Cp4.1LG17g06920 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG17g06920
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Cell division protein like
Location	Cp4.1LG17: 6329251 .. 6330539 (+)
RNA-Seq Expression	Cp4.1LG17g06920
Synteny	Cp4.1LG17g06920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACGGTCGTACGACTCCATGCCCCAATGGATAAGGCGCTGGTCTACGAAACCAGAGATTCTGGGTTCGATCCCCAGTGGAGTCGTTTTCATTTTTTTATCAGCTTATTTTTCTTTGAAAATGGGGGAAGCAAACGACGCCGTTCTGCATGCTATAAATTTCTCCGTCTTAGTCACATTACTAAAATTTCAGACATGCCAGTTCTATTTTCTCGACTGGGAAATTCCATCCCCTTCTCCGGCCTTTTCAGGTAATTCCTCAAAACTTGTTTCTAGAGATTCTCTTACCAGCGTTGTTTGTTGAAAACTTTCTGTAATCTATAACTTTTGGACCAAGAAATGTTTATTCCAATGAATAATGTTACTGATGATTTGGTTTGCTTAGTAATACAATCGCGTCGGTCAAATTCTTGTTAATTTGTAATATTGATGTCATGCCGAGTGCCGGAATCGCAGTTTTATCACCAAGTTTATGTGCATGTCTTTGTAAATTTGATTTTGGTGGCTCTGTTATTTCTTTTGCTTGAGAGATGCTAATTTCTAAATCGAAAAATCGTTGGTACTATGCTTATGCTGAATTAATGTGATTTTTCATGCAAAATCTGATGGTAAGGGGCTCTAGAAGTGTTCTGTACAAACAGGTTTTGGTTAGTGGAACAAAATTTTTATTGAACGAGGTCTGGTTAGCTACTTTTTTCAAGTTAATTCTCTTCGATGTTTTTGTGGATGGTCTATTTCTGTGAACTAAAATTCTTGCATACTTGTGAATATTGATTTTAAGTTTAGATCAGCTTTAACTCTTATATGAAGAAAAGTGCACAATAACCTTAACTTTACAGCCCACCTAATTATTTCTAATCGCAGTTTTAAAAAACAGAAGCATAAAGTTGTTTGTCTAGGACAACTCTTAATGTTTTTCTTTCCCCGTATAGGCAACTGGAGCAAGAGATGGAAACTGTCATAAGGGTTTTGCAGCCTGGACCTTTGGGGATTATTGAACACAAGTTTTCTGCTGAGGAGATTCGCCGGGCACAAGCCACTGTTCGCGAAGCAGTAAATAACTGGCGAAGGAATACAAGTATTGAAAAACAAAGTAGTATGTCAAGTAATCGTATTTAGGAATTATACTGTTTCCATAGAGATTTTGAATGACATGTTGTGTAATTGCTTTATGAGTTTCTGAATAAAAATTAGATTAAATAGTGACATTTACTAAACTTGAAATAAAAATTGAACTCAAAAGTATGATATTGATAAAAATAGTAAGCCTACAGAGCATTTTACTTTCACT

mRNA sequence

CACGGTCGTACGACTCCATGCCCCAATGGATAAGGCGCTGGTCTACGAAACCAGAGATTCTGGGTTCGATCCCCAGTGGAGTCGTTTTCATTTTTTTATCAGCTTATTTTTCTTTGAAAATGGGGGAAGCAAACGACGCCGTTCTGCATGCTATAAATTTCTCCGTCTTAGTCACATTACTAAAATTTCAGACATGCCAGTTCTATTTTCTCGACTGGGAAATTCCATCCCCTTCTCCGGCCTTTTCAGGCAACTGGAGCAAGAGATGGAAACTGTCATAAGGGTTTTGCAGCCTGGACCTTTGGGGATTATTGAACACAAGTTTTCTGCTGAGGAGATTCGCCGGGCACAAGCCACTGTTCGCGAAGCAGTAAATAACTGGCGAAGGAATACAAGTATTGAAAAACAAAGTAGTATGTCAAGTAATCGTATTTAGGAATTATACTGTTTCCATAGAGATTTTGAATGACATGTTGTGTAATTGCTTTATGAGTTTCTGAATAAAAATTAGATTAAATAGTGACATTTACTAAACTTGAAATAAAAATTGAACTCAAAAGTATGATATTGATAAAAATAGTAAGCCTACAGAGCATTTTACTTTCACT

Coding sequence (CDS)

ATGGATAAGGCGCTGGTCTACGAAACCAGAGATTCTGGGTTCGATCCCCAGTGGAGTCGTTTTCATTTTTTTATCAGCTTATTTTTCTTTGAAAATGGGGGAAGCAAACGACGCCGTTCTGCATGCTATAAATTTCTCCGTCTTAGTCACATTACTAAAATTTCAGACATGCCAGTTCTATTTTCTCGACTGGGAAATTCCATCCCCTTCTCCGGCCTTTTCAGGCAACTGGAGCAAGAGATGGAAACTGTCATAAGGGTTTTGCAGCCTGGACCTTTGGGGATTATTGAACACAAGTTTTCTGCTGAGGAGATTCGCCGGGCACAAGCCACTGTTCGCGAAGCAGTAAATAACTGGCGAAGGAATACAAGTATTGAAAAACAAAGTAGTATGTCAAGTAATCGTATTTAG

Protein sequence

MDKALVYETRDSGFDPQWSRFHFFISLFFFENGGSKRRRSACYKFLRLSHITKISDMPVLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRRAQATVREAVNNWRRNTSIEKQSSMSSNRI

Homology

[Close]

BLAST of Cp4.1LG17g06920 vs. NCBI nr
Match: XP_023513754.1 (uncharacterized protein LOC111778268 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 154 bits (389), Expect = 4.64e-46
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 57  MPVLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRRAQATVREAV 116
           MPVLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRRAQATVREAV
Sbjct: 1   MPVLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRRAQATVREAV 60

Query: 117 NNWRRNTSIEKQSSMSSNRI 136
           NNWRRNTSIEKQSSMSSNRI
Sbjct: 61  NNWRRNTSIEKQSSMSSNRI 80

[Close]

BLAST of Cp4.1LG17g06920 vs. NCBI nr
Match: KAG6593168.1 (hypothetical protein SDJN03_12644, partial [Cucurbita argyrosperma subsp. sororia] >KAG6593174.1 hypothetical protein SDJN03_12650, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025565.1 hypothetical protein SDJN02_12061, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 152 bits (385), Expect = 1.89e-45
Identity = 79/80 (98.75%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 57  MPVLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRRAQATVREAV 116
           MPVLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRRAQATVREAV
Sbjct: 1   MPVLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRRAQATVREAV 60

Query: 117 NNWRRNTSIEKQSSMSSNRI 136
           NNWRRNTSIEKQSS+SSNRI
Sbjct: 61  NNWRRNTSIEKQSSVSSNRI 80

[Close]

BLAST of Cp4.1LG17g06920 vs. NCBI nr
Match: XP_022959944.1 (uncharacterized protein LOC111460845 [Cucurbita moschata])

HSP 1 Score: 150 bits (378), Expect = 2.20e-44
Identity = 78/80 (97.50%), Postives = 79/80 (98.75%), Query Frame = 0


Query: 57  MPVLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRRAQATVREAV 116
           MP LFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIR+AQATVREAV
Sbjct: 1   MPGLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRQAQATVREAV 60

Query: 117 NNWRRNTSIEKQSSMSSNRI 136
           NNWRRNTSIEKQSSMSSNRI
Sbjct: 61  NNWRRNTSIEKQSSMSSNRI 80

[Close]

BLAST of Cp4.1LG17g06920 vs. NCBI nr
Match: XP_023004711.1 (uncharacterized protein LOC111497926 [Cucurbita maxima])

HSP 1 Score: 141 bits (356), Expect = 4.26e-41
Identity = 73/75 (97.33%), Postives = 73/75 (97.33%), Query Frame = 0


Query: 57  MPVLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRRAQATVREAV 116
           MPVLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIR AQATVREAV
Sbjct: 1   MPVLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRWAQATVREAV 60

Query: 117 NNWRRNTSIEKQSSM 131
           NNWRRNT IEKQSSM
Sbjct: 61  NNWRRNTCIEKQSSM 75

[Close]

BLAST of Cp4.1LG17g06920 vs. NCBI nr
Match: XP_038876733.1 (uncharacterized protein LOC120069118 [Benincasa hispida])

HSP 1 Score: 137 bits (344), Expect = 3.03e-39
Identity = 68/73 (93.15%), Postives = 72/73 (98.63%), Query Frame = 0


Query: 57  MPVLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRRAQATVREAV 116
           MP+ FSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEE+R+AQ+TVREAV
Sbjct: 1   MPISFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEMRQAQSTVREAV 60

Query: 117 NNWRRNTSIEKQS 129
           NNWRRNTSIEKQS
Sbjct: 61  NNWRRNTSIEKQS 73

[Close]

BLAST of Cp4.1LG17g06920 vs. ExPASy TrEMBL
Match: A0A6J1H9I7 (uncharacterized protein LOC111460845 OS=Cucurbita moschata OX=3662 GN=LOC111460845 PE=4 SV=1)

HSP 1 Score: 150 bits (378), Expect = 1.06e-44
Identity = 78/80 (97.50%), Postives = 79/80 (98.75%), Query Frame = 0


Query: 57  MPVLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRRAQATVREAV 116
           MP LFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIR+AQATVREAV
Sbjct: 1   MPGLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRQAQATVREAV 60

Query: 117 NNWRRNTSIEKQSSMSSNRI 136
           NNWRRNTSIEKQSSMSSNRI
Sbjct: 61  NNWRRNTSIEKQSSMSSNRI 80

[Close]

BLAST of Cp4.1LG17g06920 vs. ExPASy TrEMBL
Match: A0A6J1KSW4 (uncharacterized protein LOC111497926 OS=Cucurbita maxima OX=3661 GN=LOC111497926 PE=4 SV=1)

HSP 1 Score: 141 bits (356), Expect = 2.06e-41
Identity = 73/75 (97.33%), Postives = 73/75 (97.33%), Query Frame = 0


Query: 57  MPVLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRRAQATVREAV 116
           MPVLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIR AQATVREAV
Sbjct: 1   MPVLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRWAQATVREAV 60

Query: 117 NNWRRNTSIEKQSSM 131
           NNWRRNT IEKQSSM
Sbjct: 61  NNWRRNTCIEKQSSM 75

[Close]

BLAST of Cp4.1LG17g06920 vs. ExPASy TrEMBL
Match: A0A0A0K7N1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394630 PE=4 SV=1)

HSP 1 Score: 137 bits (344), Expect = 1.60e-39
Identity = 70/78 (89.74%), Postives = 75/78 (96.15%), Query Frame = 0


Query: 57  MPVLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRRAQATVREAV 116
           M + FSRLG+SIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEE+RRAQ+TVREAV
Sbjct: 1   MAISFSRLGSSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEMRRAQSTVREAV 60

Query: 117 NNWRRNTSIEKQSSMSSN 134
           NNWRRNT IEKQSS+SSN
Sbjct: 61  NNWRRNTIIEKQSSISSN 78

[Close]

BLAST of Cp4.1LG17g06920 vs. ExPASy TrEMBL
Match: A0A1S3BRC3 (uncharacterized protein LOC103492858 OS=Cucumis melo OX=3656 GN=LOC103492858 PE=4 SV=1)

HSP 1 Score: 137 bits (344), Expect = 1.60e-39
Identity = 70/78 (89.74%), Postives = 74/78 (94.87%), Query Frame = 0


Query: 57  MPVLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRRAQATVREAV 116
           M + FSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEE+RRAQ+TVREAV
Sbjct: 1   MAISFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEMRRAQSTVREAV 60

Query: 117 NNWRRNTSIEKQSSMSSN 134
           NNWRRNT IEKQS +SSN
Sbjct: 61  NNWRRNTLIEKQSCISSN 78

[Close]

BLAST of Cp4.1LG17g06920 vs. ExPASy TrEMBL
Match: A0A6A1US20 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR8G023490 PE=4 SV=1)

HSP 1 Score: 139 bits (351), Expect = 1.63e-39
Identity = 82/152 (53.95%), Postives = 92/152 (60.53%), Query Frame = 0


Query: 1   MDKALVYETRDSGFDPQWSRFHFFIS--LFFFENGGSKRR----------------RSAC 60
           MDKALVY TRDSGFDPQWSR     S  L   E  G  +                    C
Sbjct: 1   MDKALVYGTRDSGFDPQWSRIIIIFSKKLLIIELNGVVQEGGPVISKPILSGVWILEEVC 60

Query: 61  YKFLRLSHITKI------SDMPVLFSRLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGII 120
               +L  +  I      +DM +  SRLGNS+PF  LFRQLEQEMETVI VLQPGPLGII
Sbjct: 61  STGPQLRSLVGIETVHLPADMTISLSRLGNSLPFPKLFRQLEQEMETVINVLQPGPLGII 120

Query: 121 EHKFSAEEIRRAQATVREAVNNWRRNTSIEKQ 128
           EHKFSAEEIR+A ATVR AV NWRRN  +E++
Sbjct: 121 EHKFSAEEIRQAHATVRNAVENWRRNAKLEQK 152

[Close]

BLAST of Cp4.1LG17g06920 vs. TAIR 10
Match: AT3G62920.1 (unknown protein; Has 25 Blast hits to 25 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 93.6 bits (231), Expect = 1.3e-19
Identity = 44/74 (59.46%), Postives = 59/74 (79.73%), Query Frame = 0


Query: 63  RLGNSIPFSGLFRQLEQEMETVIRVLQPGPLGIIEHKFSAEEIRRAQATVREAVNNWRRN 122
           R+  ++PFSG+ RQLE+E ETVI VLQPGPLGIIEHKFSA+EIR A+ATV  AV++WRR+
Sbjct: 5   RIARALPFSGILRQLEKEAETVINVLQPGPLGIIEHKFSAQEIREAKATVSRAVDSWRRH 64

Query: 123 TSIEKQSSMSSNRI 137
           + +E  + +  + I
Sbjct: 65  SEVEHANGLLKDYI 78

The following BLAST results are available for this feature:

BLAST of Cp4.1LG17g06920 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG17g06920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023513754.1	4.64e-46	100.00	uncharacterized protein LOC111778268 [Cucurbita pepo subsp. pepo]	[more]
KAG6593168.1	1.89e-45	98.75	hypothetical protein SDJN03_12644, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022959944.1	2.20e-44	97.50	uncharacterized protein LOC111460845 [Cucurbita moschata]	[more]
XP_023004711.1	4.26e-41	97.33	uncharacterized protein LOC111497926 [Cucurbita maxima]	[more]
XP_038876733.1	3.03e-39	93.15	uncharacterized protein LOC120069118 [Benincasa hispida]	[more]

BLAST of Cp4.1LG17g06920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H9I7	1.06e-44	97.50	uncharacterized protein LOC111460845 OS=Cucurbita moschata OX=3662 GN=LOC1114608...	[more]
A0A6J1KSW4	2.06e-41	97.33	uncharacterized protein LOC111497926 OS=Cucurbita maxima OX=3661 GN=LOC111497926...	[more]
A0A0A0K7N1	1.60e-39	89.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394630 PE=4 SV=1	[more]
A0A1S3BRC3	1.60e-39	89.74	uncharacterized protein LOC103492858 OS=Cucumis melo OX=3656 GN=LOC103492858 PE=...	[more]
A0A6A1US20	1.63e-39	53.95	Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR8G023490 PE=4 SV=1	[more]

BLAST of Cp4.1LG17g06920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62920.1	1.3e-19	59.46	unknown protein; Has 25 Blast hits to 25 proteins in 11 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37235	ZINC METALLOPROTEINASE AUREOLYSIN	coord: 57..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG17g06920.1	Cp4.1LG17g06920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051301	cell division