Cp4.1LG16g03010 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG16g03010
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	protein XAP5 CIRCADIAN TIMEKEEPER
Location	Cp4.1LG16: 4928195 .. 4933019 (+)
RNA-Seq Expression	Cp4.1LG16g03010
Synteny	Cp4.1LG16g03010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAAAAATACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTAGGGTATTTAACCCCAAGTGCCATCTCCGATCAAGTCCGAAAGGCGGCAATTAGCTAGGAGGTGTAACGCAGGCCACACCGGCCACGACGGAAGGTAGGTCGGGAAAAAATGTCGGGCATGGGAGATGGGTACGTGGGCACTGCCCAAGACGCCGTCAGGATTCGCAGACTCGAGAAGCAAAGAGAAGCCGAGCGCCGGAAAATCCAGGAGCTGAAGGCCAAGACTGCCTCCGCCAAAGGACAGCCCGGTCTCCTTCAATTTGGCTCCAGTACCTCCGAGGTTCTTTTTCGATTTCCATCTTTAGGGCTACTTTCAACATTAGGATTTGTTTCAGAACTATCTCTAGTTCTTTAGTCTGTGGACCTGCAGTTAGGTTTTTTGAGGATAGGCGAGCGGAAACATGAGGAACCGAAGTATAGTTTTTCGATTTTTGAATCCACTATACATCTTTTCGAATTTGGACATCGCACGATCTTGGTTAGAAAGCTTGTCTGGAATTTTTAATTACTGTTCTTGGTAATTCAGATACTCGAGACAGCGTTCAAGAAGGAAACTGTTGGTTTGGTGACGAGAGAAGAGTATGTTGAGAAGGTAAAGTTAGAAAATATGATACAAGAACTTTTCCTTATACCGCTAAGAGAAGCATATGGCGCGTAATAAAGTTATAAACCGTTTGTTCTTGTTGATATAACTGTAGAGAGTGAATATTCGAAACAAAATTGAAGAGGAGGAGAAGGAGAAACTTCAAAAGCTACAACAAGAGTAAGTTGTTCTGTCTCTTGTTCATCTTCTATTGGAAAGACTTCGGCCGCCTTCCATTCATTGGTTTTTCCTCTGTTTTCAGGGAAGAGGAACTCCAATTGCAGAAGCGGAGGAAAAGGAAAATAAAGGGGAATTCACGACTGTCGTTTTCTGATGATTTCGAGAACGGAAGTGATGAGGATGACGATAATAGTAAGCGATTTTCTTGCTGAATCTGAAATAGTTGGTATTAGTGAACTTTTATTTACAATCAGCCGAGATCGATATACTTCATTCTAGAACGATGAGAATTATGTGGTATACATTGTATTCCATTTTAGAATAATAGTTTGAAGGAAATTGAATTCTCATGTCAATGCTAAGATGTTACTAGCCATGTCCACTTAATAATCCAAACTTGTGCTTATGCATCATAGAAGAGCCAAGAAAGATTGGGTGTGGCAAACTTGGGAAAGATCCTACAGTAGAGACTAGCTTTTTGCCTGATAGGTATGGCGTCTTTCATTCTCTCATCCTCCCTATATATTTTACATCTTTTATGGGATTAACGTTTTAGCTTAGGGGGGTTGAGGATTCTATTACAGTGAGAGGGAAGCTGAGGAGCAAGCTGAGCGTGAAAGGCTGAAGAAACAGTGGCTTCGGGAGCAGGAACAAATTCGAAGTAATCATATATTTGCCCGTGTATAGATTTCATGGTGGCATACAAGATAATTCGGTACCGAAAGAAATGACTAAATCTTTCCCTTGTATTGCAGATGAGCCTCTTGAAATCACTTACAGTTATTGGGATGGAGCTGGCCATAGGCGAGTCATTCAGGTTAATAATGATTATCTAACTTCGAACAATCTGTTTTCTTCTTGCTTCCTGAGCTCTACTTTTTAATGATTATCTAACTTTGAACAAATTCTCTATTGTTTTACTCTTTTAAATTCAACCTTGCATCATTCAGGCACGAAAAGGTGATACAATTGGAGAGTTTCTGAGGACTGTACAGCAGCAACTTGCCCCCGAGTTTCGGGAGATTAGGACTACCTCAGTAGAGAATTTGCTATATGTGAAAGAAGATCTTATAATACCCCATGTAATATAATTTGGAAATTTTTTGGGATATTATTTTGGTTTTTTCCGCTTGGTGACTGTACTGAGTATTTATTGTATCGTGCAGCAACATAGCTTCTATGAGCTTATTGTGAACAAAGCTAGAGGCAAAAGTGGCCCGGTAAGCCTTCTATTTGTAATTTGAAAATTTAATTCCTTCTCCACTGAATGCATTAAGAGTTCACATTTTTCTATGGTCAGGTGTCTTCAAGATATAATAATTTAAAACTTTGTTGTTTGCATGTCTCTGATATAGATTTCAGGTTTAATGATATTTAATACTCGTTATTGAAGATTAGGGTTTGGTGGGCTTGTTTTTTTGTGTACCCTTGTATCTTCTTTCTTATCTTTCAATAAAAACTTGGTTTCTCATTAGTATTTTTTTTTCGAACAATTTTGTTAAGTTTTTATTTAGGGTATCTTTGATAACCATTTGGTTTTTGGTTTTTGAAAATTAAGGTTATAAACGCTACTTTCACCCATGAGTTTATATGTTTGTTTATCTAAGAAAATAAGTTTTCAAAAAGTAAATAATTTGACTAGGAATTCAAGTGTTTCTGTAAGAAAAGTGAAAACCATAATTGAAAATTTTGGAGGAAACAAGCACAAATTTCAAAAATAGAAAACGAAAAACCAAATTGTTAGTGAATGGGGCTTACTGTCACTATTCTGTTTTCATGTACTTGCAATTGTGTTTATTTTTTATGTTTTTGTTATCAATTTTATGATGGGCTGAGAAATTTCGGCTTCTTGATAGTTAGCGGCTTTTAGAGTTTTTACGTTTGTTTATCTCATGTGAGCAAAAAACTGACTGACTTTTCACGTTGAGAGTGTATGTAACATGAGTGACATAAAAAAAGCAAAAACCCTGTTACATCTTGTACATGTCCAACACCATGTAACCTCTTGTCTTATTAAATTTGAGTGAACTTATTTTAGCATTTTGTTTCGATGTTGCTCAGCTTTTCCACTTTGACGTGCACGAGGATGTTCGGACAATTGCCGATGCAACAATAGAGAAGGATGAGGTATATTTTCAAATTGATTTTATATGCATGCGTCTTGTGATTGCTTGATATCGAAAGTTTAGTGAAGTCTGTGGAAACAGAGTGTATCTTTATATTCTTTAGTTAGTCGTGTGTACAAATTATTCGCCATGTTTACATGCTTCAGCCCTTGTTTTTGTTTTACAACGATGACAAATCTTGTGAGCTAATTACGGTATGATTTAGTTTGCTAATCCTTGTATCCTAGTGCACTTACTTCTACAATTTAGATGGTAGAGATCTCTTATATATCAATATTTCATTGTTTTGATGGAATATACCAGAAAAGAACAAAAAACTAGCGATTACAAAAGAAACTGGAAACAAAAGGCCCTTGTGTCTTATCAAATACAAAATATTATAAGCACTTGATACTATGGAGTTGCCATCTCTATGTTGTTTTTCTGCTCCTTTGCGAGGTTTGATCAAACCCGTGTTGCAACTTGAAAAAAGTGTGTCAAGAAGAGTGCACTTAAGTCCTAAAATTTCTTCTTCCTCCTATGGAGGATGGTAATAATAGTAGTATTATCAAGAGCTACAAGCCATATTCTTCTGTTCTGCATTAACAGAAAATTTTAGGATTTGTACAAAACAGAAGAAGATGCCTCTTCACATGTGAGATCTCATATCGGTTGGAGAGGAGAACGAAATATTTCTTCTAAAGGTGTGGAAACCTCTTCCTAACAAGTGCGTTTTAAAACTTCGAGAGGAAGCCCAGAAGGGGAAGCCTAAAGCGGACAATATCTACTAGTGGTGTGCTTGGACTATTACAAATGGTATCAGAGCCAGACACTGAGTGGTGTGTCAATGAGGATGTCCTGGATCCCAAGGGGGTGGACTGTCAGATCCCACGTCGGTTGGAGAGGAGAACGAAATATTATTTATAAGGGTGTGGAAACTTTTATCTAACATAAGCGCTTTTTAAAACATTGAGGAAAGGAAAAGTTCAAAGATGACAATATTTGCTAACGGTGACTTAGACGGTTACCTCACAAGTTAACTACTATTATCGTTTTATAAATTCATCATTTGTATTACTTTTTTCTTGGACAGTCTCATGCTGGGAAAGTTGTTGAGAGGCACTGGTATGAGAAGAATAAGCACATCTTTCCTGCTTCAAGATGGGAGGTGAGCTATCTCTCTGGCTCTGCTCGTGAGCTTGATCGTGTGATTGTTCTCACAAACTTTAATCCCCTGACATACCATTCCCTGCTTTACCTATTTGTTGCAGATCTATGATCCAACCAAGAAATGGGAGCGGTACACCATCCACGGGGACTAATTCAATGACATATAGCAAAAGAAGTATGATTTATGCCTTGAATCCTCAGTTTTTCTTACTGCTGTCTTCTTATACACGCTGAGTATGTTCGAAATCTTGAAGCAATTTGAAGAAATTAACTGGCTGGCTAATGATGTGCATTGTGTTATTTAAGCATTTAGCCTGTAGGATTGAGATGTTCATATTGTTCAGCACTTTGGCTTCAGAAACTTGTTTAGGGTGGGTGGATCTTCCATTGATGTTGATCAATTTGCTTCAAATAGACTTTTAGTGTACCATAGAGGTGAAATATTTTAAGTCATCTATTTCATCTCTCAGTACTTTTAAGGGTGTTTGGTTGATGTTTATTAGATGAGAATGGGCAATTTTAAAAAAGTGACCTATTTGTTTGGTCCACATAGCAGGGTGGAGACGAAGATGGGAAGTATAATCTTGTCCTCGGCCCTCTAACCGGAATAAATGTTCTCTACTCCCTCCCCCATTTCTCGTCTAAACAGAGAATTTCCTCCACATTTAGGGCGGGTAATATGGATTTCTCTATTTGCTTTTGATTTTATATACAGT

mRNA sequence

GTAAAAATACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTAGGGTATTTAACCCCAAGTGCCATCTCCGATCAAGTCCGAAAGGCGGCAATTAGCTAGGAGGTGTAACGCAGGCCACACCGGCCACGACGGAAGGTAGGTCGGGAAAAAATGTCGGGCATGGGAGATGGGTACGTGGGCACTGCCCAAGACGCCGTCAGGATTCGCAGACTCGAGAAGCAAAGAGAAGCCGAGCGCCGGAAAATCCAGGAGCTGAAGGCCAAGACTGCCTCCGCCAAAGGACAGCCCGGTCTCCTTCAATTTGGCTCCAGTACCTCCGAGATACTCGAGACAGCGTTCAAGAAGGAAACTGTTGGTTTGGTGACGAGAGAAGAGTATGTTGAGAAGAGAGTGAATATTCGAAACAAAATTGAAGAGGAGGAGAAGGAGAAACTTCAAAAGCTACAACAAGAGGAAGAGGAACTCCAATTGCAGAAGCGGAGGAAAAGGAAAATAAAGGGGAATTCACGACTGTCGTTTTCTGATGATTTCGAGAACGGAAGTGATGAGGATGACGATAATAAAGAGCCAAGAAAGATTGGGTGTGGCAAACTTGGGAAAGATCCTACAGTAGAGACTAGCTTTTTGCCTGATAGTGAGAGGGAAGCTGAGGAGCAAGCTGAGCGTGAAAGGCTGAAGAAACAGTGGCTTCGGGAGCAGGAACAAATTCGAAATGAGCCTCTTGAAATCACTTACAGTTATTGGGATGGAGCTGGCCATAGGCGAGTCATTCAGGCACGAAAAGGTGATACAATTGGAGAGTTTCTGAGGACTGTACAGCAGCAACTTGCCCCCGAGTTTCGGGAGATTAGGACTACCTCAGTAGAGAATTTGCTATATGTGAAAGAAGATCTTATAATACCCCATCAACATAGCTTCTATGAGCTTATTGTGAACAAAGCTAGAGGCAAAAGTGGCCCGCTTTTCCACTTTGACGTGCACGAGGATGTTCGGACAATTGCCGATGCAACAATAGAGAAGGATGAGTCTCATGCTGGGAAAGTTGTTGAGAGGCACTGGTATGAGAAGAATAAGCACATCTTTCCTGCTTCAAGATGGGAGATCTATGATCCAACCAAGAAATGGGAGCGGTACACCATCCACGGGGACTAATTCAATGACATATAGCAAAAGAAGTATGATTTATGCCTTGAATCCTCAGTTTTTCTTACTGCTGTCTTCTTATACACGCTGAGTATGTTCGAAATCTTGAAGCAATTTGAAGAAATTAACTGGCTGGCTAATGATGTGCATTGTGTTATTTAAGCATTTAGCCTGTAGGATTGAGATGTTCATATTGTTCAGCACTTTGGCTTCAGAAACTTGTTTAGGGTGGGTGGATCTTCCATTGATGTTGATCAATTTGCTTCAAATAGACTTTTAGTGTACCATAGAGGGTGGAGACGAAGATGGGAAGTATAATCTTGTCCTCGGCCCTCTAACCGGAATAAATGTTCTCTACTCCCTCCCCCATTTCTCGTCTAAACAGAGAATTTCCTCCACATTTAGGGCGGGTAATATGGATTTCTCTATTTGCTTTTGATTTTATATACAGT

Coding sequence (CDS)

ATGTCGGGCATGGGAGATGGGTACGTGGGCACTGCCCAAGACGCCGTCAGGATTCGCAGACTCGAGAAGCAAAGAGAAGCCGAGCGCCGGAAAATCCAGGAGCTGAAGGCCAAGACTGCCTCCGCCAAAGGACAGCCCGGTCTCCTTCAATTTGGCTCCAGTACCTCCGAGATACTCGAGACAGCGTTCAAGAAGGAAACTGTTGGTTTGGTGACGAGAGAAGAGTATGTTGAGAAGAGAGTGAATATTCGAAACAAAATTGAAGAGGAGGAGAAGGAGAAACTTCAAAAGCTACAACAAGAGGAAGAGGAACTCCAATTGCAGAAGCGGAGGAAAAGGAAAATAAAGGGGAATTCACGACTGTCGTTTTCTGATGATTTCGAGAACGGAAGTGATGAGGATGACGATAATAAAGAGCCAAGAAAGATTGGGTGTGGCAAACTTGGGAAAGATCCTACAGTAGAGACTAGCTTTTTGCCTGATAGTGAGAGGGAAGCTGAGGAGCAAGCTGAGCGTGAAAGGCTGAAGAAACAGTGGCTTCGGGAGCAGGAACAAATTCGAAATGAGCCTCTTGAAATCACTTACAGTTATTGGGATGGAGCTGGCCATAGGCGAGTCATTCAGGCACGAAAAGGTGATACAATTGGAGAGTTTCTGAGGACTGTACAGCAGCAACTTGCCCCCGAGTTTCGGGAGATTAGGACTACCTCAGTAGAGAATTTGCTATATGTGAAAGAAGATCTTATAATACCCCATCAACATAGCTTCTATGAGCTTATTGTGAACAAAGCTAGAGGCAAAAGTGGCCCGCTTTTCCACTTTGACGTGCACGAGGATGTTCGGACAATTGCCGATGCAACAATAGAGAAGGATGAGTCTCATGCTGGGAAAGTTGTTGAGAGGCACTGGTATGAGAAGAATAAGCACATCTTTCCTGCTTCAAGATGGGAGATCTATGATCCAACCAAGAAATGGGAGCGGTACACCATCCACGGGGACTAA

Protein sequence

MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSEILETAFKKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEELQLQKRRKRKIKGNSRLSFSDDFENGSDEDDDNKEPRKIGCGKLGKDPTVETSFLPDSEREAEEQAERERLKKQWLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQLAPEFREIRTTSVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIADATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD

Homology

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BLAST of Cp4.1LG16g03010 vs. ExPASy Swiss-Prot
Match: Q8H110 (Protein XAP5 CIRCADIAN TIMEKEEPER OS=Arabidopsis thaliana OX=3702 GN=XCT PE=1 SV=1)

HSP 1 Score: 570.5 bits (1469), Expect = 1.3e-161
Identity = 295/337 (87.54%), Postives = 314/337 (93.18%), Query Frame = 0


Query: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSEILE 60
           MSGMGDGYVGTAQDAVRIRRL+KQREAER+KIQELK+K+AS   Q GLLQFG+S+ EIL+
Sbjct: 1   MSGMGDGYVGTAQDAVRIRRLQKQREAERKKIQELKSKSASGNDQSGLLQFGTSSCEILD 60

Query: 61  TAFKKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEELQLQKR-RKRKIKGNS 120
           TAFKKETVGLVTREEYVEKRVNIRNK EEEEKEKLQKLQQEEEELQL+KR +KRKIKG+S
Sbjct: 61  TAFKKETVGLVTREEYVEKRVNIRNKFEEEEKEKLQKLQQEEEELQLEKRNKKRKIKGSS 120

Query: 121 RLSFSDDFENGSDEDDDNKEPRKIG---CGKLGKDPTVETSFLPDSEREAEEQAERERLK 180
           RLSF++DFENGSDEDD   +    G   CGKLGKDP+VET+FLPDSEREAEEQAERERLK
Sbjct: 121 RLSFAEDFENGSDEDDGENKSSGTGNLRCGKLGKDPSVETNFLPDSEREAEEQAERERLK 180

Query: 181 KQWLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQLAPEFREIRTT 240
           KQWLREQEQI+NEPLEITYSYWDG GHRRVIQ RKGD IG FLR VQQQLAP+FREIRT 
Sbjct: 181 KQWLREQEQIKNEPLEITYSYWDGTGHRRVIQVRKGDPIGNFLRAVQQQLAPDFREIRTA 240

Query: 241 SVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIADATIEKDESHAG 300
           SVENLLYVKEDLIIPHQHSFYELI+NKARGKSGPLFHFDVHEDVRTIADATIEKDESHAG
Sbjct: 241 SVENLLYVKEDLIIPHQHSFYELIINKARGKSGPLFHFDVHEDVRTIADATIEKDESHAG 300

Query: 301 KVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 334
           KVVERHWYEKNKHIFPASRWEIYDPTKKWERYT+HGD
Sbjct: 301 KVVERHWYEKNKHIFPASRWEIYDPTKKWERYTVHGD 337

[Close]

BLAST of Cp4.1LG16g03010 vs. ExPASy Swiss-Prot
Match: B8BDW1 (Protein XAP5 CIRCADIAN TIMEKEEPER OS=Oryza sativa subsp. indica OX=39946 GN=XCT PE=3 SV=1)

HSP 1 Score: 562.0 bits (1447), Expect = 4.5e-159
Identity = 294/335 (87.76%), Postives = 313/335 (93.43%), Query Frame = 0


Query: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSEILE 60
           MSG GDGYVGTAQDAV+IRRLEKQREAERRKI+ELK K  S+ GQPGLLQFGSSTSEILE
Sbjct: 1   MSGFGDGYVGTAQDAVKIRRLEKQREAERRKIEELKNK--SSDGQPGLLQFGSSTSEILE 60

Query: 61  TAFKKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEELQLQKRRKRKIKGNSR 120
           TAFKKETVGLVTRE+YVEKRVNIR KIEEEEKEKLQKLQQEEEELQ+QKR+KR+++G+ R
Sbjct: 61  TAFKKETVGLVTREQYVEKRVNIRTKIEEEEKEKLQKLQQEEEELQMQKRKKRRVRGDPR 120

Query: 121 LSFSDDFENGSDEDD-DNKEP-RKIGCGKLGKDPTVETSFLPDSEREAEEQAERERLKKQ 180
           LSF D+ ENGSDED+ +N+EP +K G  KLGKDPTVETSFLPD EREAEEQAERERLKKQ
Sbjct: 121 LSFCDEIENGSDEDEFENQEPQKKHGPVKLGKDPTVETSFLPDREREAEEQAERERLKKQ 180

Query: 181 WLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQLAPEFREIRTTSV 240
           W REQE I+NEPL ITYSYWDG GHRRVIQ RKGD+IGEFLR VQQQLAPEFRE+RTTSV
Sbjct: 181 WSREQELIKNEPLTITYSYWDGTGHRRVIQVRKGDSIGEFLRAVQQQLAPEFREVRTTSV 240

Query: 241 ENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIADATIEKDESHAGKV 300
           ENLLYVKEDLIIPHQHSFYELI+NKARGKSGPLFHFDVHEDVRTIADAT EKDESHAGKV
Sbjct: 241 ENLLYVKEDLIIPHQHSFYELIINKARGKSGPLFHFDVHEDVRTIADATKEKDESHAGKV 300

Query: 301 VERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 334
           VERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD
Sbjct: 301 VERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 333

[Close]

BLAST of Cp4.1LG16g03010 vs. ExPASy Swiss-Prot
Match: Q69JZ7 (Protein XAP5 CIRCADIAN TIMEKEEPER OS=Oryza sativa subsp. japonica OX=39947 GN=XCT PE=2 SV=1)

HSP 1 Score: 562.0 bits (1447), Expect = 4.5e-159
Identity = 294/335 (87.76%), Postives = 313/335 (93.43%), Query Frame = 0


Query: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSEILE 60
           MSG GDGYVGTAQDAV+IRRLEKQREAERRKI+ELK K  S+ GQPGLLQFGSSTSEILE
Sbjct: 1   MSGFGDGYVGTAQDAVKIRRLEKQREAERRKIEELKNK--SSDGQPGLLQFGSSTSEILE 60

Query: 61  TAFKKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEELQLQKRRKRKIKGNSR 120
           TAFKKETVGLVTRE+YVEKRVNIR KIEEEEKEKLQKLQQEEEELQ+QKR+KR+++G+ R
Sbjct: 61  TAFKKETVGLVTREQYVEKRVNIRTKIEEEEKEKLQKLQQEEEELQMQKRKKRRVRGDPR 120

Query: 121 LSFSDDFENGSDEDD-DNKEP-RKIGCGKLGKDPTVETSFLPDSEREAEEQAERERLKKQ 180
           LSF D+ ENGSDED+ +N+EP +K G  KLGKDPTVETSFLPD EREAEEQAERERLKKQ
Sbjct: 121 LSFCDEIENGSDEDEFENQEPQKKHGPVKLGKDPTVETSFLPDREREAEEQAERERLKKQ 180

Query: 181 WLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQLAPEFREIRTTSV 240
           W REQE I+NEPL ITYSYWDG GHRRVIQ RKGD+IGEFLR VQQQLAPEFRE+RTTSV
Sbjct: 181 WSREQELIKNEPLTITYSYWDGTGHRRVIQVRKGDSIGEFLRAVQQQLAPEFREVRTTSV 240

Query: 241 ENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIADATIEKDESHAGKV 300
           ENLLYVKEDLIIPHQHSFYELI+NKARGKSGPLFHFDVHEDVRTIADAT EKDESHAGKV
Sbjct: 241 ENLLYVKEDLIIPHQHSFYELIINKARGKSGPLFHFDVHEDVRTIADATKEKDESHAGKV 300

Query: 301 VERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 334
           VERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD
Sbjct: 301 VERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 333

[Close]

BLAST of Cp4.1LG16g03010 vs. ExPASy Swiss-Prot
Match: Q28BK4 (Protein FAM50A OS=Xenopus tropicalis OX=8364 GN=fam50a PE=2 SV=2)

HSP 1 Score: 293.1 bits (749), Expect = 3.9e-78
Identity = 167/349 (47.85%), Postives = 235/349 (67.34%), Query Frame = 0


Query: 8   YVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAK-GQPGLLQFGSSTSEILETAFKKE 67
           Y G A +A R  +L K+RE +R +++++K K A     +  + +  S+  + +E   K  
Sbjct: 4   YKGAASEAGRAMQLMKKREKQREQLEQMKQKIAEENVVKANINKKFSAHYDAVEAELKSS 63

Query: 68  TVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEELQLQKRRKRKIKGNSR-----L 127
           TVGLVT  +   K+  +   ++E EK+  +K Q ++ +L+L+K+R+R+ K   +     L
Sbjct: 64  TVGLVTLNDMKAKQEAL---VKEREKQLAKKEQFKDLQLKLEKQRERERKKEQKRKIASL 123

Query: 128 SFS----------------DDFENGSDEDDDNKEPRKIGC----GKLGKDPTVETSFLPD 187
           SF+                DD E+  DEDDD+ +  K        KLGK+P V+TSFLPD
Sbjct: 124 SFNLEEDEECEDEEADDDYDDEEDDDDEDDDDDDAEKEELPKKKKKLGKNPDVDTSFLPD 183

Query: 188 SEREAEEQAERERLKKQWLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRT 247
            +RE EE   RE L+++W R+QE+I++E +EIT+SYWDG+GHRR ++ +KG++I +FL+ 
Sbjct: 184 RDREEEENRLREELRQEWERKQEKIKSEEIEITFSYWDGSGHRRTVKMKKGNSIQQFLQK 243

Query: 248 VQQQLAPEFREIRTTSVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVR 307
             + L  +F E+R+  VE L+Y+KEDLIIPH HSFY+ IV KARGKSGPLF+FDVHEDVR
Sbjct: 244 ALEILRKDFSELRSAGVEQLMYIKEDLIIPHHHSFYDFIVTKARGKSGPLFNFDVHEDVR 303

Query: 308 TIADATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTI 331
            ++DAT+EKDESHAGKVV R WYEKNKHIFPASRWE YDP KKW++YTI
Sbjct: 304 LLSDATVEKDESHAGKVVLRSWYEKNKHIFPASRWEPYDPEKKWDKYTI 349

[Close]

BLAST of Cp4.1LG16g03010 vs. ExPASy Swiss-Prot
Match: Q568K9 (Protein FAM50A OS=Danio rerio OX=7955 GN=fam50a PE=2 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 8.7e-78
Identity = 163/342 (47.66%), Postives = 234/342 (68.42%), Query Frame = 0


Query: 8   YVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAK-GQPGLLQFGSSTSEILETAFKKE 67
           Y G A +A R  +L K+RE ER ++++LK K A     +  + +  S+  + +E   K  
Sbjct: 4   YKGAASEAGRAMQLMKKREREREQLEQLKQKIAEDNMVKSNIDKKFSAHYDAVEQELKSS 63

Query: 68  TVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEELQLQKRRKRKIKGNSR-----L 127
           TVGLVT  +   K+  +   ++E EK+  +K Q +E +L+L+K++++K K   +     L
Sbjct: 64  TVGLVTLNDMKAKQEAL---VKEREKQLAKKEQSKELQLKLEKQKEKKRKEEQKRKIASL 123

Query: 128 SFSDDFENGSDEDDDNKEPRK-------------IGCGKLGKDPTVETSFLPDSEREAEE 187
           SF+ D   G DE+++ +E  +             +   KLGK+P V+TSFLPD +RE EE
Sbjct: 124 SFNPD--EGEDEEEEEEEEEEEEEDEIEEEICLPVKKKKLGKNPDVDTSFLPDRDREEEE 183

Query: 188 QAERERLKKQWLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQLAP 247
              RE L+++W R+QE+I++E +EIT+SYWDG+GHR+ ++ +KG+TI +FL+   + L  
Sbjct: 184 NRLREELRQEWERKQEKIKSEEIEITFSYWDGSGHRKTVKMKKGNTIQQFLQRALEVLRK 243

Query: 248 EFREIRTTSVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIADATI 307
           +F E+R+  VE+L+Y+KEDLIIPH HSFY+ IV KARGKSGPLF+FDVH+D+R + DAT+
Sbjct: 244 DFSELRSAGVEHLMYIKEDLIIPHHHSFYDFIVTKARGKSGPLFNFDVHDDIRLVNDATV 303

Query: 308 EKDESHAGKVVERHWYEKNKHIFPASRWEIYDPTKKWERYTI 331
           EKDESHAGKVV R WYEKNKHIFPASRWE YDP KKW++YTI
Sbjct: 304 EKDESHAGKVVLRSWYEKNKHIFPASRWEPYDPEKKWDKYTI 340

[Close]

BLAST of Cp4.1LG16g03010 vs. NCBI nr
Match: XP_023513348.1 (protein XAP5 CIRCADIAN TIMEKEEPER isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 642 bits (1656), Expect = 6.82e-232
Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 0


Query: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSEILE 60
           MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSEILE
Sbjct: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSEILE 60

Query: 61  TAFKKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEELQLQKRRKRKIKGNSR 120
           TAFKKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEELQLQKRRKRKIKGNSR
Sbjct: 61  TAFKKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEELQLQKRRKRKIKGNSR 120

Query: 121 LSFSDDFENGSDEDDDNKEPRKIGCGKLGKDPTVETSFLPDSEREAEEQAERERLKKQWL 180
           LSFSDDFENGSDEDDDNKEPRKIGCGKLGKDPTVETSFLPDSEREAEEQAERERLKKQWL
Sbjct: 121 LSFSDDFENGSDEDDDNKEPRKIGCGKLGKDPTVETSFLPDSEREAEEQAERERLKKQWL 180

Query: 181 REQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQLAPEFREIRTTSVEN 240
           REQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQLAPEFREIRTTSVEN
Sbjct: 181 REQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQLAPEFREIRTTSVEN 240

Query: 241 LLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIADATIEKDESHAGKVVE 300
           LLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIADATIEKDESHAGKVVE
Sbjct: 241 LLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIADATIEKDESHAGKVVE 300

Query: 301 RHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 333
           RHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD
Sbjct: 301 RHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 333

[Close]

BLAST of Cp4.1LG16g03010 vs. NCBI nr
Match: XP_022987006.1 (protein XAP5 CIRCADIAN TIMEKEEPER isoform X1 [Cucurbita maxima])

HSP 1 Score: 641 bits (1653), Expect = 1.96e-231
Identity = 332/333 (99.70%), Postives = 333/333 (100.00%), Query Frame = 0


Query: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSEILE 60
           MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSEILE
Sbjct: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSEILE 60

Query: 61  TAFKKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEELQLQKRRKRKIKGNSR 120
           TAFKKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEELQLQKRRKRKI+GNSR
Sbjct: 61  TAFKKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEELQLQKRRKRKIRGNSR 120

Query: 121 LSFSDDFENGSDEDDDNKEPRKIGCGKLGKDPTVETSFLPDSEREAEEQAERERLKKQWL 180
           LSFSDDFENGSDEDDDNKEPRKIGCGKLGKDPTVETSFLPDSEREAEEQAERERLKKQWL
Sbjct: 121 LSFSDDFENGSDEDDDNKEPRKIGCGKLGKDPTVETSFLPDSEREAEEQAERERLKKQWL 180

Query: 181 REQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQLAPEFREIRTTSVEN 240
           REQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQLAPEFREIRTTSVEN
Sbjct: 181 REQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQLAPEFREIRTTSVEN 240

Query: 241 LLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIADATIEKDESHAGKVVE 300
           LLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIADATIEKDESHAGKVVE
Sbjct: 241 LLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIADATIEKDESHAGKVVE 300

Query: 301 RHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 333
           RHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD
Sbjct: 301 RHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 333

[Close]

BLAST of Cp4.1LG16g03010 vs. NCBI nr
Match: XP_022944547.1 (protein XAP5 CIRCADIAN TIMEKEEPER isoform X1 [Cucurbita moschata])

HSP 1 Score: 640 bits (1652), Expect = 2.78e-231
Identity = 331/333 (99.40%), Postives = 333/333 (100.00%), Query Frame = 0


Query: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSEILE 60
           MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSEILE
Sbjct: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSEILE 60

Query: 61  TAFKKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEELQLQKRRKRKIKGNSR 120
           TAFKKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEELQLQKRRKRKI+GNSR
Sbjct: 61  TAFKKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEELQLQKRRKRKIRGNSR 120

Query: 121 LSFSDDFENGSDEDDDNKEPRKIGCGKLGKDPTVETSFLPDSEREAEEQAERERLKKQWL 180
           LSFSDDFENGSDEDDDNKEPRK+GCGKLGKDPTVETSFLPDSEREAEEQAERERLKKQWL
Sbjct: 121 LSFSDDFENGSDEDDDNKEPRKVGCGKLGKDPTVETSFLPDSEREAEEQAERERLKKQWL 180

Query: 181 REQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQLAPEFREIRTTSVEN 240
           REQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQLAPEFREIRTTSVEN
Sbjct: 181 REQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQLAPEFREIRTTSVEN 240

Query: 241 LLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIADATIEKDESHAGKVVE 300
           LLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIADATIEKDESHAGKVVE
Sbjct: 241 LLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIADATIEKDESHAGKVVE 300

Query: 301 RHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 333
           RHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD
Sbjct: 301 RHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 333

[Close]

BLAST of Cp4.1LG16g03010 vs. NCBI nr
Match: XP_023513349.1 (protein XAP5 CIRCADIAN TIMEKEEPER isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 636 bits (1640), Expect = 1.81e-229
Identity = 332/333 (99.70%), Postives = 332/333 (99.70%), Query Frame = 0


Query: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSEILE 60
           MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSEILE
Sbjct: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSEILE 60

Query: 61  TAFKKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEELQLQKRRKRKIKGNSR 120
           TAFKKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEELQLQKRRKRKIKGNSR
Sbjct: 61  TAFKKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEELQLQKRRKRKIKGNSR 120

Query: 121 LSFSDDFENGSDEDDDNKEPRKIGCGKLGKDPTVETSFLPDSEREAEEQAERERLKKQWL 180
           LSFSDDFENGSDEDDDNK PRKIGCGKLGKDPTVETSFLPDSEREAEEQAERERLKKQWL
Sbjct: 121 LSFSDDFENGSDEDDDNK-PRKIGCGKLGKDPTVETSFLPDSEREAEEQAERERLKKQWL 180

Query: 181 REQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQLAPEFREIRTTSVEN 240
           REQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQLAPEFREIRTTSVEN
Sbjct: 181 REQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQLAPEFREIRTTSVEN 240

Query: 241 LLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIADATIEKDESHAGKVVE 300
           LLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIADATIEKDESHAGKVVE
Sbjct: 241 LLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIADATIEKDESHAGKVVE 300

Query: 301 RHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 333
           RHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD
Sbjct: 301 RHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 332

[Close]

BLAST of Cp4.1LG16g03010 vs. NCBI nr
Match: XP_022987007.1 (protein XAP5 CIRCADIAN TIMEKEEPER isoform X2 [Cucurbita maxima] >KAG6571039.1 Protein XAP5 CIRCADIAN TIMEKEEPER, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 635 bits (1637), Expect = 5.17e-229
Identity = 331/333 (99.40%), Postives = 332/333 (99.70%), Query Frame = 0


Query: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSEILE 60
           MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSEILE
Sbjct: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSEILE 60

Query: 61  TAFKKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEELQLQKRRKRKIKGNSR 120
           TAFKKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEELQLQKRRKRKI+GNSR
Sbjct: 61  TAFKKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEELQLQKRRKRKIRGNSR 120

Query: 121 LSFSDDFENGSDEDDDNKEPRKIGCGKLGKDPTVETSFLPDSEREAEEQAERERLKKQWL 180
           LSFSDDFENGSDEDDDNK PRKIGCGKLGKDPTVETSFLPDSEREAEEQAERERLKKQWL
Sbjct: 121 LSFSDDFENGSDEDDDNK-PRKIGCGKLGKDPTVETSFLPDSEREAEEQAERERLKKQWL 180

Query: 181 REQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQLAPEFREIRTTSVEN 240
           REQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQLAPEFREIRTTSVEN
Sbjct: 181 REQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQLAPEFREIRTTSVEN 240

Query: 241 LLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIADATIEKDESHAGKVVE 300
           LLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIADATIEKDESHAGKVVE
Sbjct: 241 LLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIADATIEKDESHAGKVVE 300

Query: 301 RHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 333
           RHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD
Sbjct: 301 RHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 332

[Close]

BLAST of Cp4.1LG16g03010 vs. ExPASy TrEMBL
Match: A0A6J1JCW5 (protein XAP5 CIRCADIAN TIMEKEEPER isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484583 PE=4 SV=1)

HSP 1 Score: 641 bits (1653), Expect = 9.47e-232
Identity = 332/333 (99.70%), Postives = 333/333 (100.00%), Query Frame = 0


Query: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSEILE 60
           MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSEILE
Sbjct: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSEILE 60

Query: 61  TAFKKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEELQLQKRRKRKIKGNSR 120
           TAFKKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEELQLQKRRKRKI+GNSR
Sbjct: 61  TAFKKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEELQLQKRRKRKIRGNSR 120

Query: 121 LSFSDDFENGSDEDDDNKEPRKIGCGKLGKDPTVETSFLPDSEREAEEQAERERLKKQWL 180
           LSFSDDFENGSDEDDDNKEPRKIGCGKLGKDPTVETSFLPDSEREAEEQAERERLKKQWL
Sbjct: 121 LSFSDDFENGSDEDDDNKEPRKIGCGKLGKDPTVETSFLPDSEREAEEQAERERLKKQWL 180

Query: 181 REQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQLAPEFREIRTTSVEN 240
           REQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQLAPEFREIRTTSVEN
Sbjct: 181 REQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQLAPEFREIRTTSVEN 240

Query: 241 LLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIADATIEKDESHAGKVVE 300
           LLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIADATIEKDESHAGKVVE
Sbjct: 241 LLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIADATIEKDESHAGKVVE 300

Query: 301 RHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 333
           RHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD
Sbjct: 301 RHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 333

[Close]

BLAST of Cp4.1LG16g03010 vs. ExPASy TrEMBL
Match: A0A6J1FVX9 (protein XAP5 CIRCADIAN TIMEKEEPER isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448966 PE=4 SV=1)

HSP 1 Score: 640 bits (1652), Expect = 1.34e-231
Identity = 331/333 (99.40%), Postives = 333/333 (100.00%), Query Frame = 0


Query: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSEILE 60
           MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSEILE
Sbjct: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSEILE 60

Query: 61  TAFKKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEELQLQKRRKRKIKGNSR 120
           TAFKKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEELQLQKRRKRKI+GNSR
Sbjct: 61  TAFKKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEELQLQKRRKRKIRGNSR 120

Query: 121 LSFSDDFENGSDEDDDNKEPRKIGCGKLGKDPTVETSFLPDSEREAEEQAERERLKKQWL 180
           LSFSDDFENGSDEDDDNKEPRK+GCGKLGKDPTVETSFLPDSEREAEEQAERERLKKQWL
Sbjct: 121 LSFSDDFENGSDEDDDNKEPRKVGCGKLGKDPTVETSFLPDSEREAEEQAERERLKKQWL 180

Query: 181 REQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQLAPEFREIRTTSVEN 240
           REQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQLAPEFREIRTTSVEN
Sbjct: 181 REQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQLAPEFREIRTTSVEN 240

Query: 241 LLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIADATIEKDESHAGKVVE 300
           LLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIADATIEKDESHAGKVVE
Sbjct: 241 LLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIADATIEKDESHAGKVVE 300

Query: 301 RHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 333
           RHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD
Sbjct: 301 RHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 333

[Close]

BLAST of Cp4.1LG16g03010 vs. ExPASy TrEMBL
Match: A0A6J1J955 (protein XAP5 CIRCADIAN TIMEKEEPER isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484583 PE=4 SV=1)

HSP 1 Score: 635 bits (1637), Expect = 2.50e-229
Identity = 331/333 (99.40%), Postives = 332/333 (99.70%), Query Frame = 0


Query: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSEILE 60
           MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSEILE
Sbjct: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSEILE 60

Query: 61  TAFKKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEELQLQKRRKRKIKGNSR 120
           TAFKKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEELQLQKRRKRKI+GNSR
Sbjct: 61  TAFKKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEELQLQKRRKRKIRGNSR 120

Query: 121 LSFSDDFENGSDEDDDNKEPRKIGCGKLGKDPTVETSFLPDSEREAEEQAERERLKKQWL 180
           LSFSDDFENGSDEDDDNK PRKIGCGKLGKDPTVETSFLPDSEREAEEQAERERLKKQWL
Sbjct: 121 LSFSDDFENGSDEDDDNK-PRKIGCGKLGKDPTVETSFLPDSEREAEEQAERERLKKQWL 180

Query: 181 REQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQLAPEFREIRTTSVEN 240
           REQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQLAPEFREIRTTSVEN
Sbjct: 181 REQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQLAPEFREIRTTSVEN 240

Query: 241 LLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIADATIEKDESHAGKVVE 300
           LLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIADATIEKDESHAGKVVE
Sbjct: 241 LLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIADATIEKDESHAGKVVE 300

Query: 301 RHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 333
           RHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD
Sbjct: 301 RHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 332

[Close]

BLAST of Cp4.1LG16g03010 vs. ExPASy TrEMBL
Match: A0A6J1FY54 (protein XAP5 CIRCADIAN TIMEKEEPER isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448966 PE=4 SV=1)

HSP 1 Score: 634 bits (1636), Expect = 3.56e-229
Identity = 330/333 (99.10%), Postives = 332/333 (99.70%), Query Frame = 0


Query: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSEILE 60
           MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSEILE
Sbjct: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSEILE 60

Query: 61  TAFKKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEELQLQKRRKRKIKGNSR 120
           TAFKKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEELQLQKRRKRKI+GNSR
Sbjct: 61  TAFKKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEELQLQKRRKRKIRGNSR 120

Query: 121 LSFSDDFENGSDEDDDNKEPRKIGCGKLGKDPTVETSFLPDSEREAEEQAERERLKKQWL 180
           LSFSDDFENGSDEDDDNK PRK+GCGKLGKDPTVETSFLPDSEREAEEQAERERLKKQWL
Sbjct: 121 LSFSDDFENGSDEDDDNK-PRKVGCGKLGKDPTVETSFLPDSEREAEEQAERERLKKQWL 180

Query: 181 REQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQLAPEFREIRTTSVEN 240
           REQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQLAPEFREIRTTSVEN
Sbjct: 181 REQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQLAPEFREIRTTSVEN 240

Query: 241 LLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIADATIEKDESHAGKVVE 300
           LLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIADATIEKDESHAGKVVE
Sbjct: 241 LLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIADATIEKDESHAGKVVE 300

Query: 301 RHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 333
           RHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD
Sbjct: 301 RHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 332

[Close]

BLAST of Cp4.1LG16g03010 vs. ExPASy TrEMBL
Match: A0A0A0LM87 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G263920 PE=4 SV=1)

HSP 1 Score: 626 bits (1615), Expect = 6.32e-226
Identity = 327/335 (97.61%), Postives = 331/335 (98.81%), Query Frame = 0


Query: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSEILE 60
           MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSEILE
Sbjct: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSEILE 60

Query: 61  TAFKKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEELQLQKRRKRKIKGNSR 120
           TAFKKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEELQLQKRRKRKI+GNSR
Sbjct: 61  TAFKKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEELQLQKRRKRKIRGNSR 120

Query: 121 LSFSDDFENGSDEDDDNK--EPRKIGCGKLGKDPTVETSFLPDSEREAEEQAERERLKKQ 180
           LSFSDDFENGSDEDDDNK  EP+K+G GKLGKDPTVETSFLPDSEREAEEQAERERLK+Q
Sbjct: 121 LSFSDDFENGSDEDDDNKNLEPKKLGRGKLGKDPTVETSFLPDSEREAEEQAERERLKRQ 180

Query: 181 WLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQLAPEFREIRTTSV 240
           WLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLR VQQQLAPEFREIRTTSV
Sbjct: 181 WLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRAVQQQLAPEFREIRTTSV 240

Query: 241 ENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIADATIEKDESHAGKV 300
           ENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIADATIEKDESHAGKV
Sbjct: 241 ENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIADATIEKDESHAGKV 300

Query: 301 VERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 333
           VERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD
Sbjct: 301 VERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 335

[Close]

BLAST of Cp4.1LG16g03010 vs. TAIR 10
Match: AT2G21150.1 (XAP5 family protein )

HSP 1 Score: 570.5 bits (1469), Expect = 9.0e-163
Identity = 295/337 (87.54%), Postives = 314/337 (93.18%), Query Frame = 0


Query: 1   MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKAKTASAKGQPGLLQFGSSTSEILE 60
           MSGMGDGYVGTAQDAVRIRRL+KQREAER+KIQELK+K+AS   Q GLLQFG+S+ EIL+
Sbjct: 1   MSGMGDGYVGTAQDAVRIRRLQKQREAERKKIQELKSKSASGNDQSGLLQFGTSSCEILD 60

Query: 61  TAFKKETVGLVTREEYVEKRVNIRNKIEEEEKEKLQKLQQEEEELQLQKR-RKRKIKGNS 120
           TAFKKETVGLVTREEYVEKRVNIRNK EEEEKEKLQKLQQEEEELQL+KR +KRKIKG+S
Sbjct: 61  TAFKKETVGLVTREEYVEKRVNIRNKFEEEEKEKLQKLQQEEEELQLEKRNKKRKIKGSS 120

Query: 121 RLSFSDDFENGSDEDDDNKEPRKIG---CGKLGKDPTVETSFLPDSEREAEEQAERERLK 180
           RLSF++DFENGSDEDD   +    G   CGKLGKDP+VET+FLPDSEREAEEQAERERLK
Sbjct: 121 RLSFAEDFENGSDEDDGENKSSGTGNLRCGKLGKDPSVETNFLPDSEREAEEQAERERLK 180

Query: 181 KQWLREQEQIRNEPLEITYSYWDGAGHRRVIQARKGDTIGEFLRTVQQQLAPEFREIRTT 240
           KQWLREQEQI+NEPLEITYSYWDG GHRRVIQ RKGD IG FLR VQQQLAP+FREIRT 
Sbjct: 181 KQWLREQEQIKNEPLEITYSYWDGTGHRRVIQVRKGDPIGNFLRAVQQQLAPDFREIRTA 240

Query: 241 SVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIADATIEKDESHAG 300
           SVENLLYVKEDLIIPHQHSFYELI+NKARGKSGPLFHFDVHEDVRTIADATIEKDESHAG
Sbjct: 241 SVENLLYVKEDLIIPHQHSFYELIINKARGKSGPLFHFDVHEDVRTIADATIEKDESHAG 300

Query: 301 KVVERHWYEKNKHIFPASRWEIYDPTKKWERYTIHGD 334
           KVVERHWYEKNKHIFPASRWEIYDPTKKWERYT+HGD
Sbjct: 301 KVVERHWYEKNKHIFPASRWEIYDPTKKWERYTVHGD 337

The following BLAST results are available for this feature:

BLAST of Cp4.1LG16g03010 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8H110	1.3e-161	87.54	Protein XAP5 CIRCADIAN TIMEKEEPER OS=Arabidopsis thaliana OX=3702 GN=XCT PE=1 SV...	[more]
B8BDW1	4.5e-159	87.76	Protein XAP5 CIRCADIAN TIMEKEEPER OS=Oryza sativa subsp. indica OX=39946 GN=XCT ...	[more]
Q69JZ7	4.5e-159	87.76	Protein XAP5 CIRCADIAN TIMEKEEPER OS=Oryza sativa subsp. japonica OX=39947 GN=XC...	[more]
Q28BK4	3.9e-78	47.85	Protein FAM50A OS=Xenopus tropicalis OX=8364 GN=fam50a PE=2 SV=2	[more]
Q568K9	8.7e-78	47.66	Protein FAM50A OS=Danio rerio OX=7955 GN=fam50a PE=2 SV=1	[more]

BLAST of Cp4.1LG16g03010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023513348.1	6.82e-232	100.00	protein XAP5 CIRCADIAN TIMEKEEPER isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022987006.1	1.96e-231	99.70	protein XAP5 CIRCADIAN TIMEKEEPER isoform X1 [Cucurbita maxima]	[more]
XP_022944547.1	2.78e-231	99.40	protein XAP5 CIRCADIAN TIMEKEEPER isoform X1 [Cucurbita moschata]	[more]
XP_023513349.1	1.81e-229	99.70	protein XAP5 CIRCADIAN TIMEKEEPER isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022987007.1	5.17e-229	99.40	protein XAP5 CIRCADIAN TIMEKEEPER isoform X2 [Cucurbita maxima] >KAG6571039.1 Pr...	[more]

BLAST of Cp4.1LG16g03010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JCW5	9.47e-232	99.70	protein XAP5 CIRCADIAN TIMEKEEPER isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1FVX9	1.34e-231	99.40	protein XAP5 CIRCADIAN TIMEKEEPER isoform X1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1J955	2.50e-229	99.40	protein XAP5 CIRCADIAN TIMEKEEPER isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1FY54	3.56e-229	99.10	protein XAP5 CIRCADIAN TIMEKEEPER isoform X2 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A0A0LM87	6.32e-226	97.61	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G263920 PE=4 SV=1	[more]

BLAST of Cp4.1LG16g03010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21150.1	9.0e-163	87.54	XAP5 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 73..118
None	No IPR available	COILS	Coil	Coil	coord: 18..45
None	No IPR available	COILS	Coil	Coil	coord: 163..183
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..170
None	No IPR available	PANTHER	PTHR12722:SF3	BNAA04G11980D PROTEIN	coord: 1..207
None	No IPR available	PANTHER	PTHR12722:SF3	BNAA04G11980D PROTEIN	coord: 208..333
IPR007005	XAP5 protein	PFAM	PF04921	XAP5	coord: 89..329 e-value: 9.9E-73 score: 245.1
IPR007005	XAP5 protein	PANTHER	PTHR12722	XAP-5 PROTEIN-RELATED	coord: 1..207
IPR007005	XAP5 protein	PANTHER	PTHR12722	XAP-5 PROTEIN-RELATED	coord: 208..333

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG16g03010.1	Cp4.1LG16g03010.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006325	chromatin organization
biological_process	GO:0009873	ethylene-activated signaling pathway
biological_process	GO:0035196	production of miRNAs involved in gene silencing by miRNA
biological_process	GO:0042752	regulation of circadian rhythm
biological_process	GO:0010099	regulation of photomorphogenesis
biological_process	GO:0009637	response to blue light
biological_process	GO:0010114	response to red light
cellular_component	GO:0005634	nucleus