Cp4.1LG16g00840 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AGCCACATGGCAAGCTGCCAAGCTCCATGAACTCCATGTCCATGGGTTACAAAAGGGGTGCTTTTCATTCCCTTGCTTCTCCTCCTACTGGTTCCTCCATTTGCATGGATAAGATAAGGTTGATTGAAGCCATAATAATGGGAAGAATGGATAGGAAATCATCCATTGAAACAGAGCCGAGGACTCTCAAAATGAACCAAATCCAATTTGCAAGAGTAAGTATGGAAGGCTTAATGATTGCGTGTGTGTGTGTGTTTTTGGTTTGAGTAAGGCTTTCAGATGAGCAATGGTTTTGTGATGAACTGCAGGAAGCAGCGCTGTACGTGATGAACACAACTAGCATGGAAGAAGCAATCAAGATCTTCACAGAGGTAATATCATACACAAATTTCGCTATCAATCATTATCAGATTCCATATTAATTGGAGTTGGGTAACGAAACATTCCTTATAAAGGTATGAAAATCGCTCCATAGTACACGCATTTTAAAATCGTGAGACTGATGACGATACGTAACGGGCCAAAGCGGACATGTCGCTCTATTAGTGTTGGGCTTGGGCTATTACAAATGGTATTTGTGCCAACCACGGCTCTCTCTGGCCCCTAAAAGAGTGGATTGTGAGATCCCACGTTAGTTGGAGAGGGGAACAAAGCATTCCTTATAAGAGTGTGAAAATCTCTCCCTAGGTTGGTAGCGGTACGTAACAGGCCAAAGCGGACATATCTAGGTGGGCTTGGGCTATTACAAATGGTTTCAAAGCCAGACAATGGACAGTGTGTCAGTAAGGACGCTGACCCTTTAGGGAGGTGGATTGTGAGATCTCATATTCGTTGTAGAGGGAAAACGAAGCATTTCTTATACGAGTGTGGAAACCTCTCCCTAGTAGACGTATTTTGAAACTGTGAGGCTGACAAAGCGGAAAATATCTACCAGCGGTGAGCTTGGACTATTACAAATGGTATCAGAGCCAGCCACCGAGCTATGAGCTAGCAAGGACGCTGCTCCCAAAGGGGTGGATTTTGAAATCTCATTCGTTGGGGGAGGGAAACGAAGCATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACACGTTTGAAAACCTTGAGGTTGACGGCGATACATAATGAGTCAAAATGGACAATATCTACTAGCGGTGGGTTTGAGGTACTACAAATGGTATCAGAGTCACAGAATCGCATACCGTGTAGTGTGCCAGCGAGGATGTTGACCCTCAAAGTGGTGGATTGTGAGATTCCACGTTGGTTGGAGAGGGGAACGGAACGGAACAGAACATTCTTACCCCTCTCTAATAGACACGTTTTAAAACTGTGAGGCTGATGACGATACCTAACGGACCAAAACAAACAATATTTACTAGCGGTGAAATAGAGCTATTACAATTACTTTAATATAAAAAAATGGAAAAGGGTTATATGATGGTGATGTAGTGGAAATTGCAGGGATTAGAAGCAGTGGAATGCAAAGCAATTCGAGATGAAGATGAATCCATAATGGAGAATTGGTTCCATGAACAAGAAGCTGATGAGCTTCCACCTCTTTATCAGCTAAGAGACATTGTCACTGCCCCTTTT AGCCACATGGCAAGCTGCCAAGCTCCATGAACTCCATGTCCATGGGTTACAAAAGGGGTGCTTTTCATTCCCTTGCTTCTCCTCCTACTGGTTCCTCCATTTGCATGGATAAGATAAGGTTGATTGAAGCCATAATAATGGGAAGAATGGATAGGAAATCATCCATTGAAACAGAGCCGAGGACTCTCAAAATGAACCAAATCCAATTTGCAAGAGTAAGTATGGAAGGCTTAATGATTGCGTATGAGCAATGGTTTTGTGATGAACTGCAGGAAGCAGCGCTGTACGGATTAGAAGCAGTGGAATGCAAAGCAATTCGAGATGAAGATGAATCCATAATGGAGAATTGGTTCCATGAACAAGAAGCTGATGAGCTTCCACCTCTTTATCAGCTAAGAGACATTGTCACTGCCCCTTTT ATGAACTCCATGTCCATGGGTTACAAAAGGGGTGCTTTTCATTCCCTTGCTTCTCCTCCTACTGGTTCCTCCATTTGCATGGATAAGATAAGGTTGATTGAAGCCATAATAATGGGAAGAATGGATAGGAAATCATCCATTGAAACAGAGCCGAGGACTCTCAAAATGAACCAAATCCAATTTGCAAGAGTAAGTATGGAAGGCTTAATGATTGCGTATGAGCAATGGTTTTGTGATGAACTGCAGGAAGCAGCGCTGTACGGATTAGAAGCAGTGGAATGCAAAGCAATTCGAGATGAAGATGAATCCATAATGGAGAATTGGTTCCATGAACAAGAAGCTGATGAGCTTCCACCTCTTTATCAGCTAAGAGACATTGTCACTGCCCCTTTT MNSMSMGYKRGAFHSLASPPTGSSICMDKIRLIEAIIMGRMDRKSSIETEPRTLKMNQIQFARVSMEGLMIAYEQWFCDELQEAALYGLEAVECKAIRDEDESIMENWFHEQEADELPPLYQLRDIVTAPF Homology
BLAST of Cp4.1LG16g00840 vs. NCBI nr
Match: KAG6571348.1 (hypothetical protein SDJN03_30263, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 145 bits (366), Expect = 2.29e-42 Identity = 80/105 (76.19%), Postives = 83/105 (79.05%), Query Frame = 0
BLAST of Cp4.1LG16g00840 vs. NCBI nr
Match: XP_023512402.1 (uncharacterized protein LOC111777167 [Cucurbita pepo subsp. pepo] >KAG7011119.1 hypothetical protein SDJN02_27917, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 136 bits (342), Expect = 7.61e-39 Identity = 72/94 (76.60%), Postives = 75/94 (79.79%), Query Frame = 0
BLAST of Cp4.1LG16g00840 vs. NCBI nr
Match: XP_008460897.1 (PREDICTED: uncharacterized protein LOC103499638 [Cucumis melo]) HSP 1 Score: 102 bits (255), Expect = 1.32e-25 Identity = 56/95 (58.95%), Postives = 67/95 (70.53%), Query Frame = 0
BLAST of Cp4.1LG16g00840 vs. NCBI nr
Match: XP_011649401.1 (uncharacterized protein LOC105434623 [Cucumis sativus] >KGN62156.1 hypothetical protein Csa_006615 [Cucumis sativus]) HSP 1 Score: 98.2 bits (243), Expect = 8.69e-24 Identity = 52/95 (54.74%), Postives = 67/95 (70.53%), Query Frame = 0
BLAST of Cp4.1LG16g00840 vs. NCBI nr
Match: XP_038902606.1 (uncharacterized protein LOC120089256 [Benincasa hispida]) HSP 1 Score: 95.5 bits (236), Expect = 9.47e-23 Identity = 53/94 (56.38%), Postives = 66/94 (70.21%), Query Frame = 0
BLAST of Cp4.1LG16g00840 vs. ExPASy TrEMBL
Match: A0A1S3CDH2 (uncharacterized protein LOC103499638 OS=Cucumis melo OX=3656 GN=LOC103499638 PE=4 SV=1) HSP 1 Score: 102 bits (255), Expect = 6.37e-26 Identity = 56/95 (58.95%), Postives = 67/95 (70.53%), Query Frame = 0
BLAST of Cp4.1LG16g00840 vs. ExPASy TrEMBL
Match: A0A0A0LQ89 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G302230 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 4.21e-24 Identity = 52/95 (54.74%), Postives = 67/95 (70.53%), Query Frame = 0
BLAST of Cp4.1LG16g00840 vs. ExPASy TrEMBL
Match: A0A6J1G887 (uncharacterized protein LOC111451648 OS=Cucurbita moschata OX=3662 GN=LOC111451648 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 1.06e-21 Identity = 53/94 (56.38%), Postives = 61/94 (64.89%), Query Frame = 0
BLAST of Cp4.1LG16g00840 vs. ExPASy TrEMBL
Match: A0A6J1DBC1 (uncharacterized protein LOC111018915 OS=Momordica charantia OX=3673 GN=LOC111018915 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 1.19e-19 Identity = 50/96 (52.08%), Postives = 61/96 (63.54%), Query Frame = 0
BLAST of Cp4.1LG16g00840 vs. ExPASy TrEMBL
Match: A0A6J1I9E9 (uncharacterized protein LOC111470407 OS=Cucurbita maxima OX=3661 GN=LOC111470407 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 7.92e-08 Identity = 26/28 (92.86%), Postives = 28/28 (100.00%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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