Cp4.1LG16g00140 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG16g00140
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	WRKY protein
Location	Cp4.1LG16: 657302 .. 660487 (-)
RNA-Seq Expression	Cp4.1LG16g00140
Synteny	Cp4.1LG16g00140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGTGTAGGGTTGCATTCAGAACCAAATCGGAGCAAGAGATTATGGATGATGGCTATAAGTGGAGGAAATATGGGAAAAAGTCCGTCAAGAACAGCCCGAATCCGAGGTAAATTCAAATTAGCGTTTTGATTGATAGAGTTATGCTTGTTTGGATTAAGATTAACTAACTCAAAATTTCGAGTTGATCGGATTGGTGACTCGAGTAACCTGAATAGAGTTCATAACTCAACTGGGTTGAGTTGGGGTTGTCGGGATGTTTTTTAAGATATCATACTTATCTACAATACATGTCTCGTTAATTGTTAAGTTATGCTTGTTTGGATTAGGGGCAACCAACTCAAATTCAAGTTGGTCGTATTAGTGACTCGAGTAACTTGAATAGAGTTCATAACTCAATCGGGTTGAGTTGGGTCGCCAGGATGTTTAAGATATCAAACTTATCTACAATACATGTCTCGTTGATTGTTGAGTTATGCTTGTTTGGATTAGGGGCGACCAGCTCGACCAACTCAGATTAAAGTTGGAAGGGTTGGTGACTCGAGTAACCTAAGTAAGTTCATAACCCAACAGGGTTGAGTTAAGTTGTCGGGTTGTTTTTAAAAATATAATACTTATCTACAGTACATGTTACATTGACGACTTAACTATTAATTGAGGTATAAAACTATAAACAAATGAACGGTAAACATGTCGGATGAAATATATAAATCGTTGAGCTTTGTTCATGTTGGTACGGGTATACAATTTTAGGTGACATATTCAGGAGGAATAGACATATTGGAGGCGGCTTGAGTAGTCAATGTATAACTCAATAAAGTTTTAGATAATATATATTTGGTGTGTGATTCATATTTAGTTTTGGAGGCAGAGTAGACTTGGGACAAAAAAACAAAGCAGTCAACTTTTTATTTATTTAATTTTTTTTTTTAAAAGAATATTTATAAGCTTTTCAAATCTTCGGTTCCATTGGTTCAATTGGGTCGTTGGATTACGGGTTACTTTATTGTAGGCTCGTAAAATATTTCAACCTCGTTTAAGCTTGTACACGTGGTTCTTATCTTATATATTTTTTTGACTTTTTAAATAGGAGTGTTCATATGATCCTAGAATCCGACCAATCCAGACTATCTAATCCAAACAATAAAAATTAGATTGGGTCAGATTTTTTCGATTTGGGTTCGGTTGACTTTATGAAAAATCGAAAAATTCAGGTCGGTTTGCTAGTTGACATTTTTTTTATCCAGTCAACTCAAAAATAGAGTTACGAGTGGACTCTACTTACCTAACTATTAAAGTTATTATGAAAATTAAGAATATTTAAGTCTGTAATCAATTTTAGTGATACATTAAGAATAATCGGACCATACAATCCAACTGAATTGAGTTGTGAACTTTATTTAGGTTCCTCGAGTGACTCAGTCAATTATCCTGATAAAATTTAGATCGGTCCTTATATAATTTGTCAATAATTAAAAAATTCTATATATATATTTATTATTATTTTTTTGGTCTAATTTTTTATTTTTTGTTTTACTTTTTTGGAGTTTAGTGGGTCCAATTTTCATTCTTATCGCTTTGGGATCTTGTATGTTTGTGTATTGAGTAGCCAAATTACTTTATAGGGTTCCACATGAGCATAATTGAAATAAAATATAATTTTCAACCTTTTTCTTCCATATTAATTTAATTTATATAACGATACAAGACATGTTCTTTTACTTCGATACGTGTCATTTTAACATGTTTTGTCTTCCTCAGTCACGTGTTTTTTACGAACAGTTTACAAAGAGCTGCCTAACATAGGGTAGGATGAATAGAGGCTTCTGAAAATGACGTTGCATCTTAGCCTCTAGAAAAGGATGTTAAATCTTCTGGTTAGTAATAGTTATATGTAGCAGTCCAAGCTCACCGCTAGCAGATATTGTCCCTTTGACCCGTTACGTATCTCCATCATTCTAATGGTTTTAAAACGTGTCTATTAGGGAGAGGTTTCCACACCCTTATAAAAAATGTTTCGTTCTTCTCTCTAATCGATGTGAAACCTCACACTATATCAATTTTTTAGGTTTAGGACCTTTCTTCATTTGAATATGGGGTTAGCTCACACACGTACTCTTTCAGTGGTATAATGCTTCAAGTTTAGGATTTAGATCAGGATCAATTGTATACTTCACGGGAAAAGTTTTTTTTATTTAAGTTCAGCCCTAGGGGAAAAAATAAAATAAAATAAAATAAAATAAGCATGTGTGATACCTTCATGCAGATCTCACTAAACTCGAGGGATGTAACTCAGTTGGTAGAGCTCTGCTCTTGCAGTTAGGTCATTATGATTACGAGTTAGATGTCTAAATTTTTAGACGGTAATGATATCTGATGTCCCACATTGGTTGGGGATAAGAACAAAATACCCTTTATAAGGGTGTGGAAACCTTCCCCTAACAAACACGTTTTAAAACCTTGAGGGGAAGCTCGAAAGGGAAAGCCCGAAAGAGGACAATATCTACTAGCGGTTGATCTGGACCGTTACAAATGGTAACAGAGCCAGACACCGGACGATGTACCAACCTTCTCGCTGTTCCCCGAAGGGGGGTAGACACGAGGCGGTGTGCCAGTAAGGACGCTGAACCCGAAGGGGGTGGATTTAGTGACGGTTCCACATCGATTGGAAGAAGAAAATAGTACCAGTGAGGAAGCTGGCCCCGAAGGGGGTGGATTGTGATGTTCCACATTGGTTGGGGAGGAAAACAAAACACCCTTTATAAGGATGTGGAAACCTTCTCTTAGCAGACGCGTTTTAAAGCTTTGAGGGGAAGCCGACGATTCTTTTAGAGTCACTATGAGACATAGAACAAAATTTTGGATCACCCTCGTTGCCAAACTATTCCAGATCTCGAAAGATTTCTACCCCAGTGATAATTTTGAAACGTTTATGAAAAGTCAATGATAATATTGCAACTATTAACGGGTCATTTTTGTATATATTATTATTGACAAAGGTATGGCTTTGGTACAGAAATTACTATAAATGTTCAAGTGAGGGATGCAATGTGAAGAAGAAGGTGGAAAGAGACAGAGAGGATGCTAGCTATGTGATTACTACTTACGAGGGTATCCACAACCATGAGAGCCCCTTTGTTGTGTATTACAATCAAATTCCATCCCTTACCTCTACTTCCACTTAG

mRNA sequence

ATGGGAACCAAATCGGAGCAAGAGATTATGGATGATGGCTATAAGTGGAGGAAATATGGGAAAAAGTCCGGATGCAATGTGAAGAAGAAGGTGGAAAGAGACAGAGAGGATGCTAGCTATGTGATTACTACTTACGAGGGTATCCACAACCATGAGAGCCCCTTTGTTGTGTATTACAATCAAATTCCATCCCTTACCTCTACTTCCACTTAG

Coding sequence (CDS)

ATGGGAACCAAATCGGAGCAAGAGATTATGGATGATGGCTATAAGTGGAGGAAATATGGGAAAAAGTCCGGATGCAATGTGAAGAAGAAGGTGGAAAGAGACAGAGAGGATGCTAGCTATGTGATTACTACTTACGAGGGTATCCACAACCATGAGAGCCCCTTTGTTGTGTATTACAATCAAATTCCATCCCTTACCTCTACTTCCACTTAG

Protein sequence

MGTKSEQEIMDDGYKWRKYGKKSGCNVKKKVERDREDASYVITTYEGIHNHESPFVVYYNQIPSLTSTST

Homology

[Close]

BLAST of Cp4.1LG16g00140 vs. ExPASy Swiss-Prot
Match: Q93WU9 (Probable WRKY transcription factor 51 OS=Arabidopsis thaliana OX=3702 GN=WRKY51 PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 2.4e-17
Identity = 43/76 (56.58%), Postives = 55/76 (72.37%), Query Frame = 0


Query: 3   TKSEQEIMDDGYKWRKYGKKS----------------GCNVKKKVERDREDASYVITTYE 62
           T+S+ ++MDDG+KWRKYGKKS                GC+VKK+VERD +DA+YVITTYE
Sbjct: 102 TRSKIDVMDDGFKWRKYGKKSVKNNINKRNYYKCSSEGCSVKKRVERDGDDAAYVITTYE 161

[Close]

BLAST of Cp4.1LG16g00140 vs. ExPASy Swiss-Prot
Match: Q8VWQ5 (Probable WRKY transcription factor 50 OS=Arabidopsis thaliana OX=3702 GN=WRKY50 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 4.2e-14
Identity = 38/67 (56.72%), Postives = 45/67 (67.16%), Query Frame = 0


Query: 3   TKSEQEIMDDGYKWRKYGKK----------------SGCNVKKKVERDREDASYVITTYE 54
           T+SE E++DDG+KWRKYGKK                 GC VKK+VERDR+D S+VITTYE
Sbjct: 105 TRSEVEVLDDGFKWRKYGKKMVKNSPHPRNYYKCSVDGCPVKKRVERDRDDPSFVITTYE 164

[Close]

BLAST of Cp4.1LG16g00140 vs. ExPASy Swiss-Prot
Match: Q9SJ09 (Probable WRKY transcription factor 59 OS=Arabidopsis thaliana OX=3702 GN=WRKY59 PE=2 SV=2)

HSP 1 Score: 73.6 bits (179), Expect = 1.0e-12
Identity = 36/69 (52.17%), Postives = 42/69 (60.87%), Query Frame = 0


Query: 6   EQEIMDDGYKWRKYGKK----------------SGCNVKKKVERDREDASYVITTYEGIH 59
           E+  +DDGYKWRKYGKK                  CNVKKK+ERD  +  Y++TTYEG H
Sbjct: 104 EKVALDDGYKWRKYGKKPITGSPFPRHYHKCSSPDCNVKKKIERDTNNPDYILTTYEGRH 163

[Close]

BLAST of Cp4.1LG16g00140 vs. ExPASy Swiss-Prot
Match: Q93WY4 (Probable WRKY transcription factor 12 OS=Arabidopsis thaliana OX=3702 GN=WRKY12 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 1.6e-10
Identity = 39/83 (46.99%), Postives = 46/83 (55.42%), Query Frame = 0


Query: 3   TKSEQEIMDDGYKWRKYGKK----------------SGCNVKKKVERDREDASYVITTYE 62
           TKS+ +++DDGYKWRKYG+K                + C VKK+VER  ED   VITTYE
Sbjct: 137 TKSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYE 196

Query: 63  GIHNHESPFVVYYNQIPSLTSTS 70
           G HNH          IPS  STS
Sbjct: 197 GRHNH----------IPSDDSTS 209

[Close]

BLAST of Cp4.1LG16g00140 vs. ExPASy Swiss-Prot
Match: Q9FFS3 (Probable WRKY transcription factor 24 OS=Arabidopsis thaliana OX=3702 GN=WRKY24 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 1.6e-10
Identity = 30/65 (46.15%), Postives = 43/65 (66.15%), Query Frame = 0


Query: 3   TKSEQEIMDDGYKWRKYGKKS----------------GCNVKKKVERDREDASYVITTYE 52
           T+S+ +++DDGY+WRKYG+KS                 CNVKK+V+R  +D + V+TTYE
Sbjct: 90  TRSDDDVLDDGYRWRKYGQKSVKHNAHPRSYYRCTYHTCNVKKQVQRLAKDPNVVVTTYE 149

[Close]

BLAST of Cp4.1LG16g00140 vs. NCBI nr
Match: KAG7011149.1 (putative WRKY transcription factor 51, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 135 bits (341), Expect = 1.27e-38
Identity = 68/77 (88.31%), Postives = 68/77 (88.31%), Query Frame = 0


Query: 3   TKSEQEIMDDGYKWRKYGKKS---------GCNVKKKVERDREDASYVITTYEGIHNHES 62
           TKSEQEIMDDGYKWRKYGKKS         GCNVKKKVERDREDASYVITTYEGIHNHES
Sbjct: 102 TKSEQEIMDDGYKWRKYGKKSVKNSPNPSEGCNVKKKVERDREDASYVITTYEGIHNHES 161

Query: 63  PFVVYYNQIPSLTSTST 70
           PFVVYYNQIPSLTSTST
Sbjct: 162 PFVVYYNQIPSLTSTST 178

[Close]

BLAST of Cp4.1LG16g00140 vs. NCBI nr
Match: XP_023512174.1 (probable WRKY transcription factor 51 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 133 bits (334), Expect = 2.01e-37
Identity = 68/84 (80.95%), Postives = 68/84 (80.95%), Query Frame = 0


Query: 3   TKSEQEIMDDGYKWRKYGKKS----------------GCNVKKKVERDREDASYVITTYE 62
           TKSEQEIMDDGYKWRKYGKKS                GCNVKKKVERDREDASYVITTYE
Sbjct: 106 TKSEQEIMDDGYKWRKYGKKSVKNSPNPRNYYKCSSEGCNVKKKVERDREDASYVITTYE 165

Query: 63  GIHNHESPFVVYYNQIPSLTSTST 70
           GIHNHESPFVVYYNQIPSLTSTST
Sbjct: 166 GIHNHESPFVVYYNQIPSLTSTST 189

[Close]

BLAST of Cp4.1LG16g00140 vs. NCBI nr
Match: XP_022927982.1 (probable WRKY transcription factor 51 [Cucurbita moschata])

HSP 1 Score: 133 bits (334), Expect = 2.01e-37
Identity = 68/84 (80.95%), Postives = 68/84 (80.95%), Query Frame = 0


Query: 3   TKSEQEIMDDGYKWRKYGKKS----------------GCNVKKKVERDREDASYVITTYE 62
           TKSEQEIMDDGYKWRKYGKKS                GCNVKKKVERDREDASYVITTYE
Sbjct: 106 TKSEQEIMDDGYKWRKYGKKSVKNSPNPRNYYKCSSEGCNVKKKVERDREDASYVITTYE 165

Query: 63  GIHNHESPFVVYYNQIPSLTSTST 70
           GIHNHESPFVVYYNQIPSLTSTST
Sbjct: 166 GIHNHESPFVVYYNQIPSLTSTST 189

[Close]

BLAST of Cp4.1LG16g00140 vs. NCBI nr
Match: XP_022971732.1 (probable WRKY transcription factor 51 [Cucurbita maxima])

HSP 1 Score: 127 bits (319), Expect = 3.77e-35
Identity = 64/84 (76.19%), Postives = 66/84 (78.57%), Query Frame = 0


Query: 3   TKSEQEIMDDGYKWRKYGKKS----------------GCNVKKKVERDREDASYVITTYE 62
           TKSEQEI+DDGYKWRKYGKKS                GCNVKKKVERDRED SYVITTYE
Sbjct: 106 TKSEQEIIDDGYKWRKYGKKSVKNSPNPRNYYKCSSEGCNVKKKVERDREDTSYVITTYE 165

Query: 63  GIHNHESPFVVYYNQIPSLTSTST 70
           GIHNHESPF +YYNQIPSLTSTST
Sbjct: 166 GIHNHESPFALYYNQIPSLTSTST 189

[Close]

BLAST of Cp4.1LG16g00140 vs. NCBI nr
Match: XP_004148451.1 (probable WRKY transcription factor 51 [Cucumis sativus] >KAE8651959.1 hypothetical protein Csa_006699 [Cucumis sativus])

HSP 1 Score: 127 bits (320), Expect = 4.13e-35
Identity = 64/84 (76.19%), Postives = 66/84 (78.57%), Query Frame = 0


Query: 3   TKSEQEIMDDGYKWRKYGKKS----------------GCNVKKKVERDREDASYVITTYE 62
           TKSEQEIMDDGYKWRKYGKKS                GCNVKKKVERDREDA+YVITTYE
Sbjct: 120 TKSEQEIMDDGYKWRKYGKKSVKNSPNPRNYYKCSSEGCNVKKKVERDREDANYVITTYE 179

Query: 63  GIHNHESPFVVYYNQIPSLTSTST 70
           GIHNHESPFVVYYNQ+PS TS ST
Sbjct: 180 GIHNHESPFVVYYNQLPSFTSAST 203

[Close]

BLAST of Cp4.1LG16g00140 vs. ExPASy TrEMBL
Match: A0A6J1EIN3 (probable WRKY transcription factor 51 OS=Cucurbita moschata OX=3662 GN=LOC111434887 PE=4 SV=1)

HSP 1 Score: 133 bits (334), Expect = 9.74e-38
Identity = 68/84 (80.95%), Postives = 68/84 (80.95%), Query Frame = 0


Query: 3   TKSEQEIMDDGYKWRKYGKKS----------------GCNVKKKVERDREDASYVITTYE 62
           TKSEQEIMDDGYKWRKYGKKS                GCNVKKKVERDREDASYVITTYE
Sbjct: 106 TKSEQEIMDDGYKWRKYGKKSVKNSPNPRNYYKCSSEGCNVKKKVERDREDASYVITTYE 165

Query: 63  GIHNHESPFVVYYNQIPSLTSTST 70
           GIHNHESPFVVYYNQIPSLTSTST
Sbjct: 166 GIHNHESPFVVYYNQIPSLTSTST 189

[Close]

BLAST of Cp4.1LG16g00140 vs. ExPASy TrEMBL
Match: A0A0A0LM41 (WRKY domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G297180 PE=4 SV=1)

HSP 1 Score: 127 bits (320), Expect = 1.75e-35
Identity = 64/84 (76.19%), Postives = 66/84 (78.57%), Query Frame = 0


Query: 3   TKSEQEIMDDGYKWRKYGKKS----------------GCNVKKKVERDREDASYVITTYE 62
           TKSEQEIMDDGYKWRKYGKKS                GCNVKKKVERDREDA+YVITTYE
Sbjct: 115 TKSEQEIMDDGYKWRKYGKKSVKNSPNPRNYYKCSSEGCNVKKKVERDREDANYVITTYE 174

Query: 63  GIHNHESPFVVYYNQIPSLTSTST 70
           GIHNHESPFVVYYNQ+PS TS ST
Sbjct: 175 GIHNHESPFVVYYNQLPSFTSAST 198

[Close]

BLAST of Cp4.1LG16g00140 vs. ExPASy TrEMBL
Match: A0A6J1I2S4 (probable WRKY transcription factor 51 OS=Cucurbita maxima OX=3661 GN=LOC111470401 PE=4 SV=1)

HSP 1 Score: 127 bits (319), Expect = 1.83e-35
Identity = 64/84 (76.19%), Postives = 66/84 (78.57%), Query Frame = 0


Query: 3   TKSEQEIMDDGYKWRKYGKKS----------------GCNVKKKVERDREDASYVITTYE 62
           TKSEQEI+DDGYKWRKYGKKS                GCNVKKKVERDRED SYVITTYE
Sbjct: 106 TKSEQEIIDDGYKWRKYGKKSVKNSPNPRNYYKCSSEGCNVKKKVERDREDTSYVITTYE 165

Query: 63  GIHNHESPFVVYYNQIPSLTSTST 70
           GIHNHESPF +YYNQIPSLTSTST
Sbjct: 166 GIHNHESPFALYYNQIPSLTSTST 189

[Close]

BLAST of Cp4.1LG16g00140 vs. ExPASy TrEMBL
Match: A0A1S3C6R2 (probable WRKY transcription factor 51 OS=Cucumis melo OX=3656 GN=LOC103497478 PE=4 SV=1)

HSP 1 Score: 124 bits (310), Expect = 7.82e-34
Identity = 61/83 (73.49%), Postives = 66/83 (79.52%), Query Frame = 0


Query: 3   TKSEQEIMDDGYKWRKYGKKS----------------GCNVKKKVERDREDASYVITTYE 62
           TKSEQEIMDDGYKWRKYGKKS                GCNVKKKVERDREDA+YVITTYE
Sbjct: 128 TKSEQEIMDDGYKWRKYGKKSVKNSPNPRNYYKCSSEGCNVKKKVERDREDANYVITTYE 187

Query: 63  GIHNHESPFVVYYNQIPSLTSTS 69
           GIHNHESPFVVYYNQ+PS T+++
Sbjct: 188 GIHNHESPFVVYYNQLPSFTTST 210

[Close]

BLAST of Cp4.1LG16g00140 vs. ExPASy TrEMBL
Match: A0A6J1DV80 (probable WRKY transcription factor 51 OS=Momordica charantia OX=3673 GN=LOC111024371 PE=4 SV=1)

HSP 1 Score: 121 bits (303), Expect = 4.83e-33
Identity = 61/80 (76.25%), Postives = 62/80 (77.50%), Query Frame = 0


Query: 3   TKSEQEIMDDGYKWRKYGKKS----------------GCNVKKKVERDREDASYVITTYE 62
           TKSEQEIMDDGYKWRKYGKKS                GC VKKKVERDREDASYVITTYE
Sbjct: 110 TKSEQEIMDDGYKWRKYGKKSVKNSPNPRNYYKCSSEGCTVKKKVERDREDASYVITTYE 169

Query: 63  GIHNHESPFVVYYNQIPSLT 66
           GIHNHESPFVVYYNQ+PS T
Sbjct: 170 GIHNHESPFVVYYNQMPSFT 189

[Close]

BLAST of Cp4.1LG16g00140 vs. TAIR 10
Match: AT5G64810.1 (WRKY DNA-binding protein 51 )

HSP 1 Score: 89.0 bits (219), Expect = 1.7e-18
Identity = 43/76 (56.58%), Postives = 55/76 (72.37%), Query Frame = 0


Query: 3   TKSEQEIMDDGYKWRKYGKKS----------------GCNVKKKVERDREDASYVITTYE 62
           T+S+ ++MDDG+KWRKYGKKS                GC+VKK+VERD +DA+YVITTYE
Sbjct: 102 TRSKIDVMDDGFKWRKYGKKSVKNNINKRNYYKCSSEGCSVKKRVERDGDDAAYVITTYE 161

[Close]

BLAST of Cp4.1LG16g00140 vs. TAIR 10
Match: AT5G26170.1 (WRKY DNA-binding protein 50 )

HSP 1 Score: 78.2 bits (191), Expect = 3.0e-15
Identity = 38/67 (56.72%), Postives = 45/67 (67.16%), Query Frame = 0


Query: 3   TKSEQEIMDDGYKWRKYGKK----------------SGCNVKKKVERDREDASYVITTYE 54
           T+SE E++DDG+KWRKYGKK                 GC VKK+VERDR+D S+VITTYE
Sbjct: 105 TRSEVEVLDDGFKWRKYGKKMVKNSPHPRNYYKCSVDGCPVKKRVERDRDDPSFVITTYE 164

[Close]

BLAST of Cp4.1LG16g00140 vs. TAIR 10
Match: AT2G21900.1 (WRKY DNA-binding protein 59 )

HSP 1 Score: 73.6 bits (179), Expect = 7.3e-14
Identity = 36/69 (52.17%), Postives = 42/69 (60.87%), Query Frame = 0


Query: 6   EQEIMDDGYKWRKYGKK----------------SGCNVKKKVERDREDASYVITTYEGIH 59
           E+  +DDGYKWRKYGKK                  CNVKKK+ERD  +  Y++TTYEG H
Sbjct: 104 EKVALDDGYKWRKYGKKPITGSPFPRHYHKCSSPDCNVKKKIERDTNNPDYILTTYEGRH 163

[Close]

BLAST of Cp4.1LG16g00140 vs. TAIR 10
Match: AT2G46130.2 (WRKY DNA-binding protein 43 )

HSP 1 Score: 66.6 bits (161), Expect = 8.9e-12
Identity = 33/61 (54.10%), Postives = 42/61 (68.85%), Query Frame = 0


Query: 3  TKSEQEIMDDGYKWRKYGKKS------------GCNVKKKVERDREDASYVITTYEGIHN 52
          TKS+ +I+DDGY+WRKYG+KS             CNVKK+V+R  ++ S V TTYEGIHN
Sbjct: 10 TKSDADILDDGYRWRKYGQKSVKNSLYPRCTQHMCNVKKQVQRLSKETSIVETTYEGIHN 69

[Close]

BLAST of Cp4.1LG16g00140 vs. TAIR 10
Match: AT1G64000.1 (WRKY DNA-binding protein 56 )

HSP 1 Score: 66.2 bits (160), Expect = 1.2e-11
Identity = 30/65 (46.15%), Postives = 43/65 (66.15%), Query Frame = 0


Query: 3   TKSEQEIMDDGYKWRKYGKKS----------------GCNVKKKVERDREDASYVITTYE 52
           T+S+ +++DDGY+WRKYG+KS                 CNVKK+V+R  +D + V+TTYE
Sbjct: 106 TRSDDDVLDDGYRWRKYGQKSVKNNAHPRSYYRCTYHTCNVKKQVQRLAKDPNVVVTTYE 165

The following BLAST results are available for this feature:

BLAST of Cp4.1LG16g00140 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93WU9	2.4e-17	56.58	Probable WRKY transcription factor 51 OS=Arabidopsis thaliana OX=3702 GN=WRKY51 ...	[more]
Q8VWQ5	4.2e-14	56.72	Probable WRKY transcription factor 50 OS=Arabidopsis thaliana OX=3702 GN=WRKY50 ...	[more]
Q9SJ09	1.0e-12	52.17	Probable WRKY transcription factor 59 OS=Arabidopsis thaliana OX=3702 GN=WRKY59 ...	[more]
Q93WY4	1.6e-10	46.99	Probable WRKY transcription factor 12 OS=Arabidopsis thaliana OX=3702 GN=WRKY12 ...	[more]
Q9FFS3	1.6e-10	46.15	Probable WRKY transcription factor 24 OS=Arabidopsis thaliana OX=3702 GN=WRKY24 ...	[more]

BLAST of Cp4.1LG16g00140 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7011149.1	1.27e-38	88.31	putative WRKY transcription factor 51, partial [Cucurbita argyrosperma subsp. ar...	[more]
XP_023512174.1	2.01e-37	80.95	probable WRKY transcription factor 51 [Cucurbita pepo subsp. pepo]	[more]
XP_022927982.1	2.01e-37	80.95	probable WRKY transcription factor 51 [Cucurbita moschata]	[more]
XP_022971732.1	3.77e-35	76.19	probable WRKY transcription factor 51 [Cucurbita maxima]	[more]
XP_004148451.1	4.13e-35	76.19	probable WRKY transcription factor 51 [Cucumis sativus] >KAE8651959.1 hypothetic...	[more]

BLAST of Cp4.1LG16g00140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EIN3	9.74e-38	80.95	probable WRKY transcription factor 51 OS=Cucurbita moschata OX=3662 GN=LOC111434...	[more]
A0A0A0LM41	1.75e-35	76.19	WRKY domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G297180 PE=4 S...	[more]
A0A6J1I2S4	1.83e-35	76.19	probable WRKY transcription factor 51 OS=Cucurbita maxima OX=3661 GN=LOC11147040...	[more]
A0A1S3C6R2	7.82e-34	73.49	probable WRKY transcription factor 51 OS=Cucumis melo OX=3656 GN=LOC103497478 PE...	[more]
A0A6J1DV80	4.83e-33	76.25	probable WRKY transcription factor 51 OS=Momordica charantia OX=3673 GN=LOC11102...	[more]

BLAST of Cp4.1LG16g00140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G64810.1	1.7e-18	56.58	WRKY DNA-binding protein 51	[more]
AT5G26170.1	3.0e-15	56.72	WRKY DNA-binding protein 50	[more]
AT2G21900.1	7.3e-14	52.17	WRKY DNA-binding protein 59	[more]
AT2G46130.2	8.9e-12	54.10	WRKY DNA-binding protein 43	[more]
AT1G64000.1	1.2e-11	46.15	WRKY DNA-binding protein 56	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003657	WRKY domain	SMART	SM00774	WRKY_cls	coord: 10..53 e-value: 9.3E-14 score: 61.7
IPR003657	WRKY domain	PFAM	PF03106	WRKY	coord: 22..52 e-value: 7.1E-7 score: 29.4
IPR003657	WRKY domain	PROSITE	PS50811	WRKY	coord: 5..54 score: 16.627371
IPR036576	WRKY domain superfamily	GENE3D	2.20.25.80	WRKY domain	coord: 23..55 e-value: 5.1E-10 score: 41.0
IPR036576	WRKY domain superfamily	GENE3D	2.20.25.80	WRKY domain	coord: 1..22 e-value: 4.5E-7 score: 31.5
IPR036576	WRKY domain superfamily	SUPERFAMILY	118290	WRKY DNA-binding domain	coord: 4..54
None	No IPR available	PANTHER	PTHR31221:SF171	OS05G0537100 PROTEIN	coord: 3..63
IPR044810	WRKY transcription factor, plant	PANTHER	PTHR31221	WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED	coord: 3..63

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG16g00140.1	Cp4.1LG16g00140.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding