Cp4.1LG16g06250 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG16g06250
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	ras-related protein Rab11C-like
Location	Cp4.1LG16: 6807796 .. 6810542 (-)
RNA-Seq Expression	Cp4.1LG16g06250
Synteny	Cp4.1LG16g06250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTATTTATTTATTTATTTTCTTCACCACCTTTTTGGCTCGCTCTCGCCACAGACCACAACTCCATCGATCTTCCCTGTTCTGCCTGAAATTTCTCTGCTTAATTCGCTCCTCTTTCTTCCTTCGATTCTTCCGTCGCAGTCTTCGTAGTCAAACTTCTTTCCTACGGACCAATCCACTGACGTTATCTCCATTTCTTCGCCATCAGGTTTGAGTTCTTCGTTCCCATTTTGGGGATTTCATTGCTTCTTCAAGTTTTCGTTTCAGCTACTGTAGATGATTGTGATTCTTTCCGTTTTGGATTATGAATTGCTGAATTTTTTACTTTTGGATTAGGTTTGTTCGATAAATTTGAGGCGGAGACGGCTATGGCTCATAAGGTGGACCACGAGTACGACTATCTGTTCAAGATTGTTCTGATCGGGGATTCTGGCGTCGGGAAGTCCAACATTCTTTCTAGATTTACTAGAAATGAGTTCTGCTTGGAGTCCAAATCCACCATTGGTGTTGAGTTCTCGACCAGGACTCTCCAGGTAGAAGCTCAATCGTTTGAACTCTCAGAGATTTTTCCTTTCATTTTGCGCGTTGTTTAGTTATCATTTTTTCAATTTACTGATTGATCGCATGAGTTTCCTTTTGTGCTCGACGAACTTCAAAAATTTAGGTTCGGATGATTTCTAACTGGTAGCTTCCGCCTTGGTTTTTACTTTCAATCGTTGAAGTACAGTGGATTCGTTGTATGTAGGGTTTGAGTAAAGCTTCGAAGTAGCTGTTTTATTGCTTGAGGCTACAAAACGTTTAGAATTGAATGAATAGGTGCTGGATTTATGGAAAATAAGTAATATGTTGCTCATCTAACAAGCAAACCATCAGGATTTTTAGCTGTGTCCAGGGAAGACTGTGAGACGATGGAGCCATGTGTGCTCAATTATTCTAAAATATGGTTGCGGGCAGTTGAAGCAGTAGGAAATTGGCAGAATTATTTTTCCCGAATTTATAGTATTCCACTAATTTTGCAAGTGTTCATGCTCTTAAAATTTAGAGTGTTTTCAATAATGGCAAGTATTATTAAAGGATTGTTCTCTTATGAAAAGTTAAAACCATGATTTCTTATGAAAAGTTGGTATGCTGTCAACATTCAACATTGACATATGCTTCTTTCTTTGAAATTGGATGTTCAAATTCTCATACCCCATGTTTATTATACTAAAAGATAGAGAAGTTAGGGTATGCCCATTCTATAATGGCCAAACCAATAGATATTCGCTGAGAGATAGCCATTTTTTCTTCTGAAAGGCTATGAGTTAATGGAGCAAAGATTCTGATATCTTTGAAGGAGCTGGAGGTGGGAGATAGAGGTCTCTGTAATAGCTAAAGTCCACCACTAGGAGATATTGTCCGGTTTGGACCGTTGCGTATCGCCATCAGCCTCATGGTTTTAAAATGTGTCTACTAGGGAAAGGTTTCCACACCCTTATAAGGAATGCTTCGTTCCCCTCCAAATCGATGCGGGATCTCAGTCTCATACGAAAGCTAAAGTCCACCACTAGTAGATATTGTCCGTTTTGGACCGTTACGTATCGCCGTCAGCCTCACAGTTCTAAAACGTGTCTACTAGGGAGAGGTTTCCACACCCTTATAAGGAATGCTTCGTTTCCCTCCAACCGATGCGGGAAACCAAAGTTATCCTGTATTCAAGCATTCTGAATCCAGTCCCACCTTTTCTTGTTTGTCCTAGACCCAAAATTCTGTTATAAGAAAGGAAGGCCAGTGAGATGGAGGGTTGCCCTCATTGAAGATATAACTGAATTGGGCAAATATTATTCAGCCTGATGCATTTTCCATTTCAGAGTTCCATACTCTTAGTAGTTGAAATGTTAGCCATCTGATTTGAGCCAATATTATTGACATACAGGTAGAAGGGAAGACAGTCAAGGCACAGATCTGGGACACAGCAGGTCAGGAGCGATACCGAGCGATTACGAGTGCTTATTATAGGGGAGCCGTTGGCGCTCTCCTAGTCTACGATCTGACAAAGAGACCGACGTTCGAGAATGTACAAAGATGGCTACGGGAGCTGAGAGATCATGCAGACTCCAACATCGTGATTGTGATGATTGGAAACAAATCTGACCTTAGTCATCTTAGATCTGTCTCAGAGGATGATGGGCAGAGCATGGCAGAGAAGGAAGGCCTTTCCTTCATCGAGACATCAGCCTTGGATGCCACTAATATCGACAAGGCATTCCAAACCATCTTGACAGAGATCTACCATATCATCAGCAAAAAGGCATTGGCAGCCAAGGAAGCCGCGGCTGCTAGTGTCGCCCGTCCCAGTCAAGGAACCACCATCGACGTTTCCGATACTACCGGGGACTCGAACAGAAAGGGTTGCTGTTCTTCTTGAGCAGATACAGAAAGACAGAACTGATAATTCGCATCAAAGGTTTCTCTTACCCCTTTTTCATAATTGATCTGTTAGTTATTTTCAACAGTTTCCAAATTTCTTCCTTAATTCCTTTACTAACCCATTCATATAACAATTCCCTTGAGGAATTTGATTCGTATTTGTTCTTCATCTGCAACTCTTGTTCAGAAATTCTTACGTTTGTTGGCTTAGCAATTAAACAGATATGAAACAGTTGGGATTACTGAGTTCTATGTGTTTGTGACTGGCTGCCTTATTATTTTGTACTAAACAGCATTGATTTTTTTTTTTTTTTTTTTTTTTTTTTTAAGCAATTTAAC

mRNA sequence

TTTATTTATTTATTTATTTTCTTCACCACCTTTTTGGCTCGCTCTCGCCACAGACCACAACTCCATCGATCTTCCCTGTTCTGCCTGAAATTTCTCTGCTTAATTCGCTCCTCTTTCTTCCTTCGATTCTTCCGTCGCAGTCTTCGTAGTCAAACTTCTTTCCTACGGACCAATCCACTGACGTTATCTCCATTTCTTCGCCATCAGGTTTGTTCGATAAATTTGAGGCGGAGACGGCTATGGCTCATAAGGTGGACCACGAGTACGACTATCTGTTCAAGATTGTTCTGATCGGGGATTCTGGCGTCGGGAAGTCCAACATTCTTTCTAGATTTACTAGAAATGAGTTCTGCTTGGAGTCCAAATCCACCATTGGTGTTGAGTTCTCGACCAGGACTCTCCAGGTAGAAGGGAAGACAGTCAAGGCACAGATCTGGGACACAGCAGGTCAGGAGCGATACCGAGCGATTACGAGTGCTTATTATAGGGGAGCCGTTGGCGCTCTCCTAGTCTACGATCTGACAAAGAGACCGACGTTCGAGAATGTACAAAGATGGCTACGGGAGCTGAGAGATCATGCAGACTCCAACATCGTGATTGTGATGATTGGAAACAAATCTGACCTTAGTCATCTTAGATCTGTCTCAGAGGATGATGGGCAGAGCATGGCAGAGAAGGAAGGCCTTTCCTTCATCGAGACATCAGCCTTGGATGCCACTAATATCGACAAGGCATTCCAAACCATCTTGACAGAGATCTACCATATCATCAGCAAAAAGGCATTGGCAGCCAAGGAAGCCGCGGCTGCTAGTGTCGCCCGTCCCAGTCAAGGAACCACCATCGACGTTTCCGATACTACCGGGGACTCGAACAGAAAGGGTTGCTGTTCTTCTTGAGCAGATACAGAAAGACAGAACTGATAATTCGCATCAAAGGTTTCTCTTACCCCTTTTTCATAATTGATCTGTTAGTTATTTTCAACAGTTTCCAAATTTCTTCCTTAATTCCTTTACTAACCCATTCATATAACAATTCCCTTGAGGAATTTGATTCGTATTTGTTCTTCATCTGCAACTCTTGTTCAGAAATTCTTACGTTTGTTGGCTTAGCAATTAAACAGATATGAAACAGTTGGGATTACTGAGTTCTATGTGTTTGTGACTGGCTGCCTTATTATTTTGTACTAAACAGCATTGATTTTTTTTTTTTTTTTTTTTTTTTTTTTAAGCAATTTAAC

Coding sequence (CDS)

ATGGCTCATAAGGTGGACCACGAGTACGACTATCTGTTCAAGATTGTTCTGATCGGGGATTCTGGCGTCGGGAAGTCCAACATTCTTTCTAGATTTACTAGAAATGAGTTCTGCTTGGAGTCCAAATCCACCATTGGTGTTGAGTTCTCGACCAGGACTCTCCAGGTAGAAGGGAAGACAGTCAAGGCACAGATCTGGGACACAGCAGGTCAGGAGCGATACCGAGCGATTACGAGTGCTTATTATAGGGGAGCCGTTGGCGCTCTCCTAGTCTACGATCTGACAAAGAGACCGACGTTCGAGAATGTACAAAGATGGCTACGGGAGCTGAGAGATCATGCAGACTCCAACATCGTGATTGTGATGATTGGAAACAAATCTGACCTTAGTCATCTTAGATCTGTCTCAGAGGATGATGGGCAGAGCATGGCAGAGAAGGAAGGCCTTTCCTTCATCGAGACATCAGCCTTGGATGCCACTAATATCGACAAGGCATTCCAAACCATCTTGACAGAGATCTACCATATCATCAGCAAAAAGGCATTGGCAGCCAAGGAAGCCGCGGCTGCTAGTGTCGCCCGTCCCAGTCAAGGAACCACCATCGACGTTTCCGATACTACCGGGGACTCGAACAGAAAGGGTTGCTGTTCTTCTTGA

Protein sequence

MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFENVQRWLRELRDHADSNIVIVMIGNKSDLSHLRSVSEDDGQSMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKKALAAKEAAAASVARPSQGTTIDVSDTTGDSNRKGCCSS

Homology

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BLAST of Cp4.1LG16g06250 vs. ExPASy Swiss-Prot
Match: Q40193 (Ras-related protein Rab11C OS=Lotus japonicus OX=34305 GN=RAB11C PE=2 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 2.4e-100
Identity = 185/218 (84.86%), Postives = 209/218 (95.87%), Query Frame = 0


Query: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT 60
           MAH+VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEF+TRTLQVEGKT
Sbjct: 1   MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFENVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TKR TF+NVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 VMIGNKSDLSHLRSVSEDDGQSMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180
           +M GNKSDL+HLR+VSEDDG +++EKEGLSF+ETSAL+ATNI+KAFQTILTEIYHI+SKK
Sbjct: 121 MMAGNKSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKK 180

Query: 181 ALAAKEAAAASVARPSQGTTIDVSDTTGDSNRKGCCSS 219
           ALAA+EA A + + P QGTTI+V+DT+G++ +KGCCS+
Sbjct: 181 ALAAQEATAGA-SVPGQGTTINVADTSGNT-KKGCCST 216

[Close]

BLAST of Cp4.1LG16g06250 vs. ExPASy Swiss-Prot
Match: Q96283 (Ras-related protein RABA2c OS=Arabidopsis thaliana OX=3702 GN=RABA2C PE=2 SV=4)

HSP 1 Score: 362.1 bits (928), Expect = 4.5e-99
Identity = 184/218 (84.40%), Postives = 203/218 (93.12%), Query Frame = 0


Query: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT 60
           M H+VD EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEF+TRT QVEGKT
Sbjct: 1   MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFENVQRWLRELRDHADSNIVI 120
           +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TKR TF+NV RWLRELRDHADSNIVI
Sbjct: 61  IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 VMIGNKSDLSHLRSVSEDDGQSMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180
           +M GNKSDL+HLRSV+E+DGQS+AEKEGLSF+ETSAL+ATN++KAFQTIL EIYHIISKK
Sbjct: 121 MMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKK 180

Query: 181 ALAAKEAAAASVARPSQGTTIDVSDTTGDSNRKGCCSS 219
           ALAA+EAAAA+ A P QGTTI+V DT+G + R  CCSS
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVDDTSGGAKR-ACCSS 217

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BLAST of Cp4.1LG16g06250 vs. ExPASy Swiss-Prot
Match: Q9FIF9 (Ras-related protein RABA2d OS=Arabidopsis thaliana OX=3702 GN=RABA2D PE=2 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 3.8e-98
Identity = 179/218 (82.11%), Postives = 206/218 (94.50%), Query Frame = 0


Query: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT 60
           MAH+V+ +YDYLFKIVLIGDSGVGK+NILSRFTRNEFCLESKSTIGVEF+TRTLQVEGKT
Sbjct: 1   MAHRVEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFENVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TKR TF+NV RWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 VMIGNKSDLSHLRSVSEDDGQSMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180
           +M GNK+DL+HLRSV+E+DGQ++AE EGLSF+ETSAL+ATN++KAFQT+L EIYHIISKK
Sbjct: 121 MMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKK 180

Query: 181 ALAAKEAAAASVARPSQGTTIDVSDTTGDSNRKGCCSS 219
           ALAA+EAAAA+ A P QGTTI+V DT+G + ++GCCS+
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVEDTSG-AGKRGCCST 217

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BLAST of Cp4.1LG16g06250 vs. ExPASy Swiss-Prot
Match: Q9LNW1 (Ras-related protein RABA2b OS=Arabidopsis thaliana OX=3702 GN=RABA2B PE=2 SV=2)

HSP 1 Score: 357.8 bits (917), Expect = 8.5e-98
Identity = 182/218 (83.49%), Postives = 205/218 (94.04%), Query Frame = 0


Query: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT 60
           MA+++DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEF+TRTLQVEGKT
Sbjct: 1   MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFENVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TKR TFENV RWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVI 120

Query: 121 VMIGNKSDLSHLRSVSEDDGQSMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180
           +M GNKSDL+HLRSV+++DG+S+AEKEGLSF+ETSAL+ATNI+KAFQTIL+EIYHIISKK
Sbjct: 121 MMAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKK 180

Query: 181 ALAAKEAAAASVARPSQGTTIDVSDTTGDSNRKGCCSS 219
           ALAA+EAA      P QGT I++SD++  +NRKGCCS+
Sbjct: 181 ALAAQEAAG---NLPGQGTAINISDSSA-TNRKGCCST 214

[Close]

BLAST of Cp4.1LG16g06250 vs. ExPASy Swiss-Prot
Match: Q39434 (Ras-related protein Rab2BV OS=Beta vulgaris OX=161934 GN=RAB2BV PE=2 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 7.2e-97
Identity = 182/218 (83.49%), Postives = 202/218 (92.66%), Query Frame = 0


Query: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT 60
           MA++VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEF+TRTLQVEGKT
Sbjct: 1   MANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFENVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TKR TF+NVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 VMIGNKSDLSHLRSVSEDDGQSMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180
           +M GNKSDL HLR+VSE+DGQ++AEKEGLSF+ETSAL+A NI+KAFQTILTEIYHIISKK
Sbjct: 121 MMAGNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKK 180

Query: 181 ALAAKEAAAASVARPSQGTTIDVSDTTGDSNRKGCCSS 219
           ALAA+E   AS   P QGTTI+V+D +  + R+ CCS+
Sbjct: 181 ALAAQE---ASSNLPGQGTTINVADASA-NQRRSCCST 214

[Close]

BLAST of Cp4.1LG16g06250 vs. NCBI nr
Match: XP_023512123.1 (ras-related protein Rab11C-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 422 bits (1085), Expect = 1.05e-148
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT 60
           MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT
Sbjct: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFENVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFENVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFENVQRWLRELRDHADSNIVI 120

Query: 121 VMIGNKSDLSHLRSVSEDDGQSMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180
           VMIGNKSDLSHLRSVSEDDGQSMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK
Sbjct: 121 VMIGNKSDLSHLRSVSEDDGQSMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180

Query: 181 ALAAKEAAAASVARPSQGTTIDVSDTTGDSNRKGCCSS 218
           ALAAKEAAAASVARPSQGTTIDVSDTTGDSNRKGCCSS
Sbjct: 181 ALAAKEAAAASVARPSQGTTIDVSDTTGDSNRKGCCSS 218

[Close]

BLAST of Cp4.1LG16g06250 vs. NCBI nr
Match: KAG7010528.1 (Ras-related protein Rab11C, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 420 bits (1080), Expect = 6.05e-148
Identity = 217/218 (99.54%), Postives = 218/218 (100.00%), Query Frame = 0


Query: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT 60
           MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT
Sbjct: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFENVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFENVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFENVQRWLRELRDHADSNIVI 120

Query: 121 VMIGNKSDLSHLRSVSEDDGQSMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180
           VMIGNKSDLSHLRSVSEDDGQSMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK
Sbjct: 121 VMIGNKSDLSHLRSVSEDDGQSMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180

Query: 181 ALAAKEAAAASVARPSQGTTIDVSDTTGDSNRKGCCSS 218
           ALAAKEAAAASVARPSQGTTIDVSDTTGDS+RKGCCSS
Sbjct: 181 ALAAKEAAAASVARPSQGTTIDVSDTTGDSHRKGCCSS 218

[Close]

BLAST of Cp4.1LG16g06250 vs. NCBI nr
Match: XP_022944214.1 (ras-related protein Rab11C-like [Cucurbita moschata])

HSP 1 Score: 420 bits (1079), Expect = 8.60e-148
Identity = 217/218 (99.54%), Postives = 217/218 (99.54%), Query Frame = 0


Query: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT 60
           MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT
Sbjct: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFENVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFENVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFENVQRWLRELRDHADSNIVI 120

Query: 121 VMIGNKSDLSHLRSVSEDDGQSMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180
           VMIGNKSDLSHLRSVSEDDGQSMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK
Sbjct: 121 VMIGNKSDLSHLRSVSEDDGQSMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180

Query: 181 ALAAKEAAAASVARPSQGTTIDVSDTTGDSNRKGCCSS 218
           ALAAKEAAAASVARPSQGTTIDVSDTTGDSNRK CCSS
Sbjct: 181 ALAAKEAAAASVARPSQGTTIDVSDTTGDSNRKSCCSS 218

[Close]

BLAST of Cp4.1LG16g06250 vs. NCBI nr
Match: XP_022986937.1 (ras-related protein Rab11C-like [Cucurbita maxima])

HSP 1 Score: 419 bits (1076), Expect = 2.46e-147
Identity = 216/218 (99.08%), Postives = 217/218 (99.54%), Query Frame = 0


Query: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT 60
           MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT
Sbjct: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFENVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFENVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFENVQRWLRELRDHADSNIVI 120

Query: 121 VMIGNKSDLSHLRSVSEDDGQSMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180
           VMIGNKSDLSHLRSVSEDDGQSMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK
Sbjct: 121 VMIGNKSDLSHLRSVSEDDGQSMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180

Query: 181 ALAAKEAAAASVARPSQGTTIDVSDTTGDSNRKGCCSS 218
           ALAAKEAAAASV RPSQGTTIDVSDTTGDS+RKGCCSS
Sbjct: 181 ALAAKEAAAASVTRPSQGTTIDVSDTTGDSDRKGCCSS 218

[Close]

BLAST of Cp4.1LG16g06250 vs. NCBI nr
Match: KAG6570681.1 (Ras-related protein Rab11C, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 417 bits (1073), Expect = 5.09e-146
Identity = 216/218 (99.08%), Postives = 217/218 (99.54%), Query Frame = 0


Query: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT 60
           MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT
Sbjct: 56  MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT 115

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFENVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFENVQRWLRELRDHADSNIVI
Sbjct: 116 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFENVQRWLRELRDHADSNIVI 175

Query: 121 VMIGNKSDLSHLRSVSEDDGQSMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180
           VMIGNKSDLSHLRSVSEDDGQSMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK
Sbjct: 176 VMIGNKSDLSHLRSVSEDDGQSMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 235

Query: 181 ALAAKEAAAASVARPSQGTTIDVSDTTGDSNRKGCCSS 218
           ALAAKEAAAASVARPSQGTTIDVSDTTGDS+ KGCCSS
Sbjct: 236 ALAAKEAAAASVARPSQGTTIDVSDTTGDSHGKGCCSS 273

[Close]

BLAST of Cp4.1LG16g06250 vs. ExPASy TrEMBL
Match: A0A6J1FWB4 (ras-related protein Rab11C-like OS=Cucurbita moschata OX=3662 GN=LOC111448729 PE=4 SV=1)

HSP 1 Score: 420 bits (1079), Expect = 4.16e-148
Identity = 217/218 (99.54%), Postives = 217/218 (99.54%), Query Frame = 0


Query: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT 60
           MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT
Sbjct: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFENVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFENVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFENVQRWLRELRDHADSNIVI 120

Query: 121 VMIGNKSDLSHLRSVSEDDGQSMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180
           VMIGNKSDLSHLRSVSEDDGQSMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK
Sbjct: 121 VMIGNKSDLSHLRSVSEDDGQSMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180

Query: 181 ALAAKEAAAASVARPSQGTTIDVSDTTGDSNRKGCCSS 218
           ALAAKEAAAASVARPSQGTTIDVSDTTGDSNRK CCSS
Sbjct: 181 ALAAKEAAAASVARPSQGTTIDVSDTTGDSNRKSCCSS 218

[Close]

BLAST of Cp4.1LG16g06250 vs. ExPASy TrEMBL
Match: A0A6J1J8Y4 (ras-related protein Rab11C-like OS=Cucurbita maxima OX=3661 GN=LOC111484527 PE=4 SV=1)

HSP 1 Score: 419 bits (1076), Expect = 1.19e-147
Identity = 216/218 (99.08%), Postives = 217/218 (99.54%), Query Frame = 0


Query: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT 60
           MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT
Sbjct: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFENVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFENVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFENVQRWLRELRDHADSNIVI 120

Query: 121 VMIGNKSDLSHLRSVSEDDGQSMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180
           VMIGNKSDLSHLRSVSEDDGQSMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK
Sbjct: 121 VMIGNKSDLSHLRSVSEDDGQSMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180

Query: 181 ALAAKEAAAASVARPSQGTTIDVSDTTGDSNRKGCCSS 218
           ALAAKEAAAASV RPSQGTTIDVSDTTGDS+RKGCCSS
Sbjct: 181 ALAAKEAAAASVTRPSQGTTIDVSDTTGDSDRKGCCSS 218

[Close]

BLAST of Cp4.1LG16g06250 vs. ExPASy TrEMBL
Match: A0A5A7V7L9 (Ras-related protein Rab2BV OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G001070 PE=4 SV=1)

HSP 1 Score: 399 bits (1026), Expect = 4.82e-140
Identity = 206/218 (94.50%), Postives = 213/218 (97.71%), Query Frame = 0


Query: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT 60
           MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFST+TLQVEGKT
Sbjct: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFENVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKR TFENVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVI 120

Query: 121 VMIGNKSDLSHLRSVSEDDGQSMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180
           VMIGNKSDLSHLRSVSEDDGQ+MAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK
Sbjct: 121 VMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180

Query: 181 ALAAKEAAAASVARPSQGTTIDVSDTTGDSNRKGCCSS 218
           ALAA+EAAA S+  P QGTTI+VSDT+GDSNR+GCCSS
Sbjct: 181 ALAAQEAAA-SITHPGQGTTINVSDTSGDSNRRGCCSS 217

[Close]

BLAST of Cp4.1LG16g06250 vs. ExPASy TrEMBL
Match: A0A0A0KE61 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G188120 PE=4 SV=1)

HSP 1 Score: 399 bits (1026), Expect = 4.82e-140
Identity = 206/218 (94.50%), Postives = 213/218 (97.71%), Query Frame = 0


Query: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT 60
           MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFST+TLQVEGKT
Sbjct: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFENVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKR TFENVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVI 120

Query: 121 VMIGNKSDLSHLRSVSEDDGQSMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180
           VMIGNKSDLSHLRSVSEDDGQ+MAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK
Sbjct: 121 VMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180

Query: 181 ALAAKEAAAASVARPSQGTTIDVSDTTGDSNRKGCCSS 218
           ALAA+EAAA S+  P QGTTI+VSDT+GDSNR+GCCSS
Sbjct: 181 ALAAQEAAA-SITHPGQGTTINVSDTSGDSNRRGCCSS 217

[Close]

BLAST of Cp4.1LG16g06250 vs. ExPASy TrEMBL
Match: A0A1S3CKN1 (ras-related protein Rab11C OS=Cucumis melo OX=3656 GN=LOC103502054 PE=4 SV=1)

HSP 1 Score: 399 bits (1026), Expect = 4.82e-140
Identity = 206/218 (94.50%), Postives = 213/218 (97.71%), Query Frame = 0


Query: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT 60
           MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFST+TLQVEGKT
Sbjct: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFENVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKR TFENVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVI 120

Query: 121 VMIGNKSDLSHLRSVSEDDGQSMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180
           VMIGNKSDLSHLRSVSEDDGQ+MAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK
Sbjct: 121 VMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180

Query: 181 ALAAKEAAAASVARPSQGTTIDVSDTTGDSNRKGCCSS 218
           ALAA+EAAA S+  P QGTTI+VSDT+GDSNR+GCCSS
Sbjct: 181 ALAAQEAAA-SITHPGQGTTINVSDTSGDSNRRGCCSS 217

[Close]

BLAST of Cp4.1LG16g06250 vs. TAIR 10
Match: AT3G46830.1 (RAB GTPase homolog A2C )

HSP 1 Score: 362.1 bits (928), Expect = 3.2e-100
Identity = 184/218 (84.40%), Postives = 203/218 (93.12%), Query Frame = 0


Query: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT 60
           M H+VD EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEF+TRT QVEGKT
Sbjct: 1   MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFENVQRWLRELRDHADSNIVI 120
           +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TKR TF+NV RWLRELRDHADSNIVI
Sbjct: 61  IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 VMIGNKSDLSHLRSVSEDDGQSMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180
           +M GNKSDL+HLRSV+E+DGQS+AEKEGLSF+ETSAL+ATN++KAFQTIL EIYHIISKK
Sbjct: 121 MMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKK 180

Query: 181 ALAAKEAAAASVARPSQGTTIDVSDTTGDSNRKGCCSS 219
           ALAA+EAAAA+ A P QGTTI+V DT+G + R  CCSS
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVDDTSGGAKR-ACCSS 217

[Close]

BLAST of Cp4.1LG16g06250 vs. TAIR 10
Match: AT5G59150.1 (RAB GTPase homolog A2D )

HSP 1 Score: 359.0 bits (920), Expect = 2.7e-99
Identity = 179/218 (82.11%), Postives = 206/218 (94.50%), Query Frame = 0


Query: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT 60
           MAH+V+ +YDYLFKIVLIGDSGVGK+NILSRFTRNEFCLESKSTIGVEF+TRTLQVEGKT
Sbjct: 1   MAHRVEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFENVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TKR TF+NV RWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 VMIGNKSDLSHLRSVSEDDGQSMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180
           +M GNK+DL+HLRSV+E+DGQ++AE EGLSF+ETSAL+ATN++KAFQT+L EIYHIISKK
Sbjct: 121 MMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKK 180

Query: 181 ALAAKEAAAASVARPSQGTTIDVSDTTGDSNRKGCCSS 219
           ALAA+EAAAA+ A P QGTTI+V DT+G + ++GCCS+
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVEDTSG-AGKRGCCST 217

[Close]

BLAST of Cp4.1LG16g06250 vs. TAIR 10
Match: AT1G07410.1 (RAB GTPase homolog A2B )

HSP 1 Score: 357.8 bits (917), Expect = 6.0e-99
Identity = 182/218 (83.49%), Postives = 205/218 (94.04%), Query Frame = 0


Query: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT 60
           MA+++DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEF+TRTLQVEGKT
Sbjct: 1   MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFENVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TKR TFENV RWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVI 120

Query: 121 VMIGNKSDLSHLRSVSEDDGQSMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180
           +M GNKSDL+HLRSV+++DG+S+AEKEGLSF+ETSAL+ATNI+KAFQTIL+EIYHIISKK
Sbjct: 121 MMAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKK 180

Query: 181 ALAAKEAAAASVARPSQGTTIDVSDTTGDSNRKGCCSS 219
           ALAA+EAA      P QGT I++SD++  +NRKGCCS+
Sbjct: 181 ALAAQEAAG---NLPGQGTAINISDSSA-TNRKGCCST 214

[Close]

BLAST of Cp4.1LG16g06250 vs. TAIR 10
Match: AT1G09630.1 (RAB GTPase 11C )

HSP 1 Score: 321.6 bits (823), Expect = 4.8e-88
Identity = 162/218 (74.31%), Postives = 191/218 (87.61%), Query Frame = 0


Query: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKT 60
           MA + D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEF+TRTLQVEG+T
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFENVQRWLRELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TFENV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120

Query: 121 VMIGNKSDLSHLRSVSEDDGQSMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180
           ++IGNK+DL HLR+V+ +D QS AEKEGLSFIETSAL+A N++KAFQTIL+E+Y IISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKK 180

Query: 181 ALAAKEAAAASVARPSQGTTIDVSDTTGDSNRKGCCSS 219
           ++++ +  A   A   +G TIDV+ T+  + +K CCSS
Sbjct: 181 SISSDQTTAN--ANIKEGQTIDVAATSESNAKKPCCSS 216

[Close]

BLAST of Cp4.1LG16g06250 vs. TAIR 10
Match: AT5G45750.1 (RAB GTPase homolog A1C )

HSP 1 Score: 286.6 bits (732), Expect = 1.7e-77
Identity = 141/216 (65.28%), Postives = 176/216 (81.48%), Query Frame = 0


Query: 3   HKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLQVEGKTVK 62
           ++ D EYDYLFK+VLIGDSGVGKSN+LSRFT+NEF LESKSTIGVEF+TR+L V+ K +K
Sbjct: 4   YRADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIK 63

Query: 63  AQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFENVQRWLRELRDHADSNIVIVM 122
           AQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+  TFENV+ WL+ELR+H D NIV+++
Sbjct: 64  AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVML 123

Query: 123 IGNKSDLSHLRSVSEDDGQSMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKKAL 182
           +GNKSDL HL +V  +D +S AEKE L F+ETSAL+ATN++ AF  +LT+I+HI+SKKA+
Sbjct: 124 VGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSKKAM 183

Query: 183 AAKEAAAASVARPSQGTTIDVSDTTGDSNRKGCCSS 219
              EAA+ S   PS+G  ID+        + GCCS+
Sbjct: 184 ---EAASESANVPSKGDKIDIGKDVSAVKKGGCCSN 216

The following BLAST results are available for this feature:

BLAST of Cp4.1LG16g06250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q40193	2.4e-100	84.86	Ras-related protein Rab11C OS=Lotus japonicus OX=34305 GN=RAB11C PE=2 SV=1	[more]
Q96283	4.5e-99	84.40	Ras-related protein RABA2c OS=Arabidopsis thaliana OX=3702 GN=RABA2C PE=2 SV=4	[more]
Q9FIF9	3.8e-98	82.11	Ras-related protein RABA2d OS=Arabidopsis thaliana OX=3702 GN=RABA2D PE=2 SV=1	[more]
Q9LNW1	8.5e-98	83.49	Ras-related protein RABA2b OS=Arabidopsis thaliana OX=3702 GN=RABA2B PE=2 SV=2	[more]
Q39434	7.2e-97	83.49	Ras-related protein Rab2BV OS=Beta vulgaris OX=161934 GN=RAB2BV PE=2 SV=1	[more]

BLAST of Cp4.1LG16g06250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023512123.1	1.05e-148	100.00	ras-related protein Rab11C-like [Cucurbita pepo subsp. pepo]	[more]
KAG7010528.1	6.05e-148	99.54	Ras-related protein Rab11C, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022944214.1	8.60e-148	99.54	ras-related protein Rab11C-like [Cucurbita moschata]	[more]
XP_022986937.1	2.46e-147	99.08	ras-related protein Rab11C-like [Cucurbita maxima]	[more]
KAG6570681.1	5.09e-146	99.08	Ras-related protein Rab11C, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Cp4.1LG16g06250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FWB4	4.16e-148	99.54	ras-related protein Rab11C-like OS=Cucurbita moschata OX=3662 GN=LOC111448729 PE...	[more]
A0A6J1J8Y4	1.19e-147	99.08	ras-related protein Rab11C-like OS=Cucurbita maxima OX=3661 GN=LOC111484527 PE=4...	[more]
A0A5A7V7L9	4.82e-140	94.50	Ras-related protein Rab2BV OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A0A0KE61	4.82e-140	94.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G188120 PE=4 SV=1	[more]
A0A1S3CKN1	4.82e-140	94.50	ras-related protein Rab11C OS=Cucumis melo OX=3656 GN=LOC103502054 PE=4 SV=1	[more]

BLAST of Cp4.1LG16g06250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46830.1	3.2e-100	84.40	RAB GTPase homolog A2C	[more]
AT5G59150.1	2.7e-99	82.11	RAB GTPase homolog A2D	[more]
AT1G07410.1	6.0e-99	83.49	RAB GTPase homolog A2B	[more]
AT1G09630.1	4.8e-88	74.31	RAB GTPase 11C	[more]
AT5G45750.1	1.7e-77	65.28	RAB GTPase homolog A1C	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 116..129 score: 46.24 coord: 36..52 score: 36.12 coord: 54..76 score: 53.54 coord: 13..34 score: 52.05 coord: 151..173 score: 39.51
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 18..215 e-value: 3.0E-9 score: 46.7
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 13..176 e-value: 1.2E-111 score: 386.9
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 10..176 e-value: 3.1E-28 score: 109.8
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 1..185 e-value: 0.004 score: 0.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 194..218
None	No IPR available	PANTHER	PTHR47978:SF28	RAS-RELATED PROTEIN RGP2	coord: 1..217
None	No IPR available	PANTHER	PTHR47978	FAMILY NOT NAMED	coord: 1..217
None	No IPR available	PROSITE	PS51420	RHO	coord: 6..188 score: 9.749252
None	No IPR available	PROSITE	PS51419	RAB	coord: 8..216 score: 36.124542
None	No IPR available	CDD	cd01868	Rab11_like	coord: 10..174 e-value: 1.27596E-127 score: 354.944
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 15..172 e-value: 8.0E-12 score: 31.7
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 14..174 e-value: 7.3E-61 score: 204.5
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 1..193 score: 17.071051
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 5..216 e-value: 6.6E-74 score: 249.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 8..179
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 11..170 e-value: 2.6E-40 score: 135.8

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG16g06250.1	Cp4.1LG16g06250.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0005768	endosome
cellular_component	GO:0005794	Golgi apparatus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0004672	protein kinase activity