIRRSNGVLFMAIPTRRTINSRSLSLPKLLFRIPRGSSKC 60
           MSLAALTCNSNPNTLNLSHRSIRRSNGVLFMAIPTRR+INSRSLSLPKLLFRIP  SSKC
Sbjct: 1   MSLAALTCNSNPNTLNLSHRSIRRSNGVLFMAIPTRRSINSRSLSLPKLLFRIPWSSSKC 60

Query: 61  RRNPISPRVKFVSPVMEWQNCTFVGITRKCDECRAKMEVDIPASVAYKCYSDREAIPKWM 120
           RRNPISPRVKFVSPVMEWQNCT            AKMEVDIPASVAYKCYSDREAIPKWM
Sbjct: 61  RRNPISPRVKFVSPVMEWQNCT------------AKMEVDIPASVAYKCYSDREAIPKWM 120

Query: 121 PFISSVKVLEDNPTLSR 137
           PFISSVKVLEDNPTLSR
Sbjct: 121 PFISSVKVLEDNPTLSR 125

[Close]

BLAST of Cp4.1LG17g07670 vs. NCBI nr
Match: XP_023004647.1 (uncharacterized protein LOC111497878 [Cucurbita maxima])

HSP 1 Score: 236 bits (602), Expect = 1.82e-76
Identity = 122/137 (89.05%), Postives = 123/137 (89.78%), Query Frame = 0


Query: 1   MSLAALTCNSNPNTLNLSHRSIRRSNGVLFMAIPTRRTINSRSLSLPKLLFRIPRGSSKC 60
           MSLAALTCNSNPNTLNLSHRSIRRSNGVLFMAIPTRR+IN RSLSLPKLLFRIPR SSKC
Sbjct: 1   MSLAALTCNSNPNTLNLSHRSIRRSNGVLFMAIPTRRSINLRSLSLPKLLFRIPRSSSKC 60

Query: 61  RRNPISPRVKFVSPVMEWQNCTFVGITRKCDECRAKMEVDIPASVAYKCYSDREAIPKWM 120
           RRNPISPRVKFVSPVMEWQNCT            AKMEVDIPASVAYKCYSDREAIPKWM
Sbjct: 61  RRNPISPRVKFVSPVMEWQNCT------------AKMEVDIPASVAYKCYSDREAIPKWM 120

Query: 121 PFISSVKVLEDNPTLSR 137
           PFISSVKVLEDNPTLSR
Sbjct: 121 PFISSVKVLEDNPTLSR 125

[Close]

BLAST of Cp4.1LG17g07670 vs. NCBI nr
Match: KAG7025614.1 (hypothetical protein SDJN02_12111, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 216 bits (550), Expect = 5.55e-69
Identity = 112/127 (88.19%), Postives = 113/127 (88.98%), Query Frame = 0


Query: 1   MSLAALTCNSNPNTLNLSHRSIRRSNGVLFMAIPTRRTINSRSLSLPKLLFRIPRGSSKC 60
           MSLAALTCNSNPNTLNLSHRSIRRSNGVLFMAIPTRR+INSRSLSLPKLLFRIP  SSKC
Sbjct: 13  MSLAALTCNSNPNTLNLSHRSIRRSNGVLFMAIPTRRSINSRSLSLPKLLFRIPWSSSKC 72

Query: 61  RRNPISPRVKFVSPVMEWQNCTFVGITRKCDECRAKMEVDIPASVAYKCYSDREAIPKWM 120
           RRNPISPRVKFVSPVMEWQNCT            AKMEVDIPASVAYKCYSDREAIPKWM
Sbjct: 73  RRNPISPRVKFVSPVMEWQNCT------------AKMEVDIPASVAYKCYSDREAIPKWM 127

Query: 121 PFISSVK 127
           PFISSVK
Sbjct: 133 PFISSVK 127

[Close]

BLAST of Cp4.1LG17g07670 vs. ExPASy TrEMBL
Match: A0A6J1H9D8 (uncharacterized protein LOC111461253 OS=Cucurbita moschata OX=3662 GN=LOC111461253 PE=3 SV=1)

HSP 1 Score: 238 bits (608), Expect = 1.08e-77
Identity = 123/137 (89.78%), Postives = 124/137 (90.51%), Query Frame = 0


Query: 1   MSLAALTCNSNPNTLNLSHRSIRRSNGVLFMAIPTRRTINSRSLSLPKLLFRIPRGSSKC 60
           MSLAALTCNSNPNTLNLSHRSIRRSNGVLFMAIPTRR+INSRSLSLPKLLFRIPR SSKC
Sbjct: 1   MSLAALTCNSNPNTLNLSHRSIRRSNGVLFMAIPTRRSINSRSLSLPKLLFRIPRSSSKC 60

Query: 61  RRNPISPRVKFVSPVMEWQNCTFVGITRKCDECRAKMEVDIPASVAYKCYSDREAIPKWM 120
           RRNPISPRVKFVSPVMEWQNCT            AKMEVDIPASVAYKCYSDREAIPKWM
Sbjct: 61  RRNPISPRVKFVSPVMEWQNCT------------AKMEVDIPASVAYKCYSDREAIPKWM 120

Query: 121 PFISSVKVLEDNPTLSR 137
           PFISSVKVLEDNPTLSR
Sbjct: 121 PFISSVKVLEDNPTLSR 125

[Close]

BLAST of Cp4.1LG17g07670 vs. ExPASy TrEMBL
Match: A0A6J1KR05 (uncharacterized protein LOC111497878 OS=Cucurbita maxima OX=3661 GN=LOC111497878 PE=3 SV=1)

HSP 1 Score: 236 bits (602), Expect = 8.80e-77
Identity = 122/137 (89.05%), Postives = 123/137 (89.78%), Query Frame = 0


Query: 1   MSLAALTCNSNPNTLNLSHRSIRRSNGVLFMAIPTRRTINSRSLSLPKLLFRIPRGSSKC 60
           MSLAALTCNSNPNTLNLSHRSIRRSNGVLFMAIPTRR+IN RSLSLPKLLFRIPR SSKC
Sbjct: 1   MSLAALTCNSNPNTLNLSHRSIRRSNGVLFMAIPTRRSINLRSLSLPKLLFRIPRSSSKC 60

Query: 61  RRNPISPRVKFVSPVMEWQNCTFVGITRKCDECRAKMEVDIPASVAYKCYSDREAIPKWM 120
           RRNPISPRVKFVSPVMEWQNCT            AKMEVDIPASVAYKCYSDREAIPKWM
Sbjct: 61  RRNPISPRVKFVSPVMEWQNCT------------AKMEVDIPASVAYKCYSDREAIPKWM 120

Query: 121 PFISSVKVLEDNPTLSR 137
           PFISSVKVLEDNPTLSR
Sbjct: 121 PFISSVKVLEDNPTLSR 125

[Close]

BLAST of Cp4.1LG17g07670 vs. ExPASy TrEMBL
Match: A0A6J1D2J2 (uncharacterized protein LOC111016984 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016984 PE=3 SV=1)

HSP 1 Score: 199 bits (507), Expect = 2.41e-62
Identity = 104/137 (75.91%), Postives = 113/137 (82.48%), Query Frame = 0


Query: 1   MSLAALTCNSNPNTLNLSHRSIRRSNGVLFMAIPTRRTINSRSLSLPKLLFRIPRGSSKC 60
           MS AA+TCNSNPN+ NLSH SI+R NGVL MAIPTRR+INS+S SLP+L+FRIPRGS K 
Sbjct: 1   MSFAAVTCNSNPNSPNLSHGSIKRRNGVLXMAIPTRRSINSKSPSLPELVFRIPRGSLKR 60

Query: 61  RRNPISPRVKFVSPVMEWQNCTFVGITRKCDECRAKMEVDIPASVAYKCYSDREAIPKWM 120
             NP  PRVKFVSPVMEWQNCT            AKMEVDIPASVAYKCYSDREAIPKWM
Sbjct: 61  STNPNFPRVKFVSPVMEWQNCT------------AKMEVDIPASVAYKCYSDREAIPKWM 120

Query: 121 PFISSVKVLEDNPTLSR 137
           PFISSVKV+EDNP+LSR
Sbjct: 121 PFISSVKVVEDNPSLSR 125

[Close]

BLAST of Cp4.1LG17g07670 vs. ExPASy TrEMBL
Match: A0A1S3CEM7 (uncharacterized protein LOC103499992 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499992 PE=3 SV=1)

HSP 1 Score: 199 bits (506), Expect = 3.42e-62
Identity = 104/137 (75.91%), Postives = 112/137 (81.75%), Query Frame = 0


Query: 1   MSLAALTCNSNPNTLNLSHRSIRRSNGVLFMAIPTRRTINSRSLSLPKLLFRIPRGSSKC 60
           MS+A LT NS PN+L L HRSIRR NG+LFMAIPT R+INSRS SLP L+F+IPR SSK 
Sbjct: 1   MSIAPLTSNSTPNSLILIHRSIRRRNGILFMAIPTSRSINSRSFSLPDLVFKIPRTSSKR 60

Query: 61  RRNPISPRVKFVSPVMEWQNCTFVGITRKCDECRAKMEVDIPASVAYKCYSDREAIPKWM 120
            RNPI PR+KFVSPVMEWQNCT            AKMEVDIPASVAYKCYSDREAIPKWM
Sbjct: 61  SRNPICPRLKFVSPVMEWQNCT------------AKMEVDIPASVAYKCYSDREAIPKWM 120

Query: 121 PFISSVKVLEDNPTLSR 137
           PFISSVKVLEDNP+LSR
Sbjct: 121 PFISSVKVLEDNPSLSR 125

[Close]

BLAST of Cp4.1LG17g07670 vs. ExPASy TrEMBL
Match: A0A0A0K6F1 (Polyketide_cyc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G414450 PE=3 SV=1)

HSP 1 Score: 189 bits (480), Expect = 2.67e-58
Identity = 101/137 (73.72%), Postives = 110/137 (80.29%), Query Frame = 0


Query: 1   MSLAALTCNSNPNTLNLSHRSIRRSNGVLFMAIPTRRTINSRSLSLPKLLFRIPRGSSKC 60
           MS+A LT NS+PN+L L HRSIRR NG++FMAIPT R+INSRS SLP L+F+IPR SSK 
Sbjct: 1   MSIAPLTSNSSPNSLILIHRSIRRRNGIIFMAIPTSRSINSRSFSLPDLVFKIPRTSSKR 60

Query: 61  RRNPISPRVKFVSPVMEWQNCTFVGITRKCDECRAKMEVDIPASVAYKCYSDREAIPKWM 120
            RNP+    KFVSPVMEWQNCT            AKMEVDIPASVAYKCYSDREAIPKWM
Sbjct: 61  SRNPL----KFVSPVMEWQNCT------------AKMEVDIPASVAYKCYSDREAIPKWM 120

Query: 121 PFISSVKVLEDNPTLSR 137
           PFISSVKVLEDNPTLSR
Sbjct: 121 PFISSVKVLEDNPTLSR 121

[Close]

BLAST of Cp4.1LG17g07670 vs. TAIR 10
Match: AT1G02475.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein )

HSP 1 Score: 77.4 bits (189), Expect = 9.9e-15
Identity = 54/139 (38.85%), Postives = 70/139 (50.36%), Query Frame = 0


Query: 1   MSLAALTCNSNPNTLNLSHRSIRRSNGVLFMAIPTRRTINSRSLSLPKLLFRIPRGSSKC 60
           MS+ A+    N NT+N   ++ +  N    +    +    S     PK L      SS  
Sbjct: 1   MSVVAI----NMNTINHLSKTCKTPNIQSPICFDRKPFSYSLIPLFPKTLNGFSSYSSSV 60

Query: 61  RRNP--ISPRVKFVSPVMEWQNCTFVGITRKCDECRAKMEVDIPASVAYKCYSDREAIPK 120
            R    I P+ +  S  MEWQ+C+             KMEVD+P SVAY  Y DRE+ PK
Sbjct: 61  SRRSRFIIPKRRRFSVSMEWQDCS------------VKMEVDVPVSVAYNFYLDRESFPK 120

Query: 121 WMPFISSVKVLEDNPTLSR 138
           WMPFISSV+VL+D P LSR
Sbjct: 121 WMPFISSVQVLKDKPDLSR 123

[Close]

BLAST of Cp4.1LG17g07670 vs. TAIR 10
Match: AT1G02470.2 (Polyketide cyclase/dehydrase and lipid transport superfamily protein )

HSP 1 Score: 77.0 bits (188), Expect = 1.3e-14
Identity = 55/143 (38.46%), Postives = 75/143 (52.45%), Query Frame = 0


Query: 2   SLAALTCNSNPNTLNLSHRSIRRSNGVLFMAIPTRRTINSRSLSLPKLLFRIPRGSSKCR 61
           S+A+ T ++  +T  L  R I +S  VL M       ++  S S P++L  +   S+   
Sbjct: 3   SIASGTVSTTRST--LCFRKIPKSATVLSM-------LHRSSSSSPRMLLLLSSSSANSA 62

Query: 62  R-------NPISPRVKFVSPVMEWQNCTFVGITRKCDECRAKMEVDIPASVAYKCYSDRE 121
           +         IS   K   PVM+WQ+ T           R KM VD PASVAYK Y+DRE
Sbjct: 63  KLLNSNNGLLISSSPKPFRPVMQWQDVT-----------RVKMVVDAPASVAYKLYADRE 122

Query: 122 AIPKWMPFISSVKVLEDNPTLSR 138
             PKWMPF+SSV+ +E +P LSR
Sbjct: 123 MFPKWMPFLSSVEAMEGSPDLSR 125

[Close]

BLAST of Cp4.1LG17g07670 vs. TAIR 10
Match: AT4G01883.1 (Polyketide cyclase / dehydrase and lipid transport protein )

HSP 1 Score: 75.5 bits (184), Expect = 3.8e-14
Identity = 46/107 (42.99%), Postives = 62/107 (57.94%), Query Frame = 0


Query: 37  RTINSRSLSLPKLLFRIPRGSSKCRRNPISPRVKFVSPVMEWQNCTFVGITRKCD----- 96
           RT +SRS          P  SS  +  P++   +F SP++         + R+ D     
Sbjct: 22  RTFHSRSNFAKPSSRLFPSSSSPMK--PLTLASRF-SPLISTNRSFKSSVFRRFDTLMEW 81

Query: 97  -ECRAKMEVDIPASVAYKCYSDREAIPKWMPFISSVKVLEDNPTLSR 138
            EC+ KM+V++P SVAY  YS+RE+IPKWM FISSVKVL+D P LSR
Sbjct: 82  QECKVKMKVEVPVSVAYGLYSERESIPKWMTFISSVKVLKDKPDLSR 125

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BLAST of Cp4.1LG17g07670 vs. TAIR 10
Match: AT1G02470.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein )

HSP 1 Score: 74.3 bits (181), Expect = 8.4e-14
Identity = 54/143 (37.76%), Postives = 74/143 (51.75%), Query Frame = 0


Query: 2   SLAALTCNSNPNTLNLSHRSIRRSNGVLFMAIPTRRTINSRSLSLPKLLFRIPRGSSKCR 61
           S+A+ T ++  +T  L  R I +S  VL M       ++  S S P++L  +   S+   
Sbjct: 3   SIASGTVSTTRST--LCFRKIPKSATVLSM-------LHRSSSSSPRMLLLLSSSSANSA 62

Query: 62  R-------NPISPRVKFVSPVMEWQNCTFVGITRKCDECRAKMEVDIPASVAYKCYSDRE 121
           +         IS   K   PVM+WQ+ T             KM VD PASVAYK Y+DRE
Sbjct: 63  KLLNSNNGLLISSSPKPFRPVMQWQDVT------------VKMVVDAPASVAYKLYADRE 122

Query: 122 AIPKWMPFISSVKVLEDNPTLSR 138
             PKWMPF+SSV+ +E +P LSR
Sbjct: 123 MFPKWMPFLSSVEAMEGSPDLSR 124

The following BLAST results are available for this feature:

BLAST of Cp4.1LG17g07670 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG17g07670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023514604.1	6.69e-79	91.24	uncharacterized protein LOC111778852 [Cucurbita pepo subsp. pepo]	[more]
XP_022960550.1	2.22e-77	89.78	uncharacterized protein LOC111461253 [Cucurbita moschata]	[more]
KAG6593264.1	3.47e-77	89.05	hypothetical protein SDJN03_12740, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023004647.1	1.82e-76	89.05	uncharacterized protein LOC111497878 [Cucurbita maxima]	[more]
KAG7025614.1	5.55e-69	88.19	hypothetical protein SDJN02_12111, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Cp4.1LG17g07670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H9D8	1.08e-77	89.78	uncharacterized protein LOC111461253 OS=Cucurbita moschata OX=3662 GN=LOC1114612...	[more]
A0A6J1KR05	8.80e-77	89.05	uncharacterized protein LOC111497878 OS=Cucurbita maxima OX=3661 GN=LOC111497878...	[more]
A0A6J1D2J2	2.41e-62	75.91	uncharacterized protein LOC111016984 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A1S3CEM7	3.42e-62	75.91	uncharacterized protein LOC103499992 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0K6F1	2.67e-58	73.72	Polyketide_cyc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G414...	[more]

BLAST of Cp4.1LG17g07670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G02475.1	9.9e-15	38.85	Polyketide cyclase/dehydrase and lipid transport superfamily protein	[more]
AT1G02470.2	1.3e-14	38.46	Polyketide cyclase/dehydrase and lipid transport superfamily protein	[more]
AT4G01883.1	3.8e-14	42.99	Polyketide cyclase / dehydrase and lipid transport protein	[more]
AT1G02470.1	8.4e-14	37.76	Polyketide cyclase/dehydrase and lipid transport superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023393	START-like domain superfamily	GENE3D	3.30.530.20		coord: 92..137 e-value: 1.4E-6 score: 30.1
None	No IPR available	PANTHER	PTHR33824	POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORT SUPERFAMILY PROTEIN	coord: 13..137
None	No IPR available	SUPERFAMILY	55961	Bet v1-like	coord: 95..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG17g07670.1	Cp4.1LG17g07670.1	mRNA