Cp4.1LG16g03460 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG16g03460
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Integral membrane protein hemolysin-III, putative isoform 1
Location	Cp4.1LG16: 5257552 .. 5261305 (+)
RNA-Seq Expression	Cp4.1LG16g03460
Synteny	Cp4.1LG16g03460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCCCTTGAGGAGCCATGATGATCCACGTGTCTTTCGTCTTGTTAAATCCTCTCCGAATTTGCAGCAGCTTCAACATTTTGTGTCCAAATTTGATTCTGATGAGGAAATATAAATCCATTTTCAAGGTAATTTGATGGACTGAGCAGTGAACAAACTGTATGAATTTGAGAATCGAAGCTTTCTTCTTCCTTCCGATTCCACATGGCACTCCCTTCTCCATCGGAGCGCTTCCAATGAGCTAAGGTAAGAACGAATGCTTTTCATACAATTTGTTTCCGATTTCGTTCGACGAATTTTCCTTTTTCACGAAGAGGTTTCGGTTTCTGTGTTATTTTTCAAATGGAGATGATGATCAGCTCGTCTTTTGTCGTAGGAGTTCTCCTGAATTTACTTCTGCTTCGATTTGATTTCTACCTAGGTTTTCTCTGAGCTAGTTTCGTATTTTAAGAATTGATGGAGAATCATAACTTCCTATTGATGCGCGTTTTTTTTTTCTCTTCTGCTTCAAAATTTCATTCGTATAAGCCCTGCACTTCCGCATTTTAATCGTAAGAGAAACGAGGAGAAACTGGAAACTCATAGAGGAAGCAAGATACTTAATAGTTTATGCTCCTCAAGTTTGTATGCTTTCAGTGTGATTTCAATAGTTGAGTTTAATGCATTGTATTTCGTCCGTTCTGGTGACTTTACCTTTAGCTCTGAGATTCAGCTCCATTGTGTGTAAAGCAAAGCGGCTTCGATTAGCAACAAGCTTTGTCAATTTACCTATATCAAAGTATATTCTAGGGCTGTGGTTGATGAAAGAAATTTACCTTGGAAATGTGGAGCTGCTGCAATACTTTCTTGGGACAATTTGTGTTATTCTGGTTGATATCTAATATATCTTGTATTCTTTTGCTTTATTATCTAACAATTTACCGTTATATTGTTAGACGTCGAACAGCTTATTGTAAACCTTAAACCTAATTGAAAGGAGTCCCTCATGTTCAGCTGGTCCCATAGAGGTCTAAGCCTTCGGTAATAAATAGTATAGTACACTGATTTCTTGTTTTGACCCATAAGCTAAGACATGTTCTTCATGTTGCAACTAATAGAAAGGTAATCATCCTAAGAATCAGAGAGGGTCGAAGGCTCGAGCGAGGAAGGGTGGCGAAGGAAACCCATAATTAGAATGTGGGTATCTAGACTCGAGAGAGGGAATTTGTCACGCCTGTAAATAGTAGAAGTATGAAGAACGGGAGGGGTTTTGGAATTATGAGAAGTTTGCCCCTTAGGAAAGTGTTGCTGAACAAGAAAAAATGGTCATGAGTGGAGATTCTATGATTGCTGGAAGAACTGGGAAGTCTGACATTTGATTTCTTTTTATGGTTCTAAGACATGGAAAATAGTTTTTAAAGCTCATCTTGTTGGATGATTTTTGAAAATAATCGCTCTAACAAAATGGAAATATTGCTTCTCAAATAGAAATAGAAAGCATTCTCATTAATTATCTTTCCTTATGAGAGCTTCCATCAAAATGGATATATATCCATGCCCTGAAATTTATTGTTCATAAGCTAACATTTATTGTTCTATATCCATGTGTAGATCTGAGTGTTAATTTGAATGATACTGATTTCTAAAGGGTTTTATATCCACGCCCTGACATTTATTGTTCATCTTCATGTATGTATTATGTAACCCTTCAAACTTTTAAACTTCTCAGATGGTTCAGAAATCCATAGACTCCAAATTCAGTGAATATGGACATGGAAATTCTGGGAAGGACGTGCCTTCTCAGGAAAAGCAAATGCAGATTTCTGCAAAGAAGACAGCATTAAGGGACTTGCAAAATGATAATAGGGTCACAGCTTCCCATTGTACTGGAAGCTCTCCTCTTTTGAAGGAAAGAGGTCCGAGTAGTGACTTCATTAAAGTTTCTGGTAACAACCCAGCAACTCCGTCTCATCTCCATTCTTCGACTTCTAATGCTTCAAATGGGCATCTTGTTTACGTCCGTAGAAAGTCCGAGGTAGATATTGGGAAGAATAGTCCTTGTGATAGTACCAACATGAAAGGTGATTATCCAAATCTAAGTAAACTCGGTCAACTAGCTGAAACCGCGCATCTCAAATCCCAGGTTAAGGAGCTACAGAATCATTGCTTTCCAGCATTTGCTCCTTTTCCAATGGTGTCTCCCATGAATGCATCTGGAAAACCTTCAGTTCCTCATCACGTTGGAAAATATGGCATTAATTTCGCCACAGCAGAATCGAACTTCCATCCTGCACCTTCTACTGTCCCTTCAGGATGGAAAAATTTGCAGTGGGAAGACAGATATCATCAGTTGCAATTGTTATTGCATAAATTGGACCAATCAGATCAACAAGATTATCTTCAGGGTATGCTTTTGCTTTGCATTTAAGAAAGTGCTTTATCTTATTCCTGAAATGGTTTGACTGATCCTTATTTACTCCATGGATAATTTCACACTTCTATCAGTGCTTCGATCGCTTTCATCGGTTGAACTTAGCAGACATGCAGTCGAATTGGAAAGGAGATCCATTCAGCTCTCGCTTGAAGAAGGTAGTTTGATTTCTGGTTTTACATAATTTCACTTTCCTTTTTTATGATCTGGGGAAACTTAGTAGTCTGCAAATGGATTAATATCAAATCATGGTAGATCTCCTCAAAGTAATGTTGAGGATGGTTGGGAGTCCGACATTGGCTAATTAAGTGGTTGATAATGGGTTTATAAGTAAGAAATACATCTCCATTGGTATGAGGCCTTTTGGTGAAACTAAAAGTCCCGAGAGCTTTTGCTCGAAGTGGACAATATCATACCATTGTGAAGGGTCGTGGTTCCTAACATGGTATCAGAGTCATGCGTTTAACTTAGCTATGTCAATAGAATCCTTAAGTTTCGAACAAAAAAGTTGCTAGCGTCGAAAGTGCAGGCAAAAGTGACTCAAGTGTCGAAAAAATGGTGTACTTTGTTCAAGGGCTCTAGGGAAAAAAGTCAAGCCTCGATTAAGGGGAGACTGTTCGAGGGCTACATAGACCTCAGGGGAGGCTCTATGGTGTACTTTGTTCGGGGAGGATTAATGAGGATTGTTGGTAGTCCCACATTGGCTAATTAATGAGTACGAGGCCTTTTAGGAAAATCAAGAGTGAAGTCATGAGAGCTTATGCTCAAAGTAGACAATATCATATCATTGTAGAGGATCGTGGTTCCTAACAAGTAAGTTTAAAGCTTCTTTTCATTTCAGCCCAGTGGTAACTTGTATCAAGCATACATGTCTGCTCAATATATGAAACATCAAACAGCTTCCTTCTGCTTTGGAACATGATCATAGTAACTTAAAATTCCTCTTTTCTTCATCACAGCAAAAGAGCTGCAGCGAGTTGGGGTTTTGAATGTGCTGGAAAATCCTGTAAAGAGTATCAAAACGCCGTTGACTCATCACGACGGTTCAGAGACGTAAGAGTATGTGCAGCATACTGTTGTTCTTCACGTCGGTTGGACGATGAAAACGTGCTGGATTGCAGTTGAATCGAGTTTGTTCTGAATTCACAATTCTCGGTCGCCAACAACCGGAAGCTTGCTGGTTTCTTGTAATATTCTGCCAACTATTTCATTAACGATATTTCTCATTTGTTTTGCAAAGGTTGTAACAAAAGATTGCAACTGCATGCCTTGACTGACTGTTACCAGGAACAAGAATGGAAACAAAATCCCCTACTGGTCACATCCTCCTATACTTCCTTTTTCTT

mRNA sequence

GGCCCTTGAGGAGCCATGATGATCCACGTGTCTTTCGTCTTGTTAAATCCTCTCCGAATTTGCAGCAGCTTCAACATTTTGTGTCCAAATTTGATTCTGATGAGGAAATATAAATCCATTTTCAAGGTAATTTGATGGACTGAGCAGTGAACAAACTGTATGAATTTGAGAATCGAAGCTTTCTTCTTCCTTCCGATTCCACATGGCACTCCCTTCTCCATCGGAGCGCTTCCAATGAGCTAAGATGGTTCAGAAATCCATAGACTCCAAATTCAGTGAATATGGACATGGAAATTCTGGGAAGGACGTGCCTTCTCAGGAAAAGCAAATGCAGATTTCTGCAAAGAAGACAGCATTAAGGGACTTGCAAAATGATAATAGGGTCACAGCTTCCCATTGTACTGGAAGCTCTCCTCTTTTGAAGGAAAGAGGTCCGAGTAGTGACTTCATTAAAGTTTCTGGTAACAACCCAGCAACTCCGTCTCATCTCCATTCTTCGACTTCTAATGCTTCAAATGGGCATCTTGTTTACGTCCGTAGAAAGTCCGAGGTAGATATTGGGAAGAATAGTCCTTGTGATAGTACCAACATGAAAGGTGATTATCCAAATCTAAGTAAACTCGGTCAACTAGCTGAAACCGCGCATCTCAAATCCCAGGTTAAGGAGCTACAGAATCATTGCTTTCCAGCATTTGCTCCTTTTCCAATGGTGTCTCCCATGAATGCATCTGGAAAACCTTCAGTTCCTCATCACGTTGGAAAATATGGCATTAATTTCGCCACAGCAGAATCGAACTTCCATCCTGCACCTTCTACTGTCCCTTCAGGATGGAAAAATTTGCAGTGGGAAGACAGATATCATCAGTTGCAATTGTTATTGCATAAATTGGACCAATCAGATCAACAAGATTATCTTCAGGTGCTTCGATCGCTTTCATCGGTTGAACTTAGCAGACATGCAGTCGAATTGGAAAGGAGATCCATTCAGCTCTCGCTTGAAGAAGCAAAAGAGCTGCAGCGAGTTGGGGTTTTGAATGTGCTGGAAAATCCTGTAAAGAGTATCAAAACGCCGTTGACTCATCACGACGGTTCAGAGACGTAAGAGTATGTGCAGCATACTGTTGTTCTTCACGTCGGTTGGACGATGAAAACGTGCTGGATTGCAGTTGAATCGAGTTTGTTCTGAATTCACAATTCTCGGTCGCCAACAACCGGAAGCTTGCTGGTTTCTTGTAATATTCTGCCAACTATTTCATTAACGATATTTCTCATTTGTTTTGCAAAGGTTGTAACAAAAGATTGCAACTGCATGCCTTGACTGACTGTTACCAGGAACAAGAATGGAAACAAAATCCCCTACTGGTCACATCCTCCTATACTTCCTTTTTCTT

Coding sequence (CDS)

ATGGTTCAGAAATCCATAGACTCCAAATTCAGTGAATATGGACATGGAAATTCTGGGAAGGACGTGCCTTCTCAGGAAAAGCAAATGCAGATTTCTGCAAAGAAGACAGCATTAAGGGACTTGCAAAATGATAATAGGGTCACAGCTTCCCATTGTACTGGAAGCTCTCCTCTTTTGAAGGAAAGAGGTCCGAGTAGTGACTTCATTAAAGTTTCTGGTAACAACCCAGCAACTCCGTCTCATCTCCATTCTTCGACTTCTAATGCTTCAAATGGGCATCTTGTTTACGTCCGTAGAAAGTCCGAGGTAGATATTGGGAAGAATAGTCCTTGTGATAGTACCAACATGAAAGGTGATTATCCAAATCTAAGTAAACTCGGTCAACTAGCTGAAACCGCGCATCTCAAATCCCAGGTTAAGGAGCTACAGAATCATTGCTTTCCAGCATTTGCTCCTTTTCCAATGGTGTCTCCCATGAATGCATCTGGAAAACCTTCAGTTCCTCATCACGTTGGAAAATATGGCATTAATTTCGCCACAGCAGAATCGAACTTCCATCCTGCACCTTCTACTGTCCCTTCAGGATGGAAAAATTTGCAGTGGGAAGACAGATATCATCAGTTGCAATTGTTATTGCATAAATTGGACCAATCAGATCAACAAGATTATCTTCAGGTGCTTCGATCGCTTTCATCGGTTGAACTTAGCAGACATGCAGTCGAATTGGAAAGGAGATCCATTCAGCTCTCGCTTGAAGAAGCAAAAGAGCTGCAGCGAGTTGGGGTTTTGAATGTGCTGGAAAATCCTGTAAAGAGTATCAAAACGCCGTTGACTCATCACGACGGTTCAGAGACGTAA

Protein sequence

MVQKSIDSKFSEYGHGNSGKDVPSQEKQMQISAKKTALRDLQNDNRVTASHCTGSSPLLKERGPSSDFIKVSGNNPATPSHLHSSTSNASNGHLVYVRRKSEVDIGKNSPCDSTNMKGDYPNLSKLGQLAETAHLKSQVKELQNHCFPAFAPFPMVSPMNASGKPSVPHHVGKYGINFATAESNFHPAPSTVPSGWKNLQWEDRYHQLQLLLHKLDQSDQQDYLQVLRSLSSVELSRHAVELERRSIQLSLEEAKELQRVGVLNVLENPVKSIKTPLTHHDGSET

Homology

[Close]

BLAST of Cp4.1LG16g03460 vs. NCBI nr
Match: XP_023511842.1 (uncharacterized protein LOC111776740 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 570 bits (1470), Expect = 3.70e-205
Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0


Query: 1   MVQKSIDSKFSEYGHGNSGKDVPSQEKQMQISAKKTALRDLQNDNRVTASHCTGSSPLLK 60
           MVQKSIDSKFSEYGHGNSGKDVPSQEKQMQISAKKTALRDLQNDNRVTASHCTGSSPLLK
Sbjct: 1   MVQKSIDSKFSEYGHGNSGKDVPSQEKQMQISAKKTALRDLQNDNRVTASHCTGSSPLLK 60

Query: 61  ERGPSSDFIKVSGNNPATPSHLHSSTSNASNGHLVYVRRKSEVDIGKNSPCDSTNMKGDY 120
           ERGPSSDFIKVSGNNPATPSHLHSSTSNASNGHLVYVRRKSEVDIGKNSPCDSTNMKGDY
Sbjct: 61  ERGPSSDFIKVSGNNPATPSHLHSSTSNASNGHLVYVRRKSEVDIGKNSPCDSTNMKGDY 120

Query: 121 PNLSKLGQLAETAHLKSQVKELQNHCFPAFAPFPMVSPMNASGKPSVPHHVGKYGINFAT 180
           PNLSKLGQLAETAHLKSQVKELQNHCFPAFAPFPMVSPMNASGKPSVPHHVGKYGINFAT
Sbjct: 121 PNLSKLGQLAETAHLKSQVKELQNHCFPAFAPFPMVSPMNASGKPSVPHHVGKYGINFAT 180

Query: 181 AESNFHPAPSTVPSGWKNLQWEDRYHQLQLLLHKLDQSDQQDYLQVLRSLSSVELSRHAV 240
           AESNFHPAPSTVPSGWKNLQWEDRYHQLQLLLHKLDQSDQQDYLQVLRSLSSVELSRHAV
Sbjct: 181 AESNFHPAPSTVPSGWKNLQWEDRYHQLQLLLHKLDQSDQQDYLQVLRSLSSVELSRHAV 240

Query: 241 ELERRSIQLSLEEAKELQRVGVLNVLENPVKSIKTPLTHHDGSET 285
           ELERRSIQLSLEEAKELQRVGVLNVLENPVKSIKTPLTHHDGSET
Sbjct: 241 ELERRSIQLSLEEAKELQRVGVLNVLENPVKSIKTPLTHHDGSET 285

[Close]

BLAST of Cp4.1LG16g03460 vs. NCBI nr
Match: XP_022943750.1 (uncharacterized protein LOC111448407 [Cucurbita moschata] >KAG7010816.1 hypothetical protein SDJN02_27612, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 553 bits (1424), Expect = 3.81e-198
Identity = 277/285 (97.19%), Postives = 281/285 (98.60%), Query Frame = 0


Query: 1   MVQKSIDSKFSEYGHGNSGKDVPSQEKQMQISAKKTALRDLQNDNRVTASHCTGSSPLLK 60
           MVQKSIDSKFSEYGHGNSGKDVPSQEKQ+QISAKKTALRDLQNDNRVTAS+CTGSSPLLK
Sbjct: 1   MVQKSIDSKFSEYGHGNSGKDVPSQEKQLQISAKKTALRDLQNDNRVTASNCTGSSPLLK 60

Query: 61  ERGPSSDFIKVSGNNPATPSHLHSSTSNASNGHLVYVRRKSEVDIGKNSPCDSTNMKGDY 120
           ERGPSSDFIKVSGNNPATPSHLHSSTSNASNGHLVYVRRKSE DIGKNSPCDSTN+KGDY
Sbjct: 61  ERGPSSDFIKVSGNNPATPSHLHSSTSNASNGHLVYVRRKSEADIGKNSPCDSTNIKGDY 120

Query: 121 PNLSKLGQLAETAHLKSQVKELQNHCFPAFAPFPMVSPMNASGKPSVPHHVGKYGINFAT 180
           PNLSKLGQLAETAHLKSQVKELQ  CFPAFAPFPMVSPMNASGKPSVPHHVGKYGINFAT
Sbjct: 121 PNLSKLGQLAETAHLKSQVKELQTRCFPAFAPFPMVSPMNASGKPSVPHHVGKYGINFAT 180

Query: 181 AESNFHPAPSTVPSGWKNLQWEDRYHQLQLLLHKLDQSDQQDYLQVLRSLSSVELSRHAV 240
           AESNFHPAPSTVPSGWKNLQWEDRYHQLQLLL+KLDQSDQQDYLQVLRSLSSVELSRHAV
Sbjct: 181 AESNFHPAPSTVPSGWKNLQWEDRYHQLQLLLNKLDQSDQQDYLQVLRSLSSVELSRHAV 240

Query: 241 ELERRSIQLSLEEAKELQRVGVLNVLENPVKSIKTPLTHHDGSET 285
           ELERRSIQLSLEEAKELQRVGVLNVL NPVKSIKTPLTHHDGSET
Sbjct: 241 ELERRSIQLSLEEAKELQRVGVLNVLGNPVKSIKTPLTHHDGSET 285

[Close]

BLAST of Cp4.1LG16g03460 vs. NCBI nr
Match: KAG6570979.1 (hypothetical protein SDJN03_29894, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 553 bits (1424), Expect = 2.89e-197
Identity = 277/285 (97.19%), Postives = 281/285 (98.60%), Query Frame = 0


Query: 1   MVQKSIDSKFSEYGHGNSGKDVPSQEKQMQISAKKTALRDLQNDNRVTASHCTGSSPLLK 60
           MVQKSIDSKFSEYGHGNSGKDVPSQEKQ+QISAKKTALRDLQNDNRVTAS+CTGSSPLLK
Sbjct: 16  MVQKSIDSKFSEYGHGNSGKDVPSQEKQLQISAKKTALRDLQNDNRVTASNCTGSSPLLK 75

Query: 61  ERGPSSDFIKVSGNNPATPSHLHSSTSNASNGHLVYVRRKSEVDIGKNSPCDSTNMKGDY 120
           ERGPSSDFIKVSGNNPATPSHLHSSTSNASNGHLVYVRRKSE DIGKNSPCDSTN+KGDY
Sbjct: 76  ERGPSSDFIKVSGNNPATPSHLHSSTSNASNGHLVYVRRKSEADIGKNSPCDSTNIKGDY 135

Query: 121 PNLSKLGQLAETAHLKSQVKELQNHCFPAFAPFPMVSPMNASGKPSVPHHVGKYGINFAT 180
           PNLSKLGQLAETAHLKSQVKELQ  CFPAFAPFPMVSPMNASGKPSVPHHVGKYGINFAT
Sbjct: 136 PNLSKLGQLAETAHLKSQVKELQTRCFPAFAPFPMVSPMNASGKPSVPHHVGKYGINFAT 195

Query: 181 AESNFHPAPSTVPSGWKNLQWEDRYHQLQLLLHKLDQSDQQDYLQVLRSLSSVELSRHAV 240
           AESNFHPAPSTVPSGWKNLQWEDRYHQLQLLL+KLDQSDQQDYLQVLRSLSSVELSRHAV
Sbjct: 196 AESNFHPAPSTVPSGWKNLQWEDRYHQLQLLLNKLDQSDQQDYLQVLRSLSSVELSRHAV 255

Query: 241 ELERRSIQLSLEEAKELQRVGVLNVLENPVKSIKTPLTHHDGSET 285
           ELERRSIQLSLEEAKELQRVGVLNVL NPVKSIKTPLTHHDGSET
Sbjct: 256 ELERRSIQLSLEEAKELQRVGVLNVLGNPVKSIKTPLTHHDGSET 300

[Close]

BLAST of Cp4.1LG16g03460 vs. NCBI nr
Match: XP_022986425.1 (uncharacterized protein LOC111484175 [Cucurbita maxima])

HSP 1 Score: 550 bits (1418), Expect = 3.13e-197
Identity = 275/285 (96.49%), Postives = 281/285 (98.60%), Query Frame = 0


Query: 1   MVQKSIDSKFSEYGHGNSGKDVPSQEKQMQISAKKTALRDLQNDNRVTASHCTGSSPLLK 60
           MVQKSIDSKFSEYGHGNSGKDVPSQEKQ+QISAKKTALRDLQNDNRVTAS+CTGSSPLLK
Sbjct: 1   MVQKSIDSKFSEYGHGNSGKDVPSQEKQLQISAKKTALRDLQNDNRVTASNCTGSSPLLK 60

Query: 61  ERGPSSDFIKVSGNNPATPSHLHSSTSNASNGHLVYVRRKSEVDIGKNSPCDSTNMKGDY 120
           ERGPSSDFIKVSGNNPATPSHLHSSTSNASNGHLVYVRRKS+ DIGKNSPCDSTN+KGDY
Sbjct: 61  ERGPSSDFIKVSGNNPATPSHLHSSTSNASNGHLVYVRRKSDADIGKNSPCDSTNIKGDY 120

Query: 121 PNLSKLGQLAETAHLKSQVKELQNHCFPAFAPFPMVSPMNASGKPSVPHHVGKYGINFAT 180
           PNLSKLGQLAETAHLKSQVKELQNHCFPAFAPFPMVSPMNASGKPSVPHHVGKYGINF T
Sbjct: 121 PNLSKLGQLAETAHLKSQVKELQNHCFPAFAPFPMVSPMNASGKPSVPHHVGKYGINFTT 180

Query: 181 AESNFHPAPSTVPSGWKNLQWEDRYHQLQLLLHKLDQSDQQDYLQVLRSLSSVELSRHAV 240
           AESNFHPAPSTVPSGWKNLQWEDRYHQLQLLL+KLDQSDQQDYLQVLRSLSSVELSRHAV
Sbjct: 181 AESNFHPAPSTVPSGWKNLQWEDRYHQLQLLLNKLDQSDQQDYLQVLRSLSSVELSRHAV 240

Query: 241 ELERRSIQLSLEEAKELQRVGVLNVLENPVKSIKTPLTHHDGSET 285
           ELERRSIQLSLEEAKELQRVGVLNVL NPVKSIKTPLTH +GSET
Sbjct: 241 ELERRSIQLSLEEAKELQRVGVLNVLGNPVKSIKTPLTHQNGSET 285

[Close]

BLAST of Cp4.1LG16g03460 vs. NCBI nr
Match: XP_038878250.1 (uncharacterized protein LOC120070536 [Benincasa hispida])

HSP 1 Score: 487 bits (1254), Expect = 4.60e-172
Identity = 252/296 (85.14%), Postives = 263/296 (88.85%), Query Frame = 0


Query: 1   MVQKSIDSKFSEYGHGNSGKDVPSQEKQMQISAKKTALRDLQNDNRVTASHCTGSSPLLK 60
           MVQKSIDSKFSEYGHGNSGKDV SQEKQ+QISAKKTALRDLQNDNR+TAS+C GSSPLLK
Sbjct: 1   MVQKSIDSKFSEYGHGNSGKDVSSQEKQLQISAKKTALRDLQNDNRITASNCPGSSPLLK 60

Query: 61  ERGPSSDFIKVSGNN------PATPSHLHSSTSNASNGHLVYVRRKSEVDIGKNSPCDST 120
           ERG SSD IKVSGN       PA+PSHLHSS SNA+NGHLVYVRRKS+ DIGKNSPC +T
Sbjct: 61  ERGTSSDIIKVSGNKRASPVCPASPSHLHSSPSNAANGHLVYVRRKSDADIGKNSPCGNT 120

Query: 121 NMKGDYPNLSKLGQLAETAHLKSQVKELQNHCFPAFAPFPMVSPMNASGKPSVPHHVGKY 180
           + K DYPNL KLGQLAETAHLKSQVKELQNHCF AFAPFPMVSPMNA GKPSVPHHVGK 
Sbjct: 121 STKADYPNLHKLGQLAETAHLKSQVKELQNHCFQAFAPFPMVSPMNAPGKPSVPHHVGKC 180

Query: 181 GINFATAESNFHPAPSTVPS-----GWKNLQWEDRYHQLQLLLHKLDQSDQQDYLQVLRS 240
           G N ATAESNF  APST PS     GWKNLQWEDRYHQLQLLL+KLDQSDQQDYLQVLRS
Sbjct: 181 GTNLATAESNFRSAPSTAPSVGIPTGWKNLQWEDRYHQLQLLLNKLDQSDQQDYLQVLRS 240

Query: 241 LSSVELSRHAVELERRSIQLSLEEAKELQRVGVLNVLENPVKSIKTPLTHHDGSET 285
           LSSVELSRHAVELE+RSIQLSLEEAKELQRVGVLNVL NPVK+IK PLTH DGSET
Sbjct: 241 LSSVELSRHAVELEKRSIQLSLEEAKELQRVGVLNVLGNPVKNIKAPLTHQDGSET 296

[Close]

BLAST of Cp4.1LG16g03460 vs. ExPASy TrEMBL
Match: A0A6J1FY79 (uncharacterized protein LOC111448407 OS=Cucurbita moschata OX=3662 GN=LOC111448407 PE=4 SV=1)

HSP 1 Score: 553 bits (1424), Expect = 1.85e-198
Identity = 277/285 (97.19%), Postives = 281/285 (98.60%), Query Frame = 0


Query: 1   MVQKSIDSKFSEYGHGNSGKDVPSQEKQMQISAKKTALRDLQNDNRVTASHCTGSSPLLK 60
           MVQKSIDSKFSEYGHGNSGKDVPSQEKQ+QISAKKTALRDLQNDNRVTAS+CTGSSPLLK
Sbjct: 1   MVQKSIDSKFSEYGHGNSGKDVPSQEKQLQISAKKTALRDLQNDNRVTASNCTGSSPLLK 60

Query: 61  ERGPSSDFIKVSGNNPATPSHLHSSTSNASNGHLVYVRRKSEVDIGKNSPCDSTNMKGDY 120
           ERGPSSDFIKVSGNNPATPSHLHSSTSNASNGHLVYVRRKSE DIGKNSPCDSTN+KGDY
Sbjct: 61  ERGPSSDFIKVSGNNPATPSHLHSSTSNASNGHLVYVRRKSEADIGKNSPCDSTNIKGDY 120

Query: 121 PNLSKLGQLAETAHLKSQVKELQNHCFPAFAPFPMVSPMNASGKPSVPHHVGKYGINFAT 180
           PNLSKLGQLAETAHLKSQVKELQ  CFPAFAPFPMVSPMNASGKPSVPHHVGKYGINFAT
Sbjct: 121 PNLSKLGQLAETAHLKSQVKELQTRCFPAFAPFPMVSPMNASGKPSVPHHVGKYGINFAT 180

Query: 181 AESNFHPAPSTVPSGWKNLQWEDRYHQLQLLLHKLDQSDQQDYLQVLRSLSSVELSRHAV 240
           AESNFHPAPSTVPSGWKNLQWEDRYHQLQLLL+KLDQSDQQDYLQVLRSLSSVELSRHAV
Sbjct: 181 AESNFHPAPSTVPSGWKNLQWEDRYHQLQLLLNKLDQSDQQDYLQVLRSLSSVELSRHAV 240

Query: 241 ELERRSIQLSLEEAKELQRVGVLNVLENPVKSIKTPLTHHDGSET 285
           ELERRSIQLSLEEAKELQRVGVLNVL NPVKSIKTPLTHHDGSET
Sbjct: 241 ELERRSIQLSLEEAKELQRVGVLNVLGNPVKSIKTPLTHHDGSET 285

[Close]

BLAST of Cp4.1LG16g03460 vs. ExPASy TrEMBL
Match: A0A6J1JE12 (uncharacterized protein LOC111484175 OS=Cucurbita maxima OX=3661 GN=LOC111484175 PE=4 SV=1)

HSP 1 Score: 550 bits (1418), Expect = 1.52e-197
Identity = 275/285 (96.49%), Postives = 281/285 (98.60%), Query Frame = 0


Query: 1   MVQKSIDSKFSEYGHGNSGKDVPSQEKQMQISAKKTALRDLQNDNRVTASHCTGSSPLLK 60
           MVQKSIDSKFSEYGHGNSGKDVPSQEKQ+QISAKKTALRDLQNDNRVTAS+CTGSSPLLK
Sbjct: 1   MVQKSIDSKFSEYGHGNSGKDVPSQEKQLQISAKKTALRDLQNDNRVTASNCTGSSPLLK 60

Query: 61  ERGPSSDFIKVSGNNPATPSHLHSSTSNASNGHLVYVRRKSEVDIGKNSPCDSTNMKGDY 120
           ERGPSSDFIKVSGNNPATPSHLHSSTSNASNGHLVYVRRKS+ DIGKNSPCDSTN+KGDY
Sbjct: 61  ERGPSSDFIKVSGNNPATPSHLHSSTSNASNGHLVYVRRKSDADIGKNSPCDSTNIKGDY 120

Query: 121 PNLSKLGQLAETAHLKSQVKELQNHCFPAFAPFPMVSPMNASGKPSVPHHVGKYGINFAT 180
           PNLSKLGQLAETAHLKSQVKELQNHCFPAFAPFPMVSPMNASGKPSVPHHVGKYGINF T
Sbjct: 121 PNLSKLGQLAETAHLKSQVKELQNHCFPAFAPFPMVSPMNASGKPSVPHHVGKYGINFTT 180

Query: 181 AESNFHPAPSTVPSGWKNLQWEDRYHQLQLLLHKLDQSDQQDYLQVLRSLSSVELSRHAV 240
           AESNFHPAPSTVPSGWKNLQWEDRYHQLQLLL+KLDQSDQQDYLQVLRSLSSVELSRHAV
Sbjct: 181 AESNFHPAPSTVPSGWKNLQWEDRYHQLQLLLNKLDQSDQQDYLQVLRSLSSVELSRHAV 240

Query: 241 ELERRSIQLSLEEAKELQRVGVLNVLENPVKSIKTPLTHHDGSET 285
           ELERRSIQLSLEEAKELQRVGVLNVL NPVKSIKTPLTH +GSET
Sbjct: 241 ELERRSIQLSLEEAKELQRVGVLNVLGNPVKSIKTPLTHQNGSET 285

[Close]

BLAST of Cp4.1LG16g03460 vs. ExPASy TrEMBL
Match: A0A6J1CFY6 (uncharacterized protein LOC111011167 OS=Momordica charantia OX=3673 GN=LOC111011167 PE=4 SV=1)

HSP 1 Score: 471 bits (1213), Expect = 3.78e-166
Identity = 245/296 (82.77%), Postives = 259/296 (87.50%), Query Frame = 0


Query: 1   MVQKSIDSKFSEYGHGNSGKDVPSQEKQMQISAKKTALRDLQNDNRVTASHCTGSSPLLK 60
           MVQK IDSKFSEYGHGNSGKDVP  EKQ+QISAKKTALRDLQN+NRVTAS+CTGS PLLK
Sbjct: 1   MVQKPIDSKFSEYGHGNSGKDVPH-EKQLQISAKKTALRDLQNENRVTASNCTGSFPLLK 60

Query: 61  ERGPSSDFIKVSGNN------PATPSHLHSSTSNASNGHLVYVRRKSEVDIGKNSPCDST 120
           E GP SDFIKVS N       P +P HLHSSTSNA+NGHLVYVRRKS+ DIGKNSP DST
Sbjct: 61  EGGPGSDFIKVSANKRPSTVCPTSPPHLHSSTSNAANGHLVYVRRKSDADIGKNSPGDST 120

Query: 121 NMKGDYPNLSKLGQLAETAHLKSQVKELQNHCFPAFAPFPMVSPMNASGKPSVPHHVGKY 180
           ++K DYPNLSKLGQL ET HLKSQVKEL+NHCFPAFAPFP+V PMNASG PSVPHH+GKY
Sbjct: 121 SIKADYPNLSKLGQLDETVHLKSQVKELKNHCFPAFAPFPVVPPMNASGTPSVPHHIGKY 180

Query: 181 GINFATAESNFHPAPSTVPS-----GWKNLQWEDRYHQLQLLLHKLDQSDQQDYLQVLRS 240
           GIN ATAESNFH A STVPS     GWKNLQWEDRYHQLQLLL+KLDQSDQQDYLQVLRS
Sbjct: 181 GINLATAESNFHSALSTVPSVGIPPGWKNLQWEDRYHQLQLLLNKLDQSDQQDYLQVLRS 240

Query: 241 LSSVELSRHAVELERRSIQLSLEEAKELQRVGVLNVLENPVKSIKTPLTHHDGSET 285
           LSSVELSRHAV LE+RSIQLSLEEAKELQRVGVLNVL NP K+IK PL H DGSET
Sbjct: 241 LSSVELSRHAVALEKRSIQLSLEEAKELQRVGVLNVLGNPGKNIKVPLAHQDGSET 295

[Close]

BLAST of Cp4.1LG16g03460 vs. ExPASy TrEMBL
Match: A0A6J1G8C0 (uncharacterized protein LOC111451757 OS=Cucurbita moschata OX=3662 GN=LOC111451757 PE=4 SV=1)

HSP 1 Score: 404 bits (1037), Expect = 1.15e-139
Identity = 219/290 (75.52%), Postives = 239/290 (82.41%), Query Frame = 0


Query: 1   MVQKSIDSKFSEYGHGNSGKDVPSQEKQMQISAKKTALRDLQNDNRVTASHCTGSSPLLK 60
           MVQKSIDSK S     NSGK+ P+ EKQ+QISAKKTALRDLQNDNRV AS+CTGSSPLLK
Sbjct: 1   MVQKSIDSKLS-----NSGKESPAHEKQLQISAKKTALRDLQNDNRVVASNCTGSSPLLK 60

Query: 61  ERGPSSDFIKVSGNNP------ATPSHLHSSTSNASNGHLVYVRRKSEVDIGKNSPCDST 120
           ERGPSSDFIKVSGNN        +P  L SSTSN + GHLVY+RRKS+ DI K+SPCDS+
Sbjct: 61  ERGPSSDFIKVSGNNKPSPVFTTSPPRLVSSTSNTTTGHLVYIRRKSDADIAKSSPCDSS 120

Query: 121 NMKGDYPNLSKLGQLAETAHLKSQVKELQNHCFPAFAPFPMVSPMNASGKPSVPHHVGKY 180
           ++K DY   SKLGQLAET HLKSQVKELQ+HCFPAFAPF MVSPMNASGKPSVPH   KY
Sbjct: 121 SIKADYQ--SKLGQLAETVHLKSQVKELQDHCFPAFAPFTMVSPMNASGKPSVPH---KY 180

Query: 181 GINFATAESNFHPAPSTVPSGWKNLQWEDRYHQLQLLLHKLDQSDQQDYLQVLRSLSSVE 240
           GIN ATAES+F  A       WKNLQWE RYHQL+LLL+KL+QSDQQDYLQVLRSLSSVE
Sbjct: 181 GINLATAESDFDSAE------WKNLQWEHRYHQLELLLNKLNQSDQQDYLQVLRSLSSVE 240

Query: 241 LSRHAVELERRSIQLSLEEAKELQRVGVLNVLENPVKSIKTPLTHHDGSE 284
           LSRHAVELE+RSI LS EEAKELQRVGVLNVL NPV +IK PL H DGS+
Sbjct: 241 LSRHAVELEKRSIHLSFEEAKELQRVGVLNVLGNPVNNIKVPLAHQDGSD 274

[Close]

BLAST of Cp4.1LG16g03460 vs. ExPASy TrEMBL
Match: A0A0A0KAB4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G118870 PE=4 SV=1)

HSP 1 Score: 402 bits (1034), Expect = 3.01e-138
Identity = 209/264 (79.17%), Postives = 225/264 (85.23%), Query Frame = 0


Query: 1   MVQKSIDSKFSEYGHGNSGKDVPSQEKQMQISAKKTALRDLQNDNRVTASHCTGSSPLLK 60
           MVQKSIDSKFSEYGHGN GKDVPSQEKQ+QISAKKTA RDLQNDN   AS+CTGSSPLLK
Sbjct: 1   MVQKSIDSKFSEYGHGNFGKDVPSQEKQLQISAKKTASRDLQNDNMAIASNCTGSSPLLK 60

Query: 61  ERGPSSDFIKVSGNN------PATPSHLHSSTSNASNGHLVYVRRKSEVDIGKNSPCDST 120
           E G  SD IKVSGN       PA+PSHLHSSTSN++NGHLVYVRRKS+ DIGKNS CD+T
Sbjct: 61  EIGTGSDIIKVSGNKRALPVYPASPSHLHSSTSNSANGHLVYVRRKSDADIGKNSSCDNT 120

Query: 121 NMKGDYPNLSKLGQLAETAHLKSQVKELQNHCFPAFAPFPMVSPMNASGKPSVPHHVGKY 180
           ++K +YPNL+KLG LA T HLKSQ KELQNHC  AFAPFPMVS +NA  KPSVPHH+GK 
Sbjct: 121 SIKANYPNLNKLGSLAVTVHLKSQAKELQNHCVQAFAPFPMVSSVNAPRKPSVPHHMGKC 180

Query: 181 GINFATAESNFHPAPSTVPS-----GWKNLQWEDRYHQLQLLLHKLDQSDQQDYLQVLRS 240
           GIN A AESNFH APST PS     GWKNLQWEDRYHQLQLLL+KLDQSDQ+DYLQVL S
Sbjct: 181 GINLAVAESNFHSAPSTFPSVGIPVGWKNLQWEDRYHQLQLLLNKLDQSDQRDYLQVLGS 240

Query: 241 LSSVELSRHAVELERRSIQLSLEE 253
           LSSVELSRHAVELE+RSIQLSLEE
Sbjct: 241 LSSVELSRHAVELEKRSIQLSLEE 264

[Close]

BLAST of Cp4.1LG16g03460 vs. TAIR 10
Match: AT2G45250.1 (Integral membrane protein hemolysin-III homolog )

HSP 1 Score: 101.3 bits (251), Expect = 1.3e-21
Identity = 76/191 (39.79%), Postives = 102/191 (53.40%), Query Frame = 0


Query: 85  STSNASNGHLVYVRRKSEVDIGKNSPCDSTNMKGDYPNLSKLGQLAETAHLKSQVKELQN 144
           +T+NA++G LVYVRR+ EVD  K +   +TN     PN                      
Sbjct: 64  ATTNAASGRLVYVRRRVEVDTSK-AAASTTN-----PN---------------------- 123

Query: 145 HCFPAFAPFPMVSPMNASGKPSVPHHVGKYGINFATAESNFHPAPSTVPSGWKNLQWEDR 204
                  P P  +P      P             A A++   P P++       L WE+R
Sbjct: 124 -------PPPTKAPPQIPSSP-------------AQAQAQ-EPTPTS-----HKLDWEER 183

Query: 205 YHQLQLLLHKLDQSDQQDYLQVLRSLSSVELSRHAVELERRSIQLSLEEAKELQRVGVLN 264
           Y  LQ+LL+KL+QSD+ D++Q+L SLSS ELS+HAV+LE+RSIQ SLEEA+E+QRV  LN
Sbjct: 184 YLHLQMLLNKLNQSDRTDHVQMLWSLSSAELSKHAVDLEKRSIQFSLEEAREMQRVAALN 200

Query: 265 VLENPVKSIKT 276
           VL   V SIK+
Sbjct: 244 VLGRSVNSIKS 200

[Close]

BLAST of Cp4.1LG16g03460 vs. TAIR 10
Match: AT4G38280.1 (BEST Arabidopsis thaliana protein match is: Integral membrane protein hemolysin-III homolog (TAIR:AT2G45250.1); Has 65 Blast hits to 65 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 97.8 bits (242), Expect = 1.5e-20
Identity = 76/216 (35.19%), Postives = 108/216 (50.00%), Query Frame = 0


Query: 60  KERGPSSDFIKVSGNNPATPSHLHSSTSNASNGHLVYVRRKSEVDIGKNSPCDSTNMKGD 119
           K+   +++   VS      P     +T+NA++G LVYVRR+ EVD  K +   +TN    
Sbjct: 9   KDSEKANEQDSVSSIGAKKPPLESPATTNAASGRLVYVRRRVEVDTSK-AAASTTN---- 68

Query: 120 YPNLSKLGQLAETAHLKSQVKELQNHCFPAFAPFPMVSPMNASGKPSVPHHVGKYGINFA 179
            PN                             P P  +P+     P+             
Sbjct: 69  -PN-----------------------------PPPTKAPLQIPSSPAQ------------ 128

Query: 180 TAESNFHPAPSTVPSGWKNLQWEDRYHQLQLLLHKLDQSDQQDYLQVLRSLSSVELSRHA 239
                  P P++       L WE+RY  LQ+LL+KL+QSD+ D++Q+L SLSS ELS+HA
Sbjct: 129 ------EPTPTS-----HKLDWEERYLHLQMLLNKLNQSDRTDHVQMLWSLSSAELSKHA 166

Query: 240 VELERRSIQLSLEEAKELQRVGVLNVLENPVKSIKT 276
           V+LE+RSIQ SLEEA+E+QRV  LN+L   V S+K+
Sbjct: 189 VDLEKRSIQFSLEEAREMQRVAALNMLGRSVNSLKS 166

[Close]

BLAST of Cp4.1LG16g03460 vs. TAIR 10
Match: AT2G45250.2 (Integral membrane protein hemolysin-III homolog )

HSP 1 Score: 78.6 bits (192), Expect = 9.2e-15
Identity = 63/169 (37.28%), Postives = 86/169 (50.89%), Query Frame = 0


Query: 85  STSNASNGHLVYVRRKSEVDIGKNSPCDSTNMKGDYPNLSKLGQLAETAHLKSQVKELQN 144
           +T+NA++G LVYVRR+ EVD  K +   +TN     PN                      
Sbjct: 64  ATTNAASGRLVYVRRRVEVDTSK-AAASTTN-----PN---------------------- 123

Query: 145 HCFPAFAPFPMVSPMNASGKPSVPHHVGKYGINFATAESNFHPAPSTVPSGWKNLQWEDR 204
                  P P  +P      P             A A++   P P++       L WE+R
Sbjct: 124 -------PPPTKAPPQIPSSP-------------AQAQAQ-EPTPTS-----HKLDWEER 178

Query: 205 YHQLQLLLHKLDQSDQQDYLQVLRSLSSVELSRHAVELERRSIQLSLEE 254
           Y  LQ+LL+KL+QSD+ D++Q+L SLSS ELS+HAV+LE+RSIQ SLEE
Sbjct: 184 YLHLQMLLNKLNQSDRTDHVQMLWSLSSAELSKHAVDLEKRSIQFSLEE 178

The following BLAST results are available for this feature:

BLAST of Cp4.1LG16g03460 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG16g03460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023511842.1	3.70e-205	100.00	uncharacterized protein LOC111776740 [Cucurbita pepo subsp. pepo]	[more]
XP_022943750.1	3.81e-198	97.19	uncharacterized protein LOC111448407 [Cucurbita moschata] >KAG7010816.1 hypothet...	[more]
KAG6570979.1	2.89e-197	97.19	hypothetical protein SDJN03_29894, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022986425.1	3.13e-197	96.49	uncharacterized protein LOC111484175 [Cucurbita maxima]	[more]
XP_038878250.1	4.60e-172	85.14	uncharacterized protein LOC120070536 [Benincasa hispida]	[more]

BLAST of Cp4.1LG16g03460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FY79	1.85e-198	97.19	uncharacterized protein LOC111448407 OS=Cucurbita moschata OX=3662 GN=LOC1114484...	[more]
A0A6J1JE12	1.52e-197	96.49	uncharacterized protein LOC111484175 OS=Cucurbita maxima OX=3661 GN=LOC111484175...	[more]
A0A6J1CFY6	3.78e-166	82.77	uncharacterized protein LOC111011167 OS=Momordica charantia OX=3673 GN=LOC111011...	[more]
A0A6J1G8C0	1.15e-139	75.52	uncharacterized protein LOC111451757 OS=Cucurbita moschata OX=3662 GN=LOC1114517...	[more]
A0A0A0KAB4	3.01e-138	79.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G118870 PE=4 SV=1	[more]

BLAST of Cp4.1LG16g03460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45250.1	1.3e-21	39.79	Integral membrane protein hemolysin-III homolog	[more]
AT4G38280.1	1.5e-20	35.19	BEST Arabidopsis thaliana protein match is: Integral membrane protein hemolysin-...	[more]
AT2G45250.2	9.2e-15	37.28	Integral membrane protein hemolysin-III homolog	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018737	Protein LIN52	PFAM	PF10044	LIN52	coord: 209..266 e-value: 1.2E-4 score: 22.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..55
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..93
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..93
None	No IPR available	PANTHER	PTHR34555	INTEGRAL MEMBRANE HEMOLYSIN-III-LIKE PROTEIN	coord: 1..275
None	No IPR available	PANTHER	PTHR34555:SF1	INTEGRAL MEMBRANE HEMOLYSIN-III-LIKE PROTEIN	coord: 1..275

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG16g03460.1	Cp4.1LG16g03460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0070176	DRM complex