Cp4.1LG15g04460 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG15g04460
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	transcription factor bHLH113 isoform X2
Location	Cp4.1LG15: 5643517 .. 5645189 (+)
RNA-Seq Expression	Cp4.1LG15g04460
Synteny	Cp4.1LG15g04460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGTACATCCTATACCCACTAATTTTCTCCGTCTCGTACATAATCACATCGATCATTCACGGTAACCATCGAATCAAATCATCAAACAAAGGGACTCACATACACACACAATTAGATCATAAGTAGAAACAAAAGAACCAAATTAAAAAGAAACTCATGTTCTTCGAGCCTCATATCAAAAACAGAGCACCGTGGCAATGGCAATAACAATGGCTTCCTCTGCCTCCACTTCGGACATCGAAATCCACAGCCATCTCGGGTCCAAAACATTTGACCAAAACGCTCCAAAAACCAAAATCTCGGAACTTTCCAAGCCCTCCACACACTCCATTTCTAACCAAAACCACAATAATCCCCTGCTTCTCACTCGCACACAAACAGAGACAGAGACAGAGACAAAAGAAAAAACATAAAAAGCTTCCGTTTTTTTCTCCCACTGATGTTCTTCACACTTCTAAAAACACCAGCAGCTCGATTTCACACTGTTTTTATCTGGGGCTCTGTTTTCTTTCCAACCCATTAATGGCGGAAAATCAATCCTCTGGTCGGGACCCAAAAACAGCAGCAGCTACCACTTTTTCTCAGCTTCTATTCTTCGCAGATCATGATGAAGATGATGATATCGATGTTGATAAACATCATCATGTTCATCACCAAATCTTTGAGTACTCTGTTTCTTCATCATTCGCCATTGAAAACCCCCCCAAGATGCTCTGTTTCGGCACCAAACAAGAGCAAGAACATCCCCAGCTGGGACTTAGATCAGCCCACGCATGCAGCGATTCCGTAAAGAGAAAAAATGGTTCAAACCCAGAAACAACCGCCATTAAACCAGCTCCATTGTCGAACCAGAAAGCTTCAAAAAAGACCAAACCTGAAGCTCCCTGTTCTGCCGGACATGCAAAGGTCAGACAGTTCTTGCCATGTTCTTGTTTTTTTCTCTGTTTTTATGAAATGGGTTTTGTTTTTTTGGTGATATTAGAAGAAGGAGAAGCTAGGAGAAAGAATCACAGCGCTACAACAATTGGTTTCGCCGTTCGGCAAGGTTGCAGAAAAAAAAAAAAAACAGAGTATCTAATTTCATTACATTTTTGTCCATTTTCAAGAACTTGATATCAATTTTTGAATGTTGATGGCTTCAAAACAGACAGACACAGCTTCAGTTCTTCACGAGGCAATGGGTTACATCAAATTTTTACACGAACAAATTCAAGTCTTGTACAGTCCTTACCTGGACAAGAATCAGCTGGTAAGCACTCTGTTTAAAAAAAACAGAGCATTTTCCTGTTCTTCTTTGATTTTAAGCCATTTCTTCGCTTTGTTTCGCTGAAGGGAGGAGGAAATGGGGAAACGGAGGGGGAGCTGAAAGGGAGAGGGCTGTGTTTGATTCCGGTGGAGTGTAGCTTGCATTTGGCGAACTGTACGGTGGCGGACTTTTGGTCGCCGGCGATGGCCATGGGGAGGAAGCTCTGAGAAGGAAGGAGGGTTTTGTAGTTTGATGTGTATATAGTTTTGGTGTTTTTTTTGAGTTAAATGAATCAGAAACAGAGCAGAAGAAGCTGTAAATCGACAGTTCTTTTTTTGATGGGAAAGAAATAGATGTGAAAAGATGTTCTTTTTTTTTGTTCTTTTCCTGTTTTTTGGGGTTTGAGTTGTCGGACTTGTTTATTTTG

mRNA sequence

TGGTACATCCTATACCCACTAATTTTCTCCGTCTCGTACATAATCACATCGATCATTCACGGTAACCATCGAATCAAATCATCAAACAAAGGGACTCACATACACACACAATTAGATCATAAGTAGAAACAAAAGAACCAAATTAAAAAGAAACTCATGTTCTTCGAGCCTCATATCAAAAACAGAGCACCGTGGCAATGGCAATAACAATGGCTTCCTCTGCCTCCACTTCGGACATCGAAATCCACAGCCATCTCGGGTCCAAAACATTTGACCAAAACGCTCCAAAAACCAAAATCTCGGAACTTTCCAAGCCCTCCACACACTCCATTTCTAACCAAAACCACAATAATCCCCTGCTTCTCACTCGCACACAAACAGAGACAGAGACAGAGACAAAAGAAAAAACATAAAAAGCTTCCGTTTTTTTCTCCCACTGATGTTCTTCACACTTCTAAAAACACCAGCAGCTCGATTTCACACTGTTTTTATCTGGGGCTCTGTTTTCTTTCCAACCCATTAATGGCGGAAAATCAATCCTCTGGTCGGGACCCAAAAACAGCAGCAGCTACCACTTTTTCTCAGCTTCTATTCTTCGCAGATCATGATGAAGATGATGATATCGATGTTGATAAACATCATCATGTTCATCACCAAATCTTTGAGTACTCTGTTTCTTCATCATTCGCCATTGAAAACCCCCCCAAGATGCTCTGTTTCGGCACCAAACAAGAGCAAGAACATCCCCAGCTGGGACTTAGATCAGCCCACGCATGCAGCGATTCCGTAAAGAGAAAAAATGGTTCAAACCCAGAAACAACCGCCATTAAACCAGCTCCATTGTCGAACCAGAAAGCTTCAAAAAAGACCAAACCTGAAGCTCCCTGTTCTGCCGGACATGCAAAGAAGAAGGAGAAGCTAGGAGAAAGAATCACAGCGCTACAACAATTGGTTTCGCCGTTCGGCAAGACAGACACAGCTTCAGTTCTTCACGAGGCAATGGGTTACATCAAATTTTTACACGAACAAATTCAAGTCTTGTACAGTCCTTACCTGGACAAGAATCAGCTGGGAGGAGGAAATGGGGAAACGGAGGGGGAGCTGAAAGGGAGAGGGCTGTGTTTGATTCCGGTGGAGTGTAGCTTGCATTTGGCGAACTGTACGGTGGCGGACTTTTGGTCGCCGGCGATGGCCATGGGGAGGAAGCTCTGAGAAGGAAGGAGGGTTTTGTAGTTTGATGTGTATATAGTTTTGGTGTTTTTTTTGAGTTAAATGAATCAGAAACAGAGCAGAAGAAGCTGTAAATCGACAGTTCTTTTTTTGATGGGAAAGAAATAGATGTGAAAAGATGTTCTTTTTTTTTGTTCTTTTCCTGTTTTTTGGGGTTTGAGTTGTCGGACTTGTTTATTTTG

Coding sequence (CDS)

ATGGCGGAAAATCAATCCTCTGGTCGGGACCCAAAAACAGCAGCAGCTACCACTTTTTCTCAGCTTCTATTCTTCGCAGATCATGATGAAGATGATGATATCGATGTTGATAAACATCATCATGTTCATCACCAAATCTTTGAGTACTCTGTTTCTTCATCATTCGCCATTGAAAACCCCCCCAAGATGCTCTGTTTCGGCACCAAACAAGAGCAAGAACATCCCCAGCTGGGACTTAGATCAGCCCACGCATGCAGCGATTCCGTAAAGAGAAAAAATGGTTCAAACCCAGAAACAACCGCCATTAAACCAGCTCCATTGTCGAACCAGAAAGCTTCAAAAAAGACCAAACCTGAAGCTCCCTGTTCTGCCGGACATGCAAAGAAGAAGGAGAAGCTAGGAGAAAGAATCACAGCGCTACAACAATTGGTTTCGCCGTTCGGCAAGACAGACACAGCTTCAGTTCTTCACGAGGCAATGGGTTACATCAAATTTTTACACGAACAAATTCAAGTCTTGTACAGTCCTTACCTGGACAAGAATCAGCTGGGAGGAGGAAATGGGGAAACGGAGGGGGAGCTGAAAGGGAGAGGGCTGTGTTTGATTCCGGTGGAGTGTAGCTTGCATTTGGCGAACTGTACGGTGGCGGACTTTTGGTCGCCGGCGATGGCCATGGGGAGGAAGCTCTGA

Protein sequence

MAENQSSGRDPKTAAATTFSQLLFFADHDEDDDIDVDKHHHVHHQIFEYSVSSSFAIENPPKMLCFGTKQEQEHPQLGLRSAHACSDSVKRKNGSNPETTAIKPAPLSNQKASKKTKPEAPCSAGHAKKKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQIQVLYSPYLDKNQLGGGNGETEGELKGRGLCLIPVECSLHLANCTVADFWSPAMAMGRKL

Homology

[Close]

BLAST of Cp4.1LG15g04460 vs. ExPASy Swiss-Prot
Match: Q9LT67 (Transcription factor bHLH113 OS=Arabidopsis thaliana OX=3702 GN=BHLH113 PE=2 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 5.2e-29
Identity = 99/253 (39.13%), Postives = 128/253 (50.59%), Query Frame = 0


Query: 2   AENQSSGRDPKTAAATTFSQLLFFADHDEDDDIDVDKHHHVHHQIFEYSVSSSFAIENPP 61
           AE+Q      +    T+FS+LL F+D       D     +V     E S+   F+ +   
Sbjct: 5   AEDQDDRAMMEAEGVTSFSELLMFSDGVLSSSSDHQPEGNVGDG-GEDSLGFVFSGKTGS 64

Query: 62  KMLCFGTKQEQEHPQLGL----------------------RSAHACSDSVKRKNGSNPET 121
           +MLCF    + +   L L                       S  AC+     K+ +   T
Sbjct: 65  RMLCFSGGYQNDDESLFLEPSVPTSGVSDLDPSCIKIDCRNSNDACTVDKSTKSSTKKRT 124

Query: 122 -TAIKPAPLSNQKASKKTK-PEAPCSAGHAK-KKEKLGERITALQQLVSPFGKTDTASVL 181
            T        N+K  KK K  +   S G AK +KE+LGERI ALQQLVSP+GKTD ASVL
Sbjct: 125 GTGNGQESDQNRKPGKKGKRNQEKSSVGIAKVRKERLGERIAALQQLVSPYGKTDAASVL 184

Query: 182 HEAMGYIKFLHEQIQVLYSPYLDKNQLGGG--NGETEG-----ELKGRGLCLIPVECSLH 223
           HEAMGYIKFL +QIQVL SPYL  + L GG   G+        +L+ RGLCL+PV  ++H
Sbjct: 185 HEAMGYIKFLQDQIQVLCSPYLINHSLDGGVVTGDVMAAMKAKDLRSRGLCLVPVSSTVH 244

[Close]

BLAST of Cp4.1LG15g04460 vs. ExPASy Swiss-Prot
Match: Q94JL3 (Transcription factor bHLH112 OS=Arabidopsis thaliana OX=3702 GN=BHLH112 PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 9.4e-23
Identity = 61/125 (48.80%), Postives = 81/125 (64.80%), Query Frame = 0


Query: 109 NQKASKKTKPEAPCSAGHAK-KKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLH 168
           N+ A+KK +   P      K +KE L ++IT+LQQLVSPFGKTDTASVL EA+ YIKFLH
Sbjct: 261 NESAAKKPRVTTPSPLPTFKVRKENLRDQITSLQQLVSPFGKTDTASVLQEAIEYIKFLH 320

Query: 169 EQIQVLYSPYL-------DKNQLGG---GNGETEG-ELKGRGLCLIPVECSLHLANCTVA 222
           +Q+ VL +PY+        + Q+ G      E E  EL+G GLCL+P+  +  +AN T A
Sbjct: 321 DQVTVLSTPYMKQGASNQQQQQISGKSKSQDENENHELRGHGLCLVPISSTFPVANETTA 380

[Close]

BLAST of Cp4.1LG15g04460 vs. ExPASy Swiss-Prot
Match: Q8GXT3 (Transcription factor bHLH123 OS=Arabidopsis thaliana OX=3702 GN=BHLH123 PE=1 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.1e-22
Identity = 66/159 (41.51%), Postives = 92/159 (57.86%), Query Frame = 0


Query: 75  PQLGLRSAHACSDSVKRKNGS---NPETTAIKPAPLSNQKASKKTKPEAPCSAGHAKKKE 134
           P L     H  S   + KN S   +  +  +K     +Q A+K+ K EA   +   K+KE
Sbjct: 289 PALQPPQIHPQSFDEQPKNISEIRDSSSNEVKRGGNDHQPAAKRAKSEAASPSPAFKRKE 348

Query: 135 KLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQIQVLYSPYLD-----KNQLGGG 194
           K+G+RI ALQQLVSPFGKTD ASVL EA+ YIKFLH+Q+  L +PY+      ++Q    
Sbjct: 349 KMGDRIAALQQLVSPFGKTDAASVLSEAIEYIKFLHQQVSALSNPYMKSGASLQHQQSDH 408

Query: 195 NGE----TEGELKGRGLCLIPVECSLHLANCTVADFWSP 222
           + E     E +L+ RGLCL+PV  +  + + T  DFW+P
Sbjct: 409 STELEVSEEPDLRSRGLCLVPVSSTFPVTHDTTVDFWTP 447

[Close]

BLAST of Cp4.1LG15g04460 vs. ExPASy Swiss-Prot
Match: Q7XJU2 (Transcription factor bHLH153 OS=Arabidopsis thaliana OX=3702 GN=BHLH153 PE=1 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 5.2e-21
Identity = 49/94 (52.13%), Postives = 69/94 (73.40%), Query Frame = 0


Query: 128 KKKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQIQVLYSPYLDKNQLGGGN 187
           ++K+K+GERI+ALQQ+VSP+GKTDTASVL +AM YI+FLHEQ++VL +PYL         
Sbjct: 38  ERKDKVGERISALQQIVSPYGKTDTASVLLDAMHYIEFLHEQVKVLSAPYLQTVPDATQE 97

Query: 188 GETEGELKGRGLCLIPVECSLHLANCTVADFWSP 222
              +  L+ RGLCL+P+E ++ +A    AD W+P
Sbjct: 98  ELEQYSLRNRGLCLVPMENTVGVAQSNGADIWAP 131

[Close]

BLAST of Cp4.1LG15g04460 vs. ExPASy Swiss-Prot
Match: Q7XHI5 (Transcription factor bHLH133 OS=Arabidopsis thaliana OX=3702 GN=BHLH133 PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.5e-20
Identity = 61/154 (39.61%), Postives = 77/154 (50.00%), Query Frame = 0


Query: 112 ASKKTKPEAPCSAGHAK-KKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQI 171
           A+KK K + P S    K +KEKLG RI +L QLVSPFGKTDTASVL EA+GYI+FLH QI
Sbjct: 203 ANKKPKLQVPSSQSTLKVRKEKLGGRIASLHQLVSPFGKTDTASVLSEAIGYIRFLHSQI 262

Query: 172 QVLYSPYL------------------------------------------DKNQLGGGNG 223
           + L  PY                                             NQ    N 
Sbjct: 263 EALSLPYFGTPSRNNMMHQHAQRNMNGIFPEDPGQLVNEYCMKRGVSLSSTDNQKSNPNE 322

[Close]

BLAST of Cp4.1LG15g04460 vs. NCBI nr
Match: XP_023553845.1 (transcription factor bHLH113 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 467 bits (1202), Expect = 3.53e-166
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MAENQSSGRDPKTAAATTFSQLLFFADHDEDDDIDVDKHHHVHHQIFEYSVSSSFAIENP 60
           MAENQSSGRDPKTAAATTFSQLLFFADHDEDDDIDVDKHHHVHHQIFEYSVSSSFAIENP
Sbjct: 1   MAENQSSGRDPKTAAATTFSQLLFFADHDEDDDIDVDKHHHVHHQIFEYSVSSSFAIENP 60

Query: 61  PKMLCFGTKQEQEHPQLGLRSAHACSDSVKRKNGSNPETTAIKPAPLSNQKASKKTKPEA 120
           PKMLCFGTKQEQEHPQLGLRSAHACSDSVKRKNGSNPETTAIKPAPLSNQKASKKTKPEA
Sbjct: 61  PKMLCFGTKQEQEHPQLGLRSAHACSDSVKRKNGSNPETTAIKPAPLSNQKASKKTKPEA 120

Query: 121 PCSAGHAKKKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQIQVLYSPYLDK 180
           PCSAGHAKKKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQIQVLYSPYLDK
Sbjct: 121 PCSAGHAKKKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQIQVLYSPYLDK 180

Query: 181 NQLGGGNGETEGELKGRGLCLIPVECSLHLANCTVADFWSPAMAMGRKL 229
           NQLGGGNGETEGELKGRGLCLIPVECSLHLANCTVADFWSPAMAMGRKL
Sbjct: 181 NQLGGGNGETEGELKGRGLCLIPVECSLHLANCTVADFWSPAMAMGRKL 229

[Close]

BLAST of Cp4.1LG15g04460 vs. NCBI nr
Match: KAG6571939.1 (Transcription factor basic helix-loop-helix 113, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011627.1 Transcription factor bHLH, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 462 bits (1188), Expect = 4.81e-164
Identity = 226/229 (98.69%), Postives = 228/229 (99.56%), Query Frame = 0


Query: 1   MAENQSSGRDPKTAAATTFSQLLFFADHDEDDDIDVDKHHHVHHQIFEYSVSSSFAIENP 60
           MAENQSSGRDPKTAAATTFSQLLF ADHDEDDDIDVDKHHHVHHQIFEYSVSSSFAIENP
Sbjct: 1   MAENQSSGRDPKTAAATTFSQLLFSADHDEDDDIDVDKHHHVHHQIFEYSVSSSFAIENP 60

Query: 61  PKMLCFGTKQEQEHPQLGLRSAHACSDSVKRKNGSNPETTAIKPAPLSNQKASKKTKPEA 120
           PKMLCFGTKQEQEHPQLGLRSAHACSDSVKRKNGSNPETTAIKPAPLSNQKASKKTKPEA
Sbjct: 61  PKMLCFGTKQEQEHPQLGLRSAHACSDSVKRKNGSNPETTAIKPAPLSNQKASKKTKPEA 120

Query: 121 PCSAGHAKKKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQIQVLYSPYLDK 180
           PCSAGHAK+KEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQIQVLYSPYLDK
Sbjct: 121 PCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQIQVLYSPYLDK 180

Query: 181 NQLGGGNGETEGELKGRGLCLIPVECSLHLANCTVADFWSPAMAMGRKL 229
           NQLGGGNG+TEGELKGRGLCLIPVECSLHLANCTVADFWSPAMAMGRKL
Sbjct: 181 NQLGGGNGDTEGELKGRGLCLIPVECSLHLANCTVADFWSPAMAMGRKL 229

[Close]

BLAST of Cp4.1LG15g04460 vs. NCBI nr
Match: XP_022952658.1 (transcription factor bHLH113 isoform X2 [Cucurbita moschata])

HSP 1 Score: 460 bits (1183), Expect = 2.78e-163
Identity = 225/229 (98.25%), Postives = 228/229 (99.56%), Query Frame = 0


Query: 1   MAENQSSGRDPKTAAATTFSQLLFFADHDEDDDIDVDKHHHVHHQIFEYSVSSSFAIENP 60
           MAENQSSGRDPKTAAATTFSQLLF A+HDEDDDIDVDKHHHVHHQIFEYSVSSSFAIENP
Sbjct: 1   MAENQSSGRDPKTAAATTFSQLLFSANHDEDDDIDVDKHHHVHHQIFEYSVSSSFAIENP 60

Query: 61  PKMLCFGTKQEQEHPQLGLRSAHACSDSVKRKNGSNPETTAIKPAPLSNQKASKKTKPEA 120
           PKMLCFGTKQEQEHPQLGLRSAHACSDSVKRKNGSNPETTAIKPAPLSNQKASKKTKPEA
Sbjct: 61  PKMLCFGTKQEQEHPQLGLRSAHACSDSVKRKNGSNPETTAIKPAPLSNQKASKKTKPEA 120

Query: 121 PCSAGHAKKKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQIQVLYSPYLDK 180
           PCSAGHAK+KEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQIQVLYSPYLDK
Sbjct: 121 PCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQIQVLYSPYLDK 180

Query: 181 NQLGGGNGETEGELKGRGLCLIPVECSLHLANCTVADFWSPAMAMGRKL 229
           NQLGGGNG+TEGELKGRGLCLIPVECSLHLANCTVADFWSPAMAMGRKL
Sbjct: 181 NQLGGGNGDTEGELKGRGLCLIPVECSLHLANCTVADFWSPAMAMGRKL 229

[Close]

BLAST of Cp4.1LG15g04460 vs. NCBI nr
Match: XP_022972439.1 (transcription factor bHLH113 isoform X1 [Cucurbita maxima])

HSP 1 Score: 454 bits (1168), Expect = 2.93e-159
Identity = 223/229 (97.38%), Postives = 226/229 (98.69%), Query Frame = 0


Query: 1   MAENQSSGRDPKTAAATTFSQLLFFADHDEDDDIDVDKHHHVHHQIFEYSVSSSFAIENP 60
           MAENQSSGRDPKTAAATTFSQLLF ADHDE D+IDVDKHHHVHHQIFEYSVSSSFAIENP
Sbjct: 112 MAENQSSGRDPKTAAATTFSQLLFSADHDEYDEIDVDKHHHVHHQIFEYSVSSSFAIENP 171

Query: 61  PKMLCFGTKQEQEHPQLGLRSAHACSDSVKRKNGSNPETTAIKPAPLSNQKASKKTKPEA 120
           PKMLCFGTKQEQEHPQLGLRSAHACSDSVKRKNGSNPETTAIKPAPLSNQKASKKTKPEA
Sbjct: 172 PKMLCFGTKQEQEHPQLGLRSAHACSDSVKRKNGSNPETTAIKPAPLSNQKASKKTKPEA 231

Query: 121 PCSAGHAKKKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQIQVLYSPYLDK 180
           PCSAGHAK+KEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQIQVLYSPYLDK
Sbjct: 232 PCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQIQVLYSPYLDK 291

Query: 181 NQLGGGNGETEGELKGRGLCLIPVECSLHLANCTVADFWSPAMAMGRKL 229
           NQLG GNGETEGE+KGRGLCLIPVECSLHLANCTVADFWSPAMAMGRKL
Sbjct: 292 NQLGRGNGETEGEMKGRGLCLIPVECSLHLANCTVADFWSPAMAMGRKL 340

[Close]

BLAST of Cp4.1LG15g04460 vs. NCBI nr
Match: XP_022952657.1 (transcription factor bHLH113 isoform X1 [Cucurbita moschata])

HSP 1 Score: 444 bits (1143), Expect = 9.98e-157
Identity = 225/258 (87.21%), Postives = 228/258 (88.37%), Query Frame = 0


Query: 1   MAENQSSGRDPKTAAATTFSQLLFFADHDEDDDIDVDKHHHVHHQIFEYSVSSSFAIENP 60
           MAENQSSGRDPKTAAATTFSQLLF A+HDEDDDIDVDKHHHVHHQIFEYSVSSSFAIENP
Sbjct: 1   MAENQSSGRDPKTAAATTFSQLLFSANHDEDDDIDVDKHHHVHHQIFEYSVSSSFAIENP 60

Query: 61  PKMLCFGTKQEQEHPQLGLRSAHACSDSVKRKNGSNPETTAIKPAPLSNQKASKKTKPEA 120
           PKMLCFGTKQEQEHPQLGLRSAHACSDSVKRKNGSNPETTAIKPAPLSNQKASKKTKPEA
Sbjct: 61  PKMLCFGTKQEQEHPQLGLRSAHACSDSVKRKNGSNPETTAIKPAPLSNQKASKKTKPEA 120

Query: 121 PCSAGHAKKKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQIQVLYSPYLDK 180
           PCSAGHAK+KEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQIQVLYSPYLDK
Sbjct: 121 PCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQIQVLYSPYLDK 180

Query: 181 NQL-----------------------------GGGNGETEGELKGRGLCLIPVECSLHLA 229
           NQL                             GGGNG+TEGELKGRGLCLIPVECSLHLA
Sbjct: 181 NQLVSTLFQKKKQSIFLFFFDFKPFLRFVSLKGGGNGDTEGELKGRGLCLIPVECSLHLA 240

[Close]

BLAST of Cp4.1LG15g04460 vs. ExPASy TrEMBL
Match: A0A6J1GL82 (transcription factor bHLH113 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455286 PE=4 SV=1)

HSP 1 Score: 460 bits (1183), Expect = 1.35e-163
Identity = 225/229 (98.25%), Postives = 228/229 (99.56%), Query Frame = 0


Query: 1   MAENQSSGRDPKTAAATTFSQLLFFADHDEDDDIDVDKHHHVHHQIFEYSVSSSFAIENP 60
           MAENQSSGRDPKTAAATTFSQLLF A+HDEDDDIDVDKHHHVHHQIFEYSVSSSFAIENP
Sbjct: 1   MAENQSSGRDPKTAAATTFSQLLFSANHDEDDDIDVDKHHHVHHQIFEYSVSSSFAIENP 60

Query: 61  PKMLCFGTKQEQEHPQLGLRSAHACSDSVKRKNGSNPETTAIKPAPLSNQKASKKTKPEA 120
           PKMLCFGTKQEQEHPQLGLRSAHACSDSVKRKNGSNPETTAIKPAPLSNQKASKKTKPEA
Sbjct: 61  PKMLCFGTKQEQEHPQLGLRSAHACSDSVKRKNGSNPETTAIKPAPLSNQKASKKTKPEA 120

Query: 121 PCSAGHAKKKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQIQVLYSPYLDK 180
           PCSAGHAK+KEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQIQVLYSPYLDK
Sbjct: 121 PCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQIQVLYSPYLDK 180

Query: 181 NQLGGGNGETEGELKGRGLCLIPVECSLHLANCTVADFWSPAMAMGRKL 229
           NQLGGGNG+TEGELKGRGLCLIPVECSLHLANCTVADFWSPAMAMGRKL
Sbjct: 181 NQLGGGNGDTEGELKGRGLCLIPVECSLHLANCTVADFWSPAMAMGRKL 229

[Close]

BLAST of Cp4.1LG15g04460 vs. ExPASy TrEMBL
Match: A0A6J1IBJ7 (transcription factor bHLH113 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470999 PE=4 SV=1)

HSP 1 Score: 454 bits (1168), Expect = 1.42e-159
Identity = 223/229 (97.38%), Postives = 226/229 (98.69%), Query Frame = 0


Query: 1   MAENQSSGRDPKTAAATTFSQLLFFADHDEDDDIDVDKHHHVHHQIFEYSVSSSFAIENP 60
           MAENQSSGRDPKTAAATTFSQLLF ADHDE D+IDVDKHHHVHHQIFEYSVSSSFAIENP
Sbjct: 112 MAENQSSGRDPKTAAATTFSQLLFSADHDEYDEIDVDKHHHVHHQIFEYSVSSSFAIENP 171

Query: 61  PKMLCFGTKQEQEHPQLGLRSAHACSDSVKRKNGSNPETTAIKPAPLSNQKASKKTKPEA 120
           PKMLCFGTKQEQEHPQLGLRSAHACSDSVKRKNGSNPETTAIKPAPLSNQKASKKTKPEA
Sbjct: 172 PKMLCFGTKQEQEHPQLGLRSAHACSDSVKRKNGSNPETTAIKPAPLSNQKASKKTKPEA 231

Query: 121 PCSAGHAKKKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQIQVLYSPYLDK 180
           PCSAGHAK+KEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQIQVLYSPYLDK
Sbjct: 232 PCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQIQVLYSPYLDK 291

Query: 181 NQLGGGNGETEGELKGRGLCLIPVECSLHLANCTVADFWSPAMAMGRKL 229
           NQLG GNGETEGE+KGRGLCLIPVECSLHLANCTVADFWSPAMAMGRKL
Sbjct: 292 NQLGRGNGETEGEMKGRGLCLIPVECSLHLANCTVADFWSPAMAMGRKL 340

[Close]

BLAST of Cp4.1LG15g04460 vs. ExPASy TrEMBL
Match: A0A6J1GKZ3 (transcription factor bHLH113 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455286 PE=4 SV=1)

HSP 1 Score: 444 bits (1143), Expect = 4.83e-157
Identity = 225/258 (87.21%), Postives = 228/258 (88.37%), Query Frame = 0


Query: 1   MAENQSSGRDPKTAAATTFSQLLFFADHDEDDDIDVDKHHHVHHQIFEYSVSSSFAIENP 60
           MAENQSSGRDPKTAAATTFSQLLF A+HDEDDDIDVDKHHHVHHQIFEYSVSSSFAIENP
Sbjct: 1   MAENQSSGRDPKTAAATTFSQLLFSANHDEDDDIDVDKHHHVHHQIFEYSVSSSFAIENP 60

Query: 61  PKMLCFGTKQEQEHPQLGLRSAHACSDSVKRKNGSNPETTAIKPAPLSNQKASKKTKPEA 120
           PKMLCFGTKQEQEHPQLGLRSAHACSDSVKRKNGSNPETTAIKPAPLSNQKASKKTKPEA
Sbjct: 61  PKMLCFGTKQEQEHPQLGLRSAHACSDSVKRKNGSNPETTAIKPAPLSNQKASKKTKPEA 120

Query: 121 PCSAGHAKKKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQIQVLYSPYLDK 180
           PCSAGHAK+KEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQIQVLYSPYLDK
Sbjct: 121 PCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQIQVLYSPYLDK 180

Query: 181 NQL-----------------------------GGGNGETEGELKGRGLCLIPVECSLHLA 229
           NQL                             GGGNG+TEGELKGRGLCLIPVECSLHLA
Sbjct: 181 NQLVSTLFQKKKQSIFLFFFDFKPFLRFVSLKGGGNGDTEGELKGRGLCLIPVECSLHLA 240

[Close]

BLAST of Cp4.1LG15g04460 vs. ExPASy TrEMBL
Match: A0A6J1I8M4 (transcription factor bHLH113 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470999 PE=4 SV=1)

HSP 1 Score: 446 bits (1148), Expect = 2.17e-156
Identity = 223/238 (93.70%), Postives = 226/238 (94.96%), Query Frame = 0


Query: 1   MAENQSSGRDPKTAAATTFSQLLFFADHDEDDDIDVDKHHHVHHQIFEYSVSSSFAIENP 60
           MAENQSSGRDPKTAAATTFSQLLF ADHDE D+IDVDKHHHVHHQIFEYSVSSSFAIENP
Sbjct: 112 MAENQSSGRDPKTAAATTFSQLLFSADHDEYDEIDVDKHHHVHHQIFEYSVSSSFAIENP 171

Query: 61  PKMLCFGTKQEQEHPQLGLRSAHACSDSVKRKNGSNPETTAIKPAPLSNQKASKKTKPEA 120
           PKMLCFGTKQEQEHPQLGLRSAHACSDSVKRKNGSNPETTAIKPAPLSNQKASKKTKPEA
Sbjct: 172 PKMLCFGTKQEQEHPQLGLRSAHACSDSVKRKNGSNPETTAIKPAPLSNQKASKKTKPEA 231

Query: 121 PCSAGHAKKKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQIQVLYSPYLDK 180
           PCSAGHAK+KEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQIQVLYSPYLDK
Sbjct: 232 PCSAGHAKRKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQIQVLYSPYLDK 291

Query: 181 NQL---------GGGNGETEGELKGRGLCLIPVECSLHLANCTVADFWSPAMAMGRKL 229
           NQL         G GNGETEGE+KGRGLCLIPVECSLHLANCTVADFWSPAMAMGRKL
Sbjct: 292 NQLVSTLFQKTEGRGNGETEGEMKGRGLCLIPVECSLHLANCTVADFWSPAMAMGRKL 349

[Close]

BLAST of Cp4.1LG15g04460 vs. ExPASy TrEMBL
Match: A0A1S3BZZ3 (transcription factor bHLH113 OS=Cucumis melo OX=3656 GN=LOC103495283 PE=4 SV=1)

HSP 1 Score: 330 bits (846), Expect = 6.46e-112
Identity = 185/260 (71.15%), Postives = 202/260 (77.69%), Query Frame = 0


Query: 1   MAENQS-SGRDPKTAAATTFSQLLFFADHDEDDD--IDVDKHHHVHHQIFEYSVSSS--- 60
           MAENQS +G   +   ATTFSQLLF   HD+DDD  +DVDK+HH   QIF+YSVSSS   
Sbjct: 1   MAENQSFAGDHLRPTTATTFSQLLFSPHHDDDDDNDVDVDKNHH---QIFDYSVSSSSSS 60

Query: 61  FAIENPPKMLCFGTKQE-QEHPQLGL----RSAHACSDS--------------VKRKNGS 120
           FAI+NPPKMLCFGTK+E QEHPQLG     RSAHACSDS              +KR+NGS
Sbjct: 61  FAIDNPPKMLCFGTKEEDQEHPQLGFKSRQRSAHACSDSSSNSSGNGLKFEFKLKRRNGS 120

Query: 121 NPETTAIKPAPLSNQKASKKTKPEAPCSAGHAKKKEKLGERITALQQLVSPFGKTDTASV 180
           NPET AIK       +ASKKTKPEAPCSAGHAK+KEKLGERITALQQLVSPFGKTDTASV
Sbjct: 121 NPETAAIK-------EASKKTKPEAPCSAGHAKRKEKLGERITALQQLVSPFGKTDTASV 180

Query: 181 LHEAMGYIKFLHEQIQVLYSPYLDKNQL-------GGGNGETEGELKGRGLCLIPVECSL 228
           LHEAMGYIKFLHEQ+QVL SPYL K+QL       G  NGETEG+LK RGLCLIPV+CSL
Sbjct: 181 LHEAMGYIKFLHEQVQVLCSPYLQKSQLLSSQSATGKENGETEGDLKSRGLCLIPVDCSL 240

[Close]

BLAST of Cp4.1LG15g04460 vs. TAIR 10
Match: AT3G19500.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 129.4 bits (324), Expect = 3.7e-30
Identity = 99/253 (39.13%), Postives = 128/253 (50.59%), Query Frame = 0


Query: 2   AENQSSGRDPKTAAATTFSQLLFFADHDEDDDIDVDKHHHVHHQIFEYSVSSSFAIENPP 61
           AE+Q      +    T+FS+LL F+D       D     +V     E S+   F+ +   
Sbjct: 5   AEDQDDRAMMEAEGVTSFSELLMFSDGVLSSSSDHQPEGNVGDG-GEDSLGFVFSGKTGS 64

Query: 62  KMLCFGTKQEQEHPQLGL----------------------RSAHACSDSVKRKNGSNPET 121
           +MLCF    + +   L L                       S  AC+     K+ +   T
Sbjct: 65  RMLCFSGGYQNDDESLFLEPSVPTSGVSDLDPSCIKIDCRNSNDACTVDKSTKSSTKKRT 124

Query: 122 -TAIKPAPLSNQKASKKTK-PEAPCSAGHAK-KKEKLGERITALQQLVSPFGKTDTASVL 181
            T        N+K  KK K  +   S G AK +KE+LGERI ALQQLVSP+GKTD ASVL
Sbjct: 125 GTGNGQESDQNRKPGKKGKRNQEKSSVGIAKVRKERLGERIAALQQLVSPYGKTDAASVL 184

Query: 182 HEAMGYIKFLHEQIQVLYSPYLDKNQLGGG--NGETEG-----ELKGRGLCLIPVECSLH 223
           HEAMGYIKFL +QIQVL SPYL  + L GG   G+        +L+ RGLCL+PV  ++H
Sbjct: 185 HEAMGYIKFLQDQIQVLCSPYLINHSLDGGVVTGDVMAAMKAKDLRSRGLCLVPVSSTVH 244

[Close]

BLAST of Cp4.1LG15g04460 vs. TAIR 10
Match: AT1G49830.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 117.5 bits (293), Expect = 1.4e-26
Identity = 78/198 (39.39%), Postives = 110/198 (55.56%), Query Frame = 0


Query: 45  QIFEYSVSSSFAIENPPKMLCFGTKQEQEHPQLGLRSAHACSDSVKRKNG---------- 104
           ++ E S    F   + P+MLCFG   + +   L  + + + +  +  +N           
Sbjct: 29  EVEEDSFGFRFTGNDAPQMLCFGGGNQNDTDLLFSQPSFSPASPLSSRNNACVVNDQSFR 88

Query: 105 SNPET-TAIKPAPLSNQKASKKTK-PEAPCSAGHAK-KKEKLGERITALQQLVSPFGKTD 164
           SN +T +A     + + K  K+ K  +   S G+AK KKEK+GE+IT LQ LVSP+GKTD
Sbjct: 89  SNKKTGSADGHDRVCDPKPGKRCKRDQKKSSLGNAKVKKEKVGEKITTLQHLVSPYGKTD 148

Query: 165 TASVLHEAMGYIKFLHEQIQVLYSPYLDKNQLGG-GNGETE-----GELKGRGLCLIPVE 224
            ASVLHE MGYIKFL +Q+QVL +PY   N L     GE        EL+  GLCL+P+ 
Sbjct: 149 AASVLHETMGYIKFLQDQVQVLSTPYFKHNPLDDEDTGEVNPTMKVKELRSNGLCLVPLA 208

[Close]

BLAST of Cp4.1LG15g04460 vs. TAIR 10
Match: AT1G61660.3 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 109.4 bits (272), Expect = 3.9e-24
Identity = 75/194 (38.66%), Postives = 107/194 (55.15%), Query Frame = 0


Query: 43  HHQIFEYSVSSSF---AIENPPKMLCFGTKQEQEHPQLGLRSAHACSDSVKRKNGSNPET 102
           HHQ+  Y + +SF   A   P       T      P   + +    S  ++ K  +  ++
Sbjct: 191 HHQV-AYGLINSFSNNANSRPFWNSSSTTNLNNTTPSNFVTTPQIISTRLEDKTKTRAQS 250

Query: 103 TAIKPAPLSNQKASKKTKPEAPCSAGHAK-KKEKLGERITALQQLVSPFGKTDTASVLHE 162
            ++K A   N+ A+KK +   P      K +KE L ++IT+LQQLVSPFGKTDTASVL E
Sbjct: 251 ESLKRAK-DNESAAKKPRVTTPSPLPTFKVRKENLRDQITSLQQLVSPFGKTDTASVLQE 310

Query: 163 AMGYIKFLHEQIQVLYSPYL-------DKNQLGG---GNGETEG-ELKGRGLCLIPVECS 222
           A+ YIKFLH+Q+ VL +PY+        + Q+ G      E E  EL+G GLCL+P+  +
Sbjct: 311 AIEYIKFLHDQVTVLSTPYMKQGASNQQQQQISGKSKSQDENENHELRGHGLCLVPISST 370

[Close]

BLAST of Cp4.1LG15g04460 vs. TAIR 10
Match: AT1G61660.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 108.6 bits (270), Expect = 6.7e-24
Identity = 61/125 (48.80%), Postives = 81/125 (64.80%), Query Frame = 0


Query: 109 NQKASKKTKPEAPCSAGHAK-KKEKLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLH 168
           N+ A+KK +   P      K +KE L ++IT+LQQLVSPFGKTDTASVL EA+ YIKFLH
Sbjct: 261 NESAAKKPRVTTPSPLPTFKVRKENLRDQITSLQQLVSPFGKTDTASVLQEAIEYIKFLH 320

Query: 169 EQIQVLYSPYL-------DKNQLGG---GNGETEG-ELKGRGLCLIPVECSLHLANCTVA 222
           +Q+ VL +PY+        + Q+ G      E E  EL+G GLCL+P+  +  +AN T A
Sbjct: 321 DQVTVLSTPYMKQGASNQQQQQISGKSKSQDENENHELRGHGLCLVPISSTFPVANETTA 380

[Close]

BLAST of Cp4.1LG15g04460 vs. TAIR 10
Match: AT3G20640.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 107.5 bits (267), Expect = 1.5e-23
Identity = 66/159 (41.51%), Postives = 92/159 (57.86%), Query Frame = 0


Query: 75  PQLGLRSAHACSDSVKRKNGS---NPETTAIKPAPLSNQKASKKTKPEAPCSAGHAKKKE 134
           P L     H  S   + KN S   +  +  +K     +Q A+K+ K EA   +   K+KE
Sbjct: 289 PALQPPQIHPQSFDEQPKNISEIRDSSSNEVKRGGNDHQPAAKRAKSEAASPSPAFKRKE 348

Query: 135 KLGERITALQQLVSPFGKTDTASVLHEAMGYIKFLHEQIQVLYSPYLD-----KNQLGGG 194
           K+G+RI ALQQLVSPFGKTD ASVL EA+ YIKFLH+Q+  L +PY+      ++Q    
Sbjct: 349 KMGDRIAALQQLVSPFGKTDAASVLSEAIEYIKFLHQQVSALSNPYMKSGASLQHQQSDH 408

Query: 195 NGE----TEGELKGRGLCLIPVECSLHLANCTVADFWSP 222
           + E     E +L+ RGLCL+PV  +  + + T  DFW+P
Sbjct: 409 STELEVSEEPDLRSRGLCLVPVSSTFPVTHDTTVDFWTP 447

The following BLAST results are available for this feature:

BLAST of Cp4.1LG15g04460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LT67	5.2e-29	39.13	Transcription factor bHLH113 OS=Arabidopsis thaliana OX=3702 GN=BHLH113 PE=2 SV=...	[more]
Q94JL3	9.4e-23	48.80	Transcription factor bHLH112 OS=Arabidopsis thaliana OX=3702 GN=BHLH112 PE=1 SV=...	[more]
Q8GXT3	2.1e-22	41.51	Transcription factor bHLH123 OS=Arabidopsis thaliana OX=3702 GN=BHLH123 PE=1 SV=...	[more]
Q7XJU2	5.2e-21	52.13	Transcription factor bHLH153 OS=Arabidopsis thaliana OX=3702 GN=BHLH153 PE=1 SV=...	[more]
Q7XHI5	1.5e-20	39.61	Transcription factor bHLH133 OS=Arabidopsis thaliana OX=3702 GN=BHLH133 PE=1 SV=...	[more]

BLAST of Cp4.1LG15g04460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023553845.1	3.53e-166	100.00	transcription factor bHLH113 [Cucurbita pepo subsp. pepo]	[more]
KAG6571939.1	4.81e-164	98.69	Transcription factor basic helix-loop-helix 113, partial [Cucurbita argyrosperma...	[more]
XP_022952658.1	2.78e-163	98.25	transcription factor bHLH113 isoform X2 [Cucurbita moschata]	[more]
XP_022972439.1	2.93e-159	97.38	transcription factor bHLH113 isoform X1 [Cucurbita maxima]	[more]
XP_022952657.1	9.98e-157	87.21	transcription factor bHLH113 isoform X1 [Cucurbita moschata]	[more]

BLAST of Cp4.1LG15g04460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GL82	1.35e-163	98.25	transcription factor bHLH113 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1IBJ7	1.42e-159	97.38	transcription factor bHLH113 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470...	[more]
A0A6J1GKZ3	4.83e-157	87.21	transcription factor bHLH113 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1I8M4	2.17e-156	93.70	transcription factor bHLH113 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470...	[more]
A0A1S3BZZ3	6.46e-112	71.15	transcription factor bHLH113 OS=Cucumis melo OX=3656 GN=LOC103495283 PE=4 SV=1	[more]

BLAST of Cp4.1LG15g04460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G19500.1	3.7e-30	39.13	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G49830.1	1.4e-26	39.39	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G61660.3	3.9e-24	38.66	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G61660.1	6.7e-24	48.80	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G20640.1	1.5e-23	41.51	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 127..182 e-value: 4.2E-5 score: 25.6
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 129..178
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..128
None	No IPR available	PANTHER	PTHR16223:SF238	TRANSCRIPTION FACTOR BHLH114	coord: 74..213
None	No IPR available	PANTHER	PTHR16223	TRANSCRIPTION FACTOR BHLH83-RELATED	coord: 74..213
None	No IPR available	CDD	cd11393	bHLH_AtbHLH_like	coord: 128..173 e-value: 2.3603E-21 score: 81.8439
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 117..166 score: 10.13088

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG15g04460.1	Cp4.1LG15g04460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding