Cp4.1LG16g01080 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGAACAAATCCTTCCTCTCCATGCTCCTATTGGTCCTCCTCATCTTCTCTTCTTCAGGTAATCAAAGTCTAACCCTACCATCTTTGCCATTTCTTCTTTCTTCCTTTCTTCCTAATATGTGTGTTATTTGCAGAAGAGATGATGGGTCGTGGTGCTGAGGCTCGAATATGCAAGTCCAGGAACCACCACTACCATGGCCTCTGCTTTAGCCACAAGTGCGCTACTCGTTGCCGAAAGGAAGGCTACCTTGGCGGTCATTGTCACCACTTCCCCCGCCATTGCTATTGCACTCACAGTTGTTAA ATGATGAACAAATCCTTCCTCTCCATGCTCCTATTGGTCCTCCTCATCTTCTCTTCTTCAGAAGAGATGATGGGTCGTGGTGCTGAGGCTCGAATATGCAAGTCCAGGAACCACCACTACCATGGCCTCTGCTTTAGCCACAAGTGCGCTACTCGTTGCCGAAAGGAAGGCTACCTTGGCGGTCATTGTCACCACTTCCCCCGCCATTGCTATTGCACTCACAGTTGTTAA ATGATGAACAAATCCTTCCTCTCCATGCTCCTATTGGTCCTCCTCATCTTCTCTTCTTCAGAAGAGATGATGGGTCGTGGTGCTGAGGCTCGAATATGCAAGTCCAGGAACCACCACTACCATGGCCTCTGCTTTAGCCACAAGTGCGCTACTCGTTGCCGAAAGGAAGGCTACCTTGGCGGTCATTGTCACCACTTCCCCCGCCATTGCTATTGCACTCACAGTTGTTAA MMNKSFLSMLLLVLLIFSSSEEMMGRGAEARICKSRNHHYHGLCFSHKCATRCRKEGYLGGHCHHFPRHCYCTHSC Homology
BLAST of Cp4.1LG16g01080 vs. ExPASy Swiss-Prot
Match: Q9FFP8 (Defensin-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=PDF2.5 PE=3 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 1.2e-11 Identity = 35/76 (46.05%), Postives = 46/76 (60.53%), Query Frame = 0
BLAST of Cp4.1LG16g01080 vs. ExPASy Swiss-Prot
Match: Q40901 (Defensin-like protein OS=Petunia integrifolia OX=4103 PE=2 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 2.0e-09 Identity = 28/66 (42.42%), Postives = 43/66 (65.15%), Query Frame = 0
BLAST of Cp4.1LG16g01080 vs. ExPASy Swiss-Prot
Match: Q39182 (Defensin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=PDF2.2 PE=2 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 9.1e-07 Identity = 29/79 (36.71%), Postives = 46/79 (58.23%), Query Frame = 0
BLAST of Cp4.1LG16g01080 vs. ExPASy Swiss-Prot
Match: P83399 (Defensin-like protein 1 OS=Vigna unguiculata OX=3917 PE=1 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 3.5e-06 Identity = 22/47 (46.81%), Postives = 30/47 (63.83%), Query Frame = 0
BLAST of Cp4.1LG16g01080 vs. ExPASy Swiss-Prot
Match: P20346 (Defensin-like protein P322 OS=Solanum tuberosum OX=4113 PE=2 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 7.7e-06 Identity = 29/72 (40.28%), Postives = 41/72 (56.94%), Query Frame = 0
BLAST of Cp4.1LG16g01080 vs. NCBI nr
Match: XP_023513006.1 (defensin-like protein 1 [Cucurbita pepo subsp. pepo] >XP_023513007.1 defensin-like protein 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 164 bits (415), Expect = 3.95e-51 Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0
BLAST of Cp4.1LG16g01080 vs. NCBI nr
Match: KAG6571315.1 (Defensin-like protein 6, partial [Cucurbita argyrosperma subsp. sororia] >KAG6571316.1 Defensin-like protein 6, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 162 bits (410), Expect = 2.29e-50 Identity = 75/76 (98.68%), Postives = 75/76 (98.68%), Query Frame = 0
BLAST of Cp4.1LG16g01080 vs. NCBI nr
Match: XP_022932007.1 (defensin-like protein 1 [Cucurbita moschata]) HSP 1 Score: 161 bits (407), Expect = 6.58e-50 Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 0
BLAST of Cp4.1LG16g01080 vs. NCBI nr
Match: XP_022973849.1 (defensin-like protein 1 [Cucurbita maxima] >XP_022973850.1 defensin-like protein 1 [Cucurbita maxima] >XP_022973851.1 defensin-like protein 1 [Cucurbita maxima]) HSP 1 Score: 157 bits (396), Expect = 3.14e-48 Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 0
BLAST of Cp4.1LG16g01080 vs. NCBI nr
Match: XP_022931975.1 (defensin-like protein 1 [Cucurbita moschata] >XP_022933317.1 defensin-like protein 1 [Cucurbita moschata]) HSP 1 Score: 156 bits (395), Expect = 4.60e-48 Identity = 74/77 (96.10%), Postives = 75/77 (97.40%), Query Frame = 0
BLAST of Cp4.1LG16g01080 vs. ExPASy TrEMBL
Match: A0A6J1EVF5 (defensin-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111438337 PE=4 SV=1) HSP 1 Score: 161 bits (407), Expect = 3.18e-50 Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 0
BLAST of Cp4.1LG16g01080 vs. ExPASy TrEMBL
Match: A0A6J1I9S0 (defensin-like protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111472392 PE=4 SV=1) HSP 1 Score: 157 bits (396), Expect = 1.52e-48 Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 0
BLAST of Cp4.1LG16g01080 vs. ExPASy TrEMBL
Match: A0A6J1F0X5 (defensin-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111438310 PE=4 SV=1) HSP 1 Score: 156 bits (395), Expect = 2.23e-48 Identity = 74/77 (96.10%), Postives = 75/77 (97.40%), Query Frame = 0
BLAST of Cp4.1LG16g01080 vs. ExPASy TrEMBL
Match: A0A6J1DWX4 (defensin-like protein 1 OS=Momordica charantia OX=3673 GN=LOC111025288 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 1.71e-25 Identity = 50/77 (64.94%), Postives = 60/77 (77.92%), Query Frame = 0
BLAST of Cp4.1LG16g01080 vs. ExPASy TrEMBL
Match: A0A6J1EVR5 (defensin-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111438308 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 1.71e-25 Identity = 48/77 (62.34%), Postives = 59/77 (76.62%), Query Frame = 0
BLAST of Cp4.1LG16g01080 vs. TAIR 10
Match: AT5G63660.1 (Scorpion toxin-like knottin superfamily protein ) HSP 1 Score: 70.1 bits (170), Expect = 8.7e-13 Identity = 35/76 (46.05%), Postives = 46/76 (60.53%), Query Frame = 0
BLAST of Cp4.1LG16g01080 vs. TAIR 10
Match: AT2G02100.1 (low-molecular-weight cysteine-rich 69 ) HSP 1 Score: 53.9 bits (128), Expect = 6.5e-08 Identity = 29/79 (36.71%), Postives = 46/79 (58.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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