Cp4.1LG15g08340 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG15g08340
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	multiprotein bridging factor 1B
Location	Cp4.1LG15: 8223472 .. 8225839 (-)
RNA-Seq Expression	Cp4.1LG15g08340
Synteny	Cp4.1LG15g08340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGGTGACGATATCTGGAAGTCTATATTTTATTACCGCCAGCCGGGCGTGCGGGAATATCGAGTTTTCATCTCTATTTAGTTTTTCCACATATCTCCGAACCCTAAGTTCCCGCGGCAAATCGTTCTCGACAGCAGCTGTTGCAGGAGCACGTAGAGGAGAGGGAAATGGCTGGGATTGGACCGATTTCGCAGGATTGGGAACCGGTTGTCATCAGGAAGAAGGCACCCAATGCCGCCGCCAAAAAGGACGAGAAAGCCGTAAACGCCGCCCGTCGGGCCGGTGCTGAGATCGAAACCTCAAGGAAATGTTTGTTCCTATTTCCATCTCTCTCTTCTGTTGTCTTTCTCATATTAATACGCTATCAAGAACGTTAATCCTGCAACAGTTTTTTTTTTTTTTCTTTTATGTTTCTGGCATGGTTCTTGATCTTGAGTTTGAGATGTCATTATCGTGTTCTTTTTTACTGAAACGGTATTCGACTGTAGTTGACATATGGAAGCGTTGCCTTAACAGGATTATTGAAGTACGAGACCGTGGAATATAGTTATATGATATCTTAAGGAATCCAAATGATCATTTGTTTATCGTGTTCAGATGTTTGTTCGAATTCATAGATGATGAACTCGTACTGTGTTGCTTTGTTTGTTGAAATTTGATGCTGTCTTTCTTGTTTAAATAATGATTATATGTTTTTCATTTTTGGGCCATTTAGTTCTTTCTTTCTTTATCTATGTGGTGCTCATGAAATTAATTGACTAATTACTTCATTTCTTGAATGCTCTAAGTCCCGTCCTTCCTTCGTCTTCATGTGCCCAAACTTCTTATTGAAGGAAATATTATAAACATTGTAGTATGAATTCATTTCACATATGTTCCAGAAAGAATTGAAAAAAGAAAAGAAAATCAATTTGTTCATTTCAGATTAATTTCTTTATGGGATTTGTAATCGACATTAATCTGAAATGAGCAAATTCTTTGAATGTATCTTTGAATGTTTTCTGATTTCTCCCCTTTTCTGTAGCAAATGCCGGAACGAACAAAGCTGCTTCCAGCAGTACCAGTTTGAATACCAGGAAGTTGGATGATGAGACAGAAAACCTCACTCGTGAGTACTTCAGATCCCTACTTCATTGTGGAGATAAATTTAGGCAGTTTCTAAATGGCATATAATGAATCAACTTTGAAACTTGCGGTTTATTCTTTAACAATACTATTTCATGCTAGTGTTCATATTTTTTTGATCTCATTATTTTTATTGAGTTTATTATGTAAGTATGTTGGTGTATTCAAAAGAACATTTAATATGTGCATAGGAAGAACAGAGCATTATGTGAATTTCAAGTCGTTAAGAGCACTACTAGGATAATATGTAGGAGTATTATTAGGTTTGTAATGGCATTGGTTTGGAAGTTACTATACTGCTTTACTAGTATATGACTAAAGAGAAATTATTCTATAATTCAATAATAATCCAAAGTATATTGCAACACCGGTATTTATACTAGTGAGTCGAAGCCGAAACGGTTAGCGAACGAACTAACAATCAACTAATGTGAGTAGATATGAGAAGATCTAATCCATGTAGCCCTTTGAATACTATCTATTCTATGAGAAGAAGCAATTGTTTGTTATCTTCGTCGTAAGTTGGGATAATGTCGGTGACGAAGCTTCCCTCCATGGTTCTGTGATTCAATTAAGATATATATCTATCTATCTAATGAAATAAATGATAAGAGCTAAGTTTGACAATATTTGTATGTTTTTTATCCAACTTCTGGTGTATTTCAACCTCAGATGACCGGGTGCCAACTGAGCTGAAGAAGGCAATTATGCAAGCCCGTACTGAAAAGAAACTTACACAGTCGCAGCTTGCTCAAGTATGTATCTTTGTGTTTACATGCTTTTTACCCATATTATTCTTTTTTGACGGAGACATGACAAACTTTTGGTTGGTCTTTTACTACTAGTTGATCAATGAGAAGCCACAAATCATTCAGGAGTATGAATCTGGGAAGGCCATTCCAAATCAACAAATTATCACCAAGCTTGAGAGAGCTCTTGGAACCAAGCTTCGTGGGAAAAAGTAGGAGCCCTCCTTTGGTAATGGTAATGTAAGTGGTGAATTTGGGTATAAAAGAGCTTTGGCTTGGCTTCAGATAATAACTTATGATGATGCGTCCTTGCTCTTGGGTTGTGATCCGAGTATGTACTGTGAATTAGTTTAGCTTGTTTGTCTCTTGTATCTATCTACTTTGACTTTTCTATTCTAATGAACACTTATAATGAACACTTATATTTTCGAGTCTGTCGTTTTTGGATTAATCCTTATTATTTACATAATAATTGAATTTATTTTAAGTTTT

mRNA sequence

ATGAGGGTGACGATATCTGGAAGTCTATATTTTATTACCGCCAGCCGGGCGTGCGGGAATATCGAGTTTTCATCTCTATTTAGTTTTTCCACATATCTCCGAACCCTAAGTTCCCGCGGCAAATCGTTCTCGACAGCAGCTGTTGCAGGAGCACGTAGAGGAGAGGGAAATGGCTGGGATTGGACCGATTTCGCAGGATTGGGAACCGGTTGTCATCAGGAAGAAGGCACCCAATGCCGCCGCCAAAAAGGACGAGAAAGCCGTAAACGCCGCCCGTCGGGCCGGTGCTGAGATCGAAACCTCAAGGAAATCAAATGCCGGAACGAACAAAGCTGCTTCCAGCAGTACCAGTTTGAATACCAGGAAGTTGGATGATGAGACAGAAAACCTCACTCATGACCGGGTGCCAACTGAGCTGAAGAAGGCAATTATGCAAGCCCGTACTGAAAAGAAACTTACACAGTCGCAGCTTGCTCAATTGATCAATGAGAAGCCACAAATCATTCAGGAGTATGAATCTGGGAAGGCCATTCCAAATCAACAAATTATCACCAAGCTTGAGAGAGCTCTTGGAACCAAGCTTCGTGGGAAAAAGTAGGAGCCCTCCTTTGGTAATGGTAATGTAAGTGGTGAATTTGGGTATAAAAGAGCTTTGGCTTGGCTTCAGATAATAACTTATGATGATGCGTCCTTGCTCTTGGGTTGTGATCCGAGTATGTACTGTGAATTAGTTTAGCTTGTTTGTCTCTTGTATCTATCTACTTTGACTTTTCTATTCTAATGAACACTTATAATGAACACTTATATTTTCGAGTCTGTCGTTTTTGGATTAATCCTTATTATTTACATAATAATTGAATTTATTTTAAGTTTT

Coding sequence (CDS)

ATGGCTGGGATTGGACCGATTTCGCAGGATTGGGAACCGGTTGTCATCAGGAAGAAGGCACCCAATGCCGCCGCCAAAAAGGACGAGAAAGCCGTAAACGCCGCCCGTCGGGCCGGTGCTGAGATCGAAACCTCAAGGAAATCAAATGCCGGAACGAACAAAGCTGCTTCCAGCAGTACCAGTTTGAATACCAGGAAGTTGGATGATGAGACAGAAAACCTCACTCATGACCGGGTGCCAACTGAGCTGAAGAAGGCAATTATGCAAGCCCGTACTGAAAAGAAACTTACACAGTCGCAGCTTGCTCAATTGATCAATGAGAAGCCACAAATCATTCAGGAGTATGAATCTGGGAAGGCCATTCCAAATCAACAAATTATCACCAAGCTTGAGAGAGCTCTTGGAACCAAGCTTCGTGGGAAAAAGTAG

Protein sequence

MAGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETSRKSNAGTNKAASSSTSLNTRKLDDETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQIIQEYESGKAIPNQQIITKLERALGTKLRGKK

Homology

[Close]

BLAST of Cp4.1LG15g08340 vs. ExPASy Swiss-Prot
Match: Q9LXT3 (Multiprotein-bridging factor 1b OS=Arabidopsis thaliana OX=3702 GN=MBF1B PE=1 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 7.8e-60
Identity = 123/142 (86.62%), Postives = 135/142 (95.07%), Query Frame = 0


Query: 1   MAGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETSRKSNAGTNKAASSST 60
           MAGIGPI+QDWEPVVIRK+APNAAAK+DEK VNAARR+GA+IET RK NAG+NKAASS T
Sbjct: 1   MAGIGPITQDWEPVVIRKRAPNAAAKRDEKTVNAARRSGADIETVRKFNAGSNKAASSGT 60

Query: 61  SLNTRKLDDETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNT+KLDD+TENL+HDRVPTELKKAIMQAR EKKLTQSQLA LINEKPQ+IQEYESGKA
Sbjct: 61  SLNTKKLDDDTENLSHDRVPTELKKAIMQARGEKKLTQSQLAHLINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 143
           IPNQQI++KLERALG KLRGKK
Sbjct: 121 IPNQQILSKLERALGAKLRGKK 142

[Close]

BLAST of Cp4.1LG15g08340 vs. ExPASy Swiss-Prot
Match: Q9SJI8 (Multiprotein-bridging factor 1a OS=Arabidopsis thaliana OX=3702 GN=MBF1A PE=2 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 3.0e-59
Identity = 122/142 (85.92%), Postives = 134/142 (94.37%), Query Frame = 0


Query: 1   MAGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETSRKSNAGTNKAASSST 60
           MAGIGPI+QDWEPVVIRKK  NAAAK+DEK VNAARR+GA+IET RK NAGTNKAASS T
Sbjct: 1   MAGIGPITQDWEPVVIRKKPANAAAKRDEKTVNAARRSGADIETVRKFNAGTNKAASSGT 60

Query: 61  SLNTRKLDDETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNT+ LDD+TENLTH+RVPTELKKAIMQART+KKLTQSQLAQ+INEKPQ+IQEYESGKA
Sbjct: 61  SLNTKMLDDDTENLTHERVPTELKKAIMQARTDKKLTQSQLAQIINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 143
           IPNQQI++KLERALG KLRGKK
Sbjct: 121 IPNQQILSKLERALGAKLRGKK 142

[Close]

BLAST of Cp4.1LG15g08340 vs. ExPASy Swiss-Prot
Match: Q9LV58 (Multiprotein-bridging factor 1c OS=Arabidopsis thaliana OX=3702 GN=MBF1C PE=1 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.1e-28
Identity = 68/139 (48.92%), Postives = 99/139 (71.22%), Query Frame = 0


Query: 5   GPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETSRKSNAGTNKAASSST--SL 64
           G ++QDWEPVV+ K    +   +D KAVNAA R G  ++T +K +AG+NK   S+    +
Sbjct: 7   GAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKSTAVPVI 66

Query: 65  NTRKLDDETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQIIQEYESGKAIP 124
           NT+KL++ETE    DRV  E++  I +AR EKK++Q+ LA+ INE+ Q++QEYE+GKA+P
Sbjct: 67  NTKKLEEETEPAAMDRVKAEVRLMIQKARLEKKMSQADLAKQINERTQVVQEYENGKAVP 126

Query: 125 NQQIITKLERALGTKLRGK 142
           NQ ++ K+E+ LG KLRGK
Sbjct: 127 NQAVLAKMEKVLGVKLRGK 145

[Close]

BLAST of Cp4.1LG15g08340 vs. ExPASy Swiss-Prot
Match: Q6GPQ6 (Endothelial differentiation-related factor 1 homolog OS=Xenopus laevis OX=8355 GN=edf1 PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.7e-28
Identity = 74/133 (55.64%), Postives = 93/133 (69.92%), Query Frame = 0


Query: 10  DWEPV-VIRKKAPNAAAKKDEKAVNAARRAGAEIETSRKSNAGTNKAASSSTSLNTRKLD 69
           DW+ V V+RKK P AA  K ++A+ AA+R G E+ETS+K +AG NK    + + NT KLD
Sbjct: 5   DWDTVTVLRKKGPTAAQAKSKQAITAAQRRGEEVETSKKWSAGQNK--QHTITRNTAKLD 64

Query: 70  DETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQIIQEYESGKAIPNQQIIT 129
            ETE L HDRVP E+ K I Q R  K +TQ  LA  INEKPQ+I +YE GKAIPN Q++ 
Sbjct: 65  RETEELHHDRVPLEVGKVIQQGRQGKGMTQKDLATKINEKPQVIADYECGKAIPNNQVMG 124

Query: 130 KLERALGTKLRGK 142
           K+ER +G KLRGK
Sbjct: 125 KIERVIGLKLRGK 135

[Close]

BLAST of Cp4.1LG15g08340 vs. ExPASy Swiss-Prot
Match: Q5ZMC0 (Endothelial differentiation-related factor 1 homolog OS=Gallus gallus OX=9031 GN=EDF1 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 4.6e-28
Identity = 75/133 (56.39%), Postives = 94/133 (70.68%), Query Frame = 0


Query: 10  DWEPV-VIRKKAPNAAAKKDEKAVNAARRAGAEIETSRKSNAGTNKAASSSTSLNTRKLD 69
           DW+ V V+RKK P+AA  K ++AV AA+R G ++ETS+K  AG NK      + NT KLD
Sbjct: 5   DWDTVTVLRKKGPSAAQAKSKQAVLAAQRRGEDVETSKKWAAGQNK--QHFITKNTAKLD 64

Query: 70  DETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQIIQEYESGKAIPNQQIIT 129
            ETE L HDRVP E+ K I Q R  K +TQ  LA  INEKPQ+I +YESG+AIPN Q++ 
Sbjct: 65  RETEELHHDRVPLEVGKVIQQGRQSKGMTQKDLATKINEKPQVIADYESGRAIPNNQVMG 124

Query: 130 KLERALGTKLRGK 142
           K+ERA+G KLRGK
Sbjct: 125 KIERAIGLKLRGK 135

[Close]

BLAST of Cp4.1LG15g08340 vs. NCBI nr
Match: XP_022969265.1 (multiprotein-bridging factor 1b-like [Cucurbita maxima] >XP_023553638.1 multiprotein-bridging factor 1b-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 255 bits (651), Expect = 4.94e-85
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   MAGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETSRKSNAGTNKAASSST 60
           MAGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETSRKSNAGTNKAASSST
Sbjct: 1   MAGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETSRKSNAGTNKAASSST 60

Query: 61  SLNTRKLDDETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNTRKLDDETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQIIQEYESGKA
Sbjct: 61  SLNTRKLDDETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQIIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 142
           IPNQQIITKLERALGTKLRGKK
Sbjct: 121 IPNQQIITKLERALGTKLRGKK 142

[Close]

BLAST of Cp4.1LG15g08340 vs. NCBI nr
Match: XP_022952433.1 (multiprotein-bridging factor 1b-like [Cucurbita moschata])

HSP 1 Score: 252 bits (644), Expect = 5.76e-84
Identity = 140/142 (98.59%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 1   MAGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETSRKSNAGTNKAASSST 60
           MAGIGPISQDWEP+VIRKKAPNAAAKKDEKAVNAARRAGAEIET RKSNAGTNKAASSST
Sbjct: 1   MAGIGPISQDWEPIVIRKKAPNAAAKKDEKAVNAARRAGAEIETLRKSNAGTNKAASSST 60

Query: 61  SLNTRKLDDETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNTRKLDDETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQIIQEYESGKA
Sbjct: 61  SLNTRKLDDETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQIIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 142
           IPNQQIITKLERALGTKLRGKK
Sbjct: 121 IPNQQIITKLERALGTKLRGKK 142

[Close]

BLAST of Cp4.1LG15g08340 vs. NCBI nr
Match: KAG7011997.1 (Multiprotein-bridging factor 1b [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 249 bits (635), Expect = 1.36e-82
Identity = 139/142 (97.89%), Postives = 140/142 (98.59%), Query Frame = 0


Query: 1   MAGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETSRKSNAGTNKAASSST 60
           MAGI PISQDWEP+VIRKKAPNAAAKKDEKAVNAARRAGAEIET RKSNAGTNKAASSST
Sbjct: 1   MAGIVPISQDWEPIVIRKKAPNAAAKKDEKAVNAARRAGAEIETLRKSNAGTNKAASSST 60

Query: 61  SLNTRKLDDETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNTRKLDDETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQIIQEYESGKA
Sbjct: 61  SLNTRKLDDETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQIIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 142
           IPNQQIITKLERALGTKLRGKK
Sbjct: 121 IPNQQIITKLERALGTKLRGKK 142

[Close]

BLAST of Cp4.1LG15g08340 vs. NCBI nr
Match: XP_038888605.1 (multiprotein-bridging factor 1b [Benincasa hispida])

HSP 1 Score: 248 bits (633), Expect = 2.74e-82
Identity = 138/142 (97.18%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 1   MAGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETSRKSNAGTNKAASSST 60
           M GIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIET +KSNAGTNKAASSST
Sbjct: 1   MTGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSST 60

Query: 61  SLNTRKLDDETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNTRKLDDETENL HDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQIIQEYESGKA
Sbjct: 61  SLNTRKLDDETENLAHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQIIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 142
           IPNQQIITKLERALGTKLRGKK
Sbjct: 121 IPNQQIITKLERALGTKLRGKK 142

[Close]

BLAST of Cp4.1LG15g08340 vs. NCBI nr
Match: XP_022148069.1 (multiprotein-bridging factor 1a [Momordica charantia])

HSP 1 Score: 248 bits (632), Expect = 3.89e-82
Identity = 136/142 (95.77%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 1   MAGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETSRKSNAGTNKAASSST 60
           M+GIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARR+GAEIET +KSNAGTNKAASSST
Sbjct: 1   MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRSGAEIETLKKSNAGTNKAASSST 60

Query: 61  SLNTRKLDDETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNTRKLDDETENLTHDRVPTELKKAIMQART+KKLTQSQLAQLINEKPQ+IQEYESGKA
Sbjct: 61  SLNTRKLDDETENLTHDRVPTELKKAIMQARTDKKLTQSQLAQLINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 142
           IPNQQIITKLERALGTKLRGKK
Sbjct: 121 IPNQQIITKLERALGTKLRGKK 142

[Close]

BLAST of Cp4.1LG15g08340 vs. ExPASy TrEMBL
Match: A0A6J1HZG6 (multiprotein-bridging factor 1b-like OS=Cucurbita maxima OX=3661 GN=LOC111468320 PE=4 SV=1)

HSP 1 Score: 255 bits (651), Expect = 2.39e-85
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   MAGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETSRKSNAGTNKAASSST 60
           MAGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETSRKSNAGTNKAASSST
Sbjct: 1   MAGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETSRKSNAGTNKAASSST 60

Query: 61  SLNTRKLDDETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNTRKLDDETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQIIQEYESGKA
Sbjct: 61  SLNTRKLDDETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQIIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 142
           IPNQQIITKLERALGTKLRGKK
Sbjct: 121 IPNQQIITKLERALGTKLRGKK 142

[Close]

BLAST of Cp4.1LG15g08340 vs. ExPASy TrEMBL
Match: A0A6J1GKJ7 (multiprotein-bridging factor 1b-like OS=Cucurbita moschata OX=3662 GN=LOC111455121 PE=4 SV=1)

HSP 1 Score: 252 bits (644), Expect = 2.79e-84
Identity = 140/142 (98.59%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 1   MAGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETSRKSNAGTNKAASSST 60
           MAGIGPISQDWEP+VIRKKAPNAAAKKDEKAVNAARRAGAEIET RKSNAGTNKAASSST
Sbjct: 1   MAGIGPISQDWEPIVIRKKAPNAAAKKDEKAVNAARRAGAEIETLRKSNAGTNKAASSST 60

Query: 61  SLNTRKLDDETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNTRKLDDETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQIIQEYESGKA
Sbjct: 61  SLNTRKLDDETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQIIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 142
           IPNQQIITKLERALGTKLRGKK
Sbjct: 121 IPNQQIITKLERALGTKLRGKK 142

[Close]

BLAST of Cp4.1LG15g08340 vs. ExPASy TrEMBL
Match: A0A6J1D2X2 (multiprotein-bridging factor 1a OS=Momordica charantia OX=3673 GN=LOC111016839 PE=4 SV=1)

HSP 1 Score: 248 bits (632), Expect = 1.89e-82
Identity = 136/142 (95.77%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 1   MAGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETSRKSNAGTNKAASSST 60
           M+GIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARR+GAEIET +KSNAGTNKAASSST
Sbjct: 1   MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRSGAEIETLKKSNAGTNKAASSST 60

Query: 61  SLNTRKLDDETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNTRKLDDETENLTHDRVPTELKKAIMQART+KKLTQSQLAQLINEKPQ+IQEYESGKA
Sbjct: 61  SLNTRKLDDETENLTHDRVPTELKKAIMQARTDKKLTQSQLAQLINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 142
           IPNQQIITKLERALGTKLRGKK
Sbjct: 121 IPNQQIITKLERALGTKLRGKK 142

[Close]

BLAST of Cp4.1LG15g08340 vs. ExPASy TrEMBL
Match: A0A6J1JEK2 (multiprotein-bridging factor 1a OS=Cucurbita maxima OX=3661 GN=LOC111486196 PE=4 SV=1)

HSP 1 Score: 243 bits (621), Expect = 8.96e-81
Identity = 134/142 (94.37%), Postives = 140/142 (98.59%), Query Frame = 0


Query: 1   MAGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETSRKSNAGTNKAASSST 60
           M+GIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIET +KSNAGTNKAASS T
Sbjct: 1   MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGT 60

Query: 61  SLNTRKLDDETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNTRKLDDETENL+H++VPTELKKAIMQART+KKLTQSQLAQLINEKPQIIQEYESGKA
Sbjct: 61  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 142
           IPNQQIITKLERALGTKLRGKK
Sbjct: 121 IPNQQIITKLERALGTKLRGKK 142

[Close]

BLAST of Cp4.1LG15g08340 vs. ExPASy TrEMBL
Match: A0A6J1EWB8 (multiprotein-bridging factor 1a OS=Cucurbita moschata OX=3662 GN=LOC111437149 PE=4 SV=1)

HSP 1 Score: 243 bits (621), Expect = 8.96e-81
Identity = 134/142 (94.37%), Postives = 140/142 (98.59%), Query Frame = 0


Query: 1   MAGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETSRKSNAGTNKAASSST 60
           M+GIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIET +KSNAGTNKAASS T
Sbjct: 1   MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGT 60

Query: 61  SLNTRKLDDETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNTRKLDDETENL+H++VPTELKKAIMQART+KKLTQSQLAQLINEKPQIIQEYESGKA
Sbjct: 61  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 142
           IPNQQIITKLERALGTKLRGKK
Sbjct: 121 IPNQQIITKLERALGTKLRGKK 142

[Close]

BLAST of Cp4.1LG15g08340 vs. TAIR 10
Match: AT3G58680.1 (multiprotein bridging factor 1B )

HSP 1 Score: 231.1 bits (588), Expect = 5.5e-61
Identity = 123/142 (86.62%), Postives = 135/142 (95.07%), Query Frame = 0


Query: 1   MAGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETSRKSNAGTNKAASSST 60
           MAGIGPI+QDWEPVVIRK+APNAAAK+DEK VNAARR+GA+IET RK NAG+NKAASS T
Sbjct: 1   MAGIGPITQDWEPVVIRKRAPNAAAKRDEKTVNAARRSGADIETVRKFNAGSNKAASSGT 60

Query: 61  SLNTRKLDDETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNT+KLDD+TENL+HDRVPTELKKAIMQAR EKKLTQSQLA LINEKPQ+IQEYESGKA
Sbjct: 61  SLNTKKLDDDTENLSHDRVPTELKKAIMQARGEKKLTQSQLAHLINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 143
           IPNQQI++KLERALG KLRGKK
Sbjct: 121 IPNQQILSKLERALGAKLRGKK 142

[Close]

BLAST of Cp4.1LG15g08340 vs. TAIR 10
Match: AT2G42680.1 (multiprotein bridging factor 1A )

HSP 1 Score: 229.2 bits (583), Expect = 2.1e-60
Identity = 122/142 (85.92%), Postives = 134/142 (94.37%), Query Frame = 0


Query: 1   MAGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETSRKSNAGTNKAASSST 60
           MAGIGPI+QDWEPVVIRKK  NAAAK+DEK VNAARR+GA+IET RK NAGTNKAASS T
Sbjct: 1   MAGIGPITQDWEPVVIRKKPANAAAKRDEKTVNAARRSGADIETVRKFNAGTNKAASSGT 60

Query: 61  SLNTRKLDDETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNT+ LDD+TENLTH+RVPTELKKAIMQART+KKLTQSQLAQ+INEKPQ+IQEYESGKA
Sbjct: 61  SLNTKMLDDDTENLTHERVPTELKKAIMQARTDKKLTQSQLAQIINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 143
           IPNQQI++KLERALG KLRGKK
Sbjct: 121 IPNQQILSKLERALGAKLRGKK 142

[Close]

BLAST of Cp4.1LG15g08340 vs. TAIR 10
Match: AT3G24500.1 (multiprotein bridging factor 1C )

HSP 1 Score: 126.7 bits (317), Expect = 1.5e-29
Identity = 68/139 (48.92%), Postives = 99/139 (71.22%), Query Frame = 0


Query: 5   GPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETSRKSNAGTNKAASSST--SL 64
           G ++QDWEPVV+ K    +   +D KAVNAA R G  ++T +K +AG+NK   S+    +
Sbjct: 7   GAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKSTAVPVI 66

Query: 65  NTRKLDDETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQIIQEYESGKAIP 124
           NT+KL++ETE    DRV  E++  I +AR EKK++Q+ LA+ INE+ Q++QEYE+GKA+P
Sbjct: 67  NTKKLEEETEPAAMDRVKAEVRLMIQKARLEKKMSQADLAKQINERTQVVQEYENGKAVP 126

Query: 125 NQQIITKLERALGTKLRGK 142
           NQ ++ K+E+ LG KLRGK
Sbjct: 127 NQAVLAKMEKVLGVKLRGK 145

[Close]

BLAST of Cp4.1LG15g08340 vs. TAIR 10
Match: AT3G24500.2 (multiprotein bridging factor 1C )

HSP 1 Score: 60.8 bits (146), Expect = 9.9e-10
Identity = 37/89 (41.57%), Postives = 56/89 (62.92%), Query Frame = 0


Query: 5  GPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETSRKSNAGTNKAASSST--SL 64
          G ++QDWEPVV+ K    +   +D KAVNAA R G  ++T +K +AG+NK   S+    +
Sbjct: 7  GAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKSTAVPVI 66

Query: 65 NTRKLDDETENLTHDRVPTELKKAIMQAR 92
          NT+KL++ETE    DRV  E++  + + R
Sbjct: 67 NTKKLEEETEPAAMDRVKAEVRLCLRRWR 95

The following BLAST results are available for this feature:

BLAST of Cp4.1LG15g08340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LXT3	7.8e-60	86.62	Multiprotein-bridging factor 1b OS=Arabidopsis thaliana OX=3702 GN=MBF1B PE=1 SV...	[more]
Q9SJI8	3.0e-59	85.92	Multiprotein-bridging factor 1a OS=Arabidopsis thaliana OX=3702 GN=MBF1A PE=2 SV...	[more]
Q9LV58	2.1e-28	48.92	Multiprotein-bridging factor 1c OS=Arabidopsis thaliana OX=3702 GN=MBF1C PE=1 SV...	[more]
Q6GPQ6	2.7e-28	55.64	Endothelial differentiation-related factor 1 homolog OS=Xenopus laevis OX=8355 G...	[more]
Q5ZMC0	4.6e-28	56.39	Endothelial differentiation-related factor 1 homolog OS=Gallus gallus OX=9031 GN...	[more]

BLAST of Cp4.1LG15g08340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022969265.1	4.94e-85	100.00	multiprotein-bridging factor 1b-like [Cucurbita maxima] >XP_023553638.1 multipro...	[more]
XP_022952433.1	5.76e-84	98.59	multiprotein-bridging factor 1b-like [Cucurbita moschata]	[more]
KAG7011997.1	1.36e-82	97.89	Multiprotein-bridging factor 1b [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_038888605.1	2.74e-82	97.18	multiprotein-bridging factor 1b [Benincasa hispida]	[more]
XP_022148069.1	3.89e-82	95.77	multiprotein-bridging factor 1a [Momordica charantia]	[more]

BLAST of Cp4.1LG15g08340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HZG6	2.39e-85	100.00	multiprotein-bridging factor 1b-like OS=Cucurbita maxima OX=3661 GN=LOC111468320...	[more]
A0A6J1GKJ7	2.79e-84	98.59	multiprotein-bridging factor 1b-like OS=Cucurbita moschata OX=3662 GN=LOC1114551...	[more]
A0A6J1D2X2	1.89e-82	95.77	multiprotein-bridging factor 1a OS=Momordica charantia OX=3673 GN=LOC111016839 P...	[more]
A0A6J1JEK2	8.96e-81	94.37	multiprotein-bridging factor 1a OS=Cucurbita maxima OX=3661 GN=LOC111486196 PE=4...	[more]
A0A6J1EWB8	8.96e-81	94.37	multiprotein-bridging factor 1a OS=Cucurbita moschata OX=3662 GN=LOC111437149 PE...	[more]

BLAST of Cp4.1LG15g08340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G58680.1	5.5e-61	86.62	multiprotein bridging factor 1B	[more]
AT2G42680.1	2.1e-60	85.92	multiprotein bridging factor 1A	[more]
AT3G24500.1	1.5e-29	48.92	multiprotein bridging factor 1C	[more]
AT3G24500.2	9.9e-10	41.57	multiprotein bridging factor 1C	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 87..107
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..64
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..81
None	No IPR available	PANTHER	PTHR10245	ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1	coord: 1..142
None	No IPR available	PANTHER	PTHR10245:SF118	MULTIPROTEIN BRIDGING FACTOR 1B	coord: 1..142
IPR001387	Cro/C1-type helix-turn-helix domain	SMART	SM00530	mbf_short4	coord: 86..141 e-value: 8.5E-11 score: 51.9
IPR001387	Cro/C1-type helix-turn-helix domain	PFAM	PF01381	HTH_3	coord: 87..138 e-value: 5.0E-13 score: 48.9
IPR001387	Cro/C1-type helix-turn-helix domain	PROSITE	PS50943	HTH_CROC1	coord: 87..141 score: 12.470541
IPR001387	Cro/C1-type helix-turn-helix domain	CDD	cd00093	HTH_XRE	coord: 85..138 e-value: 1.54026E-9 score: 48.7034
IPR013729	Multiprotein bridging factor 1, N-terminal	PFAM	PF08523	MBF1	coord: 9..79 e-value: 3.7E-23 score: 81.7
IPR010982	Lambda repressor-like, DNA-binding domain superfamily	GENE3D	1.10.260.40		coord: 71..142 e-value: 3.6E-29 score: 102.1
IPR010982	Lambda repressor-like, DNA-binding domain superfamily	SUPERFAMILY	47413	lambda repressor-like DNA-binding domains	coord: 80..138

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG15g08340.1	Cp4.1LG15g08340.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding