Cp4.1LG17g04610 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG17g04610
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	RING-type E3 ubiquitin transferase
Location	Cp4.1LG17: 3426521 .. 3430940 (+)
RNA-Seq Expression	Cp4.1LG17g04610
Synteny	Cp4.1LG17g04610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATTAACCAACCACTGCGACGGTGGTGGATTGCTCGAAGAAAAATTCCCTCCACTGCGCTACCCGTTTTCCCAAATTCTGCAGTTCTCCTCCGAGTTGGCCTGCGTTATCTCCCGCCATTTGCCGGCAAATCGCCGCCGCACTGACTCGGCGGTTGTGTCGGTCGCCATCTACAACGCATTCAAGGAGGGAACTGTTTTCACCGCCACAGAGACGCGGAATTCACTAATGTCCTCATCGGAGCAAGCCCTCGTCTCTCTACTCTCCCGATTTGCTTTATCGTTTGATGGAGCTGCTTTGGGCGCAGCCCTAGCCTACGCTGCGTTTCGTACCGTCCTCAAACTCACTGCTTCCTGCTCTGCTCTCGATGAGCTCCGTAAAGCTCCAAATGTAAGAGTATCTGATCTTCGCCATATGATTTCCGATGGAGATTCGCGACAATCCGAGTCCGATCAAAAGCTTGTTGTAGTTCGTGGCACCGTGGAGGCCAGGTCGTTTGTGGAAGGTAATTGGAAGAGCTTGCAGCCTAATGTATTGATTTCTCAGGAGTCCGGAGATAGAGCAGTGATTATTCAGCGTACGCAAATGGTAAAATCTCCTATGGTATTTTTGTTAGGCACTGCGTGACTGTGTTAAGATGTTTTTTTTGGGCTGCAGTTCTTCTGGAGGTGGATAAGTGAAAACTGAGCTATGCAGTTTAGAGGATTGCCCGATTAAATTCAATATTATTCCGTTTGTTAGAATCATACGAATGCAGAGTGTTGTGTTAGTATTTGAGTTACTTGATAGCACTACTAAAAGTTGCCATTGAAGTCTAACCGATTAATCAATAACTCGTGAACTCGTGCATCGTTAAATTCTTTTCACATTATGAGGTCTCTAGTAACGTCCTTAAGTTCAGGAGCAATAATGATACGATTCTAGTCTGGATGAACAATGAAATGAGAAGAATCATGGGTGAAATGATATGATTCTAGTCTGCATAGGTCTTCTGGCTTGCCTGTATTTGTTCTATCATCATATATAATATATAGCTACGGTATGCGGATTAAATATTTGGGAAACCTTGAACTCTTAAATCAATTGTAAAATCTTGGAGAAAATGAGTTTCTGTTTTCTCAGGCGAACTATCATAACCTAATTGGTTCTGCAAGTGTCTGTTTTTGTTCCCCTTTGCTATTCAGTATTGTGAATGTGTTGTGTGTGTACATAATATCCAGTTTTATAAACTAAAGCTTATTGGGTTGTAACTTGTGGCATTGTTTAGTGCATATTCAACGAATGGAAGGGCTTTCTTGGATGGACTTCTGATTTACGTGCAATTTTTGGAAGAACCTTTAGAAAGCAAGAGTCAACATCATTCAGAACGGTAAAATTTAGCTTCTCTCTGTTATTGCTATGGTTAGTTCACTCTTTTTGTCCTTAATAATAAAAGATCTTTGTATTCAATACCTTTTAAGCTTGAATGATATGGAACTTTGTTATTCTGTCTGTGAATAAAGAGCAAATTGAAGTTGAATGATTTTTTTCTGAGGGCATCTCTTATATGTGGCCATTCTGTTAGGTCCTTTTCCTGTGATTGTCTATTGGATCTTCTTTTTCCCTTGCTTGTGGCGCGTGCAAGTAGGTTTGTAAGTGCTATCTCTTCAGAAAGGGGTCCAAACCGAGTAGGCTTGAAGGTATACCCCATAGTGTCAAGAAATAAGGAATTTATTGTAGCTAACTTTTTGTTTATAAAAACTAAATGTACTTCATATGAGATTGATGTGTGGCAGTTGTGATTTGTGAAGACTGAAGGTAAAATATATATTTTAGATATCTGGTTGAGCAGAAGGGAGCTATATTCCTGTGGTGATTGTACCAGAATTGAGTGCAGTTTACACATTACGTTTTATCTTATGTGATGCTGATATTTGTGAAAAAATTTAACAGGTTCCTTTTGTTCTTGTTGAGGGTCATTCCCCGTATTCTGATTTTGTTGTTGTTAACATGGATGGCTCAAGACATCGTTTGCCTCTTACAACTGTGTATCGTCAACTGCAACCCGTTTGTGCTACTCCTTATACCTTCCTTCAAGCACTTTTTGGTCACGAGTACCCTGTGAGTTAGGCAATCTATATTGAATTGAAAACATCTTTTTCTTTCTTTTTATTAATGGATTTTATCTAAAAATTCTTTATCATGTTCTACTTTTGAAGGTTGGGGTGCTTGATGAGGAGAAAATACTTCCATTAGGGAGAAATATCAGTGTTGTTGGCGTATGCAGTTTTAAAAATGGAGTTCCTGAGATAAAGTCATGCAAGGATTTTCCCCACTTCCTGTAAGTTTATGCATTTTGAAGTAGAAATAACGTTGAGAAGGTCAAGATTATGTAATGTAATTTATGAAGGTAAACCATTGATGCATATAATTAATTCTTTCCCATGACTCATCCACATAAAATTGACAATAAATGTGTTCTGTATTCCAATAGTGAGCCCCATTGATTTGGCTTTAGTGCTCTGTTTGGGATTTATGAATAGAAAGCTTTCGTGGTCTGTTGGAGTGTGGATTTTGGTTTATTCTTGCGTTAGCCAACACATATTGTCTCATCAGTGATGCTAGCAAATGGCTAGTCTCTCCCACACCCACCCAAAGTAACCCACGCATGAGTGACTATGGGGAACAGTGTCTAATTTGTCCTTAGAGATAATCTTCATTGAAAAAACGGGTACTATGATGACTTACTTTTCCTTGCAGATGTGAAATGACTAAAGATCAGATGGTTTTAGATCTTGTCTTCAAAACAAAATTTCTGTTCTGGAGTAGTATTGTCCTTGGTTCGTTGTCAGTTGGTGTTCTTGGCTGTTCTGTTATGAGGTATGTTATCTTTCTTTCTTTCTGATACGTGGAAGTCACTATAAGGGGAGTAAGATTCGGATTATCTTGTTGATCGAATATCTCAAGACAAGAACATTGTTTGAGATTCGAATCACTCCACAAGCAAGATCGATCATGTCTAGCTTGAATGATTCTTGTTGATCAAATATCTCAACGCAAGAACACTTGATTGAGATTCGAATCACTCCACAAGCAAGATTGATCATGTCGAGCGTGAATGATTCTACATGCAACCTAACTACATAGAATTGCAAAGAAACTTAGCCATTGGCTAAAAAAAGCAACTACATTTTTCAAGTCTACTTACAAATACAATATACATCTTTATATAGCCTCAAAATGAAACTATTAAAGACATTCCAAGAGTTCTAACATTCATACTTAATGGTCACCGTTATGTAATTGTAAAGTAAATAAAAAGTTTTAAAATATATTAATGAAATACAATAACTCTAAATTACTCTAAATGGTAATCTACCCAAAATTTATAACATGAAATTTCATTTTTATTTTTCTTCAACGTGACATGAATTGGAATATCTTTTGATAATTTCAACAATATTTTCTTCGCATCTTAATTGAAGTATGTTGTATGATTGATGTCTCTTGGTTCATATCACTCTCTTTTATTTTATTGTCAGTCAAACTGTGGCGAGGTATCTTAAATGTTGGTAATTTTTGTAGGCAACGCAATGCACTTGTAATATATGCCATCCATGAAATGTTTATTTTGCTTGGCACTCTGCTTTCTGTTGCATTTTCGTTTGCTGGAGAGTTGTAGAAGAGTATCAGTGATTCTTCAACTTTTATTTTTTTAGCAGTGAATTTCTCTTGCTTTTATGAACAAACTATTGTTCTTATTTGGTCCTCGAATGGAATGAATAAAAGCTTAGCTCTACTGCGTAGTGAGTGAGTGATGAATTATGAGATTACTCCCAAATTTACATATTATTCACCCTTTCTATGATTACATGAAAAATTTGATGAATGTTTGAACTTATTTGCGTCCATTCTCTTCAGAAATTGGAATAGATGGAAACAGTGGAGGCAACAGAGACGGTTACAGGATTCAGGGAATGATTCCACCATATCACAACTGGATTCAAGCAACAATGATCCCATCTATGGTGACTTTGGAACTGCATCAGACGACGAAGCAGCATCCATTCCAGATGACGAGTTATCATCGAACGTTCCAGATGGACAGTTGTGCGTGATCTGTCTCATGAGGAGAAGGCGATCTGCTTTCATTCCATGTGGTCATTTAGTTTGCTGTGAACGTTGTGCCATATCAGTCGAACGCGATTCAGCTCCCAAATGCCCCGTCTGTCGCCAGCAGATCCGTAGTTCTGTGCGAATATATGATTCATGAGAAGAAGCAAATTATTTCTCAGGTTCGAACTCATCTATATGGGAATCTCATTCATCTGGGTGGCCTTTCTTTGCTGATACTAAGATTTTATATATATGCAATGCAAGTGATTCCTGGGGCAGCAGTGATGGCTCTTGTAAATACCAGACAATATATACTCATTTATAC

mRNA sequence

ATATTAACCAACCACTGCGACGGTGGTGGATTGCTCGAAGAAAAATTCCCTCCACTGCGCTACCCGTTTTCCCAAATTCTGCAGTTCTCCTCCGAGTTGGCCTGCGTTATCTCCCGCCATTTGCCGGCAAATCGCCGCCGCACTGACTCGGCGGTTGTGTCGGTCGCCATCTACAACGCATTCAAGGAGGGAACTGTTTTCACCGCCACAGAGACGCGGAATTCACTAATGTCCTCATCGGAGCAAGCCCTCGTCTCTCTACTCTCCCGATTTGCTTTATCGTTTGATGGAGCTGCTTTGGGCGCAGCCCTAGCCTACGCTGCGTTTCGTACCGTCCTCAAACTCACTGCTTCCTGCTCTGCTCTCGATGAGCTCCGTAAAGCTCCAAATGTAAGAGTATCTGATCTTCGCCATATGATTTCCGATGGAGATTCGCGACAATCCGAGTCCGATCAAAAGCTTGTTGTAGTTCGTGGCACCGTGGAGGCCAGGTCGTTTGTGGAAGGTAATTGGAAGAGCTTGCAGCCTAATGTATTGATTTCTCAGGAGTCCGGAGATAGAGCAGTGATTATTCAGCGTACGCAAATGTGCATATTCAACGAATGGAAGGGCTTTCTTGGATGGACTTCTGATTTACGTGCAATTTTTGGAAGAACCTTTAGAAAGCAAGAGTCAACATCATTCAGAACGGTTCCTTTTGTTCTTGTTGAGGGTCATTCCCCGTATTCTGATTTTGTTGTTGTTAACATGGATGGCTCAAGACATCGTTTGCCTCTTACAACTGTGTATCGTCAACTGCAACCCGTTTGTGCTACTCCTTATACCTTCCTTCAAGCACTTTTTGGTCACGAGTACCCTGTTGGGGTGCTTGATGAGGAGAAAATACTTCCATTAGGGAGAAATATCAGTGTTGTTGGCGTATGCAGTTTTAAAAATGGAGTTCCTGAGATAAAGTCATGCAAGGATTTTCCCCACTTCCTATGTGAAATGACTAAAGATCAGATGGTTTTAGATCTTGTCTTCAAAACAAAATTTCTGTTCTGGAGTAGTATTGTCCTTGGTTCGTTAAATTGGAATAGATGGAAACAGTGGAGGCAACAGAGACGGTTACAGGATTCAGGGAATGATTCCACCATATCACAACTGGATTCAAGCAACAATGATCCCATCTATGGTGACTTTGGAACTGCATCAGACGACGAAGCAGCATCCATTCCAGATGACGAGTTATCATCGAACGTTCCAGATGGACAGTTGTGCGTGATCTGTCTCATGAGGAGAAGGCGATCTGCTTTCATTCCATGTGGTCATTTAGTTTGCTGTGAACGTTGTGCCATATCAGTCGAACGCGATTCAGCTCCCAAATGCCCCGTCTGTCGCCAGCAGATCCGTAGTTCTGTGCGAATATATGATTCATGAGAAGAAGCAAATTATTTCTCAGGTTCGAACTCATCTATATGGGAATCTCATTCATCTGGGTGGCCTTTCTTTGCTGATACTAAGATTTTATATATATGCAATGCAAGTGATTCCTGGGGCAGCAGTGATGGCTCTTGTAAATACCAGACAATATATACTCATTTATAC

Coding sequence (CDS)

ATATTAACCAACCACTGCGACGGTGGTGGATTGCTCGAAGAAAAATTCCCTCCACTGCGCTACCCGTTTTCCCAAATTCTGCAGTTCTCCTCCGAGTTGGCCTGCGTTATCTCCCGCCATTTGCCGGCAAATCGCCGCCGCACTGACTCGGCGGTTGTGTCGGTCGCCATCTACAACGCATTCAAGGAGGGAACTGTTTTCACCGCCACAGAGACGCGGAATTCACTAATGTCCTCATCGGAGCAAGCCCTCGTCTCTCTACTCTCCCGATTTGCTTTATCGTTTGATGGAGCTGCTTTGGGCGCAGCCCTAGCCTACGCTGCGTTTCGTACCGTCCTCAAACTCACTGCTTCCTGCTCTGCTCTCGATGAGCTCCGTAAAGCTCCAAATGTAAGAGTATCTGATCTTCGCCATATGATTTCCGATGGAGATTCGCGACAATCCGAGTCCGATCAAAAGCTTGTTGTAGTTCGTGGCACCGTGGAGGCCAGGTCGTTTGTGGAAGGTAATTGGAAGAGCTTGCAGCCTAATGTATTGATTTCTCAGGAGTCCGGAGATAGAGCAGTGATTATTCAGCGTACGCAAATGTGCATATTCAACGAATGGAAGGGCTTTCTTGGATGGACTTCTGATTTACGTGCAATTTTTGGAAGAACCTTTAGAAAGCAAGAGTCAACATCATTCAGAACGGTTCCTTTTGTTCTTGTTGAGGGTCATTCCCCGTATTCTGATTTTGTTGTTGTTAACATGGATGGCTCAAGACATCGTTTGCCTCTTACAACTGTGTATCGTCAACTGCAACCCGTTTGTGCTACTCCTTATACCTTCCTTCAAGCACTTTTTGGTCACGAGTACCCTGTTGGGGTGCTTGATGAGGAGAAAATACTTCCATTAGGGAGAAATATCAGTGTTGTTGGCGTATGCAGTTTTAAAAATGGAGTTCCTGAGATAAAGTCATGCAAGGATTTTCCCCACTTCCTATGTGAAATGACTAAAGATCAGATGGTTTTAGATCTTGTCTTCAAAACAAAATTTCTGTTCTGGAGTAGTATTGTCCTTGGTTCGTTAAATTGGAATAGATGGAAACAGTGGAGGCAACAGAGACGGTTACAGGATTCAGGGAATGATTCCACCATATCACAACTGGATTCAAGCAACAATGATCCCATCTATGGTGACTTTGGAACTGCATCAGACGACGAAGCAGCATCCATTCCAGATGACGAGTTATCATCGAACGTTCCAGATGGACAGTTGTGCGTGATCTGTCTCATGAGGAGAAGGCGATCTGCTTTCATTCCATGTGGTCATTTAGTTTGCTGTGAACGTTGTGCCATATCAGTCGAACGCGATTCAGCTCCCAAATGCCCCGTCTGTCGCCAGCAGATCCGTAGTTCTGTGCGAATATATGATTCATGA

Protein sequence

ILTNHCDGGGLLEEKFPPLRYPFSQILQFSSELACVISRHLPANRRRTDSAVVSVAIYNAFKEGTVFTATETRNSLMSSSEQALVSLLSRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDLRHMISDGDSRQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQMCIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLVEGHSPYSDFVVVNMDGSRHRLPLTTVYRQLQPVCATPYTFLQALFGHEYPVGVLDEEKILPLGRNISVVGVCSFKNGVPEIKSCKDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSLNWNRWKQWRQQRRLQDSGNDSTISQLDSSNNDPIYGDFGTASDDEAASIPDDELSSNVPDGQLCVICLMRRRRSAFIPCGHLVCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS

Homology

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BLAST of Cp4.1LG17g04610 vs. ExPASy Swiss-Prot
Match: Q9SYH3 (E3 ubiquitin-protein ligase SPL2 OS=Arabidopsis thaliana OX=3702 GN=SPL2 PE=2 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 4.7e-93
Identity = 195/414 (47.10%), Postives = 264/414 (63.77%), Query Frame = 0


Query: 77  MSSSEQALVSLLSRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL 136
           MSS E+AL++LL+  ALSFDGA LG  LA +A  + LK  ++ +AL +++ AP V +SDL
Sbjct: 1   MSSPERALLNLLTDIALSFDGAILGLTLAVSAVGSALKYASTNAALKKIKDAPEVSISDL 60

Query: 137 RHMI------SDGDSRQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVI 196
           R ++      S+ +  +  +DQ++VVVRG V+ +  + G+      NVLIS E+GD+A+I
Sbjct: 61  RSLLPASEDKSETNDNRKSNDQRIVVVRGVVKPK--ISGDEGYKNNNVLISPETGDKALI 120

Query: 197 IQRTQMCIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLV-EGHSPYSDFVVVN 256
           IQRTQ  +++ WK     T   R +  R+ RK  +   RTVPFV+V +     S FV VN
Sbjct: 121 IQRTQTYVYSGWKRLFQSTGH-RFMLERSLRKHGADFTRTVPFVIVGKDQQSNSSFVAVN 180

Query: 257 MDGSRHRLPLTTVYRQLQPVCATPYTFLQALFGHEYPVGVLDEEKILPLGRNISVVGVCS 316
           MDGSR  LPLTTVY +LQP+ +   +FLQA    +YPVG+LD EKILP G++I+ VG+ S
Sbjct: 181 MDGSRQPLPLTTVYNRLQPINS---SFLQAFLYPDYPVGLLDIEKILPPGKDITAVGIYS 240

Query: 317 FKNGVPEIKSCKDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSLN-----------W 376
           F NGVPEIKSC+D P+FL EMTKD+M+ DL+ +T F+F  S++LG ++           W
Sbjct: 241 FNNGVPEIKSCQDLPYFLSEMTKDKMIEDLMEQTNFIFLGSVILGIVSVGILSYAAVRTW 300

Query: 377 NRWKQWRQQRRLQDSGNDSTISQLDSSNNDPIYGDFGTASDDEAASIPDDELSSNVPDGQ 436
           N+WKQW  QR L    NDS +                   DDE    P+D  +  +PDG+
Sbjct: 301 NKWKQWNHQRELPQRPNDSVV-------------------DDE----PED--ADEIPDGE 360

Query: 437 LCVICLMRRRRSAFIPCGHLVCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS 473
           LCVIC+ RRR  AFIPCGH+VCC RCA +VER+  PKCPVC Q IR S+R+Y S
Sbjct: 361 LCVICVSRRRVPAFIPCGHVVCCRRCASTVERELNPKCPVCLQSIRGSMRVYYS 383

[Close]

BLAST of Cp4.1LG17g04610 vs. ExPASy Swiss-Prot
Match: Q94HV7 (E3 ubiquitin-protein ligase SPL1 OS=Arabidopsis thaliana OX=3702 GN=SPL1 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 4.6e-08
Identity = 55/231 (23.81%), Postives = 106/231 (45.89%), Query Frame = 0


Query: 248 VNMDGSRHRLPLTTVYRQLQPVCATPYTFLQALFGHEYP---VGVLDEEKILPLGRNISV 307
           VN+D S+  L L           A P + +Q   G+      +GV   E+++P+G  ++V
Sbjct: 120 VNVDVSQGELGLALTVGSDVFEKAEPVSLVQGALGYLKGFKILGVRHVERVVPIGTPLTV 179

Query: 308 VGVCSFKNGVPEIKSCK--DFPHFLCEMTKDQMVL---DLVFKTKFLFWSSIVLGSLNWN 367
           VG  + ++G+  ++  K    P ++  +  DQ++    DL  + K+      VLG +  +
Sbjct: 180 VGE-AVRDGMGNVRIQKPEQGPFYVTYIPLDQLISKLGDLSRRFKYASMGLTVLGVILIS 239

Query: 368 RWKQWRQQRRLQDSGNDSTISQLDSSNNDPIYGDFGTASDDEAASIPDDELSSNVPDGQL 427
           +       +R++D+        L+             A+   A  +     S +     L
Sbjct: 240 KPVIEYILKRIEDT--------LERRRRQFALKRVVDAAARRAKPVTGGGTSRDGDTPDL 299

Query: 428 CVICLMRRRRSAFIPCGHLVCCERCAISVERDSAPKCPVCRQQIRSSVRIY 471
           CV+CL ++  +AF+ CGH+ CC  C++ +       CP+CR++I+  ++IY
Sbjct: 300 CVVCLDQKYNTAFVECGHMCCCTPCSLQLR-----TCPLCRERIQQVLKIY 336

[Close]

BLAST of Cp4.1LG17g04610 vs. ExPASy Swiss-Prot
Match: O08863 (Baculoviral IAP repeat-containing protein 3 OS=Mus musculus OX=10090 GN=Birc3 PE=1 SV=2)

HSP 1 Score: 58.9 bits (141), Expect = 1.8e-07
Identity = 28/78 (35.90%), Postives = 45/78 (57.69%), Query Frame = 0


Query: 393 DFGTASDDEAASIPDDELSSNVPDGQLCVICLMRRRRSAFIPCGHLVCCERCAISVERDS 452
           D  +   D+ A++P +E    + + ++C +C+ R     FIPCGHLV C+ CA S+    
Sbjct: 526 DIRSLPTDDIAALPMEEQLRKLQEERMCKVCMDREVSIVFIPCGHLVVCKDCAPSLR--- 585

Query: 453 APKCPVCRQQIRSSVRIY 471
             KCP+CR  I+ +VR +
Sbjct: 586 --KCPICRGTIKGTVRTF 598

[Close]

BLAST of Cp4.1LG17g04610 vs. ExPASy Swiss-Prot
Match: Q24306 (Death-associated inhibitor of apoptosis 1 OS=Drosophila melanogaster OX=7227 GN=Diap1 PE=1 SV=2)

HSP 1 Score: 58.5 bits (140), Expect = 2.3e-07
Identity = 26/62 (41.94%), Postives = 39/62 (62.90%), Query Frame = 0


Query: 411 SSNVPDGQLCVICLMRRRRSAFIPCGHLVCCERCAISVERDSAPKCPVCRQQIRSSVRIY 470
           S+++P+ +LC IC      +AF+PCGH+V C +CA SV      KCP+CR+     +R+Y
Sbjct: 382 STSIPEEKLCKICYGAEYNTAFLPCGHVVACAKCASSV-----TKCPLCRKPFTDVMRVY 438

Query: 471 DS 473
            S
Sbjct: 442 FS 438

[Close]

BLAST of Cp4.1LG17g04610 vs. ExPASy Swiss-Prot
Match: P41436 (Apoptosis inhibitor IAP OS=Cydia pomonella granulosis virus (isolate Mexico/1963) OX=654905 GN=IAP PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 2.3e-07
Identity = 26/64 (40.62%), Postives = 39/64 (60.94%), Query Frame = 0


Query: 409 ELSSNVPDGQLCVICLMRRRRSAFIPCGHLVCCERCAISVERDSAPKCPVCRQQIRSSVR 468
           E    V D +LC IC +      F+PCGH+V C +CA+SV+     KCP+CR+ + S ++
Sbjct: 217 EKEPQVEDSKLCKICYVEECIVCFVPCGHVVACAKCALSVD-----KCPMCRKIVTSVLK 275

Query: 469 IYDS 473
           +Y S
Sbjct: 277 VYFS 275

[Close]

BLAST of Cp4.1LG17g04610 vs. NCBI nr
Match: KAG6593550.1 (E3 ubiquitin-protein ligase SPL2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 852 bits (2201), Expect = 7.41e-310
Identity = 433/455 (95.16%), Postives = 436/455 (95.82%), Query Frame = 0


Query: 29  FSSELACVISRHLPANRRRTDSAVVSVAIYNAFKEGTVFTATETRNSLMSSSEQALVSLL 88
           FSSELACVISRHLPANRR TDSAVV VAIYNAFKEGTVFTATETRNSLMSSSEQALVSL 
Sbjct: 42  FSSELACVISRHLPANRRCTDSAVVPVAIYNAFKEGTVFTATETRNSLMSSSEQALVSLF 101

Query: 89  SRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDLRHMISDGDSRQS 148
           SRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDLRHMISDGDS QS
Sbjct: 102 SRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDLRHMISDGDSGQS 161

Query: 149 ESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQMCIFNEWKGFLGW 208
           ESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQMCIFNEWKGFLGW
Sbjct: 162 ESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQMCIFNEWKGFLGW 221

Query: 209 TSDLRAIFGRTFRKQESTSFRTVPFVLVEGHSPYSDFVVVNMDGSRHRLPLTTVYRQLQP 268
           TSDLRAIFGRTFRKQESTSFRTVPFVLVEGHSPYSDFVVVNMDGSRHRLPLTTVYRQLQP
Sbjct: 222 TSDLRAIFGRTFRKQESTSFRTVPFVLVEGHSPYSDFVVVNMDGSRHRLPLTTVYRQLQP 281

Query: 269 VCATPYTFLQALFGHEYPVGVLDEEKILPLGRNISVVGVCSFKNGVPEIKSCKDFPHFLC 328
           +CATPYTFLQALFGHEYPVGVLDEEKIL LG+NISVVGVCSFKNGVPEIKSCKDFPHFLC
Sbjct: 282 ICATPYTFLQALFGHEYPVGVLDEEKILSLGKNISVVGVCSFKNGVPEIKSCKDFPHFLC 341

Query: 329 EMTKDQMVLDLVFKTKFLFWSSIVLGSL-----------NWNRWKQWRQQRRLQDSGNDS 388
           EMTKDQMVLDLVFKTKFLFWSSIVLGSL           NWNRWKQWRQQRRLQDSGNDS
Sbjct: 342 EMTKDQMVLDLVFKTKFLFWSSIVLGSLSVGVLGCSVMRNWNRWKQWRQQRRLQDSGNDS 401

Query: 389 TISQLDSSNNDPIYGDFGTASDDEAASIPDDELSSNVPDGQLCVICLMRRRRSAFIPCGH 448
           T+SQLDSSNN PIYGDFGTASDDE ASIPDDELSSNVPDGQLCVICLMRRRRSAFIPCGH
Sbjct: 402 TMSQLDSSNNIPIYGDFGTASDDEVASIPDDELSSNVPDGQLCVICLMRRRRSAFIPCGH 461

Query: 449 LVCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS 472
            VCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS
Sbjct: 462 FVCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS 496

[Close]

BLAST of Cp4.1LG17g04610 vs. NCBI nr
Match: XP_023514152.1 (E3 ubiquitin-protein ligase SPL2-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 783 bits (2023), Expect = 3.37e-284
Identity = 396/407 (97.30%), Postives = 396/407 (97.30%), Query Frame = 0


Query: 77  MSSSEQALVSLLSRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL 136
           MSSSEQALVSLLSRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL
Sbjct: 1   MSSSEQALVSLLSRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL 60

Query: 137 RHMISDGDSRQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM 196
           RHMISDGDSRQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM
Sbjct: 61  RHMISDGDSRQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM 120

Query: 197 CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLVEGHSPYSDFVVVNMDGSRHR 256
           CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLVEGHSPYSDFVVVNMDGSRHR
Sbjct: 121 CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLVEGHSPYSDFVVVNMDGSRHR 180

Query: 257 LPLTTVYRQLQPVCATPYTFLQALFGHEYPVGVLDEEKILPLGRNISVVGVCSFKNGVPE 316
           LPLTTVYRQLQPVCATPYTFLQALFGHEYPVGVLDEEKILPLGRNISVVGVCSFKNGVPE
Sbjct: 181 LPLTTVYRQLQPVCATPYTFLQALFGHEYPVGVLDEEKILPLGRNISVVGVCSFKNGVPE 240

Query: 317 IKSCKDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSL-----------NWNRWKQWR 376
           IKSCKDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSL           NWNRWKQWR
Sbjct: 241 IKSCKDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSLSVGVLGCSVMRNWNRWKQWR 300

Query: 377 QQRRLQDSGNDSTISQLDSSNNDPIYGDFGTASDDEAASIPDDELSSNVPDGQLCVICLM 436
           QQRRLQDSGNDSTISQLDSSNNDPIYGDFGTASDDEAASIPDDELSSNVPDGQLCVICLM
Sbjct: 301 QQRRLQDSGNDSTISQLDSSNNDPIYGDFGTASDDEAASIPDDELSSNVPDGQLCVICLM 360

Query: 437 RRRRSAFIPCGHLVCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS 472
           RRRRSAFIPCGHLVCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS
Sbjct: 361 RRRRSAFIPCGHLVCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS 407

[Close]

BLAST of Cp4.1LG17g04610 vs. NCBI nr
Match: XP_022964220.1 (E3 ubiquitin-protein ligase SPL2-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 774 bits (1999), Expect = 1.53e-280
Identity = 391/407 (96.07%), Postives = 392/407 (96.31%), Query Frame = 0


Query: 77  MSSSEQALVSLLSRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL 136
           MSSSEQALVSL SRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL
Sbjct: 1   MSSSEQALVSLFSRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL 60

Query: 137 RHMISDGDSRQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM 196
           RHMISDGDSRQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM
Sbjct: 61  RHMISDGDSRQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM 120

Query: 197 CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLVEGHSPYSDFVVVNMDGSRHR 256
           CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLVEGHSPYSDF VVNMDGSRHR
Sbjct: 121 CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLVEGHSPYSDFAVVNMDGSRHR 180

Query: 257 LPLTTVYRQLQPVCATPYTFLQALFGHEYPVGVLDEEKILPLGRNISVVGVCSFKNGVPE 316
           LPLTTVYRQLQPVCATPYTFLQALFGHEYPVGVLDEEKILPLGRNISVVGVCSFKNGVPE
Sbjct: 181 LPLTTVYRQLQPVCATPYTFLQALFGHEYPVGVLDEEKILPLGRNISVVGVCSFKNGVPE 240

Query: 317 IKSCKDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSL-----------NWNRWKQWR 376
           IKSCKDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSL           NWNRWKQWR
Sbjct: 241 IKSCKDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSLSVGVLGCSVMRNWNRWKQWR 300

Query: 377 QQRRLQDSGNDSTISQLDSSNNDPIYGDFGTASDDEAASIPDDELSSNVPDGQLCVICLM 436
           QQRRLQDSGNDST+SQLDSSNN PIYGDFGTASDDE ASIPDDELSSNVPDGQLCVICLM
Sbjct: 301 QQRRLQDSGNDSTMSQLDSSNNIPIYGDFGTASDDEVASIPDDELSSNVPDGQLCVICLM 360

Query: 437 RRRRSAFIPCGHLVCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS 472
           RRRRSAFIPCGHLVCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS
Sbjct: 361 RRRRSAFIPCGHLVCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS 407

[Close]

BLAST of Cp4.1LG17g04610 vs. NCBI nr
Match: XP_023000260.1 (E3 ubiquitin-protein ligase SPL2-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 769 bits (1987), Expect = 1.03e-278
Identity = 389/407 (95.58%), Postives = 391/407 (96.07%), Query Frame = 0


Query: 77  MSSSEQALVSLLSRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL 136
           MSSSEQALVSL SRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL
Sbjct: 1   MSSSEQALVSLFSRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL 60

Query: 137 RHMISDGDSRQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM 196
           RHM SDGDS QSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM
Sbjct: 61  RHMTSDGDSGQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM 120

Query: 197 CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLVEGHSPYSDFVVVNMDGSRHR 256
           CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLVEGHSPYSDFVVVNMDGSRHR
Sbjct: 121 CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLVEGHSPYSDFVVVNMDGSRHR 180

Query: 257 LPLTTVYRQLQPVCATPYTFLQALFGHEYPVGVLDEEKILPLGRNISVVGVCSFKNGVPE 316
           LPLTTVYRQLQPVCATPYTFLQALFGH+YPVGVLDEEKILPLG+NISVVGVCSFKNGVPE
Sbjct: 181 LPLTTVYRQLQPVCATPYTFLQALFGHKYPVGVLDEEKILPLGKNISVVGVCSFKNGVPE 240

Query: 317 IKSCKDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSL-----------NWNRWKQWR 376
           IKSCKDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSL           NWNRWKQWR
Sbjct: 241 IKSCKDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSLSVGVLGCSVMRNWNRWKQWR 300

Query: 377 QQRRLQDSGNDSTISQLDSSNNDPIYGDFGTASDDEAASIPDDELSSNVPDGQLCVICLM 436
           QQRRLQDSGNDSTISQLDSSNN PIYGDFGTASDDE ASIPDDELSSNVPDGQLCVICLM
Sbjct: 301 QQRRLQDSGNDSTISQLDSSNNIPIYGDFGTASDDEVASIPDDELSSNVPDGQLCVICLM 360

Query: 437 RRRRSAFIPCGHLVCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS 472
           RRRRSAFIPCGHLVCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS
Sbjct: 361 RRRRSAFIPCGHLVCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS 407

[Close]

BLAST of Cp4.1LG17g04610 vs. NCBI nr
Match: KAG7025892.1 (E3 ubiquitin-protein ligase SPL2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 764 bits (1974), Expect = 9.81e-277
Identity = 387/407 (95.09%), Postives = 390/407 (95.82%), Query Frame = 0


Query: 77  MSSSEQALVSLLSRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL 136
           MSSSEQALVSLLSRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL
Sbjct: 1   MSSSEQALVSLLSRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL 60

Query: 137 RHMISDGDSRQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM 196
           RHMISDGDS QSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM
Sbjct: 61  RHMISDGDSGQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM 120

Query: 197 CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLVEGHSPYSDFVVVNMDGSRHR 256
           CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLVEGHSPYSDFVVVNMDGSRHR
Sbjct: 121 CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLVEGHSPYSDFVVVNMDGSRHR 180

Query: 257 LPLTTVYRQLQPVCATPYTFLQALFGHEYPVGVLDEEKILPLGRNISVVGVCSFKNGVPE 316
           LPLTTVYRQLQP+CATPYTFLQALFGHEYPVGVLDEEKIL LG+NISVVGVCSFKNGVPE
Sbjct: 181 LPLTTVYRQLQPICATPYTFLQALFGHEYPVGVLDEEKILSLGKNISVVGVCSFKNGVPE 240

Query: 317 IKSCKDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSL-----------NWNRWKQWR 376
           IKS KDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSL           NWNRWKQWR
Sbjct: 241 IKSSKDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSLSVGVLGCSVMRNWNRWKQWR 300

Query: 377 QQRRLQDSGNDSTISQLDSSNNDPIYGDFGTASDDEAASIPDDELSSNVPDGQLCVICLM 436
           QQRRLQDSGNDST+SQLDSSNN PIYGDFGTASDDE ASIPDDELSSNVPDGQLCVICLM
Sbjct: 301 QQRRLQDSGNDSTMSQLDSSNNIPIYGDFGTASDDEVASIPDDELSSNVPDGQLCVICLM 360

Query: 437 RRRRSAFIPCGHLVCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS 472
           RRRRSAFIPCGH VCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS
Sbjct: 361 RRRRSAFIPCGHFVCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS 407

[Close]

BLAST of Cp4.1LG17g04610 vs. ExPASy TrEMBL
Match: A0A6J1HK84 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111464304 PE=4 SV=1)

HSP 1 Score: 774 bits (1999), Expect = 7.38e-281
Identity = 391/407 (96.07%), Postives = 392/407 (96.31%), Query Frame = 0


Query: 77  MSSSEQALVSLLSRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL 136
           MSSSEQALVSL SRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL
Sbjct: 1   MSSSEQALVSLFSRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL 60

Query: 137 RHMISDGDSRQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM 196
           RHMISDGDSRQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM
Sbjct: 61  RHMISDGDSRQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM 120

Query: 197 CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLVEGHSPYSDFVVVNMDGSRHR 256
           CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLVEGHSPYSDF VVNMDGSRHR
Sbjct: 121 CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLVEGHSPYSDFAVVNMDGSRHR 180

Query: 257 LPLTTVYRQLQPVCATPYTFLQALFGHEYPVGVLDEEKILPLGRNISVVGVCSFKNGVPE 316
           LPLTTVYRQLQPVCATPYTFLQALFGHEYPVGVLDEEKILPLGRNISVVGVCSFKNGVPE
Sbjct: 181 LPLTTVYRQLQPVCATPYTFLQALFGHEYPVGVLDEEKILPLGRNISVVGVCSFKNGVPE 240

Query: 317 IKSCKDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSL-----------NWNRWKQWR 376
           IKSCKDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSL           NWNRWKQWR
Sbjct: 241 IKSCKDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSLSVGVLGCSVMRNWNRWKQWR 300

Query: 377 QQRRLQDSGNDSTISQLDSSNNDPIYGDFGTASDDEAASIPDDELSSNVPDGQLCVICLM 436
           QQRRLQDSGNDST+SQLDSSNN PIYGDFGTASDDE ASIPDDELSSNVPDGQLCVICLM
Sbjct: 301 QQRRLQDSGNDSTMSQLDSSNNIPIYGDFGTASDDEVASIPDDELSSNVPDGQLCVICLM 360

Query: 437 RRRRSAFIPCGHLVCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS 472
           RRRRSAFIPCGHLVCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS
Sbjct: 361 RRRRSAFIPCGHLVCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS 407

[Close]

BLAST of Cp4.1LG17g04610 vs. ExPASy TrEMBL
Match: A0A6J1KHU7 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111494539 PE=4 SV=1)

HSP 1 Score: 769 bits (1987), Expect = 4.97e-279
Identity = 389/407 (95.58%), Postives = 391/407 (96.07%), Query Frame = 0


Query: 77  MSSSEQALVSLLSRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL 136
           MSSSEQALVSL SRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL
Sbjct: 1   MSSSEQALVSLFSRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL 60

Query: 137 RHMISDGDSRQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM 196
           RHM SDGDS QSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM
Sbjct: 61  RHMTSDGDSGQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM 120

Query: 197 CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLVEGHSPYSDFVVVNMDGSRHR 256
           CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLVEGHSPYSDFVVVNMDGSRHR
Sbjct: 121 CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLVEGHSPYSDFVVVNMDGSRHR 180

Query: 257 LPLTTVYRQLQPVCATPYTFLQALFGHEYPVGVLDEEKILPLGRNISVVGVCSFKNGVPE 316
           LPLTTVYRQLQPVCATPYTFLQALFGH+YPVGVLDEEKILPLG+NISVVGVCSFKNGVPE
Sbjct: 181 LPLTTVYRQLQPVCATPYTFLQALFGHKYPVGVLDEEKILPLGKNISVVGVCSFKNGVPE 240

Query: 317 IKSCKDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSL-----------NWNRWKQWR 376
           IKSCKDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSL           NWNRWKQWR
Sbjct: 241 IKSCKDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSLSVGVLGCSVMRNWNRWKQWR 300

Query: 377 QQRRLQDSGNDSTISQLDSSNNDPIYGDFGTASDDEAASIPDDELSSNVPDGQLCVICLM 436
           QQRRLQDSGNDSTISQLDSSNN PIYGDFGTASDDE ASIPDDELSSNVPDGQLCVICLM
Sbjct: 301 QQRRLQDSGNDSTISQLDSSNNIPIYGDFGTASDDEVASIPDDELSSNVPDGQLCVICLM 360

Query: 437 RRRRSAFIPCGHLVCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS 472
           RRRRSAFIPCGHLVCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS
Sbjct: 361 RRRRSAFIPCGHLVCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS 407

[Close]

BLAST of Cp4.1LG17g04610 vs. ExPASy TrEMBL
Match: A0A6J1HH89 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111464304 PE=4 SV=1)

HSP 1 Score: 751 bits (1939), Expect = 6.38e-271
Identity = 391/456 (85.75%), Postives = 392/456 (85.96%), Query Frame = 0


Query: 77  MSSSEQALVSLLSRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL 136
           MSSSEQALVSL SRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL
Sbjct: 1   MSSSEQALVSLFSRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL 60

Query: 137 RHMISDGDSRQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM 196
           RHMISDGDSRQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM
Sbjct: 61  RHMISDGDSRQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM 120

Query: 197 CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTV------------------------- 256
           CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTV                         
Sbjct: 121 CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVKFSFSLLLLWSFSCDSYWIFFFPLL 180

Query: 257 ------------------------PFVLVEGHSPYSDFVVVNMDGSRHRLPLTTVYRQLQ 316
                                   PFVLVEGHSPYSDF VVNMDGSRHRLPLTTVYRQLQ
Sbjct: 181 VARASRFVSAISSERGPNRVGLKVPFVLVEGHSPYSDFAVVNMDGSRHRLPLTTVYRQLQ 240

Query: 317 PVCATPYTFLQALFGHEYPVGVLDEEKILPLGRNISVVGVCSFKNGVPEIKSCKDFPHFL 376
           PVCATPYTFLQALFGHEYPVGVLDEEKILPLGRNISVVGVCSFKNGVPEIKSCKDFPHFL
Sbjct: 241 PVCATPYTFLQALFGHEYPVGVLDEEKILPLGRNISVVGVCSFKNGVPEIKSCKDFPHFL 300

Query: 377 CEMTKDQMVLDLVFKTKFLFWSSIVLGSL-----------NWNRWKQWRQQRRLQDSGND 436
           CEMTKDQMVLDLVFKTKFLFWSSIVLGSL           NWNRWKQWRQQRRLQDSGND
Sbjct: 301 CEMTKDQMVLDLVFKTKFLFWSSIVLGSLSVGVLGCSVMRNWNRWKQWRQQRRLQDSGND 360

Query: 437 STISQLDSSNNDPIYGDFGTASDDEAASIPDDELSSNVPDGQLCVICLMRRRRSAFIPCG 472
           ST+SQLDSSNN PIYGDFGTASDDE ASIPDDELSSNVPDGQLCVICLMRRRRSAFIPCG
Sbjct: 361 STMSQLDSSNNIPIYGDFGTASDDEVASIPDDELSSNVPDGQLCVICLMRRRRSAFIPCG 420

[Close]

BLAST of Cp4.1LG17g04610 vs. ExPASy TrEMBL
Match: A0A6J1KJE8 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111494539 PE=4 SV=1)

HSP 1 Score: 746 bits (1927), Expect = 4.29e-269
Identity = 389/456 (85.31%), Postives = 391/456 (85.75%), Query Frame = 0


Query: 77  MSSSEQALVSLLSRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL 136
           MSSSEQALVSL SRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL
Sbjct: 1   MSSSEQALVSLFSRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL 60

Query: 137 RHMISDGDSRQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM 196
           RHM SDGDS QSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM
Sbjct: 61  RHMTSDGDSGQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM 120

Query: 197 CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTV------------------------- 256
           CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTV                         
Sbjct: 121 CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVKSSFSLLLLWSFSCDSLLDLLFPLL 180

Query: 257 ------------------------PFVLVEGHSPYSDFVVVNMDGSRHRLPLTTVYRQLQ 316
                                   PFVLVEGHSPYSDFVVVNMDGSRHRLPLTTVYRQLQ
Sbjct: 181 VARASRFVSAISSERGPNRVGLKVPFVLVEGHSPYSDFVVVNMDGSRHRLPLTTVYRQLQ 240

Query: 317 PVCATPYTFLQALFGHEYPVGVLDEEKILPLGRNISVVGVCSFKNGVPEIKSCKDFPHFL 376
           PVCATPYTFLQALFGH+YPVGVLDEEKILPLG+NISVVGVCSFKNGVPEIKSCKDFPHFL
Sbjct: 241 PVCATPYTFLQALFGHKYPVGVLDEEKILPLGKNISVVGVCSFKNGVPEIKSCKDFPHFL 300

Query: 377 CEMTKDQMVLDLVFKTKFLFWSSIVLGSL-----------NWNRWKQWRQQRRLQDSGND 436
           CEMTKDQMVLDLVFKTKFLFWSSIVLGSL           NWNRWKQWRQQRRLQDSGND
Sbjct: 301 CEMTKDQMVLDLVFKTKFLFWSSIVLGSLSVGVLGCSVMRNWNRWKQWRQQRRLQDSGND 360

Query: 437 STISQLDSSNNDPIYGDFGTASDDEAASIPDDELSSNVPDGQLCVICLMRRRRSAFIPCG 472
           STISQLDSSNN PIYGDFGTASDDE ASIPDDELSSNVPDGQLCVICLMRRRRSAFIPCG
Sbjct: 361 STISQLDSSNNIPIYGDFGTASDDEVASIPDDELSSNVPDGQLCVICLMRRRRSAFIPCG 420

[Close]

BLAST of Cp4.1LG17g04610 vs. ExPASy TrEMBL
Match: A0A6J1JT39 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111488642 PE=4 SV=1)

HSP 1 Score: 713 bits (1841), Expect = 8.54e-257
Identity = 363/408 (88.97%), Postives = 377/408 (92.40%), Query Frame = 0


Query: 77  MSSSEQALVSLLSRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL 136
           MSSSEQALVSLLS+FALSFDGA LGAALAYAA RTVLKLTASCSALDELRKAP V VSDL
Sbjct: 1   MSSSEQALVSLLSQFALSFDGAVLGAALAYAAVRTVLKLTASCSALDELRKAPYVSVSDL 60

Query: 137 RHMISDGDSRQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVIIQRTQM 196
           RH+ISDGDS +SESD KLVVVRGTVEARS VEGNWKS+QPNVLISQESGDRAVIIQRTQM
Sbjct: 61  RHIISDGDSGKSESDHKLVVVRGTVEARSSVEGNWKSVQPNVLISQESGDRAVIIQRTQM 120

Query: 197 CIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLV-EGHSPYSDFVVVNMDGSRH 256
           CIFNEWKGF GWTSDLRAIFGRTFRKQESTSFRTVPFVLV EGHSPYSDFVVVNMDGSRH
Sbjct: 121 CIFNEWKGFFGWTSDLRAIFGRTFRKQESTSFRTVPFVLVDEGHSPYSDFVVVNMDGSRH 180

Query: 257 RLPLTTVYRQLQPVCATPYTFLQALFGHEYPVGVLDEEKILPLGRNISVVGVCSFKNGVP 316
            LPLTTVY QLQPV ATPYTFLQALFGHEYPVGVLDEEKILPLG+NIS VG+CSFKNGVP
Sbjct: 181 PLPLTTVYHQLQPVSATPYTFLQALFGHEYPVGVLDEEKILPLGKNISAVGICSFKNGVP 240

Query: 317 EIKSCKDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSL-----------NWNRWKQW 376
            IKSCKDFPHFLCEMTKDQM+LDLVFKTKFLFWSS+VLGSL           NWNRWKQW
Sbjct: 241 VIKSCKDFPHFLCEMTKDQMILDLVFKTKFLFWSSVVLGSLSVGVLGYSVVRNWNRWKQW 300

Query: 377 RQQRRLQDSGNDSTISQLDSSNNDPIYGDFGTASDDEAASIPDDELSSNVPDGQLCVICL 436
           RQQRRLQDSGNDST+SQLDS NN PIYGDFGTASD+E A  P+DE+SSNVPDGQLCVICL
Sbjct: 301 RQQRRLQDSGNDSTMSQLDS-NNIPIYGDFGTASDNEEAVDPEDEVSSNVPDGQLCVICL 360

Query: 437 MRRRRSAFIPCGHLVCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS 472
           MRR+RSAFIPCGH VCCERCA+SVERDSAPKCPVCRQQIRSSVRIYDS
Sbjct: 361 MRRKRSAFIPCGHFVCCERCAMSVERDSAPKCPVCRQQIRSSVRIYDS 407

[Close]

BLAST of Cp4.1LG17g04610 vs. TAIR 10
Match: AT1G54150.1 (E3 Ubiquitin ligase family protein )

HSP 1 Score: 343.2 bits (879), Expect = 3.3e-94
Identity = 195/414 (47.10%), Postives = 264/414 (63.77%), Query Frame = 0


Query: 77  MSSSEQALVSLLSRFALSFDGAALGAALAYAAFRTVLKLTASCSALDELRKAPNVRVSDL 136
           MSS E+AL++LL+  ALSFDGA LG  LA +A  + LK  ++ +AL +++ AP V +SDL
Sbjct: 1   MSSPERALLNLLTDIALSFDGAILGLTLAVSAVGSALKYASTNAALKKIKDAPEVSISDL 60

Query: 137 RHMI------SDGDSRQSESDQKLVVVRGTVEARSFVEGNWKSLQPNVLISQESGDRAVI 196
           R ++      S+ +  +  +DQ++VVVRG V+ +  + G+      NVLIS E+GD+A+I
Sbjct: 61  RSLLPASEDKSETNDNRKSNDQRIVVVRGVVKPK--ISGDEGYKNNNVLISPETGDKALI 120

Query: 197 IQRTQMCIFNEWKGFLGWTSDLRAIFGRTFRKQESTSFRTVPFVLV-EGHSPYSDFVVVN 256
           IQRTQ  +++ WK     T   R +  R+ RK  +   RTVPFV+V +     S FV VN
Sbjct: 121 IQRTQTYVYSGWKRLFQSTGH-RFMLERSLRKHGADFTRTVPFVIVGKDQQSNSSFVAVN 180

Query: 257 MDGSRHRLPLTTVYRQLQPVCATPYTFLQALFGHEYPVGVLDEEKILPLGRNISVVGVCS 316
           MDGSR  LPLTTVY +LQP+ +   +FLQA    +YPVG+LD EKILP G++I+ VG+ S
Sbjct: 181 MDGSRQPLPLTTVYNRLQPINS---SFLQAFLYPDYPVGLLDIEKILPPGKDITAVGIYS 240

Query: 317 FKNGVPEIKSCKDFPHFLCEMTKDQMVLDLVFKTKFLFWSSIVLGSLN-----------W 376
           F NGVPEIKSC+D P+FL EMTKD+M+ DL+ +T F+F  S++LG ++           W
Sbjct: 241 FNNGVPEIKSCQDLPYFLSEMTKDKMIEDLMEQTNFIFLGSVILGIVSVGILSYAAVRTW 300

Query: 377 NRWKQWRQQRRLQDSGNDSTISQLDSSNNDPIYGDFGTASDDEAASIPDDELSSNVPDGQ 436
           N+WKQW  QR L    NDS +                   DDE    P+D  +  +PDG+
Sbjct: 301 NKWKQWNHQRELPQRPNDSVV-------------------DDE----PED--ADEIPDGE 360

Query: 437 LCVICLMRRRRSAFIPCGHLVCCERCAISVERDSAPKCPVCRQQIRSSVRIYDS 473
           LCVIC+ RRR  AFIPCGH+VCC RCA +VER+  PKCPVC Q IR S+R+Y S
Sbjct: 361 LCVICVSRRRVPAFIPCGHVVCCRRCASTVERELNPKCPVCLQSIRGSMRVYYS 383

[Close]

BLAST of Cp4.1LG17g04610 vs. TAIR 10
Match: AT1G59560.1 (E3 Ubiquitin ligase family protein )

HSP 1 Score: 60.8 bits (146), Expect = 3.3e-09
Identity = 55/231 (23.81%), Postives = 106/231 (45.89%), Query Frame = 0


Query: 248 VNMDGSRHRLPLTTVYRQLQPVCATPYTFLQALFGHEYP---VGVLDEEKILPLGRNISV 307
           VN+D S+  L L           A P + +Q   G+      +GV   E+++P+G  ++V
Sbjct: 120 VNVDVSQGELGLALTVGSDVFEKAEPVSLVQGALGYLKGFKILGVRHVERVVPIGTPLTV 179

Query: 308 VGVCSFKNGVPEIKSCK--DFPHFLCEMTKDQMVL---DLVFKTKFLFWSSIVLGSLNWN 367
           VG  + ++G+  ++  K    P ++  +  DQ++    DL  + K+      VLG +  +
Sbjct: 180 VGE-AVRDGMGNVRIQKPEQGPFYVTYIPLDQLISKLGDLSRRFKYASMGLTVLGVILIS 239

Query: 368 RWKQWRQQRRLQDSGNDSTISQLDSSNNDPIYGDFGTASDDEAASIPDDELSSNVPDGQL 427
           +       +R++D+        L+             A+   A  +     S +     L
Sbjct: 240 KPVIEYILKRIEDT--------LERRRRQFALKRVVDAAARRAKPVTGGGTSRDGDTPDL 299

Query: 428 CVICLMRRRRSAFIPCGHLVCCERCAISVERDSAPKCPVCRQQIRSSVRIY 471
           CV+CL ++  +AF+ CGH+ CC  C++ +       CP+CR++I+  ++IY
Sbjct: 300 CVVCLDQKYNTAFVECGHMCCCTPCSLQLR-----TCPLCRERIQQVLKIY 336

[Close]

BLAST of Cp4.1LG17g04610 vs. TAIR 10
Match: AT4G24204.1 (RING/U-box superfamily protein )

HSP 1 Score: 56.6 bits (135), Expect = 6.2e-08
Identity = 29/71 (40.85%), Postives = 37/71 (52.11%), Query Frame = 0


Query: 399 DDEAASIPDDELSSNVPDGQLCVICLMRRRRSAFIPCGHLVCCERCAISVERDSAPKCPV 458
           D E AS      S +V    LCVIC   RR   F+PCGH   C  CA  +  + +  CP+
Sbjct: 51  DVETASFSS---SDDVDYSTLCVICFEERRNCFFVPCGHSATCRGCAQRILSEESKVCPI 110

Query: 459 CRQQIRSSVRI 470
           CR+ IR S R+
Sbjct: 111 CRRVIRKSKRL 118

[Close]

BLAST of Cp4.1LG17g04610 vs. TAIR 10
Match: AT4G24204.2 (RING/U-box superfamily protein )

HSP 1 Score: 56.6 bits (135), Expect = 6.2e-08
Identity = 29/71 (40.85%), Postives = 37/71 (52.11%), Query Frame = 0


Query: 399 DDEAASIPDDELSSNVPDGQLCVICLMRRRRSAFIPCGHLVCCERCAISVERDSAPKCPV 458
           D E AS      S +V    LCVIC   RR   F+PCGH   C  CA  +  + +  CP+
Sbjct: 85  DVETASFSS---SDDVDYSTLCVICFEERRNCFFVPCGHSATCRGCAQRILSEESKVCPI 144

Query: 459 CRQQIRSSVRI 470
           CR+ IR S R+
Sbjct: 145 CRRVIRKSKRL 152

[Close]

BLAST of Cp4.1LG17g04610 vs. TAIR 10
Match: AT4G24204.3 (RING/U-box superfamily protein )

HSP 1 Score: 56.6 bits (135), Expect = 6.2e-08
Identity = 29/71 (40.85%), Postives = 37/71 (52.11%), Query Frame = 0


Query: 399 DDEAASIPDDELSSNVPDGQLCVICLMRRRRSAFIPCGHLVCCERCAISVERDSAPKCPV 458
           D E AS      S +V    LCVIC   RR   F+PCGH   C  CA  +  + +  CP+
Sbjct: 106 DVETASFSS---SDDVDYSTLCVICFEERRNCFFVPCGHSATCRGCAQRILSEESKVCPI 165

Query: 459 CRQQIRSSVRI 470
           CR+ IR S R+
Sbjct: 166 CRRVIRKSKRL 173

The following BLAST results are available for this feature:

BLAST of Cp4.1LG17g04610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SYH3	4.7e-93	47.10	E3 ubiquitin-protein ligase SPL2 OS=Arabidopsis thaliana OX=3702 GN=SPL2 PE=2 SV...	[more]
Q94HV7	4.6e-08	23.81	E3 ubiquitin-protein ligase SPL1 OS=Arabidopsis thaliana OX=3702 GN=SPL1 PE=2 SV...	[more]
O08863	1.8e-07	35.90	Baculoviral IAP repeat-containing protein 3 OS=Mus musculus OX=10090 GN=Birc3 PE...	[more]
Q24306	2.3e-07	41.94	Death-associated inhibitor of apoptosis 1 OS=Drosophila melanogaster OX=7227 GN=...	[more]
P41436	2.3e-07	40.63	Apoptosis inhibitor IAP OS=Cydia pomonella granulosis virus (isolate Mexico/1963...	[more]

BLAST of Cp4.1LG17g04610 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6593550.1	7.41e-310	95.16	E3 ubiquitin-protein ligase SPL2, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_023514152.1	3.37e-284	97.30	E3 ubiquitin-protein ligase SPL2-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022964220.1	1.53e-280	96.07	E3 ubiquitin-protein ligase SPL2-like isoform X2 [Cucurbita moschata]	[more]
XP_023000260.1	1.03e-278	95.58	E3 ubiquitin-protein ligase SPL2-like isoform X2 [Cucurbita maxima]	[more]
KAG7025892.1	9.81e-277	95.09	E3 ubiquitin-protein ligase SPL2 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Cp4.1LG17g04610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HK84	7.38e-281	96.07	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111464304...	[more]
A0A6J1KHU7	4.97e-279	95.58	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111494539 P...	[more]
A0A6J1HH89	6.38e-271	85.75	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111464304...	[more]
A0A6J1KJE8	4.29e-269	85.31	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111494539 P...	[more]
A0A6J1JT39	8.54e-257	88.97	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111488642 P...	[more]

BLAST of Cp4.1LG17g04610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G54150.1	3.3e-94	47.10	E3 Ubiquitin ligase family protein	[more]
AT1G59560.1	3.3e-09	23.81	E3 Ubiquitin ligase family protein	[more]
AT4G24204.1	6.2e-08	40.85	RING/U-box superfamily protein	[more]
AT4G24204.2	6.2e-08	40.85	RING/U-box superfamily protein	[more]
AT4G24204.3	6.2e-08	40.85	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 420..459 e-value: 0.003 score: 26.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 420..460 score: 10.807436
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 395..471 e-value: 4.9E-17 score: 63.1
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 418..465 e-value: 4.2E-14 score: 52.1
None	No IPR available	PANTHER	PTHR47355:SF1	E3 UBIQUITIN-PROTEIN LIGASE SPL2	coord: 77..472
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 414..466
IPR022170	E3 Ubiquitin ligase MUL1-like	PFAM	PF12483	GIDE	coord: 218..355 e-value: 7.8E-33 score: 113.2
IPR044247	E3 ubiquitin-protein ligase SPL2-like	PANTHER	PTHR47355	E3 UBIQUITIN-PROTEIN LIGASE SPL2	coord: 77..472

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG17g04610.1	Cp4.1LG17g04610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006996	organelle organization
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity