Cp4.1LG15g04980 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCAATATACAGAGCCCAATTAATCCCAGGCCCAATCCACTTCATCATCTCCATTGTTCACTGGTATATAGCTGTGCTTGAGCCCAATAGTAGCTTGGTTTGAATTCAAATCAAATCCAGAGCTCTCTGTAGTGGCGCTCGAAATTCTCTCGAGAGAGCCCATCACCAGAAAAATCGAAGGGAACAAGCTTCAGTTCCGCGACAGAAATCTACAACGGTCAGATTCTTGCTTCACTTTCTTGCTCTTTTTGCTCTCTTTGCCGATTTGAGGGATTGGAGACGGATCTTCCGCTGCTGTTTGGTTTCCAGGAAAATGGTGGAATCGAACTTGACTTACGAGGAATGCCGACGCCAGAGGTTGGAGGAGAATAAGAAGAGGATGGAAGAGCTTAATCTCAACAAGCTAGCCGATGCTCTGAAATCTTCCAGCCCTAAATCCTCTCCGGTAGGTTTCCGTTGTTCAAAATAGTTTATGATCTAATATCAATGAGTTTAAAACTTGATCTCTCTGTGGAAGACGAAGCAGCTAAAGCGTCCTCGTCAGCCACTCGATATCTCGTCCTTAAGTGTGAGAAGATCCAGCCGTTTTGCGGATAAGCCCCCTCCAAGCTATAAGGAGGTAGGCTTTGAGTTCTTCGTTTTGATTATCCTTTCAGAGAAGGAATGCTGTAGTTTTTTAACAGTGGCCATTTTGAATGCTATTATATTGTTCTCACTGAAATGACACGCTTAATTAAGCTTTTACAGTGAAAAGTGTTGTTCAATGGTTGGTCAGTTTCTAATTTAATCATTTAGTTATAGCTGAATGCTTAAATCTTATTGGTATTTGCAGGAGCCCATTGAACCACTTGCAGGTTTAAGAAGGTATGCAAAATAAAAAATCCTGTTTCGAATTACTTTACACTATTTGGTGTCTTTTTCACTTAAAAACGCGATAAAATTGGACGAATAGGACTTATCAAAGGAGGGATTTGTTGAATCGGGTTTATGCTTCAGATGTGGAAAGGCAATATGCCATTGACAGAGCACGAGACCTTCAATCTAGCCTAGAATCTAGATACCCAAGTTTTGTGAAGCCCATGCTTCAATCACATGTCACCGGGGGATTTTGGCTGGTCAGTTTATGATATCATTTTACTGAATTTTCAGCTTTGATTGGTTATATAAAGCTTATAATTTGACGAAGTATATTGTCTTATTGAGTTTCCTATAGGGTCTTCCAGTTCATTTTTGCAAGGCACACCTTCCCCTTGAGGATGAAATGTTAACTCTGGTGGACGAGGATGAAAATGAGTTCCAAACAAAATACCTTGCCGAAAAAACAGGTCTTAGTGGTGGTTGGAGAGGGTTTTCCATTGATCACCAGTTAGTAGATGGGGATACTTTGGTGTTTCAGTTAACTAAGCCGACTGAATTCAAGGTGATTACATGGAAAAGAAAATTATATTCTGTCTTGGCCAAGCATCTTTTCATGTGATTCAAGTTTAATGGGTCTATGCACAATTAATCTAGCACATTTAGTTTGAGGTTTAGGACACCGTACAGTCATATTTTATCTTACATATAGTATAGTTCATATCCATAAGAAGTAAATGCACGTCTTGAACAGTACTAGCTTCTTCAAAACATGTAGGAAACTGATTATAGCTGTTTGTTGCCATAGACAAGGGGAATACATTTTGGAAGTGGGGGGAGGCAGGATGGGATATTCAAGGCAGCGGTTTGTAGAGATTCTTAAGCATTTCTATATTTCTAGTATTAGGAATCATGACCCTCCATACCATTAATGGTATGATATTGTCCATTCTGAGTATAGGCTCTCATGGTTTTGCTTTTGGTTTCTCAAAAGGCTTCATATCACTTAGATGTATTCGTTACTTATAAACTCATATCGTCTCCTTAATATCACTGATATATTCGTTACTTATAAACTCATATCATCTCCTTAATTAGTCAACATGGGACTTCCTCCCAACAATTCTCAACATCTAATTCAACTCACATTTTCCTTCCTCGAGAAAGCATACTGTAATTGACTTAGAATTATTGGTGCTAGGTCGACATAAAGATTCCTCTCTTAATTTCACTAATCTTAGGAATCTCAAAGAAATGACTGAAAATTTCTTTATTCCAAGTTGTGAACTTCCCTGCTCTAATGGGCTTTGCCTTGCATTCACAGGTGTATATCATCAGGGCATACAATTTAGAAGACAAAGAAAACACCCATGGGGATTCTGATGTCACCCAATTGGAAAGAAATGGCAAAGGAAATACTGGATCAGGTAAAGGAGATCACGGCGAGGATTCAAACGTATCCCTCTTGGAAAAAAGTGGTAAAAAGGTTACTAGATCATCGGGGCGTAAAACCAGGGCTAATAAATCTGAAGATAAAGCAGCTAACGGCGAGGATTCTGGTGTCTCCCAGTTGGAAACAAGTGGCAAAAGAACTACAAGATCAGCAAGTAAAGGTATCATTGTTCATATAGACCTTCCTTCTATTATTGCTATTATCACAACAGTTTCTCTCTCACATGCTTTGAATTGGTAATGGATGTCTGAAAAGATACTGAATTTGAATTTATAATTAGCTTCCACTTTCCTTTCTCTGCCAGGGAAAAAGTAGCTCAAGATCTGCCTTCTTCTCCCCCACAAGGTTTATTATAAGTATCCCTATCCAAGGCTTTTTGACACAAAAGATTGAGAGCTTTTAGGATATTTTGTCAGGCTTATCTCTCTCTGGGCTGTTGTAATTGTATGTTGTAATATCAAGACATGTCAATGAAATGACCCCCTTCTATGATTTGAAGCTCCCTCCCACGAGCTGTGGTTGGCCGAGTTTATGGAGGGTAAAATATGGCACGATCAAACTTTCTTTTACCAGTTTGATAGAATAGTTCATGTAACGGCCCAAACCCACCGTTTGCAAATATTGTCTTCTTTGAACTTTTTCTACTGATTTTTTCATCAAAGAGGACAATATCTATTAGCCGTGGGTTTAAACCGTTACAGTTCAGGTGGTTAAAACATAGACTCTTAATCAAGAGATCAAAATTTGCATTATAACCAAACAAAAAAGGGTTGTTCTTTGACCTCTCTTATTCGTTCTTTATAGATGTCTAGAGTAAAATATGGTATGATCAATGTTTTAGCGGATTCTCTCTATGGATTGTATAGTTTAATTAGTTAACACATATACCCTTAACTAAG GCAATATACAGAGCCCAATTAATCCCAGGCCCAATCCACTTCATCATCTCCATTGTTCACTGGTATATAGCTGTGCTTGAGCCCAATAGTAGCTTGGTTTGAATTCAAATCAAATCCAGAGCTCTCTGTAGTGGCGCTCGAAATTCTCTCGAGAGAGCCCATCACCAGAAAAATCGAAGGGAACAAGCTTCAGTTCCGCGACAGAAATCTACAACGGTCAGATTCTTGCTTCACTTTCTTGCTCTTTTTGCTCTCTTTGCCGATTTGAGGGATTGGAGACGGATCTTCCGCTGCTGTTTGGTTTCCAGGAAAATGGTGGAATCGAACTTGACTTACGAGGAATGCCGACGCCAGAGGTTGGAGGAGAATAAGAAGAGGATGGAAGAGCTTAATCTCAACAAGCTAGCCGATGCTCTGAAATCTTCCAGCCCTAAATCCTCTCCGACGAAGCAGCTAAAGCGTCCTCGTCAGCCACTCGATATCTCGTCCTTAAGTGTGAGAAGATCCAGCCGTTTTGCGGATAAGCCCCCTCCAAGCTATAAGGAGGAGCCCATTGAACCACTTGCAGGTTTAAGAAGGACTTATCAAAGGAGGGATTTGTTGAATCGGGTTTATGCTTCAGATGTGGAAAGGCAATATGCCATTGACAGAGCACGAGACCTTCAATCTAGCCTAGAATCTAGATACCCAAGTTTTGTGAAGCCCATGCTTCAATCACATGTCACCGGGGGATTTTGGCTGGGTCTTCCAGTTCATTTTTGCAAGGCACACCTTCCCCTTGAGGATGAAATGTTAACTCTGGTGGACGAGGATGAAAATGAGTTCCAAACAAAATACCTTGCCGAAAAAACAGGTCTTAGTGGTGGTTGGAGAGGGTTTTCCATTGATCACCAGTTAGTAGATGGGGATACTTTGGTGTTTCAGTTAACTAAGCCGACTGAATTCAAGGTGTATATCATCAGGGCATACAATTTAGAAGACAAAGAAAACACCCATGGGGATTCTGATGTCACCCAATTGGAAAGAAATGGCAAAGGAAATACTGGATCAGGTAAAGGAGATCACGGCGAGGATTCAAACGTATCCCTCTTGGAAAAAAGTGGTAAAAAGGTTACTAGATCATCGGGGCGTAAAACCAGGGCTAATAAATCTGAAGATAAAGCAGCTAACGGCGAGGATTCTGGTGTCTCCCAGTTGGAAACAAGTGGCAAAAGAACTACAAGATCAGCAAGTAAAGGGAAAAAGTAGCTCAAGATCTGCCTTCTTCTCCCCCACAAGGTTTATTATAAGTATCCCTATCCAAGGCTTTTTGACACAAAAGATTGAGAGCTTTTAGGATATTTTGTCAGGCTTATCTCTCTCTGGGCTGTTGTAATTGTATGTTGTAATATCAAGACATGTCAATGAAATGACCCCCTTCTATGATTTGAAGCTCCCTCCCACGAGCTGTGGTTGGCCGAGTTTATGGAGGGTAAAATATGGCACGATCAAACTTTCTTTTACCAGTTTGATAGAATAGTTCATGTAACGGCCCAAACCCACCGTTTGCAAATATTGTCTTCTTTGAACTTTTTCTACTGATTTTTTCATCAAAGAGGACAATATCTATTAGCCGTGGGTTTAAACCGTTACAGTTCAGGTGGTTAAAACATAGACTCTTAATCAAGAGATCAAAATTTGCATTATAACCAAACAAAAAAGGGTTGTTCTTTGACCTCTCTTATTCGTTCTTTATAGATGTCTAGAGTAAAATATGGTATGATCAATGTTTTAGCGGATTCTCTCTATGGATTGTATAGTTTAATTAGTTAACACATATACCCTTAACTAAG ATGGTGGAATCGAACTTGACTTACGAGGAATGCCGACGCCAGAGGTTGGAGGAGAATAAGAAGAGGATGGAAGAGCTTAATCTCAACAAGCTAGCCGATGCTCTGAAATCTTCCAGCCCTAAATCCTCTCCGACGAAGCAGCTAAAGCGTCCTCGTCAGCCACTCGATATCTCGTCCTTAAGTGTGAGAAGATCCAGCCGTTTTGCGGATAAGCCCCCTCCAAGCTATAAGGAGGAGCCCATTGAACCACTTGCAGGTTTAAGAAGGACTTATCAAAGGAGGGATTTGTTGAATCGGGTTTATGCTTCAGATGTGGAAAGGCAATATGCCATTGACAGAGCACGAGACCTTCAATCTAGCCTAGAATCTAGATACCCAAGTTTTGTGAAGCCCATGCTTCAATCACATGTCACCGGGGGATTTTGGCTGGGTCTTCCAGTTCATTTTTGCAAGGCACACCTTCCCCTTGAGGATGAAATGTTAACTCTGGTGGACGAGGATGAAAATGAGTTCCAAACAAAATACCTTGCCGAAAAAACAGGTCTTAGTGGTGGTTGGAGAGGGTTTTCCATTGATCACCAGTTAGTAGATGGGGATACTTTGGTGTTTCAGTTAACTAAGCCGACTGAATTCAAGGTGTATATCATCAGGGCATACAATTTAGAAGACAAAGAAAACACCCATGGGGATTCTGATGTCACCCAATTGGAAAGAAATGGCAAAGGAAATACTGGATCAGGTAAAGGAGATCACGGCGAGGATTCAAACGTATCCCTCTTGGAAAAAAGTGGTAAAAAGGTTACTAGATCATCGGGGCGTAAAACCAGGGCTAATAAATCTGAAGATAAAGCAGCTAACGGCGAGGATTCTGGTGTCTCCCAGTTGGAAACAAGTGGCAAAAGAACTACAAGATCAGCAAGTAAAGGGAAAAAGTAG MVESNLTYEECRRQRLEENKKRMEELNLNKLADALKSSSPKSSPTKQLKRPRQPLDISSLSVRRSSRFADKPPPSYKEEPIEPLAGLRRTYQRRDLLNRVYASDVERQYAIDRARDLQSSLESRYPSFVKPMLQSHVTGGFWLGLPVHFCKAHLPLEDEMLTLVDEDENEFQTKYLAEKTGLSGGWRGFSIDHQLVDGDTLVFQLTKPTEFKVYIIRAYNLEDKENTHGDSDVTQLERNGKGNTGSGKGDHGEDSNVSLLEKSGKKVTRSSGRKTRANKSEDKAANGEDSGVSQLETSGKRTTRSASKGKK Homology
BLAST of Cp4.1LG15g04980 vs. ExPASy Swiss-Prot
Match: Q1G3M3 (B3 domain-containing protein At3g19184 OS=Arabidopsis thaliana OX=3702 GN=At3g19184 PE=2 SV=1) HSP 1 Score: 264.2 bits (674), Expect = 1.8e-69 Identity = 160/286 (55.94%), Postives = 191/286 (66.78%), Query Frame = 0
BLAST of Cp4.1LG15g04980 vs. ExPASy Swiss-Prot
Match: Q69V36 (B3 domain-containing protein Os06g0194400 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0194400 PE=2 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 2.7e-57 Identity = 121/217 (55.76%), Postives = 158/217 (72.81%), Query Frame = 0
BLAST of Cp4.1LG15g04980 vs. ExPASy Swiss-Prot
Match: Q9FMZ4 (B3 domain-containing protein At5g42700 OS=Arabidopsis thaliana OX=3702 GN=At5g42700 PE=2 SV=2) HSP 1 Score: 201.1 bits (510), Expect = 1.9e-50 Identity = 112/221 (50.68%), Postives = 138/221 (62.44%), Query Frame = 0
BLAST of Cp4.1LG15g04980 vs. ExPASy Swiss-Prot
Match: Q10QS9 (B3 domain-containing protein Os03g0184500 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0184500 PE=2 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 1.3e-43 Identity = 101/225 (44.89%), Postives = 134/225 (59.56%), Query Frame = 0
BLAST of Cp4.1LG15g04980 vs. ExPASy Swiss-Prot
Match: Q5KQI4 (B3 domain-containing protein Os05g0481400 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0481400 PE=2 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 5.5e-42 Identity = 99/233 (42.49%), Postives = 143/233 (61.37%), Query Frame = 0
BLAST of Cp4.1LG15g04980 vs. NCBI nr
Match: XP_023553873.1 (B3 domain-containing protein At3g19184-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 596 bits (1536), Expect = 2.42e-214 Identity = 311/311 (100.00%), Postives = 311/311 (100.00%), Query Frame = 0
BLAST of Cp4.1LG15g04980 vs. NCBI nr
Match: XP_023553874.1 (B3 domain-containing protein At3g19184-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 587 bits (1514), Expect = 5.06e-211 Identity = 309/311 (99.36%), Postives = 309/311 (99.36%), Query Frame = 0
BLAST of Cp4.1LG15g04980 vs. NCBI nr
Match: XP_023553875.1 (B3 domain-containing protein At3g19184-like isoform X3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 585 bits (1508), Expect = 4.01e-210 Identity = 308/311 (99.04%), Postives = 308/311 (99.04%), Query Frame = 0
BLAST of Cp4.1LG15g04980 vs. NCBI nr
Match: KAG7011660.1 (B3 domain-containing protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 581 bits (1497), Expect = 2.13e-208 Identity = 305/311 (98.07%), Postives = 307/311 (98.71%), Query Frame = 0
BLAST of Cp4.1LG15g04980 vs. NCBI nr
Match: XP_022952760.1 (B3 domain-containing protein At3g19184-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 576 bits (1484), Expect = 2.04e-206 Identity = 303/311 (97.43%), Postives = 304/311 (97.75%), Query Frame = 0
BLAST of Cp4.1LG15g04980 vs. ExPASy TrEMBL
Match: A0A6J1GMN4 (B3 domain-containing protein At3g19184-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455364 PE=4 SV=1) HSP 1 Score: 576 bits (1484), Expect = 9.86e-207 Identity = 303/311 (97.43%), Postives = 304/311 (97.75%), Query Frame = 0
BLAST of Cp4.1LG15g04980 vs. ExPASy TrEMBL
Match: A0A6J1IBU8 (B3 domain-containing protein At3g19184-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471078 PE=4 SV=1) HSP 1 Score: 569 bits (1467), Expect = 3.84e-204 Identity = 300/311 (96.46%), Postives = 302/311 (97.11%), Query Frame = 0
BLAST of Cp4.1LG15g04980 vs. ExPASy TrEMBL
Match: A0A6J1GLA0 (B3 domain-containing protein At3g19184-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455364 PE=4 SV=1) HSP 1 Score: 567 bits (1462), Expect = 2.06e-203 Identity = 301/311 (96.78%), Postives = 302/311 (97.11%), Query Frame = 0
BLAST of Cp4.1LG15g04980 vs. ExPASy TrEMBL
Match: A0A6J1GLH9 (B3 domain-containing protein At3g19184-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111455364 PE=4 SV=1) HSP 1 Score: 565 bits (1456), Expect = 1.63e-202 Identity = 300/311 (96.46%), Postives = 301/311 (96.78%), Query Frame = 0
BLAST of Cp4.1LG15g04980 vs. ExPASy TrEMBL
Match: A0A6J1I8X0 (B3 domain-containing protein At3g19184-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111471078 PE=4 SV=1) HSP 1 Score: 561 bits (1445), Expect = 8.04e-201 Identity = 298/311 (95.82%), Postives = 300/311 (96.46%), Query Frame = 0
BLAST of Cp4.1LG15g04980 vs. TAIR 10
Match: AT3G19184.1 (AP2/B3-like transcriptional factor family protein ) HSP 1 Score: 264.2 bits (674), Expect = 1.3e-70 Identity = 160/286 (55.94%), Postives = 191/286 (66.78%), Query Frame = 0
BLAST of Cp4.1LG15g04980 vs. TAIR 10
Match: AT5G42700.1 (AP2/B3-like transcriptional factor family protein ) HSP 1 Score: 201.1 bits (510), Expect = 1.3e-51 Identity = 112/221 (50.68%), Postives = 138/221 (62.44%), Query Frame = 0
BLAST of Cp4.1LG15g04980 vs. TAIR 10
Match: AT5G58280.1 (AP2/B3-like transcriptional factor family protein ) HSP 1 Score: 125.6 bits (314), Expect = 7.2e-29 Identity = 97/294 (32.99%), Postives = 150/294 (51.02%), Query Frame = 0
BLAST of Cp4.1LG15g04980 vs. TAIR 10
Match: AT4G33280.1 (AP2/B3-like transcriptional factor family protein ) HSP 1 Score: 53.9 bits (128), Expect = 2.7e-07 Identity = 44/152 (28.95%), Postives = 68/152 (44.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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