Cp4.1LG16g04760 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG16g04760
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	B-like cyclin
Location	Cp4.1LG16: 5850612 .. 5852528 (-)
RNA-Seq Expression	Cp4.1LG16g04760
Synteny	Cp4.1LG16g04760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTGAAGTCTCCTCTTAACTTCTTTTAAGAAACAGCGAAACCTCTGCTTTTTCCCATCATCACTTCCTCTTCTTCTTCTTCTTTAAACCATGCCTTCCCTCTTCCACCACCACTCTCTCTCCCATTCAACATCTTCCCTTCTCTCCCTCTCCATGGACTTCGATCTCGAAAACCCATTCACCCATCTCCACCACCCTCACTCCTCCGACGCCGCCACTCTCTTCCTCATCGAGTCCGATCACATGCTCTCTCCAACCTACCTCCACACCCTTCATTCTTCTCCTTCCGATTCCTCTGTTCGACAGGACACCATTTCTTTAATCTCTCAGGTAACCCATTTCTTCTTCTCTTCTTTAATTCCTTCAAATGGGCTTCTTTCCCCTGATTCTCTCTCTCATTTGCAGTGCTGTTGTAGCTGTAACATCGATCCACACTTGTCGTACCTTGCCGTCAATTACCTCGATCGCTTCTTCTCCTTTCAGGGAGTGCCGGTAATGTCTTTTCACTGAAACTAAAACAGAGCGTTCGTTCTTCCCCTGTTTCCCCTGTTTTGAAAATTGTTGTTCGTTATTTACAGCAACCAAAGCCATGGGTCTTGAGGCTTCTTGCCGTCTCTTGTGTTTCTCTCGCTGCCAAAATGAAGCAAACAGAGCACAATCTCTTCGATTTTCAGGTATTATTGAACAAGTAGGCAATACCCAAATGGCAAATCCAGAGCTGACTCTGTTTTTTTTTTGAAACAGGGGAATGAAGGCTTCATCTTTGATCCCCAAACAGTACACAGAATGGAATCTCTCATCTTGGGAGCTCTTAAATGGAGAATGCGCTCCATCACTCCCTTCTCCTTCGTCCCTTTCTTCATTTCCCTCTTCAAACTCAGAGACCCACCATTGTTGCAAGCTCTCAAAGCCAGAGCTACAGAGATCATCTTCATAGCTCAAAATGGTAATGAATTAAAAATCTAAAAAAGGAACTTTTTTTCTTCACATTCTTGCTGCATCAATCAACAGACATTGCGTTTGCTTCTTTGTTCGTAGGGATTGAGCTTTTGGAGTTCAAGGCATCAGTAATTGCAGCCTCTGCTCTGCTCTCCGCCGCACACGAGCTCTTCCCAATCCAATATCCTTGCTTCAGAAAAGCAATTCTCAACTGTTCATACGTTAATAAAGTAAATACCCCACTTTCCTCTTTTATGTTAAAATTCATTAAAACAGAGAGACAGAGAGAGAGAGAGGAGAATGCAATAAATGCAATCTTAAATTAGAGAAATATATAATTGGGAGATTGTGATTAAAAAGGACTGCGGGTGGTGCAGGAGGAGGAAGAGGAAATATTGGGGAGATGCTTCAAGGCAGTGCAGGAGATAGTAATAAATGGGTACGAAAGAGGAGGATTGGATAGAGAACAGAGGTCGGACACGGCGGCCAATGTACTGGACCACCATTTCTCGAGCTCTGAGAGTGAAAACACCTTCATGGGCACATCCTCCTCCGCCGCCGCCGTGACGAACAGAGCAGATAAGGATGGGAAGAAGAGAAAGGTGGGTGTTAGGCAGAGCAAGAATGAGAGGTGTATACAGCACTGTTGATGAGACGACGATGAGGATGGCAATGGCAGAATAGTTTTGGTTTGTTTGGTTTGGTATTGTATGTATGTAATGTAATGTAATGTGTAGAAGTATGGGGCAATCGGGGAAAAGAAGGAATTTGTGTTCCTTTTTTGTTGGGTTTCTTGGGACCAAAGAAAGACAAAACATAGCTTTGAAGTAGTGAGGCCGTTGTGGTGGTTGTGGTGGTGGTGGTGGTCGGACGTTGGATTTGTGTTTTGGGTTTTAGTGTGGTTTCTGTCGCTTAGTTTTCTAGCACAGATTAACTCTATACTTTATATACCTAATTCAATAATTTCTTGTGCTTTCT

mRNA sequence

CATTGAAGTCTCCTCTTAACTTCTTTTAAGAAACAGCGAAACCTCTGCTTTTTCCCATCATCACTTCCTCTTCTTCTTCTTCTTTAAACCATGCCTTCCCTCTTCCACCACCACTCTCTCTCCCATTCAACATCTTCCCTTCTCTCCCTCTCCATGGACTTCGATCTCGAAAACCCATTCACCCATCTCCACCACCCTCACTCCTCCGACGCCGCCACTCTCTTCCTCATCGAGTCCGATCACATGCTCTCTCCAACCTACCTCCACACCCTTCATTCTTCTCCTTCCGATTCCTCTGTTCGACAGGACACCATTTCTTTAATCTCTCAGTGCTGTTGTAGCTGTAACATCGATCCACACTTGTCGTACCTTGCCGTCAATTACCTCGATCGCTTCTTCTCCTTTCAGGGAGTGCCGCAACCAAAGCCATGGGTCTTGAGGCTTCTTGCCGTCTCTTGTGTTTCTCTCGCTGCCAAAATGAAGCAAACAGAGCACAATCTCTTCGATTTTCAGGGGAATGAAGGCTTCATCTTTGATCCCCAAACAGTACACAGAATGGAATCTCTCATCTTGGGAGCTCTTAAATGGAGAATGCGCTCCATCACTCCCTTCTCCTTCGTCCCTTTCTTCATTTCCCTCTTCAAACTCAGAGACCCACCATTGTTGCAAGCTCTCAAAGCCAGAGCTACAGAGATCATCTTCATAGCTCAAAATGGGATTGAGCTTTTGGAGTTCAAGGCATCAGAGGAGGAAGAGGAAATATTGGGGAGATGCTTCAAGGCAGTGCAGGAGATAGTAATAAATGGGTACGAAAGAGGAGGATTGGATAGAGAACAGAGGTCGGACACGGCGGCCAATGTACTGGACCACCATTTCTCGAGCTCTGAGAGTGAAAACACCTTCATGGGCACATCCTCCTCCGCCGCCGCCGTGACGAACAGAGCAGATAAGGATGGGAAGAAGAGAAAGGTGGGTGTTAGGCAGAGCAAGAATGAGAGGTGTATACAGCACTGTTGATGAGACGACGATGAGGATGGCAATGGCAGAATAGTTTTGGTTTGTTTGGTTTGGTATTGTATGTATGTAATGTAATGTAATGTGTAGAAGTATGGGGCAATCGGGGAAAAGAAGGAATTTGTGTTCCTTTTTTGTTGGGTTTCTTGGGACCAAAGAAAGACAAAACATAGCTTTGAAGTAGTGAGGCCGTTGTGGTGGTTGTGGTGGTGGTGGTGGTCGGACGTTGGATTTGTGTTTTGGGTTTTAGTGTGGTTTCTGTCGCTTAGTTTTCTAGCACAGATTAACTCTATACTTTATATACCTAATTCAATAATTTCTTGTGCTTTCT

Coding sequence (CDS)

ATGCCTTCCCTCTTCCACCACCACTCTCTCTCCCATTCAACATCTTCCCTTCTCTCCCTCTCCATGGACTTCGATCTCGAAAACCCATTCACCCATCTCCACCACCCTCACTCCTCCGACGCCGCCACTCTCTTCCTCATCGAGTCCGATCACATGCTCTCTCCAACCTACCTCCACACCCTTCATTCTTCTCCTTCCGATTCCTCTGTTCGACAGGACACCATTTCTTTAATCTCTCAGTGCTGTTGTAGCTGTAACATCGATCCACACTTGTCGTACCTTGCCGTCAATTACCTCGATCGCTTCTTCTCCTTTCAGGGAGTGCCGCAACCAAAGCCATGGGTCTTGAGGCTTCTTGCCGTCTCTTGTGTTTCTCTCGCTGCCAAAATGAAGCAAACAGAGCACAATCTCTTCGATTTTCAGGGGAATGAAGGCTTCATCTTTGATCCCCAAACAGTACACAGAATGGAATCTCTCATCTTGGGAGCTCTTAAATGGAGAATGCGCTCCATCACTCCCTTCTCCTTCGTCCCTTTCTTCATTTCCCTCTTCAAACTCAGAGACCCACCATTGTTGCAAGCTCTCAAAGCCAGAGCTACAGAGATCATCTTCATAGCTCAAAATGGGATTGAGCTTTTGGAGTTCAAGGCATCAGAGGAGGAAGAGGAAATATTGGGGAGATGCTTCAAGGCAGTGCAGGAGATAGTAATAAATGGGTACGAAAGAGGAGGATTGGATAGAGAACAGAGGTCGGACACGGCGGCCAATGTACTGGACCACCATTTCTCGAGCTCTGAGAGTGAAAACACCTTCATGGGCACATCCTCCTCCGCCGCCGCCGTGACGAACAGAGCAGATAAGGATGGGAAGAAGAGAAAGGTGGGTGTTAGGCAGAGCAAGAATGAGAGGTGTATACAGCACTGTTGA

Protein sequence

MPSLFHHHSLSHSTSSLLSLSMDFDLENPFTHLHHPHSSDAATLFLIESDHMLSPTYLHTLHSSPSDSSVRQDTISLISQCCCSCNIDPHLSYLAVNYLDRFFSFQGVPQPKPWVLRLLAVSCVSLAAKMKQTEHNLFDFQGNEGFIFDPQTVHRMESLILGALKWRMRSITPFSFVPFFISLFKLRDPPLLQALKARATEIIFIAQNGIELLEFKASEEEEEILGRCFKAVQEIVINGYERGGLDREQRSDTAANVLDHHFSSSESENTFMGTSSSAAAVTNRADKDGKKRKVGVRQSKNERCIQHC

Homology

[Close]

BLAST of Cp4.1LG16g04760 vs. ExPASy Swiss-Prot
Match: Q9ZR04 (Putative cyclin-D6-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD6-1 PE=3 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 2.8e-46
Identity = 128/320 (40.00%), Postives = 182/320 (56.88%), Query Frame = 0


Query: 22  MDFDLENPFTH--LHHPHSSDA------ATLFLIESDHMLSPTYLHTLHSSPSDSSVRQD 81
           M+F LE+P +H  LH+  + D        +LFL+E  HM S  Y H+L SS    S R  
Sbjct: 1   MEFHLEHPLSHSSLHNNFNDDTDYETLPHSLFLVEFQHMPSSHYFHSLKSSAFLLSNRNQ 60

Query: 82  TISLISQCCCSCNIDPHLSYLAVNYLDRFFSFQGVPQPKPWVLRLLAVSCVSLAAKMKQT 141
            IS I+Q     + DP L+YLAVNYLDRF S + +PQ KPW+L+L+++SCVSL+AKM++ 
Sbjct: 61  AISSITQYSRKFD-DPSLTYLAVNYLDRFLSSEDMPQSKPWILKLISLSCVSLSAKMRKP 120

Query: 142 EHNLFDFQGNEGFIFDPQTVHRMESLILGALKWRMRSITPFSFVPFFISLFKLR--DPPL 201
           + ++ D    EG  FD Q + RME++ILGALKWRMRS+TPFSF+ FFISLF+L+  DP L
Sbjct: 121 DMSVSDLP-VEGEFFDAQMIERMENVILGALKWRMRSVTPFSFLAFFISLFELKEEDPLL 180

Query: 202 LQ-ALKARATEIIFIAQNGIELLEFKAS------------------------------EE 261
           L+ +LK++ +++ F  Q+ I  LEFK S                                
Sbjct: 181 LKHSLKSQTSDLTFSLQHDISFLEFKPSVIAGAALLFASFELCPLQFPCFSNRINQCTYV 240

Query: 262 EEEILGRCFKAVQE--IVINGYERGGLDREQRSDTAANVLDHHFSSSESENTFMGTSSSA 299
            ++ L  C+KA+QE  I++        + E  ++TA NVLD  FSS ES+ +   T+SS+
Sbjct: 241 NKDELMECYKAIQERDIIVG-------ENEGSTETAVNVLDQQFSSCESDKSITITASSS 300

[Close]

BLAST of Cp4.1LG16g04760 vs. ExPASy Swiss-Prot
Match: Q8LGA1 (Cyclin-D4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD4-1 PE=1 SV=2)

HSP 1 Score: 124.8 bits (312), Expect = 1.7e-27
Identity = 71/175 (40.57%), Postives = 105/175 (60.00%), Query Frame = 0


Query: 48  ESDHMLSPTYLHTLHSSPSDSSV-RQDTISLISQCCCSCNIDPHLSYLAVNYLDRFFSFQ 107
           E  H+ S  Y+  L S   D +V R+D ++ I + C      P    LA+NYLDRF S  
Sbjct: 54  EKQHLPSDDYIKRLRSGDLDLNVGRRDALNWIWKACEVHQFGPLCFCLAMNYLDRFLSVH 113

Query: 108 GVPQPKPWVLRLLAVSCVSLAAKMKQTE-HNLFDFQ-GNEGFIFDPQTVHRMESLILGAL 167
            +P  K W+L+LLAV+C+SLAAK+++TE   L D Q G+  F+F+ ++V RME L+L  L
Sbjct: 114 DLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDLQVGDPQFVFEAKSVQRMELLVLNKL 173

Query: 168 KWRMRSITPFSFVPFFISLFKLRDPPLLQALKARATEIIFIAQNGIELLEFKASE 220
           KWR+R+ITP S++ +F+      D      L +R+ ++I     GI+ LEF+ SE
Sbjct: 174 KWRLRAITPCSYIRYFLRKMSKCDQEPSNTLISRSLQVIASTTKGIDFLEFRPSE 228

[Close]

BLAST of Cp4.1LG16g04760 vs. ExPASy Swiss-Prot
Match: Q69S43 (Cyclin-D6-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD6-1 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 6.5e-27
Identity = 102/308 (33.12%), Postives = 154/308 (50.00%), Query Frame = 0


Query: 23  DFDLENPFTHLHHPHSSDAATLFLIESDHMLSPTYLHTLHSSPSDSSVRQDTISLISQCC 82
           +FDLENPFT    P     A+L   E  H  SP+       S + S+ R++    IS+  
Sbjct: 19  EFDLENPFT---SPADEPIASLLDAEGHH--SPSV------SAAASAARREAAGFISKVR 78

Query: 83  CSCNID--PHLSYLAVNYLDRFFSFQGVP-QPKPWVLRLLAVSCVSLAAKMKQTEH-NLF 142
               +D  P ++YLA+NY+DR+ S + +  +  PW  RLLA+SC++LAAKM++    +  
Sbjct: 79  YDGELDVHPRVAYLALNYVDRYLSKRQLACERNPWAPRLLAISCLTLAAKMQRAAAISAA 138

Query: 143 DFQGNEGFIFDPQTVHRMESLILGALKWRMRSITPFSFVPFFISLF--KLRDPPLLQALK 202
           D Q  E F+FD   + RME ++L AL+WR RS+TP +F+ FF+S    + R P LL A+K
Sbjct: 139 DIQRGEEFMFDEAKIQRMEQMVLNALEWRTRSVTPLAFLGFFLSACFPQPRHPALLDAIK 198

Query: 203 ARATEIIFIAQNGIELLEFKASEEEEEILGRCFKAVQEIVINGYERG-----GLDREQ-- 262
           ARA +++   Q  +++ EF  S      L      V    + G+E G      ++ E+  
Sbjct: 199 ARAVDLLLRVQPEVKMAEFSPSVAAAAALLAAAGEVAGAHLLGFEAGVAACPFVNSEKLR 258

Query: 263 ---------------------RSDTAANVLDHHFS-SSESENTFMGTSSSAAAVTNRADK 296
                                 ++T   VL HH S SSESE T     ++  +  N A  
Sbjct: 259 ECGEVMAAACGVGPSWAAAATSAETPVTVLGHHRSASSESERT-----TTVGSAANSA-- 308

[Close]

BLAST of Cp4.1LG16g04760 vs. ExPASy Swiss-Prot
Match: Q6YXH8 (Cyclin-D4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD4-1 PE=2 SV=2)

HSP 1 Score: 122.5 bits (306), Expect = 8.5e-27
Identity = 74/190 (38.95%), Postives = 105/190 (55.26%), Query Frame = 0


Query: 36  PHSSDAATLFLIESDHMLSPTYLHTLHSSPSDSS----VRQDTISLISQCCCSCNIDPHL 95
           P     A L   E+DHM    Y   L +   D      VR D I  I +     +  P  
Sbjct: 64  PSEECVARLVETEADHMPREDYAERLRAGGGDGDLDLRVRMDAIDWIWKVHSYYSFAPLT 123

Query: 96  SYLAVNYLDRFFSFQGVPQPKPWVLRLLAVSCVSLAAKMKQTE-HNLFDFQ-GNEGFIFD 155
           + LAVNYLDRF S   +P  K W+ +LLAV+C+SLAAKM++T+     D Q G E ++F+
Sbjct: 124 ACLAVNYLDRFLSLYQLPDGKDWMTQLLAVACLSLAAKMEETDVPQSLDLQVGEERYVFE 183

Query: 156 PQTVHRMESLILGALKWRMRSITPFSFVPFFISLFKLRDPPLLQALKARATEIIFIAQNG 215
            +T+ RME L+L  LKWRM+++TPFS+V +F+      DPP  ++    ++E+I     G
Sbjct: 184 AKTIQRMELLVLSTLKWRMQAVTPFSYVDYFLRELNGGDPPSGRS-ALLSSELILCIARG 243

Query: 216 IELLEFKASE 220
            E L F+ SE
Sbjct: 244 TECLGFRPSE 252

[Close]

BLAST of Cp4.1LG16g04760 vs. ExPASy Swiss-Prot
Match: Q0WQN9 (Cyclin-D4-2 OS=Arabidopsis thaliana OX=3702 GN=CYCD4-2 PE=1 SV=2)

HSP 1 Score: 119.8 bits (299), Expect = 5.5e-26
Identity = 71/188 (37.77%), Postives = 104/188 (55.32%), Query Frame = 0


Query: 36  PHSSDAATLFLIESDHMLSP--TYLHTLHSSPSDSSVRQDTISLISQCCCSCNIDPHLSY 95
           P  S+     +IE +   SP   YL  L +   D +VR   +  I + C      P    
Sbjct: 32  PLESEEIVREMIEKERQHSPRDDYLKRLRNGDLDFNVRIQALGWIWKACEELQFGPLCIC 91

Query: 96  LAVNYLDRFFSFQGVPQPKPWVLRLLAVSCVSLAAKMKQTE-HNLFDFQ-GNEGFIFDPQ 155
           LA+NYLDRF S   +P  K W ++LLAV+C+SLAAK+++T    L   Q G   F+F+ +
Sbjct: 92  LAMNYLDRFLSVHDLPSGKAWTVQLLAVACLSLAAKIEETNVPELMQLQVGAPMFVFEAK 151

Query: 156 TVHRMESLILGALKWRMRSITPFSFVPFFISLFKLRDPPLLQALKARATEIIFIAQNGIE 215
           +V RME L+L  L+WR+R++TP S+V +F+S     D      L  R+ ++I     GI+
Sbjct: 152 SVQRMELLVLNVLRWRLRAVTPCSYVRYFLSKINGYDQEPHSRLVTRSLQVIASTTKGID 211

Query: 216 LLEFKASE 220
            LEF+ASE
Sbjct: 212 FLEFRASE 219

[Close]

BLAST of Cp4.1LG16g04760 vs. NCBI nr
Match: XP_023512860.1 (putative cyclin-D6-1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 595 bits (1535), Expect = 9.60e-214
Identity = 308/342 (90.06%), Postives = 308/342 (90.06%), Query Frame = 0


Query: 1   MPSLFHHHSLSHSTSSLLSLSMDFDLENPFTHLHHPHSSDAATLFLIESDHMLSPTYLHT 60
           MPSLFHHHSLSHSTSSLLSLSMDFDLENPFTHLHHPHSSDAATLFLIESDHMLSPTYLHT
Sbjct: 1   MPSLFHHHSLSHSTSSLLSLSMDFDLENPFTHLHHPHSSDAATLFLIESDHMLSPTYLHT 60

Query: 61  LHSSPSDSSVRQDTISLISQCCCSCNIDPHLSYLAVNYLDRFFSFQGVPQPKPWVLRLLA 120
           LHSSPSDSSVRQDTISLISQCCCSCNIDPHLSYLAVNYLDRFFSFQGVPQPKPWVLRLLA
Sbjct: 61  LHSSPSDSSVRQDTISLISQCCCSCNIDPHLSYLAVNYLDRFFSFQGVPQPKPWVLRLLA 120

Query: 121 VSCVSLAAKMKQTEHNLFDFQGNEGFIFDPQTVHRMESLILGALKWRMRSITPFSFVPFF 180
           VSCVSLAAKMKQTEHNLFDFQGNEGFIFDPQTVHRMESLILGALKWRMRSITPFSFVPFF
Sbjct: 121 VSCVSLAAKMKQTEHNLFDFQGNEGFIFDPQTVHRMESLILGALKWRMRSITPFSFVPFF 180

Query: 181 ISLFKLRDPPLLQALKARATEIIFIAQNGIELLEFKAS---------------------- 240
           ISLFKLRDPPLLQALKARATEIIFIAQNGIELLEFKAS                      
Sbjct: 181 ISLFKLRDPPLLQALKARATEIIFIAQNGIELLEFKASVIAASALLSAAHELFPIQYPCF 240

Query: 241 ------------EEEEEILGRCFKAVQEIVINGYERGGLDREQRSDTAANVLDHHFSSSE 300
                       EEEEEILGRCFKAVQEIVINGYERGGLDREQRSDTAANVLDHHFSSSE
Sbjct: 241 RKAILNCSYVNKEEEEEILGRCFKAVQEIVINGYERGGLDREQRSDTAANVLDHHFSSSE 300

Query: 301 SENTFMGTSSSAAAVTNRADKDGKKRKVGVRQSKNERCIQHC 308
           SENTFMGTSSSAAAVTNRADKDGKKRKVGVRQSKNERCIQHC
Sbjct: 301 SENTFMGTSSSAAAVTNRADKDGKKRKVGVRQSKNERCIQHC 342

[Close]

BLAST of Cp4.1LG16g04760 vs. NCBI nr
Match: XP_022944609.1 (putative cyclin-D6-1 [Cucurbita moschata])

HSP 1 Score: 585 bits (1509), Expect = 8.80e-210
Identity = 302/342 (88.30%), Postives = 306/342 (89.47%), Query Frame = 0


Query: 1   MPSLFHHHSLSHSTSSLLSLSMDFDLENPFTHLHHPHSSDAATLFLIESDHMLSPTYLHT 60
           MPSLFHHHSLSHSTSSLLSLSMDFDLENPFTHLHHPHSSDAATLFLIESDHMLSPTYLHT
Sbjct: 1   MPSLFHHHSLSHSTSSLLSLSMDFDLENPFTHLHHPHSSDAATLFLIESDHMLSPTYLHT 60

Query: 61  LHSSPSDSSVRQDTISLISQCCCSCNIDPHLSYLAVNYLDRFFSFQGVPQPKPWVLRLLA 120
           LHSSP+DSSVR+DTISLISQCCCSCNIDPHLSYLAVNYLDRFFSFQGVPQPKPWVLRLLA
Sbjct: 61  LHSSPTDSSVRRDTISLISQCCCSCNIDPHLSYLAVNYLDRFFSFQGVPQPKPWVLRLLA 120

Query: 121 VSCVSLAAKMKQTEHNLFDFQGNEGFIFDPQTVHRMESLILGALKWRMRSITPFSFVPFF 180
           VSCVSLAAKMKQTEHNLFDFQGNEGFIFDPQTVHRMESLILGALKWRMRSITPFSFVPFF
Sbjct: 121 VSCVSLAAKMKQTEHNLFDFQGNEGFIFDPQTVHRMESLILGALKWRMRSITPFSFVPFF 180

Query: 181 ISLFKLRDPPLLQALKARATEIIFIAQNGIELLEFKAS---------------------- 240
           ISLFKLRDPPLLQALKARATEIIFIAQNGIELLEFK S                      
Sbjct: 181 ISLFKLRDPPLLQALKARATEIIFIAQNGIELLEFKPSVIAASALLSAAHELFPIQYPCF 240

Query: 241 ------------EEEEEILGRCFKAVQEIVINGYERGGLDREQRSDTAANVLDHHFSSSE 300
                       EEEEE+LGRCFKAVQEIVINGYERGGLD EQRSDTAANVLDHHFSSSE
Sbjct: 241 RKAILNCSYVNKEEEEEMLGRCFKAVQEIVINGYERGGLDIEQRSDTAANVLDHHFSSSE 300

Query: 301 SENTFMGTSSSAAAVTNRADKDGKKRKVGVRQSKNERCIQHC 308
           SENTFMGTSSSA+AVTNRADKDGKKRKVGVRQSKNERCIQHC
Sbjct: 301 SENTFMGTSSSASAVTNRADKDGKKRKVGVRQSKNERCIQHC 342

[Close]

BLAST of Cp4.1LG16g04760 vs. NCBI nr
Match: KAG6570855.1 (putative cyclin-D6-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 584 bits (1506), Expect = 2.52e-209
Identity = 301/342 (88.01%), Postives = 306/342 (89.47%), Query Frame = 0


Query: 1   MPSLFHHHSLSHSTSSLLSLSMDFDLENPFTHLHHPHSSDAATLFLIESDHMLSPTYLHT 60
           MPSLFHHHSLSHSTSSLLSLSMDFDLENPFTHLHHPHSSDAATLFLIESDHMLSPTYLHT
Sbjct: 1   MPSLFHHHSLSHSTSSLLSLSMDFDLENPFTHLHHPHSSDAATLFLIESDHMLSPTYLHT 60

Query: 61  LHSSPSDSSVRQDTISLISQCCCSCNIDPHLSYLAVNYLDRFFSFQGVPQPKPWVLRLLA 120
           LHSSP+DSSVR+DTISLISQCCCSCNIDPHLSYLAVNYLDRFFSFQGVPQPKPWVLRLLA
Sbjct: 61  LHSSPTDSSVRRDTISLISQCCCSCNIDPHLSYLAVNYLDRFFSFQGVPQPKPWVLRLLA 120

Query: 121 VSCVSLAAKMKQTEHNLFDFQGNEGFIFDPQTVHRMESLILGALKWRMRSITPFSFVPFF 180
           VSCVSLAAKMKQTEHNLFDFQGNEGFIFDPQTVHRMESLILGALKWRMRSITPFSFVPFF
Sbjct: 121 VSCVSLAAKMKQTEHNLFDFQGNEGFIFDPQTVHRMESLILGALKWRMRSITPFSFVPFF 180

Query: 181 ISLFKLRDPPLLQALKARATEIIFIAQNGIELLEFKAS---------------------- 240
           ISLFKLRDPPLLQALKARATEIIFIAQNGIELLEFK S                      
Sbjct: 181 ISLFKLRDPPLLQALKARATEIIFIAQNGIELLEFKPSVIAASALLSAAHELFPIQYPCF 240

Query: 241 ------------EEEEEILGRCFKAVQEIVINGYERGGLDREQRSDTAANVLDHHFSSSE 300
                       EEEEE+LGRCFKAVQE+VINGYERGGLD EQRSDTAANVLDHHFSSSE
Sbjct: 241 RKAILNCSYVNKEEEEEMLGRCFKAVQEMVINGYERGGLDIEQRSDTAANVLDHHFSSSE 300

Query: 301 SENTFMGTSSSAAAVTNRADKDGKKRKVGVRQSKNERCIQHC 308
           SENTFMGTSSSA+AVTNRADKDGKKRKVGVRQSKNERCIQHC
Sbjct: 301 SENTFMGTSSSASAVTNRADKDGKKRKVGVRQSKNERCIQHC 342

[Close]

BLAST of Cp4.1LG16g04760 vs. NCBI nr
Match: KAG7010705.1 (putative cyclin-D6-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 580 bits (1495), Expect = 1.20e-207
Identity = 301/342 (88.01%), Postives = 304/342 (88.89%), Query Frame = 0


Query: 1   MPSLFHHHSLSHSTSSLLSLSMDFDLENPFTHLHHPHSSDAATLFLIESDHMLSPTYLHT 60
           MPSLFHHHSLSHSTSSLLSLSMDFDLENPFTHL  PHSSDAATLFLIESDHMLSPTYLHT
Sbjct: 1   MPSLFHHHSLSHSTSSLLSLSMDFDLENPFTHLQDPHSSDAATLFLIESDHMLSPTYLHT 60

Query: 61  LHSSPSDSSVRQDTISLISQCCCSCNIDPHLSYLAVNYLDRFFSFQGVPQPKPWVLRLLA 120
           LHSSPSDSSVR+DTISLISQCCCSCNIDPHLSYLAVNYLDRFFSFQGVPQPKPWVLRLLA
Sbjct: 61  LHSSPSDSSVRRDTISLISQCCCSCNIDPHLSYLAVNYLDRFFSFQGVPQPKPWVLRLLA 120

Query: 121 VSCVSLAAKMKQTEHNLFDFQGNEGFIFDPQTVHRMESLILGALKWRMRSITPFSFVPFF 180
           VSCVSLAAKMKQTEHNLFDFQGNEGFIFDPQTVHRMESLILGALKWRMRSITPFSFVPFF
Sbjct: 121 VSCVSLAAKMKQTEHNLFDFQGNEGFIFDPQTVHRMESLILGALKWRMRSITPFSFVPFF 180

Query: 181 ISLFKLRDPPLLQALKARATEIIFIAQNGIELLEFKAS---------------------- 240
           ISLFKLRDPPLLQALKARATEIIFIAQNGIELLEFK S                      
Sbjct: 181 ISLFKLRDPPLLQALKARATEIIFIAQNGIELLEFKPSVIAASALLSAAHELFPIQYPCF 240

Query: 241 ------------EEEEEILGRCFKAVQEIVINGYERGGLDREQRSDTAANVLDHHFSSSE 300
                       EEEEE+LGRCFKAVQEIVINGYERGGLD EQRSDTAANVLDHHFSSSE
Sbjct: 241 RKAILNCSYVNKEEEEEMLGRCFKAVQEIVINGYERGGLDIEQRSDTAANVLDHHFSSSE 300

Query: 301 SENTFMGTSSSAAAVTNRADKDGKKRKVGVRQSKNERCIQHC 308
           SENTFMGTSSSA+AVTNRADKDGKKRKVGVRQSKNERCIQHC
Sbjct: 301 SENTFMGTSSSASAVTNRADKDGKKRKVGVRQSKNERCIQHC 342

[Close]

BLAST of Cp4.1LG16g04760 vs. NCBI nr
Match: XP_022986331.1 (putative cyclin-D6-1 [Cucurbita maxima])

HSP 1 Score: 568 bits (1464), Expect = 6.32e-203
Identity = 294/342 (85.96%), Postives = 301/342 (88.01%), Query Frame = 0


Query: 1   MPSLFHHHSLSHSTSSLLSLSMDFDLENPFTHLHHPHSSDAATLFLIESDHMLSPTYLHT 60
           MPSLF+HHSLSHSTSSLLSLSMDFDLENP THLH PHSSDAATLFLIESDHMLSPTYLHT
Sbjct: 1   MPSLFYHHSLSHSTSSLLSLSMDFDLENPLTHLHDPHSSDAATLFLIESDHMLSPTYLHT 60

Query: 61  LHSSPSDSSVRQDTISLISQCCCSCNIDPHLSYLAVNYLDRFFSFQGVPQPKPWVLRLLA 120
           LHS+PSDSSVR+DTIS ISQCCCSCNIDPHLSYLAVNYLDRFFSFQGVPQPKPWVLRLLA
Sbjct: 61  LHSTPSDSSVRRDTISFISQCCCSCNIDPHLSYLAVNYLDRFFSFQGVPQPKPWVLRLLA 120

Query: 121 VSCVSLAAKMKQTEHNLFDFQGNEGFIFDPQTVHRMESLILGALKWRMRSITPFSFVPFF 180
           VSCVSLAAKMKQTEHNLFDFQGNE FIFDPQTVHRMESLILGALKWRMRSITPFSFVPFF
Sbjct: 121 VSCVSLAAKMKQTEHNLFDFQGNECFIFDPQTVHRMESLILGALKWRMRSITPFSFVPFF 180

Query: 181 ISLFKLRDPPLLQALKARATEIIFIAQNGIELLEFKAS---------------------- 240
           ISLF+LRDPPLLQALK RATEIIFI+QNGIELLEFK S                      
Sbjct: 181 ISLFELRDPPLLQALKGRATEIIFISQNGIELLEFKPSVIAASALLSAAHELFPIQYPCF 240

Query: 241 ------------EEEEEILGRCFKAVQEIVINGYERGGLDREQRSDTAANVLDHHFSSSE 300
                       EEEEE+LGRCFKAVQEIVINGYERGGLD EQRSDTAANVLDHHFSSSE
Sbjct: 241 RKAILNCSYDNKEEEEEMLGRCFKAVQEIVINGYERGGLDIEQRSDTAANVLDHHFSSSE 300

Query: 301 SENTFMGTSSSAAAVTNRADKDGKKRKVGVRQSKNERCIQHC 308
           SENTFMGTSSS+AAVTNRADKDGKKRKVGVRQSKNERCIQHC
Sbjct: 301 SENTFMGTSSSSAAVTNRADKDGKKRKVGVRQSKNERCIQHC 342

[Close]

BLAST of Cp4.1LG16g04760 vs. ExPASy TrEMBL
Match: A0A6J1FX02 (B-like cyclin OS=Cucurbita moschata OX=3662 GN=LOC111449015 PE=3 SV=1)

HSP 1 Score: 585 bits (1509), Expect = 4.26e-210
Identity = 302/342 (88.30%), Postives = 306/342 (89.47%), Query Frame = 0


Query: 1   MPSLFHHHSLSHSTSSLLSLSMDFDLENPFTHLHHPHSSDAATLFLIESDHMLSPTYLHT 60
           MPSLFHHHSLSHSTSSLLSLSMDFDLENPFTHLHHPHSSDAATLFLIESDHMLSPTYLHT
Sbjct: 1   MPSLFHHHSLSHSTSSLLSLSMDFDLENPFTHLHHPHSSDAATLFLIESDHMLSPTYLHT 60

Query: 61  LHSSPSDSSVRQDTISLISQCCCSCNIDPHLSYLAVNYLDRFFSFQGVPQPKPWVLRLLA 120
           LHSSP+DSSVR+DTISLISQCCCSCNIDPHLSYLAVNYLDRFFSFQGVPQPKPWVLRLLA
Sbjct: 61  LHSSPTDSSVRRDTISLISQCCCSCNIDPHLSYLAVNYLDRFFSFQGVPQPKPWVLRLLA 120

Query: 121 VSCVSLAAKMKQTEHNLFDFQGNEGFIFDPQTVHRMESLILGALKWRMRSITPFSFVPFF 180
           VSCVSLAAKMKQTEHNLFDFQGNEGFIFDPQTVHRMESLILGALKWRMRSITPFSFVPFF
Sbjct: 121 VSCVSLAAKMKQTEHNLFDFQGNEGFIFDPQTVHRMESLILGALKWRMRSITPFSFVPFF 180

Query: 181 ISLFKLRDPPLLQALKARATEIIFIAQNGIELLEFKAS---------------------- 240
           ISLFKLRDPPLLQALKARATEIIFIAQNGIELLEFK S                      
Sbjct: 181 ISLFKLRDPPLLQALKARATEIIFIAQNGIELLEFKPSVIAASALLSAAHELFPIQYPCF 240

Query: 241 ------------EEEEEILGRCFKAVQEIVINGYERGGLDREQRSDTAANVLDHHFSSSE 300
                       EEEEE+LGRCFKAVQEIVINGYERGGLD EQRSDTAANVLDHHFSSSE
Sbjct: 241 RKAILNCSYVNKEEEEEMLGRCFKAVQEIVINGYERGGLDIEQRSDTAANVLDHHFSSSE 300

Query: 301 SENTFMGTSSSAAAVTNRADKDGKKRKVGVRQSKNERCIQHC 308
           SENTFMGTSSSA+AVTNRADKDGKKRKVGVRQSKNERCIQHC
Sbjct: 301 SENTFMGTSSSASAVTNRADKDGKKRKVGVRQSKNERCIQHC 342

[Close]

BLAST of Cp4.1LG16g04760 vs. ExPASy TrEMBL
Match: A0A6J1JAT5 (B-like cyclin OS=Cucurbita maxima OX=3661 GN=LOC111484105 PE=3 SV=1)

HSP 1 Score: 568 bits (1464), Expect = 3.06e-203
Identity = 294/342 (85.96%), Postives = 301/342 (88.01%), Query Frame = 0


Query: 1   MPSLFHHHSLSHSTSSLLSLSMDFDLENPFTHLHHPHSSDAATLFLIESDHMLSPTYLHT 60
           MPSLF+HHSLSHSTSSLLSLSMDFDLENP THLH PHSSDAATLFLIESDHMLSPTYLHT
Sbjct: 1   MPSLFYHHSLSHSTSSLLSLSMDFDLENPLTHLHDPHSSDAATLFLIESDHMLSPTYLHT 60

Query: 61  LHSSPSDSSVRQDTISLISQCCCSCNIDPHLSYLAVNYLDRFFSFQGVPQPKPWVLRLLA 120
           LHS+PSDSSVR+DTIS ISQCCCSCNIDPHLSYLAVNYLDRFFSFQGVPQPKPWVLRLLA
Sbjct: 61  LHSTPSDSSVRRDTISFISQCCCSCNIDPHLSYLAVNYLDRFFSFQGVPQPKPWVLRLLA 120

Query: 121 VSCVSLAAKMKQTEHNLFDFQGNEGFIFDPQTVHRMESLILGALKWRMRSITPFSFVPFF 180
           VSCVSLAAKMKQTEHNLFDFQGNE FIFDPQTVHRMESLILGALKWRMRSITPFSFVPFF
Sbjct: 121 VSCVSLAAKMKQTEHNLFDFQGNECFIFDPQTVHRMESLILGALKWRMRSITPFSFVPFF 180

Query: 181 ISLFKLRDPPLLQALKARATEIIFIAQNGIELLEFKAS---------------------- 240
           ISLF+LRDPPLLQALK RATEIIFI+QNGIELLEFK S                      
Sbjct: 181 ISLFELRDPPLLQALKGRATEIIFISQNGIELLEFKPSVIAASALLSAAHELFPIQYPCF 240

Query: 241 ------------EEEEEILGRCFKAVQEIVINGYERGGLDREQRSDTAANVLDHHFSSSE 300
                       EEEEE+LGRCFKAVQEIVINGYERGGLD EQRSDTAANVLDHHFSSSE
Sbjct: 241 RKAILNCSYDNKEEEEEMLGRCFKAVQEIVINGYERGGLDIEQRSDTAANVLDHHFSSSE 300

Query: 301 SENTFMGTSSSAAAVTNRADKDGKKRKVGVRQSKNERCIQHC 308
           SENTFMGTSSS+AAVTNRADKDGKKRKVGVRQSKNERCIQHC
Sbjct: 301 SENTFMGTSSSSAAVTNRADKDGKKRKVGVRQSKNERCIQHC 342

[Close]

BLAST of Cp4.1LG16g04760 vs. ExPASy TrEMBL
Match: A0A1S3BJ71 (B-like cyclin OS=Cucumis melo OX=3656 GN=LOC103490479 PE=3 SV=1)

HSP 1 Score: 419 bits (1078), Expect = 6.95e-145
Identity = 233/325 (71.69%), Postives = 246/325 (75.69%), Query Frame = 0


Query: 22  MDFDLENPFTHLHHPHSSDAATLFLIESDHMLSPTYLHTLHSSPSDSSVRQDTISLISQC 81
           MDFDLENP THLH  HS DA+ LFL ESDHMLSP+YLHTL SSPSD +VRQDT+S ISQC
Sbjct: 1   MDFDLENPLTHLHQLHSDDAS-LFLTESDHMLSPSYLHTLLSSPSDFAVRQDTVSFISQC 60

Query: 82  CCSCNIDPHLSYLAVNYLDRFFSFQGVPQPKPWVLRLLAVSCVSLAAKMKQTEHNLFDFQ 141
           C + NIDPHLSYLAVNYLDRFFS QGVPQPKPWVLRLLAVSCVSLAAKMKQ EHNLFDFQ
Sbjct: 61  CSNSNIDPHLSYLAVNYLDRFFSSQGVPQPKPWVLRLLAVSCVSLAAKMKQIEHNLFDFQ 120

Query: 142 GNEGFIFDPQTVHRMESLILGALKWRMRSITPFSFVPFFISLFKLRDPPLLQALKARATE 201
           GNEGFIFDPQTVHRME LILGALKWRMRSITPFSF+PFFISLFKLRDPPLLQALK RATE
Sbjct: 121 GNEGFIFDPQTVHRMEVLILGALKWRMRSITPFSFIPFFISLFKLRDPPLLQALKGRATE 180

Query: 202 IIFIAQNGIELLEFKAS-----------------------------------EEEEEILG 261
           IIFIAQNGIELLEFKAS                                   E EEE L 
Sbjct: 181 IIFIAQNGIELLEFKASVIAAAALLSAAHELFPIQYPCFRKAIINCSYVKKEENEEEKLV 240

Query: 262 RCFKAVQEIVINGYERGGLDREQRSDTAANVLDHHFSSSESENTFMGTSSSAAAVTNRAD 308
           RC KAV+EIVING+ERG  + E+RS+TA NVLDHHFSSSESENT        +A+ NR D
Sbjct: 241 RCLKAVEEIVINGHERGMDEMEERSETAGNVLDHHFSSSESENT--------SAMKNRGD 300

[Close]

BLAST of Cp4.1LG16g04760 vs. ExPASy TrEMBL
Match: A0A6J1I1E1 (B-like cyclin OS=Cucurbita maxima OX=3661 GN=LOC111469628 PE=3 SV=1)

HSP 1 Score: 406 bits (1043), Expect = 1.80e-139
Identity = 221/314 (70.38%), Postives = 244/314 (77.71%), Query Frame = 0


Query: 22  MDFDLENPFTHLHHPHSSDAATLFLIESDHMLSPTYLHTLHSSPSDSSVRQDTISLISQC 81
           M+FDLENP THL   HSSDA++LFLIESDHMLS +YLH+L +SPSD +VR+DTISLIS C
Sbjct: 1   MEFDLENPLTHLQDLHSSDASSLFLIESDHMLSQSYLHSLQASPSDFAVRRDTISLISHC 60

Query: 82  CCSCNIDPHLSYLAVNYLDRFFSFQGVPQPKPWVLRLLAVSCVSLAAKMKQTEHNLFDF- 141
             +  I PH SYLAVNYLDRFFS QGVPQPKPWVLRLLAVSCVSLAAKMKQT+HNLFDF 
Sbjct: 61  SSNSKIGPHFSYLAVNYLDRFFSIQGVPQPKPWVLRLLAVSCVSLAAKMKQTDHNLFDFM 120

Query: 142 -QGNEGFIFDPQTVHRMESLILGALKWRMRSITPFSFVPFFISLFKLRDPPLLQALKARA 201
            Q NEGFIFDPQT+HRME L+LGALKWRMRSITPFSF+PFFISLFKLRDPP LQALKARA
Sbjct: 121 EQSNEGFIFDPQTLHRMEVLVLGALKWRMRSITPFSFIPFFISLFKLRDPPFLQALKARA 180

Query: 202 TEIIFIAQNGIELLEFKAS-------------------------------EEEEEILGRC 261
           TEIIFIAQNGIE+LEFK S                               E  EE+L +C
Sbjct: 181 TEIIFIAQNGIEVLEFKPSVIAAAALLSASHELFPIQYTCFKKAILECSYENTEEMLVKC 240

Query: 262 FKAVQEIVINGYERGGLDREQRSDTAANVLDHHFSSSESENTFMGTSSSAAAVTNRADKD 302
           FK VQ IVINGYERG L+ E+RSDTAANVLDHHFSSSE ENTFM  S  ++++ NRADK 
Sbjct: 241 FKRVQAIVINGYERG-LEMEERSDTAANVLDHHFSSSEIENTFM-PSRVSSSLMNRADKG 300

[Close]

BLAST of Cp4.1LG16g04760 vs. ExPASy TrEMBL
Match: A0A6J1G6E0 (B-like cyclin OS=Cucurbita moschata OX=3662 GN=LOC111451183 PE=3 SV=1)

HSP 1 Score: 402 bits (1033), Expect = 5.96e-138
Identity = 221/314 (70.38%), Postives = 245/314 (78.03%), Query Frame = 0


Query: 22  MDFDLENPFTHLHHPHSSDAATLFLIESDHMLSPTYLHTLHSSPSDSSVRQDTISLISQC 81
           M+FDLENP THL   HSSDA++L LIESDHMLS +YLH+L +SPSD +VR+DTISLIS C
Sbjct: 1   MEFDLENPLTHLQDLHSSDASSLLLIESDHMLSQSYLHSLQASPSDFAVRRDTISLISHC 60

Query: 82  CCSCNIDPHLSYLAVNYLDRFFSFQGVPQPKPWVLRLLAVSCVSLAAKMKQTEHNLFDF- 141
             + NI PH SYLAVNYLDRFFS QGVPQPKPWVLRLLAV+CVSLAAKMKQT+HNLFDF 
Sbjct: 61  SSNSNIGPHFSYLAVNYLDRFFSIQGVPQPKPWVLRLLAVACVSLAAKMKQTDHNLFDFM 120

Query: 142 -QGNEGFIFDPQTVHRMESLILGALKWRMRSITPFSFVPFFISLFKLRDPPLLQALKARA 201
            Q NEGFIFDPQT+HRME LILGALKWRMRSITPFSF+PFFISLFKLRDPP LQALKARA
Sbjct: 121 EQSNEGFIFDPQTLHRMEVLILGALKWRMRSITPFSFIPFFISLFKLRDPPFLQALKARA 180

Query: 202 TEIIFIAQNGIELLEFK-----------ASEE--------------------EEEILGRC 261
           T+IIFIAQNGIE+LEFK           AS E                     EE+L +C
Sbjct: 181 TKIIFIAQNGIEVLEFKPSVIAAAALLSASHELFPIQYPCFRKAILECSYGNTEEMLVKC 240

Query: 262 FKAVQEIVINGYERGGLDREQRSDTAANVLDHHFSSSESENTFMGTSSSAAAVTNRADKD 302
           F+ VQEIVINGYERG L+ E+RSDTAANVLDHHFSSSESENTFM    S++ + NRADK 
Sbjct: 241 FERVQEIVINGYERG-LEMEERSDTAANVLDHHFSSSESENTFMPGRGSSSLM-NRADKG 300

[Close]

BLAST of Cp4.1LG16g04760 vs. TAIR 10
Match: AT4G03270.1 (Cyclin D6;1 )

HSP 1 Score: 187.2 bits (474), Expect = 2.0e-47
Identity = 128/320 (40.00%), Postives = 182/320 (56.88%), Query Frame = 0


Query: 22  MDFDLENPFTH--LHHPHSSDA------ATLFLIESDHMLSPTYLHTLHSSPSDSSVRQD 81
           M+F LE+P +H  LH+  + D        +LFL+E  HM S  Y H+L SS    S R  
Sbjct: 1   MEFHLEHPLSHSSLHNNFNDDTDYETLPHSLFLVEFQHMPSSHYFHSLKSSAFLLSNRNQ 60

Query: 82  TISLISQCCCSCNIDPHLSYLAVNYLDRFFSFQGVPQPKPWVLRLLAVSCVSLAAKMKQT 141
            IS I+Q     + DP L+YLAVNYLDRF S + +PQ KPW+L+L+++SCVSL+AKM++ 
Sbjct: 61  AISSITQYSRKFD-DPSLTYLAVNYLDRFLSSEDMPQSKPWILKLISLSCVSLSAKMRKP 120

Query: 142 EHNLFDFQGNEGFIFDPQTVHRMESLILGALKWRMRSITPFSFVPFFISLFKLR--DPPL 201
           + ++ D    EG  FD Q + RME++ILGALKWRMRS+TPFSF+ FFISLF+L+  DP L
Sbjct: 121 DMSVSDLP-VEGEFFDAQMIERMENVILGALKWRMRSVTPFSFLAFFISLFELKEEDPLL 180

Query: 202 LQ-ALKARATEIIFIAQNGIELLEFKAS------------------------------EE 261
           L+ +LK++ +++ F  Q+ I  LEFK S                                
Sbjct: 181 LKHSLKSQTSDLTFSLQHDISFLEFKPSVIAGAALLFASFELCPLQFPCFSNRINQCTYV 240

Query: 262 EEEILGRCFKAVQE--IVINGYERGGLDREQRSDTAANVLDHHFSSSESENTFMGTSSSA 299
            ++ L  C+KA+QE  I++        + E  ++TA NVLD  FSS ES+ +   T+SS+
Sbjct: 241 NKDELMECYKAIQERDIIVG-------ENEGSTETAVNVLDQQFSSCESDKSITITASSS 300

[Close]

BLAST of Cp4.1LG16g04760 vs. TAIR 10
Match: AT5G65420.1 (CYCLIN D4;1 )

HSP 1 Score: 124.8 bits (312), Expect = 1.2e-28
Identity = 71/175 (40.57%), Postives = 105/175 (60.00%), Query Frame = 0


Query: 48  ESDHMLSPTYLHTLHSSPSDSSV-RQDTISLISQCCCSCNIDPHLSYLAVNYLDRFFSFQ 107
           E  H+ S  Y+  L S   D +V R+D ++ I + C      P    LA+NYLDRF S  
Sbjct: 54  EKQHLPSDDYIKRLRSGDLDLNVGRRDALNWIWKACEVHQFGPLCFCLAMNYLDRFLSVH 113

Query: 108 GVPQPKPWVLRLLAVSCVSLAAKMKQTE-HNLFDFQ-GNEGFIFDPQTVHRMESLILGAL 167
            +P  K W+L+LLAV+C+SLAAK+++TE   L D Q G+  F+F+ ++V RME L+L  L
Sbjct: 114 DLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDLQVGDPQFVFEAKSVQRMELLVLNKL 173

Query: 168 KWRMRSITPFSFVPFFISLFKLRDPPLLQALKARATEIIFIAQNGIELLEFKASE 220
           KWR+R+ITP S++ +F+      D      L +R+ ++I     GI+ LEF+ SE
Sbjct: 174 KWRLRAITPCSYIRYFLRKMSKCDQEPSNTLISRSLQVIASTTKGIDFLEFRPSE 228

[Close]

BLAST of Cp4.1LG16g04760 vs. TAIR 10
Match: AT5G10440.1 (cyclin d4;2 )

HSP 1 Score: 119.8 bits (299), Expect = 3.9e-27
Identity = 71/188 (37.77%), Postives = 104/188 (55.32%), Query Frame = 0


Query: 36  PHSSDAATLFLIESDHMLSP--TYLHTLHSSPSDSSVRQDTISLISQCCCSCNIDPHLSY 95
           P  S+     +IE +   SP   YL  L +   D +VR   +  I + C      P    
Sbjct: 32  PLESEEIVREMIEKERQHSPRDDYLKRLRNGDLDFNVRIQALGWIWKACEELQFGPLCIC 91

Query: 96  LAVNYLDRFFSFQGVPQPKPWVLRLLAVSCVSLAAKMKQTE-HNLFDFQ-GNEGFIFDPQ 155
           LA+NYLDRF S   +P  K W ++LLAV+C+SLAAK+++T    L   Q G   F+F+ +
Sbjct: 92  LAMNYLDRFLSVHDLPSGKAWTVQLLAVACLSLAAKIEETNVPELMQLQVGAPMFVFEAK 151

Query: 156 TVHRMESLILGALKWRMRSITPFSFVPFFISLFKLRDPPLLQALKARATEIIFIAQNGIE 215
           +V RME L+L  L+WR+R++TP S+V +F+S     D      L  R+ ++I     GI+
Sbjct: 152 SVQRMELLVLNVLRWRLRAVTPCSYVRYFLSKINGYDQEPHSRLVTRSLQVIASTTKGID 211

Query: 216 LLEFKASE 220
            LEF+ASE
Sbjct: 212 FLEFRASE 219

[Close]

BLAST of Cp4.1LG16g04760 vs. TAIR 10
Match: AT5G65420.3 (CYCLIN D4;1 )

HSP 1 Score: 119.0 bits (297), Expect = 6.7e-27
Identity = 72/185 (38.92%), Postives = 106/185 (57.30%), Query Frame = 0


Query: 48  ESDHMLSPTYLHTLHSSPSDSSV-RQDTISLISQCCCSCNID----------PHLSYLAV 107
           E  H+ S  Y+  L S   D +V R+D ++ I +    C  D          P    LA+
Sbjct: 54  EKQHLPSDDYIKRLRSGDLDLNVGRRDALNWIWKIRGLCRTDREACEVHQFGPLCFCLAM 113

Query: 108 NYLDRFFSFQGVPQPKPWVLRLLAVSCVSLAAKMKQTE-HNLFDFQ-GNEGFIFDPQTVH 167
           NYLDRF S   +P  K W+L+LLAV+C+SLAAK+++TE   L D Q G+  F+F+ ++V 
Sbjct: 114 NYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDLQVGDPQFVFEAKSVQ 173

Query: 168 RMESLILGALKWRMRSITPFSFVPFFISLFKLRDPPLLQALKARATEIIFIAQNGIELLE 220
           RME L+L  LKWR+R+ITP S++ +F+      D      L +R+ ++I     GI+ LE
Sbjct: 174 RMELLVLNKLKWRLRAITPCSYIRYFLRKMSKCDQEPSNTLISRSLQVIASTTKGIDFLE 233

[Close]

BLAST of Cp4.1LG16g04760 vs. TAIR 10
Match: AT5G65420.2 (CYCLIN D4;1 )

HSP 1 Score: 113.2 bits (282), Expect = 3.7e-25
Identity = 65/165 (39.39%), Postives = 97/165 (58.79%), Query Frame = 0


Query: 48  ESDHMLSPTYLHTLHSSPSDSSV-RQDTISLISQCCCSCNIDPHLSYLAVNYLDRFFSFQ 107
           E  H+ S  Y+  L S   D +V R+D ++ I + C      P    LA+NYLDRF S  
Sbjct: 54  EKQHLPSDDYIKRLRSGDLDLNVGRRDALNWIWKACEVHQFGPLCFCLAMNYLDRFLSVH 113

Query: 108 GVPQPKPWVLRLLAVSCVSLAAKMKQTE-HNLFDFQ-GNEGFIFDPQTVHRMESLILGAL 167
            +P  K W+L+LLAV+C+SLAAK+++TE   L D Q G+  F+F+ ++V RME L+L  L
Sbjct: 114 DLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDLQVGDPQFVFEAKSVQRMELLVLNKL 173

Query: 168 KWRMRSITPFSFVPFFISLFKLRDPPLLQALKARATEIIFIAQNG 210
           KWR+R+ITP S++ +F+      D      L +R+ ++I     G
Sbjct: 174 KWRLRAITPCSYIRYFLRKMSKCDQEPSNTLISRSLQVIASTTKG 218

The following BLAST results are available for this feature:

BLAST of Cp4.1LG16g04760 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZR04	2.8e-46	40.00	Putative cyclin-D6-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD6-1 PE=3 SV=1	[more]
Q8LGA1	1.7e-27	40.57	Cyclin-D4-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD4-1 PE=1 SV=2	[more]
Q69S43	6.5e-27	33.12	Cyclin-D6-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD6-1 PE=2 SV=1	[more]
Q6YXH8	8.5e-27	38.95	Cyclin-D4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD4-1 PE=2 SV=2	[more]
Q0WQN9	5.5e-26	37.77	Cyclin-D4-2 OS=Arabidopsis thaliana OX=3702 GN=CYCD4-2 PE=1 SV=2	[more]

BLAST of Cp4.1LG16g04760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023512860.1	9.60e-214	90.06	putative cyclin-D6-1 [Cucurbita pepo subsp. pepo]	[more]
XP_022944609.1	8.80e-210	88.30	putative cyclin-D6-1 [Cucurbita moschata]	[more]
KAG6570855.1	2.52e-209	88.01	putative cyclin-D6-1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7010705.1	1.20e-207	88.01	putative cyclin-D6-1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022986331.1	6.32e-203	85.96	putative cyclin-D6-1 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG16g04760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FX02	4.26e-210	88.30	B-like cyclin OS=Cucurbita moschata OX=3662 GN=LOC111449015 PE=3 SV=1	[more]
A0A6J1JAT5	3.06e-203	85.96	B-like cyclin OS=Cucurbita maxima OX=3661 GN=LOC111484105 PE=3 SV=1	[more]
A0A1S3BJ71	6.95e-145	71.69	B-like cyclin OS=Cucumis melo OX=3656 GN=LOC103490479 PE=3 SV=1	[more]
A0A6J1I1E1	1.80e-139	70.38	B-like cyclin OS=Cucurbita maxima OX=3661 GN=LOC111469628 PE=3 SV=1	[more]
A0A6J1G6E0	5.96e-138	70.38	B-like cyclin OS=Cucurbita moschata OX=3662 GN=LOC111451183 PE=3 SV=1	[more]

BLAST of Cp4.1LG16g04760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G03270.1	2.0e-47	40.00	Cyclin D6;1	[more]
AT5G65420.1	1.2e-28	40.57	CYCLIN D4;1	[more]
AT5G10440.1	3.9e-27	37.77	cyclin d4;2	[more]
AT5G65420.3	6.7e-27	38.92	CYCLIN D4;1	[more]
AT5G65420.2	3.7e-25	39.39	CYCLIN D4;1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013763	Cyclin-like	SMART	SM00385	cyclin_7	coord: 76..162 e-value: 1.9E-8 score: 44.1
IPR013763	Cyclin-like	CDD	cd00043	CYCLIN	coord: 71..161 e-value: 6.26045E-12 score: 58.7892
None	No IPR available	GENE3D	1.10.472.10		coord: 54..169 e-value: 6.9E-28 score: 99.5
None	No IPR available	GENE3D	1.10.472.10		coord: 44..218 e-value: 6.9E-28 score: 99.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 266..297
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 266..282
None	No IPR available	PANTHER	PTHR10177:SF188	CYCLIN-D6-1-RELATED	coord: 26..218
IPR006671	Cyclin, N-terminal	PFAM	PF00134	Cyclin_N	coord: 51..168 e-value: 1.9E-18 score: 66.5
IPR039361	Cyclin	PANTHER	PTHR10177	CYCLINS	coord: 26..218
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 42..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG16g04760.1	Cp4.1LG16g04760.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007049	cell cycle
biological_process	GO:0051301	cell division