Cp4.1LG15g04340 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG15g04340
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	cysteine-rich and transmembrane domain-containing protein WIH2-like
Location	Cp4.1LG15: 5465591 .. 5467966 (+)
RNA-Seq Expression	Cp4.1LG15g04340
Synteny	Cp4.1LG15g04340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTGTCTTTAACTGTAATATTTTGTTATAGTTTCTCAAATAATAATAATTATTATTATTAAATCAGATATTTACATTAAACAAATATATAAAATAACTGAAATAAAGTGGAAACTTCTTGTAAATTAATTTAACATTAAAAAATTTGGAAGCAGCATTGTTTTCTAAAAGGACGATGGACGATGGACTTTGGACATGAGGCAGTGTGACAGTAAGGACGCTAGACTCTAAGTGGAGTGGATTAGGAAGTCCTATATCGATTGGAGAAAGGAACGAGTGCCAGCTAGTACATGCATTCTAAAATCTGGAGGAGAAGTTCGAAAGGGAAAGCGAAGACAATATTTGCTAGCAATGGGCTTGGAGCGTTACAAATGATATTAGAGTCAGACACTTGGCTATGTGCCAGTGAGGAGGTTGAGCCCCGAAAGGGGTGAACATGAGGCAGTGTGTCCGCAAGGATGCTGGGCCCTGGACACGAGGGGAGTGAATTGGGAAGTCCCATATCAATTCGAGAAGGGAACAAGTATCAGCCAGTAAACTAGTTTTAAAAATCTTGAGGGGAAACTCGAAAGATAAAGTACAAAGAGAACAATATTGGGTAGTACTGAACAATATTGGGTAGTAGTGGGTTTGAGCCGTGTATATATATATATTATAATATAAAAGTCAAAAGAAATGAGCCTTGTTGTTCATTATTTGTAGTTTTATAGTTATCGCTCTCGTCTCTTTGTTTGGCGACGAAGAAAAAATCAATCTGATCGTTCAAGCAATCTCAAGCGAAGAAGAGAGGGAAAAATGAGTTACTACAACCAGCCACCGCCTCCCGTCGGCGTTCCTCCGCCGCAAGGTAACATCTAAACCGATACTCTTACTTTTTCCCTTTCTTACATCCGGTGCACTTTCTTTGATTTCTAAGGTTCAAATCGAATGGATCTTGCTGTCTTCTTCCACAAAATCGATTTAATCTTTGTTTTCGTTTCGATTTGACCGATTTTGGCTGCGATTCTGTGAATTTCAACGATTTTAGGTTATCCGCCGCAAGGATATCCGCCGAAAGACGCTTATCCACCACCAGGATATCCACCGCAGGGCGGTTATCCTCCTGCTGGTTATCCTCCGCAGGGATATCCGCCTCCGGCGTATGGTCCGGCGTACGGACCACCTCAGCCTCAACATTCAAACCAAAAGAAAGAAGTTGGATTCGTCGAAGGCTGGTAAGTCTCTGCTTCTCTTTCACTTTACAACCTTAGTTGATGCGATTTCGTTGGCGTTTTCGAGTTGAAATTGAGTCTGCGCGTCTTCGCGGCGGCGAAGTACGGTTACGGTTACCGATTAGTTGATTAATCCGTCTTCTGCGGCGGAGATTTTAGATTTCGAGTTTTTGTTTTCTTTTTCATATATATATATATATATTTTATTGAATTTAATTTTAGTTTTCGTTTTGAAAAAGAACGCATTCGACGATTTAATGGCCTTTCAGTCATTTCACATATAAATTATATATAATATATATATATATGTATATATGTGTGTATATATTATATATTCAAAGTCAAATTTCCAAGCGTTGATTTTCGTTATTAAAAACTTAATTTTGACTAAAAATTTGTCATATTATATTAATTTAGACTCCAAACTTTTAATAAATATTGTAATTATTACTATTGATTCAATTTTCATTAATTTTTCTACTAATTTTAATTTAAAAAATGGTGTAAAAACCTTCCTAAACTTTATCATTTGAATAAAATAAAACTTAGCACAAAATTAAGGTTAATATATATATATATATATATATATAAATCAATCATTGAATAAGTTTCTAAAATTAGTAAATTCCAACAAAAACATTTTGTATATTATTTCATCAATTTTATATGATATTTATGTTTTATAATTTATAAAATGTATAAATTAAATATATAATGAACATTTCCGTAATTTGGATTTAAAATAGATTTATTGAGTATTTTATTTCCATCTTAATTAGTTCCTAATGAAATTAAATGGTTATTATATATATATATATGAAAAAAGGTGCTGAGTTGGTTTCTAAATTTTGCAGTTTGGCTGCTCTTTGTTGTTGCTTTGTCTTGGATGTATGCTTTTGATCACGACCTTCTTCCTGTTTTATTCATCATATTGCGTACAGAATTTGAATTTCCATTTGGATTTGGATTTGTATTCGAATTTGAATTTGAATTTGATCTTTTGTCAGTTTGTAATATCATCTCTCATTCATACTTCTTCAACCTTGCTGGGAAAGTATATATTTTTCCTTTTTTGGTTATACTGTACTTAAATTTGGAATTTAGTTCTTAAATTTACACGAGAGTTTGATATTCAAATCTTTCTTCTTCGGACGTATTAATTT

mRNA sequence

ATGATTTTTTATAGTTATCGCTCTCGTCTCTTTGTTTGGCGACGAAGAAAAAATCAATCTGATCGTTCAAGCAATCTCAAGCGAAGAAGAGAGGGAAAAATGAGTTACTACAACCAGCCACCGCCTCCCGTCGGCGTTCCTCCGCCGCAAGGTTATCCGCCGCAAGGATATCCGCCGAAAGACGCTTATCCACCACCAGGATATCCACCGCAGGGCGGTTATCCTCCTGCTGGTTATCCTCCGCAGGGATATCCGCCTCCGGCGTATGGTCCGGCGTACGGACCACCTCAGCCTCAACATTCAAACCAAAAGAAAGAAGTTGGATTCGTCGAAGGCTGTTTGGCTGCTCTTTGTTGTTGCTTTGTCTTGGATGTATGCTTTTGATCACGACCTTCTTCCTGTTTTATTCATCATATTGCGTACAGAATTTGAATTTCCATTTGGATTTGGATTTGTATTCGAATTTGAATTTGAATTTGATCTTTTGTCAGTTTGTAATATCATCTCTCATTCATACTTCTTCAACCTTGCTGGGAAAGTATATATTTTTCCTTTTTTGGTTATACTGTACTTAAATTTGGAATTTAGTTCTTAAATTTACACGAGAGTTTGATATTCAAATCTTTCTTCTTCGGACGTATTAATTT

Coding sequence (CDS)

ATGATTTTTTATAGTTATCGCTCTCGTCTCTTTGTTTGGCGACGAAGAAAAAATCAATCTGATCGTTCAAGCAATCTCAAGCGAAGAAGAGAGGGAAAAATGAGTTACTACAACCAGCCACCGCCTCCCGTCGGCGTTCCTCCGCCGCAAGGTTATCCGCCGCAAGGATATCCGCCGAAAGACGCTTATCCACCACCAGGATATCCACCGCAGGGCGGTTATCCTCCTGCTGGTTATCCTCCGCAGGGATATCCGCCTCCGGCGTATGGTCCGGCGTACGGACCACCTCAGCCTCAACATTCAAACCAAAAGAAAGAAGTTGGATTCGTCGAAGGCTGTTTGGCTGCTCTTTGTTGTTGCTTTGTCTTGGATGTATGCTTTTGA

Protein sequence

MIFYSYRSRLFVWRRRKNQSDRSSNLKRRREGKMSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAGYPPQGYPPPAYGPAYGPPQPQHSNQKKEVGFVEGCLAALCCCFVLDVCF

Homology

[Close]

BLAST of Cp4.1LG15g04340 vs. ExPASy Swiss-Prot
Match: Q8S8M0 (Cysteine-rich and transmembrane domain-containing protein WIH2 OS=Arabidopsis thaliana OX=3702 GN=WIH2 PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 9.2e-28
Identity = 71/102 (69.61%), Postives = 75/102 (73.53%), Query Frame = 0


Query: 34  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQG----GYPPAGYPPQGYP---- 93
           MS YNQ  PPVGVPPPQGYPP+GY PKDAYPP GYPPQG    GYPP GYP QGYP    
Sbjct: 1   MSQYNQ--PPVGVPPPQGYPPEGY-PKDAYPPQGYPPQGYPQQGYPPQGYPQQGYPQQGY 60

Query: 94  PPAYGPAYGPPQPQHSNQKKEVGFVEGCLAALCCCFVLDVCF 128
           PP Y P Y PP PQH  Q+   GF+EGCLAALCCC +LD CF
Sbjct: 61  PPPYAPQY-PPPPQHQQQQSSPGFLEGCLAALCCCCLLDACF 98

[Close]

BLAST of Cp4.1LG15g04340 vs. ExPASy Swiss-Prot
Match: Q8LCL8 (Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thaliana OX=3702 GN=At3g57160 PE=3 SV=2)

HSP 1 Score: 89.0 bits (219), Expect = 4.3e-17
Identity = 57/101 (56.44%), Postives = 61/101 (60.40%), Query Frame = 0


Query: 38  NQPPPPVGVPPPQGYPPQGYPPKDAYPPP-------GYPPQGGYPPAGYPPQGYPPPAYG 97
           +Q PP VGVPP   YP +G PPKDAYPPP       GYPP  GYP  GYPPQGYPP  Y 
Sbjct: 2   SQQPPAVGVPPSHAYPAEG-PPKDAYPPPGQPYPQQGYPPPQGYPQQGYPPQGYPPQGYP 61

Query: 98  ----PAYGPPQPQHSNQKKEVGFVEGCLAALCCCFVLDVCF 128
               P  G P  Q   QK   G +EGC+AALCC  VLD CF
Sbjct: 62  EQGYPQQGYPPQQQQQQKHSPGMLEGCIAALCCYCVLDACF 101

[Close]

BLAST of Cp4.1LG15g04340 vs. ExPASy Swiss-Prot
Match: Q9FJW3 (Cysteine-rich and transmembrane domain-containing protein WIH1 OS=Arabidopsis thaliana OX=3702 GN=WIH1 PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 6.2e-16
Identity = 56/95 (58.95%), Postives = 60/95 (63.16%), Query Frame = 0


Query: 37  YNQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPP----AGYPPQGYPPPAYGPA 96
           Y+Q   PVG P     PPQGYPPKD YPP GYPP  GYPP     GYP QGYPPP Y  A
Sbjct: 2   YHQEQHPVGAP-----PPQGYPPKDGYPPAGYPP-AGYPPPGYAQGYPAQGYPPPQYSQA 61

Query: 97  YGPPQPQHSNQKKEVGFVEGCLAALCCCFVLDVCF 128
                PQ   QK+  G +EGCLAALCCC +LD CF
Sbjct: 62  -----PQ---QKQNAGMLEGCLAALCCCCLLDACF 82

[Close]

BLAST of Cp4.1LG15g04340 vs. ExPASy Swiss-Prot
Match: P09241 (Rhodopsin OS=Enteroctopus dofleini OX=267067 GN=RHO PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.3e-10
Identity = 42/73 (57.53%), Postives = 48/73 (65.75%), Query Frame = 0


Query: 26  LKRRREGKMSYYNQPPPPVGVPPPQGYPPQG-YPPKDAYPPPGYPPQGGYPPAGYPPQGY 85
           + ++ + + + Y  PPPP G  PPQGYPPQG YPP   YPP GYPPQ GYPP GYPPQG 
Sbjct: 376 MMQKMQAQQAAYQPPPPPQGY-PPQGYPPQGAYPPPQGYPPQGYPPQ-GYPPQGYPPQGA 435

Query: 86  PPPAYGPAYGPPQ 98
           PP    P   PPQ
Sbjct: 436 PPQVEAPQGAPPQ 446

[Close]

BLAST of Cp4.1LG15g04340 vs. ExPASy Swiss-Prot
Match: Q17094 (Rhodopsin (Fragment) OS=Alloteuthis subulata OX=54069 GN=RHO PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.6e-08
Identity = 42/67 (62.69%), Postives = 42/67 (62.69%), Query Frame = 0


Query: 33  KMSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAGYPPQGYPPPAYGPA 92
           KM    Q  P     PPQGYPPQGYPP    PP GYPPQ GYPP GYPPQGYPPP  GP 
Sbjct: 372 KMQAQQQQQPAY---PPQGYPPQGYPPP---PPQGYPPQ-GYPPQGYPPQGYPPPPQGPP 431

Query: 93  YGPPQPQ 100
              P PQ
Sbjct: 432 PQGPPPQ 431

[Close]

BLAST of Cp4.1LG15g04340 vs. NCBI nr
Match: XP_023553865.1 (cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 196 bits (497), Expect = 1.71e-62
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0


Query: 34  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAGYPPQGYPPPAYGPAY 93
           MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAGYPPQGYPPPAYGPAY
Sbjct: 1   MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAGYPPQGYPPPAYGPAY 60

Query: 94  GPPQPQHSNQKKEVGFVEGCLAALCCCFVLDVCF 127
           GPPQPQHSNQKKEVGFVEGCLAALCCCFVLDVCF
Sbjct: 61  GPPQPQHSNQKKEVGFVEGCLAALCCCFVLDVCF 94

[Close]

BLAST of Cp4.1LG15g04340 vs. NCBI nr
Match: XP_022952198.1 (cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita moschata])

HSP 1 Score: 192 bits (489), Expect = 2.84e-61
Identity = 93/94 (98.94%), Postives = 93/94 (98.94%), Query Frame = 0


Query: 34  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAGYPPQGYPPPAYGPAY 93
           MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPP GYPPQGGYPPAGYPPQGYPPPAYGPAY
Sbjct: 1   MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPAYGPAY 60

Query: 94  GPPQPQHSNQKKEVGFVEGCLAALCCCFVLDVCF 127
           GPPQPQHSNQKKEVGFVEGCLAALCCCFVLDVCF
Sbjct: 61  GPPQPQHSNQKKEVGFVEGCLAALCCCFVLDVCF 94

[Close]

BLAST of Cp4.1LG15g04340 vs. NCBI nr
Match: XP_022972438.1 (cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita maxima])

HSP 1 Score: 180 bits (456), Expect = 2.70e-56
Identity = 89/94 (94.68%), Postives = 89/94 (94.68%), Query Frame = 0


Query: 34  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAGYPPQGYPPPAYGPAY 93
           MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAGYPPQGYPPPAY    
Sbjct: 1   MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAGYPPQGYPPPAY---- 60

Query: 94  GPPQPQHSNQKKEVGFVEGCLAALCCCFVLDVCF 127
           GPPQPQH NQKKEVGFVEGCLAALCCCFVLDVCF
Sbjct: 61  GPPQPQHPNQKKEVGFVEGCLAALCCCFVLDVCF 90

[Close]

BLAST of Cp4.1LG15g04340 vs. NCBI nr
Match: XP_038888465.1 (cysteine-rich and transmembrane domain-containing protein WIH2-like [Benincasa hispida])

HSP 1 Score: 170 bits (431), Expect = 2.04e-52
Identity = 84/95 (88.42%), Postives = 87/95 (91.58%), Query Frame = 0


Query: 34  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAGYPPQGYPPP-AYGPA 93
           MSYY QPPPPVGVPPPQG+PPQGYPPKD YPPPGYPPQGGYPPAGYPPQG+PPP AY PA
Sbjct: 1   MSYYAQPPPPVGVPPPQGFPPQGYPPKDGYPPPGYPPQGGYPPAGYPPQGHPPPPAYAPA 60

Query: 94  YGPPQPQHSNQKKEVGFVEGCLAALCCCFVLDVCF 127
           YG P P H NQKKEVGFVEGCLAALCCCF+LDVCF
Sbjct: 61  YGHPPPHHQNQKKEVGFVEGCLAALCCCFMLDVCF 95

[Close]

BLAST of Cp4.1LG15g04340 vs. NCBI nr
Match: XP_011658867.1 (cysteine-rich and transmembrane domain-containing protein WIH2 [Cucumis sativus] >KGN43843.1 hypothetical protein Csa_017085 [Cucumis sativus])

HSP 1 Score: 167 bits (424), Expect = 2.53e-51
Identity = 86/95 (90.53%), Postives = 87/95 (91.58%), Query Frame = 0


Query: 35  SYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAGYPPQGYPPPA-YGPAY 94
           SYY QPPPPVGVPPPQGYPPQGYPPKDAYPP GYPPQGGYPPAGYPPQGYPPP  YGPAY
Sbjct: 3   SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPPPYGPAY 62

Query: 95  GP-PQPQHSNQKKEVGFVEGCLAALCCCFVLDVCF 127
           G  P PQH NQKKEVGFVEGCLAALCCCF+LDVCF
Sbjct: 63  GHHPPPQHQNQKKEVGFVEGCLAALCCCFMLDVCF 97

[Close]

BLAST of Cp4.1LG15g04340 vs. ExPASy TrEMBL
Match: A0A6J1GJV9 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita moschata OX=3662 GN=LOC111454944 PE=4 SV=1)

HSP 1 Score: 192 bits (489), Expect = 1.38e-61
Identity = 93/94 (98.94%), Postives = 93/94 (98.94%), Query Frame = 0


Query: 34  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAGYPPQGYPPPAYGPAY 93
           MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPP GYPPQGGYPPAGYPPQGYPPPAYGPAY
Sbjct: 1   MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPAYGPAY 60

Query: 94  GPPQPQHSNQKKEVGFVEGCLAALCCCFVLDVCF 127
           GPPQPQHSNQKKEVGFVEGCLAALCCCFVLDVCF
Sbjct: 61  GPPQPQHSNQKKEVGFVEGCLAALCCCFVLDVCF 94

[Close]

BLAST of Cp4.1LG15g04340 vs. ExPASy TrEMBL
Match: A0A6J1I9Y5 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita maxima OX=3661 GN=LOC111470998 PE=4 SV=1)

HSP 1 Score: 180 bits (456), Expect = 1.31e-56
Identity = 89/94 (94.68%), Postives = 89/94 (94.68%), Query Frame = 0


Query: 34  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAGYPPQGYPPPAYGPAY 93
           MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAGYPPQGYPPPAY    
Sbjct: 1   MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAGYPPQGYPPPAY---- 60

Query: 94  GPPQPQHSNQKKEVGFVEGCLAALCCCFVLDVCF 127
           GPPQPQH NQKKEVGFVEGCLAALCCCFVLDVCF
Sbjct: 61  GPPQPQHPNQKKEVGFVEGCLAALCCCFVLDVCF 90

[Close]

BLAST of Cp4.1LG15g04340 vs. ExPASy TrEMBL
Match: A0A0A0K2W8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G070830 PE=4 SV=1)

HSP 1 Score: 167 bits (424), Expect = 1.23e-51
Identity = 86/95 (90.53%), Postives = 87/95 (91.58%), Query Frame = 0


Query: 35  SYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAGYPPQGYPPPA-YGPAY 94
           SYY QPPPPVGVPPPQGYPPQGYPPKDAYPP GYPPQGGYPPAGYPPQGYPPP  YGPAY
Sbjct: 3   SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPPPYGPAY 62

Query: 95  GP-PQPQHSNQKKEVGFVEGCLAALCCCFVLDVCF 127
           G  P PQH NQKKEVGFVEGCLAALCCCF+LDVCF
Sbjct: 63  GHHPPPQHQNQKKEVGFVEGCLAALCCCFMLDVCF 97

[Close]

BLAST of Cp4.1LG15g04340 vs. ExPASy TrEMBL
Match: A0A1S3BZZ2 (cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo OX=3656 GN=LOC103495315 PE=4 SV=1)

HSP 1 Score: 162 bits (411), Expect = 1.21e-49
Identity = 84/96 (87.50%), Postives = 86/96 (89.58%), Query Frame = 0


Query: 35  SYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAGYPPQGYPP-PAYGPAY 94
           SYY QPPPPVGVPPPQGYPPQGYPPKDAYPP GYPPQGGYPPAGYPPQGYPP P YGPAY
Sbjct: 3   SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPQPPYGPAY 62

Query: 95  G--PPQPQHSNQKKEVGFVEGCLAALCCCFVLDVCF 127
           G  PP    +NQKKEVGFVEGCLAALCCCF+LDVCF
Sbjct: 63  GGHPPPQYQNNQKKEVGFVEGCLAALCCCFMLDVCF 98

[Close]

BLAST of Cp4.1LG15g04340 vs. ExPASy TrEMBL
Match: A0A6J1D3P4 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Momordica charantia OX=3673 GN=LOC111017311 PE=3 SV=1)

HSP 1 Score: 160 bits (404), Expect = 1.21e-48
Identity = 78/94 (82.98%), Postives = 83/94 (88.30%), Query Frame = 0


Query: 34  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAGYPPQGYPPPAYGPAY 93
           MSYYNQPPPPVGVPPPQGYPP+GYP KDAYPPPGYPPQ GYPP GYPPQGYPPPAYGPAY
Sbjct: 1   MSYYNQPPPPVGVPPPQGYPPEGYP-KDAYPPPGYPPQAGYPPPGYPPQGYPPPAYGPAY 60

Query: 94  GPPQPQHSNQKKEVGFVEGCLAALCCCFVLDVCF 127
           G P PQ   Q++ VGF+EGCLAALCCC +LD CF
Sbjct: 61  GQPPPQQQQQQQSVGFLEGCLAALCCCCLLDACF 93

[Close]

BLAST of Cp4.1LG15g04340 vs. TAIR 10
Match: AT2G41420.1 (proline-rich family protein )

HSP 1 Score: 124.4 bits (311), Expect = 6.5e-29
Identity = 71/102 (69.61%), Postives = 75/102 (73.53%), Query Frame = 0


Query: 34  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQG----GYPPAGYPPQGYP---- 93
           MS YNQ  PPVGVPPPQGYPP+GY PKDAYPP GYPPQG    GYPP GYP QGYP    
Sbjct: 1   MSQYNQ--PPVGVPPPQGYPPEGY-PKDAYPPQGYPPQGYPQQGYPPQGYPQQGYPQQGY 60

Query: 94  PPAYGPAYGPPQPQHSNQKKEVGFVEGCLAALCCCFVLDVCF 128
           PP Y P Y PP PQH  Q+   GF+EGCLAALCCC +LD CF
Sbjct: 61  PPPYAPQY-PPPPQHQQQQSSPGFLEGCLAALCCCCLLDACF 98

[Close]

BLAST of Cp4.1LG15g04340 vs. TAIR 10
Match: AT3G49845.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 90.9 bits (224), Expect = 8.0e-19
Identity = 57/113 (50.44%), Postives = 64/113 (56.64%), Query Frame = 0


Query: 41  PPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAGYPP-----------QGYPPPAY 100
           PPP G PP +GYPP GYPP   YPPP Y PQ GYPPAGYPP           QGYPPP Y
Sbjct: 13  PPPQGYPPKEGYPPAGYPPPAGYPPPQY-PQAGYPPAGYPPPQQGYGQGYPAQGYPPPQY 72

Query: 101 G-------PAYGPPQPQH--------SNQKKEVGFVEGCLAALCCCFVLDVCF 128
                   P  GPP P +         ++K   GF+EGCLA LCCC +L+ CF
Sbjct: 73  PQGHPPQYPYQGPPPPHYGQAPPKNKKDKKDSGGFMEGCLAMLCCCVLLEACF 124

[Close]

BLAST of Cp4.1LG15g04340 vs. TAIR 10
Match: AT5G67600.1 (unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49845.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 85.1 bits (209), Expect = 4.4e-17
Identity = 56/95 (58.95%), Postives = 60/95 (63.16%), Query Frame = 0


Query: 37  YNQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPP----AGYPPQGYPPPAYGPA 96
           Y+Q   PVG P     PPQGYPPKD YPP GYPP  GYPP     GYP QGYPPP Y  A
Sbjct: 2   YHQEQHPVGAP-----PPQGYPPKDGYPPAGYPP-AGYPPPGYAQGYPAQGYPPPQYSQA 61

Query: 97  YGPPQPQHSNQKKEVGFVEGCLAALCCCFVLDVCF 128
                PQ   QK+  G +EGCLAALCCC +LD CF
Sbjct: 62  -----PQ---QKQNAGMLEGCLAALCCCCLLDACF 82

[Close]

BLAST of Cp4.1LG15g04340 vs. TAIR 10
Match: AT5G17650.1 (glycine/proline-rich protein )

HSP 1 Score: 57.8 bits (138), Expect = 7.5e-09
Identity = 39/70 (55.71%), Postives = 42/70 (60.00%), Query Frame = 0


Query: 32  GKMSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAGYPPQGYPPPAYGP 91
           G  S Y  PPP    PPP GYPP  YPP   YPP GYPP  GYPPAGYP  GY      P
Sbjct: 38  GYGSSYPYPPP----PPPHGYPPVAYPPHGGYPPAGYPP-AGYPPAGYPAHGY------P 96

Query: 92  AYGPPQPQHS 102
           ++G P+P HS
Sbjct: 98  SHGYPRPSHS 96

[Close]

BLAST of Cp4.1LG15g04340 vs. TAIR 10
Match: AT5G45350.1 (proline-rich family protein )

HSP 1 Score: 55.1 bits (131), Expect = 4.9e-08
Identity = 36/62 (58.06%), Postives = 38/62 (61.29%), Query Frame = 0


Query: 51  GYPPQGYPPKDAYPPPGYPPQGGYPPAG-YPPQGYPPPAYGPAYG--PPQPQHSNQKKEV 110
           GYPP GYPP  AYPP GYP QG  PP G YPP GYPP AY PA G  PP P +       
Sbjct: 15  GYPPAGYPPPGAYPPAGYPQQGYPPPPGAYPPAGYPPGAYPPAPGGYPPAPGYGGYPPAP 74

The following BLAST results are available for this feature:

BLAST of Cp4.1LG15g04340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S8M0	9.2e-28	69.61	Cysteine-rich and transmembrane domain-containing protein WIH2 OS=Arabidopsis th...	[more]
Q8LCL8	4.3e-17	56.44	Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thali...	[more]
Q9FJW3	6.2e-16	58.95	Cysteine-rich and transmembrane domain-containing protein WIH1 OS=Arabidopsis th...	[more]
P09241	1.3e-10	57.53	Rhodopsin OS=Enteroctopus dofleini OX=267067 GN=RHO PE=2 SV=1	[more]
Q17094	3.6e-08	62.69	Rhodopsin (Fragment) OS=Alloteuthis subulata OX=54069 GN=RHO PE=3 SV=1	[more]

BLAST of Cp4.1LG15g04340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023553865.1	1.71e-62	100.00	cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita p...	[more]
XP_022952198.1	2.84e-61	98.94	cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita m...	[more]
XP_022972438.1	2.70e-56	94.68	cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita m...	[more]
XP_038888465.1	2.04e-52	88.42	cysteine-rich and transmembrane domain-containing protein WIH2-like [Benincasa h...	[more]
XP_011658867.1	2.53e-51	90.53	cysteine-rich and transmembrane domain-containing protein WIH2 [Cucumis sativus]...	[more]

BLAST of Cp4.1LG15g04340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GJV9	1.38e-61	98.94	cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita...	[more]
A0A6J1I9Y5	1.31e-56	94.68	cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita...	[more]
A0A0A0K2W8	1.23e-51	90.53	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G070830 PE=4 SV=1	[more]
A0A1S3BZZ2	1.21e-49	87.50	cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo...	[more]
A0A6J1D3P4	1.21e-48	82.98	cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Momordica...	[more]

BLAST of Cp4.1LG15g04340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G41420.1	6.5e-29	69.61	proline-rich family protein	[more]
AT3G49845.1	8.0e-19	50.44	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G67600.1	4.4e-17	58.95	unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures;...	[more]
AT5G17650.1	7.5e-09	55.71	glycine/proline-rich protein	[more]
AT5G45350.1	4.9e-08	58.06	proline-rich family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00239	RHODOPSNTAIL	coord: 48..59 score: 94.44 coord: 78..90 score: 44.87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..94
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..103
None	No IPR available	PANTHER	PTHR31568:SF88	CYSTEINE-RICH AND TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN A-LIKE	coord: 34..127
IPR044850	Cysteine-rich and transmembrane domain-containing protein WIH1/2-like	PANTHER	PTHR31568	RCG49325, ISOFORM CRA_A	coord: 34..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG15g04340.1	Cp4.1LG15g04340.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane