Cp4.1LG17g03900 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG17g03900
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	vesicle-associated protein 1-3-like
Location	Cp4.1LG17: 2888319 .. 2893557 (+)
RNA-Seq Expression	Cp4.1LG17g03900
Synteny	Cp4.1LG17g03900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTAAAAATAAAATGATTTAAAAAACATACAGCTATTATTGTGAGATTATGCAAAACAAGGAGCATTCAATTCCCCTCTTTCTCTGTTTTGACTCTCAAAAGTAATAACATGAAAACCAGTTCCCTGTGTAGTTACTTTCGAAATTTCTGGGGTTCTTCCTTTTGTTTTTCTCAATTTTTAGATCCATGATACTTTTCTCATTGTTTTGATTGAGTGTTTTGGTGGAATTTGATATCTGCTGGGATCAGGGTCGACGATAATGAATTCTGGGGATTATATCAATATTCAACCCTCCGAGCTCAAATTCGCATGTGAGTATAACCTTTCCACTTTTCCCCCTTCTTGTTTCTTCCCTACTTTCCACTTTGGTTCTCTCCAAAATTTTCTCAAAAGGGTCATTTCTTTCCCAACTGTTGCACTTGGAGAATTGATGAATCTTTGGTGGGAACTTTTCATTTTCCCCGATTATGCTTCCGATTTTTTGTTTCCTTTATTGCTCTATTTTTACTCTTCTTTTGTTTCTGATCATCATGGTTCCACTTGTTTGGGCTTTGAATTTGTGAAACATTAGGATGTTGACTGACGGAGGAGTGACCGTAAAGGTCCAGATGAGAGGTCAAGGGTTATCTAACTAACTTAAGAATGTTTATCTATTAAGGTTTAAGAAGTTACTTGAGGGAGTTGCGTTGTTGTTCATCACGAATTGCAAATATCAGGTTGAATTGATTGTAGGAGTTCGATTAATTTTTTGTTTCTGCTTGCTTCTTTGAAATCTGGCCCTATATTTCACTATGATATCTCGAATACTTGAAGCTTGGTAATGGTTGCCATTTCATCAAATTCTGATTTATGGATATCTGTGCCGCACTTTTATTTGTTTGTTATTGTATTTTTTTTTTTACTTCTGTAGTTTGTGAAACTTCACTTATGTGTGTTCGTTATATTATGGAAAAGTTGAATTGAAGAAGCAAAGTTCTTGTTCCTTGCAATTGACCAACAAAACGGACAAATATGTTGCCTTCAAGGTATGTCTTTTTTGTTCATTCTTGGTGTACCTTAGTTTCGTTTCATTTTGACGGGTACGAATTGACAATGTGTACATTTCTGAACTCTATCATCCTAATTTAATAGGTTAAAACCACCAATCCCAAGAAGTATTGTGTTCGTCCTAATGCTGGAATCATTTTGCCTAGTAGTGCAAGCAATATTACAGGTAAATCAGTATGTGAAAGTAGTTGATTCATTTTTCTCGTTCTATTTAAAATTATGAGTTACACCTTGATTTTTCTTCATTGTGTCTACTGGATTGGCCTATATATTTTTCATGTAGTTGGTCTCTACTTTTGAGTTATGGATATTTGATATGTTATTTGTCTTTTCAGTTACGATGCAAGGTCCAAAGGAGGCGCCTCCTGATATGCAGTGCAAGGATAAGTTCTTGATTCAAAGTGTTGTAGCACCCGATGGTACAACATCGAAGGACATTAGTGCAGAATTGGTGGGAATCTCTTGTTTATGCGTTTATTAGTTATGTAATTTTTTTTTTCTATCTATAATGATCTTACATTTTTTTGTTTATGTTTTGCATCTATGAAATTGTAGTTTAACAAGGGAGATGGTAAAGTAGTAGATGAGTTTAAGATGAGGGTTGTTTACACTTTTGCAAATCCACCATCGCCTGTTCCAGAAGGATCTGAAGAAGGATCTCCTCCCAGAACCGCTGCAGTCGATGATGGAAACCAAAATTTTGCGTTGTTTGATGCTGTAAATGTTTTCCAAGTTTCTTTTGTAGTTTTTTACTCTTGTCTTTTCTTTTCCACCCATCATTGGTGATGAAGCCGATGCTTTTGCTTATTTTATTGCAATTGTTGTTAATTAGGTTTCAAGATCTCTGGAGGATCCTAAAGAGAAGTCATCACAGGTAAGATGTTCTTCTCTTGCTTCTATATTATATAGACATCTAAGTGTTTCATCTTCTTTATGACTTTTATAAACTCTTTGCTCCCTCTTTCATTGTCTTTTCTTTCACTGCACACACTTTTCAAATTTTTTTGTAACATGAATATTTTTTCTGACTGTACAGAAAGTACTTTTCAATGTTCTAGTGTTCCATTTTAAAGTTTTTTCAATGTTGCTTGCCAGTGAAGAGCCTGTACCAAATGCATGGGAATGTGAATGAAATATGGAGGAAGACTGTTTTCTTAGGAACTACTCTATTAATTCCAGTTGAATGTAGAAAAGAAAGAACAATAAGATATCCTCCTAAAAAGTCCAATGCAAGTATAAACTATTTGCACTAGAATTAAAGAAAAAATTAGGTGACTACTAACTACAATTTTTTACCGGTAGCAGCAAAACTATATAGGTGAGAAGAGATTTGGTCCCTCAGCCTCCTCTATTTTCCCTTTCTCTGTCTTCAAAGAAAACCTTGAGTTTCTTTCTTTCTAAATATTCCAAAAGATAGGCAAAGAAACTCTTAACTTAAAAAAATTGATAGGCTTTGTGTGGCCATGTCTATCAGCAAGGTTGGAGCGGCACCAAGAGAAGTTGAAATCTTTTTTTTTTTAAAAAAAAAATTTGTAACAGTAGAGGAAAGAAGGTAGAAATTAAAGAGAGACTGGTTGTTTTCTCTGACAATTTTTAGAAACATACACCACTAAGATCTTAGACACAAATGCTTGGATTCTTTTGATTTCTAATTTATATTTAAGGCATTTACCTTTCTATGGCTAGCACAACCAGGCAAACATGTACATGTTTTTAAAGGCCTGAGGGACTTACATGTGAAAATGGGAATGATAATTCAGATGATGAAAAGTCGTTAGTCAAGAATTGAGGTATGAGGGGACCTTTTTCAACTTCTAGAATTTGTGATCCATATACTTTGGAGGAAAATAGCAACTTTAAAAGATGTAGTCACCGTTCTTTTGTCATTTGATTGTTGGGATTTTTTTCCAAGTTCGAGACATAGGAAGAGCAACCTTCCAAACAATGTAAGATTAACTTTTTAATGGTGATGGGTTTGGATGGGGCTATCAGTCATGACTTTATGATTTTTTGTTTTTTGAGAAGTGCTGTGTCACCGGAAGCTGCCCTGTCTTATTTGTTTGTGTGTTTTTTTCCTTCCCTTCTTAATTAATGCAAGGTATAGGATGGGTGTAAATTTGAATTGATTGATGGGATATTAGCTGTTATATTACACATTTGGGAGATGTACCTGGAAAGGGCTGGTCAATGTGTTTCTGGATAAGTGGATGCTGAAAACTTTTCATAGCATTTATTTTTTACTGTATTGTCTGTTGATTTTTCTACTTCATGATGAAAATATTGATGCAGATGTGGTCCGCAGTTTCTAAGTTGACCGAGGAGAAAGCTGCAGCTTTGCAACAGAATCAGAAACTACGCCAGGAACTGGTATTTCATTTAGGATTGAATGTTATTTTCTTTATCTTCAAGTTTAGCTATTCTACTTACTCTAGTGCTTTGATCTCTTTCTATGATTGTGTTTGGGAGGAGATATTGCCTGTTTGTCATGGAATAAGGAATTGTGAGTATTTTTCTTTTTACAAGATATAAGTACATATTAAAGTCAGCCCAAGATTACCATTTCAAATTGTCCACCTAAGTCCTTCAACATTAAAAGGTATAGCCGTTTGAGTCCTTGGTGTATTACTTTTCTGCCGAAAATTTCCTTTCCCAGTACAAATCTTCTACTTGCTCACATTAATGCTAATATATATATTTAAAGCTATGTTATGAATTTGTATAAAGGGAAAATAAAAGGACTAAAATGATTATTTTCTAAAGTTTAGGGGTGAAGACATTTCAAAAGTTAGGGATGAAAACAGAAAATGTGGAAGTTTAAGGACCAAAATAGGATTTAAACATAACAATTTCTATGGATTTTGTTGTTTCCATGTCCTTTTCTCTTGCATGTCTATTTACATAGATAGGGACATTTACATTTTCATAAAAGATAACTTTGTTGGCGTTCTTTTATGATGAAAGCTAGCTTTTATTCAAATAAAATCATAAAAACAAGTCAATATCTTGACATTTTTGCCTGTATCCAAGCTGACTTTTGGTTGTAACTAAAGAAAGAATTATGTTATCCCACTGTGTGATTTTTTTCCCTTTTTAGAGAATGGAAGGAAGGGATCCTATGGGGAATTCTATTCCTTTTAGTTGCAAGAAGCCAATTATCTAAGCCAAATCCCACGCCTCTTCCCTCCCTACCCTTTGGCCTTACTTTCAAGAAAATTGGGTATTATGAAAAAGTAAGATAATGAGCCCTTCAAAAAGTTCAAAGATAGATTCAATGACTATGGTTGGTTCACACTATTAATCATGCGAAGCTACCTTCACAAGTTTTTGGCTCATCACTAGTAATTTTGTGCTGATCATTTTATTACCATTAAGATTGACAATGGTAGAAATACAAGCTTTTATTATTGTTGTTTTTTCTGAGGACAGAGCCCTAAAGTTTATTTTCCCTTGATGTTACGAAAGATTACGAAACACAAGCAAGGGGATTTAGCCCGTCTCGAACTGACGTTTTGTATCTACCAATAATTTTATCATATTTCAATCTAGTTACTAGCATTGCTTTTACTTTTAGCCTCTTAACGTAGAAAGCTCGATCTATATCCATTAAGTGTAGCATCTTTATGTCCTGTATCTCTTTTTGATGAGTGTCTGGTATTGCACAAATCAGCTAATGTTCCTTTGATCTCGTCACTTGCCCAAGTTATAGTTTTTTTTAAGATATATATATATATATATATTCTTTTGGCAGGAACTTTTGAGGAAAGAATCAAGCGGAAAGCAGGGTGGCGGTTTCTCTGTATTGCTTGTGGTGCTCGTTGGTCTCATCGGAGTTCTGATCGGATACCTGTTAAAGAAAACATAGACAAATTAGGCATTCCCTGTCGTTTGCTTGCTGCACTTTGATGTTATTATCTGTGTTGTGTTTTGTCCAGAATTTAACAACCTTAATTGGTTGAATTCTTAGTGAGTCAAAACTGAAGACAGATTTGTTATGTCAATCAACATCGACTCTGGATAGTTGTTTTCAGAAGAATACTTTTTGTTGCTTGTTTGCCCTCTTAGTGTTCATCCATCTCGTTTCCATTTGGATTTTGGTTAAGTAAAAGCCATGCCTTTTCTCTCCTCCAAACAGTTCTCAAGATTTATTAAAGCATGTAGATATGAACAATGAATACAACAATGATTTGAG

mRNA sequence

TTTTTAAAAATAAAATGATTTAAAAAACATACAGCTATTATTGTGAGATTATGCAAAACAAGGAGCATTCAATTCCCCTCTTTCTCTGTTTTGACTCTCAAAAGTAATAACATGAAAACCAGTTCCCTGTGTAGTTACTTTCGAAATTTCTGGGGTTCTTCCTTTTGTTTTTCTCAATTTTTAGATCCATGATACTTTTCTCATTGTTTTGATTGAGTGTTTTGGTGGAATTTGATATCTGCTGGGATCAGGGTCGACGATAATGAATTCTGGGGATTATATCAATATTCAACCCTCCGAGCTCAAATTCGCATTTGAATTGAAGAAGCAAAGTTCTTGTTCCTTGCAATTGACCAACAAAACGGACAAATATGTTGCCTTCAAGGTTAAAACCACCAATCCCAAGAAGTATTGTGTTCGTCCTAATGCTGGAATCATTTTGCCTAGTAGTGCAAGCAATATTACAGTTACGATGCAAGGTCCAAAGGAGGCGCCTCCTGATATGCAGTGCAAGGATAAGTTCTTGATTCAAAGTGTTGTAGCACCCGATGGTACAACATCGAAGGACATTAGTGCAGAATTGTTTAACAAGGGAGATGGTAAAGTAGTAGATGAGTTTAAGATGAGGGTTGTTTACACTTTTGCAAATCCACCATCGCCTGTTCCAGAAGGATCTGAAGAAGGATCTCCTCCCAGAACCGCTGCAGTCGATGATGGAAACCAAAATTTTGCGTTGTTTGATGCTGTTTCAAGATCTCTGGAGGATCCTAAAGAGAAGTCATCACAGATGTGGTCCGCAGTTTCTAAGTTGACCGAGGAGAAAGCTGCAGCTTTGCAACAGAATCAGAAACTACGCCAGGAACTGGTATTTCATTTAGGATTGAATGTTATTTTCTTTATCTTCAAGTTTAGCTATTCTACTTACTCTAGTGCTTTGATCTCTTTCTATGATTGTGTTTGGGAGGAGATATTGCCTGTTTGTCATGGAATAAGGAATTGAACTTTTGAGGAAAGAATCAAGCGGAAAGCAGGGTGGCGGTTTCTCTGTATTGCTTGTGGTGCTCGTTGGTCTCATCGGAGTTCTGATCGGATACCTGTTAAAGAAAACATAGACAAATTAGGCATTCCCTGTCGTTTGCTTGCTGCACTTTGATGTTATTATCTGTGTTGTGTTTTGTCCAGAATTTAACAACCTTAATTGGTTGAATTCTTAGTGAGTCAAAACTGAAGACAGATTTGTTATGTCAATCAACATCGACTCTGGATAGTTGTTTTCAGAAGAATACTTTTTGTTGCTTGTTTGCCCTCTTAGTGTTCATCCATCTCGTTTCCATTTGGATTTTGGTTAAGTAAAAGCCATGCCTTTTCTCTCCTCCAAACAGTTCTCAAGATTTATTAAAGCATGTAGATATGAACAATGAATACAACAATGATTTGAG

Coding sequence (CDS)

ATGAATTCTGGGGATTATATCAATATTCAACCCTCCGAGCTCAAATTCGCATTTGAATTGAAGAAGCAAAGTTCTTGTTCCTTGCAATTGACCAACAAAACGGACAAATATGTTGCCTTCAAGGTTAAAACCACCAATCCCAAGAAGTATTGTGTTCGTCCTAATGCTGGAATCATTTTGCCTAGTAGTGCAAGCAATATTACAGTTACGATGCAAGGTCCAAAGGAGGCGCCTCCTGATATGCAGTGCAAGGATAAGTTCTTGATTCAAAGTGTTGTAGCACCCGATGGTACAACATCGAAGGACATTAGTGCAGAATTGTTTAACAAGGGAGATGGTAAAGTAGTAGATGAGTTTAAGATGAGGGTTGTTTACACTTTTGCAAATCCACCATCGCCTGTTCCAGAAGGATCTGAAGAAGGATCTCCTCCCAGAACCGCTGCAGTCGATGATGGAAACCAAAATTTTGCGTTGTTTGATGCTGTTTCAAGATCTCTGGAGGATCCTAAAGAGAAGTCATCACAGATGTGGTCCGCAGTTTCTAAGTTGACCGAGGAGAAAGCTGCAGCTTTGCAACAGAATCAGAAACTACGCCAGGAACTGGTATTTCATTTAGGATTGAATGTTATTTTCTTTATCTTCAAGTTTAGCTATTCTACTTACTCTAGTGCTTTGATCTCTTTCTATGATTGTGTTTGGGAGGAGATATTGCCTGTTTGTCATGGAATAAGGAATTGA

Protein sequence

MNSGDYINIQPSELKFAFELKKQSSCSLQLTNKTDKYVAFKVKTTNPKKYCVRPNAGIILPSSASNITVTMQGPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFKMRVVYTFANPPSPVPEGSEEGSPPRTAAVDDGNQNFALFDAVSRSLEDPKEKSSQMWSAVSKLTEEKAAALQQNQKLRQELVFHLGLNVIFFIFKFSYSTYSSALISFYDCVWEEILPVCHGIRN

Homology

[Close]

BLAST of Cp4.1LG17g03900 vs. ExPASy Swiss-Prot
Match: Q84WW5 (Vesicle-associated protein 1-3 OS=Arabidopsis thaliana OX=3702 GN=PVA13 PE=2 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 3.4e-71
Identity = 133/202 (65.84%), Postives = 164/202 (81.19%), Query Frame = 0


Query: 1   MNSGDYINIQPSELKFAFELKKQSSCSLQLTNK-TDKYVAFKVKTTNPKKYCVRPNAGII 60
           M +GD +NI P+ELKF FELKKQSSCS+QLTNK T + VAFKVKTTNP+KYCVRPN G++
Sbjct: 1   MTTGDLVNIHPTELKFPFELKKQSSCSMQLTNKTTTQCVAFKVKTTNPRKYCVRPNTGVV 60

Query: 61  LPSSASNITVTMQGPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEF 120
           LP  + N+TVTMQ  KEAP DMQCKDKFL+Q+VV  DGTTSK++ AE+FNK  G+V+++F
Sbjct: 61  LPGDSCNVTVTMQAQKEAPLDMQCKDKFLVQTVVVSDGTTSKEVLAEMFNKEAGRVIEDF 120

Query: 121 KMRVVYTFANPPSPVPEGSEEGSPPRTAAVDDGNQNFALFDAVSRSLEDPKEKSSQMWSA 180
           K+RVVY  ANPPSPVPEGSEEG+ P  +  D  +Q+ +LFD VSR+ E+  EKSS+ WS 
Sbjct: 121 KLRVVYIPANPPSPVPEGSEEGNSPMASLNDIASQSASLFDDVSRTFEETSEKSSEAWSM 180

Query: 181 VSKLTEEKAAALQQNQKLRQEL 202
           +SKLTEEK +A QQ+QKLR EL
Sbjct: 181 ISKLTEEKTSATQQSQKLRLEL 202

[Close]

BLAST of Cp4.1LG17g03900 vs. ExPASy Swiss-Prot
Match: Q9SHC8 (Vesicle-associated protein 1-2 OS=Arabidopsis thaliana OX=3702 GN=PVA12 PE=1 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.7e-54
Identity = 114/201 (56.72%), Postives = 142/201 (70.65%), Query Frame = 0


Query: 3   SGDYINIQPSELKFAFELKKQSSCSLQLTNKTDKYVAFKVKTTNPKKYCVRPNAGIILPS 62
           S + + I P +L+F FELKKQ SCSL L NKTD YVAFKVKTTNPKKYCVRPN G++ P 
Sbjct: 2   SNELLTIDPVDLQFPFELKKQISCSLYLGNKTDNYVAFKVKTTNPKKYCVRPNTGVVHPR 61

Query: 63  SASNITVTMQGPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFKMR 122
           S+S + VTMQ  KEAP D+QCKDKFL+Q VVA  G T KD++ E+F+K  G  V+E K+R
Sbjct: 62  SSSEVLVTMQAQKEAPADLQCKDKFLLQCVVASPGATPKDVTHEMFSKEAGHRVEETKLR 121

Query: 123 VVYTF-ANPPSPVPEGSEEGSPPRTAAVDDGN-QNFALFDAVSRSLEDPKEKSSQMWSAV 182
           VVY     PPSPV EGSEEGS PR +  D+GN  +F      S    D ++ SS+  + V
Sbjct: 122 VVYVAPPRPPSPVREGSEEGSSPRASVSDNGNASDFTAAPRFSADRVDAQDNSSEARALV 181

Query: 183 SKLTEEKAAALQQNQKLRQEL 202
           +KLTEEK +A+Q N +L+QEL
Sbjct: 182 TKLTEEKNSAVQLNNRLQQEL 202

[Close]

BLAST of Cp4.1LG17g03900 vs. ExPASy Swiss-Prot
Match: Q8VZ95 (Vesicle-associated protein 1-1 OS=Arabidopsis thaliana OX=3702 GN=PVA11 PE=1 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 2.1e-52
Identity = 106/203 (52.22%), Postives = 144/203 (70.94%), Query Frame = 0


Query: 1   MNSGDYINIQPSELKFAFELKKQSSCSLQLTNKTDKYVAFKVKTTNPKKYCVRPNAGIIL 60
           M++ + + ++P +L+F FELKKQ SCSL LTNKTD  VAFKVKTTNPKKYCVRPN G++L
Sbjct: 17  MSNSELLTVEPLDLQFPFELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNTGVVL 76

Query: 61  PSSASNITVTMQGPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFK 120
           P S   + VTMQ  KEAP DMQCKDKFL+Q V+A  G T+K+++ E+F+K  G  V+E K
Sbjct: 77  PRSTCEVLVTMQAQKEAPSDMQCKDKFLLQGVIASPGVTAKEVTPEMFSKEAGHRVEETK 136

Query: 121 MRVVYTF-ANPPSPVPEGSEEGSPPRTAAVDDGN-QNFALFDAVSRSLEDPKEKSSQMWS 180
           +RV Y     PPSPV EGSEEGS PR +  D+G+   F+    +  +    +E +S+  +
Sbjct: 137 LRVTYVAPPRPPSPVHEGSEEGSSPRASVSDNGHGSEFSFERFIVDNKAGHQENTSEARA 196

Query: 181 AVSKLTEEKAAALQQNQKLRQEL 202
            ++KLTEEK +A+Q N +L++EL
Sbjct: 197 LITKLTEEKQSAIQLNNRLQREL 219

[Close]

BLAST of Cp4.1LG17g03900 vs. ExPASy Swiss-Prot
Match: Q9SYC9 (Vesicle-associated protein 1-4 OS=Arabidopsis thaliana OX=3702 GN=PVA14 PE=2 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 9.1e-40
Identity = 91/194 (46.91%), Postives = 124/194 (63.92%), Query Frame = 0


Query: 3   SGDYINIQPSELKFAFELKKQSSCSLQLTNKTDKYVAFKVKTTNPKKYCVRPNAGIILPS 62
           S + + I P +++F  EL K+ SCSL LTNKT+ YVAFK KTTN KKY VRPN G++LP 
Sbjct: 173 SDELLIIDPVDVQFPIELNKKVSCSLNLTNKTENYVAFKAKTTNAKKYYVRPNVGVVLPR 232

Query: 63  SASNITVTMQGPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFKMR 122
           S+  + V MQ  KEAP DMQC+DK L Q  V    TT+KD+++E+F+K  G   +E +++
Sbjct: 233 SSCEVLVIMQALKEAPADMQCRDKLLFQCKVVEPETTAKDVTSEMFSKEAGHPAEETRLK 292

Query: 123 VVY-TFANPPSPVPEGSEEGSPPRTAAVDDGNQNFALFDAVSRSLEDPKEKSSQMWSAVS 182
           V+Y T   PPSPV EG+EEGS PR +  D+GN + A  D + RSL  P      ++S  +
Sbjct: 293 VMYVTPPQPPSPVQEGTEEGSSPRASVSDNGNASEAFVDML-RSLLVP------LFSNAA 352

Query: 183 KLTEEKAAALQQNQ 196
             T++    L Q Q
Sbjct: 353 SSTDDHGITLPQYQ 359

[Close]

BLAST of Cp4.1LG17g03900 vs. ExPASy Swiss-Prot
Match: B9DHD7 (Vesicle-associated protein 2-2 OS=Arabidopsis thaliana OX=3702 GN=PVA22 PE=1 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.2e-36
Identity = 79/145 (54.48%), Postives = 99/145 (68.28%), Query Frame = 0


Query: 7   INIQPSELKFAFELKKQSSCSLQLTNKTDKYVAFKVKTTNPKKYCVRPNAGIILPSSASN 66
           ++IQP  L+FA +LKKQ+SC +QLTN T  YVAFKVKTT+PKKYCVRPN G++ P S   
Sbjct: 6   LDIQPRTLQFAVDLKKQTSCVVQLTNTTHHYVAFKVKTTSPKKYCVRPNVGVVAPKSTCE 65

Query: 67  ITVTMQGPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFKMRVVYT 126
            TV MQ  KE PPDM CKDKFLIQS      TT +DI+A +F+K +GK ++E K+RV   
Sbjct: 66  FTVIMQAFKEPPPDMVCKDKFLIQSTAVSAETTDEDITASMFSKAEGKHIEENKLRVTLV 125

Query: 127 FANPPSPVPEGSEEGSPPRTAAVDD 152
              PPS  PE S   +P + A  +D
Sbjct: 126 ---PPSDSPELSPINTPKQGAVFED 147

[Close]

BLAST of Cp4.1LG17g03900 vs. NCBI nr
Match: XP_023515012.1 (vesicle-associated protein 1-3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 395 bits (1015), Expect = 2.96e-137
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MNSGDYINIQPSELKFAFELKKQSSCSLQLTNKTDKYVAFKVKTTNPKKYCVRPNAGIIL 60
           MNSGDYINIQPSELKFAFELKKQSSCSLQLTNKTDKYVAFKVKTTNPKKYCVRPNAGIIL
Sbjct: 1   MNSGDYINIQPSELKFAFELKKQSSCSLQLTNKTDKYVAFKVKTTNPKKYCVRPNAGIIL 60

Query: 61  PSSASNITVTMQGPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFK 120
           PSSASNITVTMQGPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFK
Sbjct: 61  PSSASNITVTMQGPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFK 120

Query: 121 MRVVYTFANPPSPVPEGSEEGSPPRTAAVDDGNQNFALFDAVSRSLEDPKEKSSQMWSAV 180
           MRVVYTFANPPSPVPEGSEEGSPPRTAAVDDGNQNFALFDAVSRSLEDPKEKSSQMWSAV
Sbjct: 121 MRVVYTFANPPSPVPEGSEEGSPPRTAAVDDGNQNFALFDAVSRSLEDPKEKSSQMWSAV 180

Query: 181 SKLTEEKAAALQQNQKLRQEL 201
           SKLTEEKAAALQQNQKLRQEL
Sbjct: 181 SKLTEEKAAALQQNQKLRQEL 201

[Close]

BLAST of Cp4.1LG17g03900 vs. NCBI nr
Match: XP_022964509.1 (vesicle-associated protein 1-3-like [Cucurbita moschata])

HSP 1 Score: 391 bits (1005), Expect = 9.86e-136
Identity = 199/201 (99.00%), Postives = 200/201 (99.50%), Query Frame = 0


Query: 1   MNSGDYINIQPSELKFAFELKKQSSCSLQLTNKTDKYVAFKVKTTNPKKYCVRPNAGIIL 60
           MNSGDYINIQPSELKFAFELKKQSSCSLQLTNKTDKYVAFKVKTTNPKKYCVRPNAGIIL
Sbjct: 1   MNSGDYINIQPSELKFAFELKKQSSCSLQLTNKTDKYVAFKVKTTNPKKYCVRPNAGIIL 60

Query: 61  PSSASNITVTMQGPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFK 120
           PSSASNITVTMQGPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFK
Sbjct: 61  PSSASNITVTMQGPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFK 120

Query: 121 MRVVYTFANPPSPVPEGSEEGSPPRTAAVDDGNQNFALFDAVSRSLEDPKEKSSQMWSAV 180
           MRVVY+FANPPSPVPEGSEEGSPPRTAAVDDGNQNFALFDAVSRSLEDPKEKSSQ WSAV
Sbjct: 121 MRVVYSFANPPSPVPEGSEEGSPPRTAAVDDGNQNFALFDAVSRSLEDPKEKSSQTWSAV 180

Query: 181 SKLTEEKAAALQQNQKLRQEL 201
           SKLTEEKAAALQQNQKLRQEL
Sbjct: 181 SKLTEEKAAALQQNQKLRQEL 201

[Close]

BLAST of Cp4.1LG17g03900 vs. NCBI nr
Match: KAG6593616.1 (Vesicle-associated protein 1-3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025962.1 Vesicle-associated protein 1-3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 391 bits (1005), Expect = 9.86e-136
Identity = 199/201 (99.00%), Postives = 199/201 (99.00%), Query Frame = 0


Query: 1   MNSGDYINIQPSELKFAFELKKQSSCSLQLTNKTDKYVAFKVKTTNPKKYCVRPNAGIIL 60
           MNSGDYINIQPSELKFAFELKKQSSCSLQLTNKTDKYVAFKVKTTNPKKYCVRPNAGIIL
Sbjct: 1   MNSGDYINIQPSELKFAFELKKQSSCSLQLTNKTDKYVAFKVKTTNPKKYCVRPNAGIIL 60

Query: 61  PSSASNITVTMQGPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFK 120
           PSSASNITVTMQGPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFK
Sbjct: 61  PSSASNITVTMQGPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFK 120

Query: 121 MRVVYTFANPPSPVPEGSEEGSPPRTAAVDDGNQNFALFDAVSRSLEDPKEKSSQMWSAV 180
           MRVVYTFANPPSPVPEGSEEGSPPRTAAVDDGNQNFALFDAVSRSLEDPKEKSSQ WS V
Sbjct: 121 MRVVYTFANPPSPVPEGSEEGSPPRTAAVDDGNQNFALFDAVSRSLEDPKEKSSQTWSTV 180

Query: 181 SKLTEEKAAALQQNQKLRQEL 201
           SKLTEEKAAALQQNQKLRQEL
Sbjct: 181 SKLTEEKAAALQQNQKLRQEL 201

[Close]

BLAST of Cp4.1LG17g03900 vs. NCBI nr
Match: XP_023000064.1 (vesicle-associated protein 1-3-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 387 bits (993), Expect = 6.63e-134
Identity = 196/201 (97.51%), Postives = 198/201 (98.51%), Query Frame = 0


Query: 1   MNSGDYINIQPSELKFAFELKKQSSCSLQLTNKTDKYVAFKVKTTNPKKYCVRPNAGIIL 60
           MNSGDYINIQPSELKFAFELKKQ+SCSLQLTNKTDKYVAFKVKTTNPKKYCVRPNAGIIL
Sbjct: 1   MNSGDYINIQPSELKFAFELKKQTSCSLQLTNKTDKYVAFKVKTTNPKKYCVRPNAGIIL 60

Query: 61  PSSASNITVTMQGPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFK 120
           PSSAS+ITVTMQGPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFK
Sbjct: 61  PSSASHITVTMQGPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFK 120

Query: 121 MRVVYTFANPPSPVPEGSEEGSPPRTAAVDDGNQNFALFDAVSRSLEDPKEKSSQMWSAV 180
           MRVVYTFANPPSPVPEGSEEGSPPRTAAVDDGNQNFALFDAVSRSLEDPKEKSSQ WS V
Sbjct: 121 MRVVYTFANPPSPVPEGSEEGSPPRTAAVDDGNQNFALFDAVSRSLEDPKEKSSQTWSTV 180

Query: 181 SKLTEEKAAALQQNQKLRQEL 201
           SKLTEEK AALQQNQKLRQEL
Sbjct: 181 SKLTEEKVAALQQNQKLRQEL 201

[Close]

BLAST of Cp4.1LG17g03900 vs. NCBI nr
Match: XP_038874796.1 (vesicle-associated protein 1-3 [Benincasa hispida])

HSP 1 Score: 373 bits (958), Expect = 1.42e-128
Identity = 189/201 (94.03%), Postives = 193/201 (96.02%), Query Frame = 0


Query: 1   MNSGDYINIQPSELKFAFELKKQSSCSLQLTNKTDKYVAFKVKTTNPKKYCVRPNAGIIL 60
           MN+GDYINIQPSELKF FEL+KQSSCSLQLTNKTDKYVAFKVKTTNPKKYCVRPNAGIIL
Sbjct: 1   MNTGDYINIQPSELKFPFELRKQSSCSLQLTNKTDKYVAFKVKTTNPKKYCVRPNAGIIL 60

Query: 61  PSSASNITVTMQGPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFK 120
           PSSASNITVTMQ PKE PPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFK
Sbjct: 61  PSSASNITVTMQAPKETPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFK 120

Query: 121 MRVVYTFANPPSPVPEGSEEGSPPRTAAVDDGNQNFALFDAVSRSLEDPKEKSSQMWSAV 180
           MRVVY FANPPSPVPEGSEEGSPPRT AVDDGNQNFALFDAVSRSLE+PKEKSSQ WS V
Sbjct: 121 MRVVYIFANPPSPVPEGSEEGSPPRTTAVDDGNQNFALFDAVSRSLEEPKEKSSQTWSNV 180

Query: 181 SKLTEEKAAALQQNQKLRQEL 201
           SKLTEEK AALQ+NQKLRQEL
Sbjct: 181 SKLTEEKDAALQKNQKLRQEL 201

[Close]

BLAST of Cp4.1LG17g03900 vs. ExPASy TrEMBL
Match: A0A6J1HNF1 (vesicle-associated protein 1-3-like OS=Cucurbita moschata OX=3662 GN=LOC111464514 PE=4 SV=1)

HSP 1 Score: 391 bits (1005), Expect = 4.77e-136
Identity = 199/201 (99.00%), Postives = 200/201 (99.50%), Query Frame = 0


Query: 1   MNSGDYINIQPSELKFAFELKKQSSCSLQLTNKTDKYVAFKVKTTNPKKYCVRPNAGIIL 60
           MNSGDYINIQPSELKFAFELKKQSSCSLQLTNKTDKYVAFKVKTTNPKKYCVRPNAGIIL
Sbjct: 1   MNSGDYINIQPSELKFAFELKKQSSCSLQLTNKTDKYVAFKVKTTNPKKYCVRPNAGIIL 60

Query: 61  PSSASNITVTMQGPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFK 120
           PSSASNITVTMQGPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFK
Sbjct: 61  PSSASNITVTMQGPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFK 120

Query: 121 MRVVYTFANPPSPVPEGSEEGSPPRTAAVDDGNQNFALFDAVSRSLEDPKEKSSQMWSAV 180
           MRVVY+FANPPSPVPEGSEEGSPPRTAAVDDGNQNFALFDAVSRSLEDPKEKSSQ WSAV
Sbjct: 121 MRVVYSFANPPSPVPEGSEEGSPPRTAAVDDGNQNFALFDAVSRSLEDPKEKSSQTWSAV 180

Query: 181 SKLTEEKAAALQQNQKLRQEL 201
           SKLTEEKAAALQQNQKLRQEL
Sbjct: 181 SKLTEEKAAALQQNQKLRQEL 201

[Close]

BLAST of Cp4.1LG17g03900 vs. ExPASy TrEMBL
Match: A0A6J1KIV3 (vesicle-associated protein 1-3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111494368 PE=4 SV=1)

HSP 1 Score: 387 bits (993), Expect = 3.21e-134
Identity = 196/201 (97.51%), Postives = 198/201 (98.51%), Query Frame = 0


Query: 1   MNSGDYINIQPSELKFAFELKKQSSCSLQLTNKTDKYVAFKVKTTNPKKYCVRPNAGIIL 60
           MNSGDYINIQPSELKFAFELKKQ+SCSLQLTNKTDKYVAFKVKTTNPKKYCVRPNAGIIL
Sbjct: 1   MNSGDYINIQPSELKFAFELKKQTSCSLQLTNKTDKYVAFKVKTTNPKKYCVRPNAGIIL 60

Query: 61  PSSASNITVTMQGPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFK 120
           PSSAS+ITVTMQGPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFK
Sbjct: 61  PSSASHITVTMQGPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFK 120

Query: 121 MRVVYTFANPPSPVPEGSEEGSPPRTAAVDDGNQNFALFDAVSRSLEDPKEKSSQMWSAV 180
           MRVVYTFANPPSPVPEGSEEGSPPRTAAVDDGNQNFALFDAVSRSLEDPKEKSSQ WS V
Sbjct: 121 MRVVYTFANPPSPVPEGSEEGSPPRTAAVDDGNQNFALFDAVSRSLEDPKEKSSQTWSTV 180

Query: 181 SKLTEEKAAALQQNQKLRQEL 201
           SKLTEEK AALQQNQKLRQEL
Sbjct: 181 SKLTEEKVAALQQNQKLRQEL 201

[Close]

BLAST of Cp4.1LG17g03900 vs. ExPASy TrEMBL
Match: A0A1S3C7R5 (vesicle-associated protein 1-3 OS=Cucumis melo OX=3656 GN=LOC103497662 PE=4 SV=1)

HSP 1 Score: 369 bits (946), Expect = 4.62e-127
Identity = 187/201 (93.03%), Postives = 191/201 (95.02%), Query Frame = 0


Query: 1   MNSGDYINIQPSELKFAFELKKQSSCSLQLTNKTDKYVAFKVKTTNPKKYCVRPNAGIIL 60
           MN+GDYINIQPSELKF FEL+KQSSCSLQLTNKTDKYVAFKVKTTNPKKYCVRPNAGIIL
Sbjct: 1   MNTGDYINIQPSELKFPFELRKQSSCSLQLTNKTDKYVAFKVKTTNPKKYCVRPNAGIIL 60

Query: 61  PSSASNITVTMQGPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFK 120
           PSSASNITVTMQ PKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFK
Sbjct: 61  PSSASNITVTMQAPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFK 120

Query: 121 MRVVYTFANPPSPVPEGSEEGSPPRTAAVDDGNQNFALFDAVSRSLEDPKEKSSQMWSAV 180
           MRVVY FANPPSPVPEGSEEGSPPRT  VDDGNQNFALFDAVSRSLE+PKEKSSQ WS V
Sbjct: 121 MRVVYIFANPPSPVPEGSEEGSPPRTTGVDDGNQNFALFDAVSRSLEEPKEKSSQAWSNV 180

Query: 181 SKLTEEKAAALQQNQKLRQEL 201
           SKLTEEK AAL +N KLRQEL
Sbjct: 181 SKLTEEKDAALLKNHKLRQEL 201

[Close]

BLAST of Cp4.1LG17g03900 vs. ExPASy TrEMBL
Match: A0A0A0KDW5 (MSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G109670 PE=4 SV=1)

HSP 1 Score: 367 bits (941), Expect = 2.67e-126
Identity = 186/201 (92.54%), Postives = 191/201 (95.02%), Query Frame = 0


Query: 1   MNSGDYINIQPSELKFAFELKKQSSCSLQLTNKTDKYVAFKVKTTNPKKYCVRPNAGIIL 60
           MN+GDYINIQPSELKF FEL+KQSSCSLQLTNKTDKYVAFKVKTTNPKKYCVRPNAGIIL
Sbjct: 1   MNTGDYINIQPSELKFPFELRKQSSCSLQLTNKTDKYVAFKVKTTNPKKYCVRPNAGIIL 60

Query: 61  PSSASNITVTMQGPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFK 120
           PSSASNITVTMQ PKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFK
Sbjct: 61  PSSASNITVTMQAPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFK 120

Query: 121 MRVVYTFANPPSPVPEGSEEGSPPRTAAVDDGNQNFALFDAVSRSLEDPKEKSSQMWSAV 180
           MRVVY FANPPSPVPEGSEEGSPPRT  VDDG+QNFALFDAVSRSLE+PKEKSSQ WS V
Sbjct: 121 MRVVYIFANPPSPVPEGSEEGSPPRTTGVDDGSQNFALFDAVSRSLEEPKEKSSQAWSNV 180

Query: 181 SKLTEEKAAALQQNQKLRQEL 201
           SKLTEEK AAL +N KLRQEL
Sbjct: 181 SKLTEEKDAALLKNHKLRQEL 201

[Close]

BLAST of Cp4.1LG17g03900 vs. ExPASy TrEMBL
Match: A0A6J1D081 (vesicle-associated protein 1-3 OS=Momordica charantia OX=3673 GN=LOC111016181 PE=4 SV=1)

HSP 1 Score: 353 bits (906), Expect = 5.68e-121
Identity = 176/201 (87.56%), Postives = 189/201 (94.03%), Query Frame = 0


Query: 1   MNSGDYINIQPSELKFAFELKKQSSCSLQLTNKTDKYVAFKVKTTNPKKYCVRPNAGIIL 60
           MN+G+YINIQPSELKF FE+KKQSSCSLQLTNKT+KYVAFKVKTTNPKKYCVRPNAG+IL
Sbjct: 1   MNTGEYINIQPSELKFPFEVKKQSSCSLQLTNKTEKYVAFKVKTTNPKKYCVRPNAGVIL 60

Query: 61  PSSASNITVTMQGPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFK 120
           P+S SNITVTMQ PKE+PPDMQCKDKFLIQSVVAPDG  SKDIS ELFNKGDGK VDE+K
Sbjct: 61  PNSTSNITVTMQAPKESPPDMQCKDKFLIQSVVAPDGVASKDISPELFNKGDGKAVDEYK 120

Query: 121 MRVVYTFANPPSPVPEGSEEGSPPRTAAVDDGNQNFALFDAVSRSLEDPKEKSSQMWSAV 180
           MRVVY FANPPSPVPEGSEEGSPPRT  ++DGNQNFALFDAVSRSLE+PKEKSSQ  SA+
Sbjct: 121 MRVVYIFANPPSPVPEGSEEGSPPRTTGLEDGNQNFALFDAVSRSLEEPKEKSSQASSAI 180

Query: 181 SKLTEEKAAALQQNQKLRQEL 201
           SKLTEEKAAALQQ+QKLRQEL
Sbjct: 181 SKLTEEKAAALQQSQKLRQEL 201

[Close]

BLAST of Cp4.1LG17g03900 vs. TAIR 10
Match: AT4G00170.1 (Plant VAMP (vesicle-associated membrane protein) family protein )

HSP 1 Score: 269.6 bits (688), Expect = 2.4e-72
Identity = 133/202 (65.84%), Postives = 164/202 (81.19%), Query Frame = 0


Query: 1   MNSGDYINIQPSELKFAFELKKQSSCSLQLTNK-TDKYVAFKVKTTNPKKYCVRPNAGII 60
           M +GD +NI P+ELKF FELKKQSSCS+QLTNK T + VAFKVKTTNP+KYCVRPN G++
Sbjct: 1   MTTGDLVNIHPTELKFPFELKKQSSCSMQLTNKTTTQCVAFKVKTTNPRKYCVRPNTGVV 60

Query: 61  LPSSASNITVTMQGPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEF 120
           LP  + N+TVTMQ  KEAP DMQCKDKFL+Q+VV  DGTTSK++ AE+FNK  G+V+++F
Sbjct: 61  LPGDSCNVTVTMQAQKEAPLDMQCKDKFLVQTVVVSDGTTSKEVLAEMFNKEAGRVIEDF 120

Query: 121 KMRVVYTFANPPSPVPEGSEEGSPPRTAAVDDGNQNFALFDAVSRSLEDPKEKSSQMWSA 180
           K+RVVY  ANPPSPVPEGSEEG+ P  +  D  +Q+ +LFD VSR+ E+  EKSS+ WS 
Sbjct: 121 KLRVVYIPANPPSPVPEGSEEGNSPMASLNDIASQSASLFDDVSRTFEETSEKSSEAWSM 180

Query: 181 VSKLTEEKAAALQQNQKLRQEL 202
           +SKLTEEK +A QQ+QKLR EL
Sbjct: 181 ISKLTEEKTSATQQSQKLRLEL 202

[Close]

BLAST of Cp4.1LG17g03900 vs. TAIR 10
Match: AT2G45140.1 (plant VAP homolog 12 )

HSP 1 Score: 214.2 bits (544), Expect = 1.2e-55
Identity = 114/201 (56.72%), Postives = 142/201 (70.65%), Query Frame = 0


Query: 3   SGDYINIQPSELKFAFELKKQSSCSLQLTNKTDKYVAFKVKTTNPKKYCVRPNAGIILPS 62
           S + + I P +L+F FELKKQ SCSL L NKTD YVAFKVKTTNPKKYCVRPN G++ P 
Sbjct: 2   SNELLTIDPVDLQFPFELKKQISCSLYLGNKTDNYVAFKVKTTNPKKYCVRPNTGVVHPR 61

Query: 63  SASNITVTMQGPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFKMR 122
           S+S + VTMQ  KEAP D+QCKDKFL+Q VVA  G T KD++ E+F+K  G  V+E K+R
Sbjct: 62  SSSEVLVTMQAQKEAPADLQCKDKFLLQCVVASPGATPKDVTHEMFSKEAGHRVEETKLR 121

Query: 123 VVYTF-ANPPSPVPEGSEEGSPPRTAAVDDGN-QNFALFDAVSRSLEDPKEKSSQMWSAV 182
           VVY     PPSPV EGSEEGS PR +  D+GN  +F      S    D ++ SS+  + V
Sbjct: 122 VVYVAPPRPPSPVREGSEEGSSPRASVSDNGNASDFTAAPRFSADRVDAQDNSSEARALV 181

Query: 183 SKLTEEKAAALQQNQKLRQEL 202
           +KLTEEK +A+Q N +L+QEL
Sbjct: 182 TKLTEEKNSAVQLNNRLQQEL 202

[Close]

BLAST of Cp4.1LG17g03900 vs. TAIR 10
Match: AT3G60600.1 (vesicle associated protein )

HSP 1 Score: 207.2 bits (526), Expect = 1.5e-53
Identity = 106/203 (52.22%), Postives = 144/203 (70.94%), Query Frame = 0


Query: 1   MNSGDYINIQPSELKFAFELKKQSSCSLQLTNKTDKYVAFKVKTTNPKKYCVRPNAGIIL 60
           M++ + + ++P +L+F FELKKQ SCSL LTNKTD  VAFKVKTTNPKKYCVRPN G++L
Sbjct: 17  MSNSELLTVEPLDLQFPFELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNTGVVL 76

Query: 61  PSSASNITVTMQGPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFK 120
           P S   + VTMQ  KEAP DMQCKDKFL+Q V+A  G T+K+++ E+F+K  G  V+E K
Sbjct: 77  PRSTCEVLVTMQAQKEAPSDMQCKDKFLLQGVIASPGVTAKEVTPEMFSKEAGHRVEETK 136

Query: 121 MRVVYTF-ANPPSPVPEGSEEGSPPRTAAVDDGN-QNFALFDAVSRSLEDPKEKSSQMWS 180
           +RV Y     PPSPV EGSEEGS PR +  D+G+   F+    +  +    +E +S+  +
Sbjct: 137 LRVTYVAPPRPPSPVHEGSEEGSSPRASVSDNGHGSEFSFERFIVDNKAGHQENTSEARA 196

Query: 181 AVSKLTEEKAAALQQNQKLRQEL 202
            ++KLTEEK +A+Q N +L++EL
Sbjct: 197 LITKLTEEKQSAIQLNNRLQREL 219

[Close]

BLAST of Cp4.1LG17g03900 vs. TAIR 10
Match: AT3G60600.3 (vesicle associated protein )

HSP 1 Score: 189.9 bits (481), Expect = 2.4e-48
Identity = 93/161 (57.76%), Postives = 119/161 (73.91%), Query Frame = 0


Query: 1   MNSGDYINIQPSELKFAFELKKQSSCSLQLTNKTDKYVAFKVKTTNPKKYCVRPNAGIIL 60
           M++ + + ++P +L+F FELKKQ SCSL LTNKTD  VAFKVKTTNPKKYCVRPN G++L
Sbjct: 17  MSNSELLTVEPLDLQFPFELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNTGVVL 76

Query: 61  PSSASNITVTMQGPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFK 120
           P S   + VTMQ  KEAP DMQCKDKFL+Q V+A  G T+K+++ E+F+K  G  V+E K
Sbjct: 77  PRSTCEVLVTMQAQKEAPSDMQCKDKFLLQGVIASPGVTAKEVTPEMFSKEAGHRVEETK 136

Query: 121 MRVVYTF-ANPPSPVPEGSEEGSPPRTAAVDDGN-QNFALF 160
           +RV Y     PPSPV EGSEEGS PR +  D+G+   F++F
Sbjct: 137 LRVTYVAPPRPPSPVHEGSEEGSSPRASVSDNGHGSEFSIF 177

[Close]

BLAST of Cp4.1LG17g03900 vs. TAIR 10
Match: AT3G60600.2 (vesicle associated protein )

HSP 1 Score: 188.3 bits (477), Expect = 7.1e-48
Identity = 91/154 (59.09%), Postives = 115/154 (74.68%), Query Frame = 0


Query: 1   MNSGDYINIQPSELKFAFELKKQSSCSLQLTNKTDKYVAFKVKTTNPKKYCVRPNAGIIL 60
           M++ + + ++P +L+F FELKKQ SCSL LTNKTD  VAFKVKTTNPKKYCVRPN G++L
Sbjct: 17  MSNSELLTVEPLDLQFPFELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNTGVVL 76

Query: 61  PSSASNITVTMQGPKEAPPDMQCKDKFLIQSVVAPDGTTSKDISAELFNKGDGKVVDEFK 120
           P S   + VTMQ  KEAP DMQCKDKFL+Q V+A  G T+K+++ E+F+K  G  V+E K
Sbjct: 77  PRSTCEVLVTMQAQKEAPSDMQCKDKFLLQGVIASPGVTAKEVTPEMFSKEAGHRVEETK 136

Query: 121 MRVVYTF-ANPPSPVPEGSEEGSPPRTAAVDDGN 154
           +RV Y     PPSPV EGSEEGS PR +  D+G+
Sbjct: 137 LRVTYVAPPRPPSPVHEGSEEGSSPRASVSDNGH 170

The following BLAST results are available for this feature:

BLAST of Cp4.1LG17g03900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84WW5	3.4e-71	65.84	Vesicle-associated protein 1-3 OS=Arabidopsis thaliana OX=3702 GN=PVA13 PE=2 SV=...	[more]
Q9SHC8	1.7e-54	56.72	Vesicle-associated protein 1-2 OS=Arabidopsis thaliana OX=3702 GN=PVA12 PE=1 SV=...	[more]
Q8VZ95	2.1e-52	52.22	Vesicle-associated protein 1-1 OS=Arabidopsis thaliana OX=3702 GN=PVA11 PE=1 SV=...	[more]
Q9SYC9	9.1e-40	46.91	Vesicle-associated protein 1-4 OS=Arabidopsis thaliana OX=3702 GN=PVA14 PE=2 SV=...	[more]
B9DHD7	1.2e-36	54.48	Vesicle-associated protein 2-2 OS=Arabidopsis thaliana OX=3702 GN=PVA22 PE=1 SV=...	[more]

BLAST of Cp4.1LG17g03900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023515012.1	2.96e-137	100.00	vesicle-associated protein 1-3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022964509.1	9.86e-136	99.00	vesicle-associated protein 1-3-like [Cucurbita moschata]	[more]
KAG6593616.1	9.86e-136	99.00	Vesicle-associated protein 1-3, partial [Cucurbita argyrosperma subsp. sororia] ...	[more]
XP_023000064.1	6.63e-134	97.51	vesicle-associated protein 1-3-like isoform X2 [Cucurbita maxima]	[more]
XP_038874796.1	1.42e-128	94.03	vesicle-associated protein 1-3 [Benincasa hispida]	[more]

BLAST of Cp4.1LG17g03900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HNF1	4.77e-136	99.00	vesicle-associated protein 1-3-like OS=Cucurbita moschata OX=3662 GN=LOC11146451...	[more]
A0A6J1KIV3	3.21e-134	97.51	vesicle-associated protein 1-3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A1S3C7R5	4.62e-127	93.03	vesicle-associated protein 1-3 OS=Cucumis melo OX=3656 GN=LOC103497662 PE=4 SV=1	[more]
A0A0A0KDW5	2.67e-126	92.54	MSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G109670 PE=4 SV...	[more]
A0A6J1D081	5.68e-121	87.56	vesicle-associated protein 1-3 OS=Momordica charantia OX=3673 GN=LOC111016181 PE...	[more]

BLAST of Cp4.1LG17g03900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G00170.1	2.4e-72	65.84	Plant VAMP (vesicle-associated membrane protein) family protein	[more]
AT2G45140.1	1.2e-55	56.72	plant VAP homolog 12	[more]
AT3G60600.1	1.5e-53	52.22	vesicle associated protein	[more]
AT3G60600.3	2.4e-48	57.76	vesicle associated protein	[more]
AT3G60600.2	7.1e-48	59.09	vesicle associated protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 180..200
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..149
None	No IPR available	PANTHER	PTHR10809:SF111	VESICLE-ASSOCIATED PROTEIN 1-3	coord: 1..201
IPR000535	Major sperm protein (MSP) domain	PFAM	PF00635	Motile_Sperm	coord: 7..108 e-value: 3.0E-33 score: 113.9
IPR000535	Major sperm protein (MSP) domain	PROSITE	PS50202	MSP	coord: 6..126 score: 31.170374
IPR013783	Immunoglobulin-like fold	GENE3D	2.60.40.10	Immunoglobulins	coord: 2..129 e-value: 7.0E-45 score: 154.0
IPR016763	Vesicle-associated membrane-protein-associated protein	PANTHER	PTHR10809	VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN	coord: 1..201
IPR008962	PapD-like superfamily	SUPERFAMILY	49354	PapD-like	coord: 2..138

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG17g03900.1	Cp4.1LG17g03900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090158	endoplasmic reticulum membrane organization
biological_process	GO:0061817	endoplasmic reticulum-plasma membrane tethering
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane