Cp4.1LG15g03370 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG15g03370
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	expansin-like B1
Location	Cp4.1LG15: 4557478 .. 4570586 (+)
RNA-Seq Expression	Cp4.1LG15g03370
Synteny	Cp4.1LG15g03370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAATCGTGCAACATTTGCTCCCACAACGCTGATTCCAGAATCTTCGAACTTCAATTCTATTCCAAACACGCAAAAATAGCTCTCCTTATGTTCTTCGACGTCTTCTCCTTCTTCACTCTGATCATACTCACTTTGCTCTCGGTGATCGTCTCCCATGCTTCGAATTCGAGCTCTTCTTCTACTTGTGTAGTGAAAGATACAGAGGAGGACGCTGAACTCCGCGAAATGGCTACCATGGAGAGCTTGATCGGCCTCGTTAACCGTATACAGAGGGCTTGTACTGTTCTTGGTGATTATGGCGGTGATTCTGCCTTGCCTACTCTTTGGGAGGCTCTTCCATCCGTCGTCGTCGTTGGCGGCCAGGTAAATTGTGCTGTGACTTTTATTGATCTGTAGATTGTGTGATGCTTGTCTTTGTATGGTACTGTTTTTGGATGCATGTGCATGTGTGTTTTTTTTCAGGTGGTTTTTCTTGCATGCGAGGTTAATTTGTTGTGCTCGGTTTGAAATGTAGAGCTCCGGAAAATCATCAGTATTGGAGAGCATCGTTGGTCGTGATTTTCTTCCCAGGGGATCAGGTAAGTCACTGTTGGTTCTAGTTTTGTTTTCTTTCAGAAAGAGGTAAAATGATCAAAGTTGAGTTTCGAGGTGTGGAGCTATGGAAGAAACAATTGCATGAAAATTTCTGCTAATTTTTGTGGTTATTATTCTCTATAATTAGTCAGATTGAGTCGCGCGGTCATACCACAAGAACAATCAACAGAGTATGTAATGGAAAAGGAAAAACAATAAAACTATAAGAGCAAGAAGAACTCATGTAAACGATTTTAATGATTCGGTCATGAGATCTTTGTTCCATGTTAATGTTAGTCGAAGAACTTTTTCTATCAGTGACTAGAAGAATACAGATTCTGAAGGGAACAGTAAACCTCTATCCGGAGAGTTATATTCAATTAAATTGGAATTTACTACTATTATCGAAAAGATAGAAATACCTTACTGGTTTCTGAACTGAAAGAAACCTCTATAATAAATCATATTCAAATTTCTGCTGCCATAGCAGGCTTTTGATCCAAAGATTAACGATGTCCCTAATACACAATAAGGAAATAATTAGATAAACTCACCAACTGATAATTTTATTTTCCAGGAATTGTTACGCGGAGGCCTCTAGTTTTGCAGCTCCAGAAGACAGAACCAGGAAGAGAGGAGTATGCAGAATTTCTTCATCTGCCCAAGAAAAAATTCTCAGACTTCTGTACGTCATTTTGTTTTTTTAATATTATAAATGGTACTCATTCTGTATTTTAGACTTTAAAATATCGTCAGGTTGGTTGATGAATAAGTTACTTTAATGTTCCTTAGAAAAGTTTCAGTCAGAAAAGTTATCTTGCTGTCAATTTCATATTTAGTTTCAGAGTACTTCCTGTTATGCTAATTTCATTACTCGAGGGGAAATAAGTACTCTAATTTTGTAGTTTTTCAAGGAAATTTTCAGTTTTAAATAACCTTTAGCAGCTTTTCATAAAAAGAGAAAATAAATAATGTTTCAAAAAACGAAGTACGTATTGATTTTTTTGTGAACTGTTTGTTGTATACTACTGCTTAGTACAAGTTCTTTCCCTGAAAATTTTACCTTCTCTAAAAAAACCATTAGTTTTAGCGTTTCTATAAATGTTAGATGAAAACATCTGTAAAACAAATTAATGGAGATATATTAGGATTCAAATTCACGTACACTTAGTCATGGAAGTTCAAAAGTTTAGGAACTCCTAAATTCCATAGTATCTCCACTTATCTCTCACTGTCTTGCACCACAAACAAAGTTGAACGAGAGCAAGCTGCTTTAAAATTTTAACAGGTGTTGGGATGTCTCTGTAGATACATACACATCGTGCTGCTTGAAATGTCTGCAATATATTTGAAATGTAAGATGTAGTAGTTCCTAAGTTTACAAAGCCGTATGCTATGATGTATATCTTATCACGTTTTCCACTATCGAATCAAAACCAATGAAATGAAAATTTAAAGCCTTACCCTAAAGGGATCCATATCAGTAAAATTATCTAGATATCTTCTCTGATATCATTGTTAACTTCTCTTAGTTTTTTGCAGCAATGGTTAGGAAGGAAATTGAAGATGAAACTAATAGTTTGACTGGGAGATTAAAACAGATTTCTCCTGTTCCAATTCATCTTAGTATCTACTCTCCAAATGGTAACAAATCTAGATTTCTAGTGTGGTTCTCATTATTCAGTGACATCTGTTTTCTGTATGGTCAATGATTCTTCCAGCTGTACCTTCACTAGTTTCTTGCCTTACTGGTTTTTACTGATGAGTCATTAGTTTTTGTATTCATTGTAGCTAGTACATTATACATCGAGATGTGTTCTTTTTATTATGCCACATTTTAAAATTTGATTAGGTGAGAAATGTTACTACATTATTAAGTGATAAATCATAATTTTACATTGGATAGATGTATCATTTCTGTTTCCTTTGACCCTATATCTAAAAGACTTAGTGCCACGTTTCTAGAATGATTATAATTTCAAAGCACGCTTCTGCTTGGTTTGCCTGTTTGTTTCATAGGATATAATTGTGGAATTCTTCCTCTTAATGAATTTCATCCATATTATTACACTTCACATCAGATGCTGTTTTTTCACATTCTTTTGGTTTGATAAGACAAGTATTCAAAATAATATTGCCTAGTTTGATGAAGAACTGAACTATATATAGGATAGATATTCTGTTTCTGATGACTTTGACATTCATCTCCAAGAATCAGCTATCGCATTTCTAGGATAGTCATTATTTCTTAATATGGTATTATGATTCTGCTTTCTTTGCCCATTTGTATCATCAATTGGATAATTCATGCATTATTTTCATGAATGAAGTTAATTCGTATTATTATGTATTCTTCTCTGTGTTAACTGATGATGAAAATCTTTTTGGTTTCTTAATGTTAATCTGATCGCAGTGGTCAATTTGACACTGATAGATTTGCCTGGTTTAACAAAGGTTGCTGTAGGTAAACTTCCACCATTTCATTATAAACCATTATAAAATAACATCACAAGTTCCAACCTTATTTTGAGAGGTTAATAAATTTATTTGCTGCAGAAGGACAGCCTGAGAGCATCGTTCAGGATATTGAGACAATGGTCCGTACTTATGTCGAAAAGGTAAGGAAATATCTTTTGCTATAAACTTTTTGTTGCCAGTTTTACTGGAGTTACTTCTTTGAAATTGTTTTCATTGGAGATAAAATAAAGTAGATTCGCCTGAAAATTGTGTGTGCTGGACTGTGAAGAGACAATCAAACTCATATGGAAAAATAGAAAATGGAGTTAATTAAACAAAGATTTATGATTTTTCCGGCAATTTTTGCTCCATTTCCTCCCTTAATTGTACTATAGAATATTGAAATACTGCCTTGGATAAAATCAATGAAGTATTGACATCCCAGTTCAGTAATTCTTCCTCAAACTTAGGATACGAGTTGCAGTTCTTAAGACATTAATGGAATTTGCATTTTACTAATAAAAATACAATCTGGAGAAAAGCTGGGAGAGTGTTTATTTTGAAATTTCCAGCAAGCTGAAGTTTCCTGATCTGATTAAGGATAAATTGAAAACTTGACTGCAGCCAAACTGCATTATTTTGGCCATAACTTCAGCTAATCAAGATATTGCAACGTCTGATGCTATTAAACTTTCTCGAGAGGTTGACCCCACANTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCCGATGTCTCCAGTTATGAATGAATTATGCAGTCTTATATGCATGTGTTTTTGTAATGCATGCTTATATCTGTCTTTCTCTCTCTGTTATTTCCTAGGTGAAAGGACATTTGGGGTGCTGACAAAGCTTGATTTGATGGATAAAGGAACAAATGCTTTGGAAGTAAGGACCTAGTTTTTTTTACGTGTTCAACTCTATATTTTAGTGATCACTTGCCCATTGAATGATGCAACTTTATTTATTGGGTTCTAAAATTACGTGATTCATTGAGATTGCTCTATTGATGTTATTTCATAAAAATTTACAATAATATCAAGCACCACATGTGTTGTAGCCAGAAATGTTGTAAATGTAATTAATTCCTTGAAAAATTAATTCTAGAATGAGTTTAAGCCCATTCAAATAGGTTTTAGGCAGATACCCCTTCAAAACTGATTCCTAATTTAATGCACGGTAAATTAGACCCAAAACCCACCGAGGCCAAAATCAGTTGAAAACAATTGAAATATTAAACATAGAGTGCAAGGAAGATACCTGGTTACACCATTATGGGAACGAAAAAGCATATTGAGAAAGCAGGGCATTGCGTGAGATGCATATAGTTATGTTACTAACCGGACAGAGAGTTGTTTATAATTGATATTTTAAAATGTTTTAAAATTGACATGATATATAGCAAGCACGTATTATATGGTAAATATGTGCAGTGTGCTTAAGTTTGTTCTATTTCAATCATTGAAATGATGGTATTGCAATAATCTTATCCTTGCATATGCCTTTTTAACCAACCATACTCTTTAACTAAACTAATTCTAGCTAAGTAGGAAAAATGATTTGGGCGTTTTTATTGTTTCGTTTAGGTGATCAATTAATCATGCTTCACAAAACCATCCCTTATAATGTCCACAAACTTCAATCATTTTGCTAATATCCATCGGCATTATTCTATTCCTTATCCAATAGCCATATATAATATAGCATTGATTTACAAATGCTAGAGGAGATTCTGGTGGATGCCTGATGGCCAGCTTTGAAGATTTTTTCACATCTTCTGTGAAAGTGAACTTGTTGAATAACTAAGTTCTGAGTTCTCTCCATTCCACATCATTTCTATTTAGGAAGAGATTGGTATTGTATCAGGATCAGAATACTTCTTAATAATTGATAGATGATGCCACAAACCCTTGGGTTGACCATTCATATGTGTTGATAGATAACTTTGTGATCCCCATTTCTCTATTCCTGCATCCCTTATCATTCCTGCATCTGCCTCAAAATTGCTCTTTGAAGGTTCTTGAAGGAAGGTCCTATCGACTTCATCACCCTTGGGTTGGAGTTGTCAATCGTTCTCAAGCTGATATCAATAAGAATATTGACATGATTACTGCTCGGCGAAGGGAACGTGAATTTTTTGCTTCTAGTGTTGACTACAGACACTTGGCTGACAAAATGGGGTCAGAGTATCTAGCAAAACTTCTCTCAAAGGTTGAGCTGAGATGCATTTACATGCTGACTCGGTCATTAATTCATTATTCTCTTTATTCCTATCGGCATCATAAATAACAATCTCAAATTGACATGATTTCAGCACCTAGAGTCTCTGATAAAAACACGTATGCCAGGCATTGCATGCTTGATTAACAAAAGCATAGACGAAATTGAAGCTGAGCTTCATCAGCTTGGGAAGCCTGTTGCAATTGATTCTGGGGTAATCTTTTATTTCTTGTTCAATAACTCAGATCTAATTTTCTTTGCTATTAACTAATTCATTTGTCTGACACATAACAGGCTCATTTACATACTATCCTTGAGCTTTGCCGTGCTTTTGACCTGGTGTTCAAGGATCATCTCCATGGGGGGTATACAATATATGCTCTCTATTAAATTTTTATCAGCAAAAGCGTTTTGATCAAGTTCTGTTTGATAATCAATATGTATGTATTTACCAATTCATTGTTCATTGCTGTGCAGGCTTGTCAAGGCAATTATATATGTGTTTTTTGTTGTGCATGTTTCTGTTATCTTCTGCACGACGTACTATTTACTTTTCTAGTAAACTTAATGTTACTTATGAAAGGTTCACTTTATATGTGATGTTATCTTCTTCAACTACATAGCTGGACTAGGATTATGGTTAGTTGTGTTTTTCTCATAACCATTTTTCTTTAAATCTTAGGCGACCTGGTGGTGATCGGATATATAGTGTTTTTGATAATCAGCTCCCTCATGCTCTGAGAAGGCTTCCCTTTGATCACTACCTTTCACTGCAAAATGTGAGGAAGGTGATATCGGAGGCTGATGGATACCAACCTCATCTGATTGCGCCGGAGCATGGTTATCGACGCCTTATTGAAGTTGCAGTCAATTATTTTAGAGGTCCAGCTGAAGCTTCAGTAGATGCTGTAAGTGCCACCTGTTTCTCCCATGCTGTGTTTTCCTATTGATGTGAGCGGTTATTGTTATCATTATTATCATTATTATTTTTTTTGCATTTGGTAGATTCAGTTGATACATTTTATTGATTGATGGTGGGAGAATTTCATTGGAATGATTTTATGTGTTAGGGATCACGAATCTCCACAATGGTATGATATTGTCCATTGTCCTCTTTGAGCGTAAACTCTCTTAGCTTTGCTTTGGCTTCCCCAAAAGGCCTCGTACCAATACTAATGGAGATATAATCCTTACTTATAAATCCATGATTATTCCCTTAATTAGCCAACATGGACTCTCTCCCAACCATCCTCAACAAACAAATATATCTCTACTTTACGAAATATCTATCATATATATGTCTACCAGATTTTTTACTATAAATAGTCATCAGTTCCATATCCCAACAATGTGAAGTATGGCATGAGAAAATACGTGCTTTTAATTTAATGGTAAACTACGTAATTGACTATCAAATAGTAAAAATAGAATTCCCTATTTGTTGTATTCTATCGGATTATGCCTTGTGATTGTGTGCATGTAAAGCAGTGGATTATTTTAAGCTTATCAAACATGCGTTGGTTTTTAGTCCTGTTCTCAAACTTGTCCCTCGGGTACTTTCAGGTTCATTCCATTTTGAAGGAACTTGTTAGAAGATCACTGGCAGAAACTCAGGTCCAAGTCAACAATGTTACATTCTGGTAATGCTAAATGAATAACCATAGAATCATCTGAGCTAATATCTTGAAATGGAACAGGAGCTGAAGCGCTTTCCCACTCTCCAAGCTGAAGTTTCAAGAGCTGCAAATGAAGCGTTAGAGAGATTTCGAGAAGATAGTAAAACGACAACCTTGCGATTGGTTGACATGGAATCCTCCTACATAACAGTCGATTTCTTTCGAAGGCTCCCACAGGATGATGAAAAGGGAGGAATCCCACCAGCTGCAGCTTCCATAGATAGGTATACGGAGACACATTTCCACCAGATAGCATCAAATATTACCTCTTATATCAGGATGGTGTCTGAGACACTGAGGAACAGTATTCCAAAGTCTGTTGTTCATTGTCAAGTCAGGGAGGCAAAGCGATCGATATTAGATTACTTTTATGTGCAATTGGGACAAATGAAGGTATTGAACTTATAGCTGAAAGCCCATTTTTGATCACTTGGAAATACGTTTTATGCTACTGCTTGATTGTTTTGTAGGGTAATCAACTTGCAGCTCTTCTTAACGAAGATCCTGCTTTGAGGGAAAGGCGACAGCAATGTATCAAAAGGCTTGAACTACATAAATCTGCAAGGGATGAGATTGACTCAGTCTCATGGTCCTGATAAGGACAGGTAAAAACTGCACCAGCAAATCTTTCTAATGCAATGGTAAGCATTATATGATCAAATTTTGGTGTATATGAGTGTAAAGCTTGTTTTTCTTAGATTAGGTCCCTTCCTCTTTCTTGCAAGTCTCCGATTTTTGCTTGATTTGTGCCTTTTGTCCTTCCTTGTTTCCCAAGTCTTTTGTCTTTCCCTTGAAACTTTTGATCCATTCAAGTAATTCATTGGGTAAGAAAGGAAATGATTAATTCCGGAACTTATGTCACCTCTCCTTCTAGTTGTTTGTGGTGGCTTTGTTTTTCCTTAGGTTTAGATGGGGAATGTTAACACAAGGAAAATAATTTGGTTTCCTAACAAGTCTTCAATACGAATTTGAGAAACATTTATACTATGGGCTTTAAGGTTATATTATTATATTTTGGCCAAGTTTGGTGAAATATCTCGGACTATTAGTGAGGACTACTGTTAAGATTTACCCAAAGTGGGACTTTAACCCAATTATAGGGACTAAATATTATTTTAATATAGATTTGAACTTCTAATCTTTTGATCAAAATAGTTTGGTTTACCACGACTCTTCATAGTTGTATGATATTGTCAACTTTGAGAATAAAGCTCTCGTGATTTTGTTTTTGGTTTCTCCAAAAGACCTCGTACAAATGAAGATGTATTCCTTACTTATAAATTCATGACCAACTCCTTAATTAGTCAATGTGGGACTCCCTTCCACCAATTCTCCTCTCGAACAAAGTACGCCATAGAGCCTCTTATGAGGAATATGGAGCCTTCGAAAACGAAATCAGAGAGCTTGGATTGCCATATGGAGCCTTCAAACAGCCTCCCTTTAATTGAGGCTCGACTTCTTTTTCTAGAGCCTTTGAGCAAAGTACACAATTTATTCGACACTTGAGTCACTTTTGACTACATCTTTGAGCTCACAACTTTTGTTCGACATTTGAGGATTCTATTCACATGGTTAAGTTAGGGGCATGACTCTGATACTACGTTAGAAACCACGACTCTCTGCAATGGTATGATATTATCCACCTTGAGCATAAATTTTCATGATTTTACTTTTGGTTTTCCCAAAAAGCCTCGTACCAATGAGATGTATTCCTTACTTATAAACCGATGATTCTAGGACTCTTCCTCTACGATCTTCAAGAGTCAAACATTAGGGATCGGAACCTGCTTGGATAAGGGAGAGGAATTTTCTTTTTGGATCTCATTTTCCACTTAAACAGTTGAGAGACGCAAGGAATCTATGATAGGGTGGAATAAAATACTCCATAATGGATTCCATGTCATGAATGATGATGGATTTCTTCTCTCCAGTCTTAGCCTCCCTTCGATTGCAAATCTCTGTCGGCACCAAAAAGTTCTTTGCCGTCCTTTTCTAGCCCTTTGTTAATTGTCAACCAGCATAATTCCATATGCCTAAAAAAAGGTCAATCTTGGCCTTCTTCAAATGCCCCTATAATTTCTTTCCATTAGTAGTAGGCTGCTAATTTCTACCCCCATTGAAACCTAGATGTGCTCAAGATTCAATGAATCCCGAAAATTATTGAGGGGTCGTTTCTTCTTTCTTTCATTAACATTTTTTCGTGTGCTTGCATTGACGTAGTTAATCATGAACTCTCCGTAAATAAGTCGTTAGGATTGTCGAGTCTAATCATTCTATAGGCGGCTTTGTTTGATATCAAGTTATAGGACATATTGGTACTAGAGAGACAGTGTTGGGGCACGAGGGCATTTATATTAATAATATCGAACTCGAGTATTGACATGTCGATAAAATACGAAGATATTGCATTTGATCTGAAATTGATCTAGTGGAAACCAAACAGACTCTCAATGCAGGATGTGAAAAGTAAGACATTTGACAACACCTTTTCAGTGCAAAACCACCAAACTTTTTTCTGATATTAGGCAAACCAATTCAATTGGGTATTTTCTTACTAAAAAACCCTTTGAAGTTCTTTAGGTGAGTCAATGGCTCCGTGGTTTGGTTCAATTTTGTCTGTCTTGATCAAATAATTGCAATTCTAGGCTATAACTTATCCTAAAGTCTGAACTTCTCACGCTCTTGACATGATCAACTTCGAAGATGTTGCCCAAAAGGATTATATATATATATATATATATATATATATATATATATTAATGGGAGAAAGGCAGCTGAGAGAGATAGATCTTAATCTTAATTACTTTATATTATAATCAATCCAAATGGCTCAATTATTTGACTTATGTTGAACTTAAATTATGTCTAATACATGCTTAATCTTTCTATTTCTAATGTATTCTTTTACAGGTCATTGTTTTTAATATATTATTAATACTCACCCTAGTTTAAAATATTAAGACTCGACTTGTTAGATATTACGGAGGTTTAGTGAACACCATGTTGAATCTCTCTACCATTTCCTTCTCTTTCACTTTGGCCAATATGAGTTTACTAAGTACTAGCCGCTTTATCAGGGAATTTTCCATCTTAGGAGGAGCTTTCCAAAGAAATAGCTTAAGTCGCAAATGCTGATTTTGTATAAATTTTTCAAAATTAAGAAATTCATTAGAATGTTGGATGAAAAGTTGACTGAAAAGTTGACTATGTAAAAGAAGTGAGTAGATGGCTTACTAGTTTAAGTTTGAAAGAGTCTAACTATTGTTTGTCAAACATTTTAATAGGGTTTTAATAGATTTGAGAGTAATTTTGAAACGTTTAACAAGACCTTGAAACATGTCTTTTCAAGTGTTAGTAGTGGGACGTTTGGTCTATCGGAGAAGGTTTTTGGTGACAACACTTGGAGATATTATAAGAAAATTCCGACATGAGTAACGAGAAATTCTATGAAAAACACGAGCGTCCACTTTCTACATACAATTAATCTACACAGAGTGAATCAATCCATAATAAACTCTTGAAAGGACGATAACTTTTGAATTAGTTTACCTCTTTTTTACAATTCAGGCTTAAAAATATGCTCTATTAAACCACATTTAAGATTGAAAATACAACAAACCGTCAATTACGATATATATTATAAGCTAACTTTTGTCTTTTGATGATTATAATCACTAACAAAAGAAGTAATACTTTATGGTGGGAAAGTGGTCTTTGTTTCTTGTCCACCAACACCCAAAAAGGAATTCAAATGGACCAAAAAAGGCTAAGGCCAACACAATTCCACTAACCATTTTTAAAATTACATTCAAATTCTTCGGCATAAAAAAAATATATACAACGAAAGCCGAAGGAAATCGGATAGGAATAACCCAAATTTCACTATAAATACTCCAAAAACACTGCCCATTTCAATTCATCACCACATCTTCAAATTCCTTTCCCATTCTTAAAGCTTCTGCTACTCATTTCATTATGCCTCTCTCTTCTCTCTCTTCGGTTTCTGTTTTCGTAATAACTTTGCTTCTCATGCAAAGGGTCTCGGAGAGTGCCACGTGTAATGACTGTTTCACTCGTTCTCGAGCTGCCCATTACCCTAATTCAGAAGAACAAGGAACGGACCGTAAGTACTCGCTCTTAATCTCATATTGGTTAATTTCAAGTTTGTCTCTCTTTGGTTTATGAACTTAATATTATGTTTAGTATACTCGTAAATTCGGTAAAATATTGAATAAATTGACTTATTAGACAAAAAAAAAAAAAAATTATTATTATACAATAAATTAAAAATTCAAAAACATATATTAATTAGAAATTTTTAAGTTAGAAAATTTGTTGCTTTTTTGGCAGATGGAGCGTGTGGGTATGGAACCTTTGGAGCAACGATCAACGGTGGAGATGTTGCAACTGCATCTGAACTTTACAGAGATGGCCTCGGTTGTGGAGCTTGCTACCAGGTGACATAAAATGGTGTTTAAAATCTTTTCTAATATACTTTTTTTTCCGACGAATTAAAAGTGAGTCGGGTTCATATAAATAAAAACTTTATAGGTACCATAATTCTTTTAAAAAATAATTCAAATTTATTATTATTCTTCAAACTAATTCTTAAAACTAAAATTTTCTTTATTATAAAAAATTGAGTCAATAATATAAATGACTGAAGCCAACCCGACTAAATATTTTATACTTAGTATGATTCATTAATTATTTAGGTAGAATAGCTTAAGTTGAAAAAAGTTATAACCCGAACAATTTAATTTGGTCTAAACATGTCTGGTTGAATTGTTCATACGATATAATATTTTGTGAACAGATAAGGTGCGTAGACAGTGAGTTGTGCTCGGAGGAAGGAGCCATGGTGGTGATAACCGATCAAGGGTCAGGCCCAGGCGACTTTATAATGACCCGAAGAGCCTACGCTCGCTTGGCTCAAACCGCTGATGCTGCTGCTTCTTTGTTAGCCCTCGGTGTTATTGACATTGAATACAAAAGGTCAGTTTCCCTTTTTTTTCTTCTCTATGTCGAAATAACAATAATTTTAATTTTGGTCTACAAAATTTATCAAAAGAAAATTAAAAAGATGCCCGACTTTTCTTTCTGAAAAATTATTTGAAGAGATCGTCACAACGTGATCAACAGTTTTCATCGTTGAAAATATTTTGAAATCTAGTGGTTATTAGAGAATTTGTGAATCCACACCATCCATAGTTATTAGGAGACAATCACGAGTCGTGGGACAATCACAAGAGAGATTTTTTTTTTGTTTTTTTTTTGTTCAGGAAGTACACAAATCGACACTTTGAGAGAAAACTATTTCCCTCACTTGGTGAGATCTCACATCGGTTGGAGAGAAGGACGGGTGAATTGTGAGATTCCACATTGGACCGGAAACCTCTCCTTAACAAAAATACTTAGAGGAAGTCCGAAAACAAAAGTCGGAAGAGCGACAATATTTGCTAGTAGTGGGCTTGAGTTATTACATTAAAAAAAAAAAAAAAATATATATATATATATATATATATATCATTCTTGAATCTAAAATATTTTTTTAGGAGATATTTATTCACAAATATTCGACATAAATTTTGAGAGGTCTAATATATACATTTAAGTACCGTAAATACTCATGAAAGGTTTCTCGAGAATTAGGGTTACTACTGTTTATTTTAACCTTATTTTCTCGTGGTTGAACAGAGTAGCTTGTAGCTATCCGTACAAAAACATAACAATTAAGATTGATGAGGCGAGCGATGCTCCTCATTACTTGGCCTTTGTCATAAGGTTTCAACAAGGCAAAAATGATATCACTGCCGTTCAGCTTTGCGAGGTAACCATTTCAACCTTATCAAATAAGGCCTAAACTATTTAATCTTCAACTTAACTTGTTAAAATTTTGAGCTATTTGTAAAATTTGCAGACGAAGAACTTCGTGTGCAAGCTACTAGATCGGAGCTACGGTACCGTGTGGACGACGGCGTCGCCGCCGAGGGGACCGTTGTCGTTGCGAATGTTGCTAACGAACGAGGACGGAGACGAGCAGTGGATCGTCCCCATTAACGATATTCCTCGTGATTGGAAGGCTGGAGATATCTATGATACTGGAGTTCAAGTTAATTAAATTCATCGTCTAAATNTTTT

mRNA sequence

TAAATCGTGCAACATTTGCTCCCACAACGCTGATTCCAGAATCTTCGAACTTCAATTCTATTCCAAACACGCAAAAATAGCTCTCCTTATGTTCTTCGACGTCTTCTCCTTCTTCACTCTGATCATACTCACTTTGCTCTCGGTGATCGTCTCCCATGCTTCGAATTCGAGCTCTTCTTCTACTTGTGTAGTGAAAGATACAGAGGAGGACGCTGAACTCCGCGAAATGGCTACCATGGAGAGCTTGATCGGCCTCGTTAACCGTATACAGAGGGCTTGTACTGTTCTTGGTGATTATGGCGGTGATTCTGCCTTGCCTACTCTTTGGGAGGCTCTTCCATCCGTCGTCGTCGTTGGCGGCCAGAGCTCCGGAAAATCATCAGTATTGGAGAGCATCGTTGGTCGTGATTTTCTTCCCAGGGGATCAGGAATTGTTACGCGGAGGCCTCTAGTTTTGCAGCTCCAGAAGACAGAACCAGGAAGAGAGGAGTATGCAGAATTTCTTCATCTGCCCAAGAAAAAATTCTCAGACTTCTCAATGGTTAGGAAGGAAATTGAAGATGAAACTAATAGTTTGACTGGGAGATTAAAACAGATTTCTCCTGTTCCAATTCATCTTAGTATCTACTCTCCAAATGTGGTCAATTTGACACTGATAGATTTGCCTGGTTTAACAAAGGTTGCTGTAGAAGGACAGCCTGAGAGCATCGTTCAGGATATTGAGACAATGGTCCGTACTTATGTCGAAAAGCCAAACTGCATTATTTTGGCCATAACTTCAGCTAATCAAGATATTGCAACGTCTGATGCTATTAAACTTTCTCGAGAGGTGAAAGGACATTTGGGGTGCTGACAAAGCTTGATTTGATGGATAAAGGAACAAATGCTTTGGAAGTTCTTGAAGGAAGGTCCTATCGACTTCATCACCCTTGGGTTGGAGTTGTCAATCGTTCTCAAGCTGATATCAATAAGAATATTGACATGATTACTGCTCGGCGAAGGGAACGTGAATTTTTTGCTTCTAGTGTTGACTACAGACACTTGGCTGACAAAATGGGGTCAGAGTATCTAGCAAAACTTCTCTCAAAGCACCTAGAGTCTCTGATAAAAACACGTATGCCAGGCATTGCATGCTTGATTAACAAAAGCATAGACGAAATTGAAGCTGAGCTTCATCAGCTTGGGAAGCCTGTTGCAATTGATTCTGGGGCTCATTTACATACTATCCTTGAGCTTTGCCGTGCTTTTGACCTGGTGTTCAAGGATCATCTCCATGGGGGGCGACCTGGTGGTGATCGGATATATAGTGTTTTTGATAATCAGCTCCCTCATGCTCTGAGAAGGCTTCCCTTTGATCACTACCTTTCACTGCAAAATGTGAGGAAGGTGATATCGGAGGCTGATGGATACCAACCTCATCTGATTGCGCCGGAGCATGGTTATCGACGCCTTATTGAAGTTGCAGTCAATTATTTTAGAGGTCCAGCTGAAGCTTCAGTAGATGCTGTTCATTCCATTTTGAAGGAACTTGTTAGAAGATCACTGGCAGAAACTCAGGAGCTGAAGCGCTTTCCCACTCTCCAAGCTGAAGTTTCAAGAGCTGCAAATGAAGCGTTAGAGAGATTTCGAGAAGATAGTAAAACGACAACCTTGCGATTGGTTGACATGGAATCCTCCTACATAACAGTCGATTTCTTTCGAAGGCTCCCACAGGATGATGAAAAGGGAGGAATCCCACCAGCTGCAGCTTCCATAGATAGGTATACGGAGACACATTTCCACCAGATAGCATCAAATATTACCTCTTATATCAGGATGGTGTCTGAGACACTGAGGAACAGTATTCCAAAGTCTGTTGTTCATTGTCAAGTCAGGGAGGCAAAGCGATCGATATTAGATTACTTTTATGTGCAATTGGGACAAATGAAGGGTAATCAACTTGCAGCTCTTCTTAACGAAGATCCTGCTTTGAGGGAAAGGCGACAGCAATGTATCAAAAGGCTTGAACTACATAAATCTGCAAGGGATGAGATTGACTCAGTCTCATGGTCCTGATAAGGACAGGGTCTCGGAGAGTGCCACGTGTAATGACTGTTTCACTCGTTCTCGAGCTGCCCATTACCCTAATTCAGAAGAACAAGGAACGGACCATGGAGCGTGTGGGTATGGAACCTTTGGAGCAACGATCAACGGTGGAGATGTTGCAACTGCATCTGAACTTTACAGAGATGGCCTCGGTTGTGGAGCTTGCTACCAGTGAGTTGTGCTCGGAGGAAGGAGCCATGGTGGTGATAACCGATCAAGGGTCAGGCCCAGGCGACTTTATAATGACCCGAAGAGCCTACGCTCGCTTGGCTCAAACCGCTGATGCTGCTGCTTCTTTGTTAGCCCTCGGTGTTATTGACATTGAATACAAAAGAGTAGCTTGTAGCTATCCGTACAAAAACATAACAATTAAGATTGATGAGGCGAGCGATGCTCCTCATTACTTGGCCTTTGTCATAAGGTTTCAACAAGGCAAAAATGATATCACTGCCGTTCAGCTTTGCGAGACGAAGAACTTCGTGTGCAAGCTACTAGATCGGAGCTACGGTACCGTGTGGACGACGGCGTCGCCGCCGAGGGGACCGTTGTCGTTGCGAATGTTGCTAACGAACGAGGACGGAGACGAGCAGTGGATCGTCCCCATTAACGATATTCCTCGTGATTGGAAGGCTGGAGATATCTATGATACTGGAGTTCAAGTTAATTAAATTCATCGTCTAAATNTTTT

Coding sequence (CDS)

ATGGTCCTGATAAGGACAGGGTCTCGGAGAGTGCCACGTGTAATGACTGTTTCACTCGTTCTCGAGCTGCCCATTACCCTAATTCAGAAGAACAAGGAACGGACCATGGAGCGTGTGGGTATGGAACCTTTGGAGCAACGATCAACGGTGGAGATGTTGCAACTGCATCTGAACTTTACAGAGATGGCCTCGGTTGTGGAGCTTGCTACCAGTGAGTTGTGCTCGGAGGAAGGAGCCATGGTGGTGATAACCGATCAAGGGTCAGGCCCAGGCGACTTTATAATGACCCGAAGAGCCTACGCTCGCTTGGCTCAAACCGCTGATGCTGCTGCTTCTTTGTTAGCCCTCGGTGTTATTGACATTGAATACAAAAGAGTAGCTTGTAGCTATCCGTACAAAAACATAACAATTAAGATTGATGAGGCGAGCGATGCTCCTCATTACTTGGCCTTTGTCATAAGGTTTCAACAAGGCAAAAATGATATCACTGCCGTTCAGCTTTGCGAGACGAAGAACTTCGTGTGCAAGCTACTAGATCGGAGCTACGGTACCGTGTGGACGACGGCGTCGCCGCCGAGGGGACCGTTGTCGTTGCGAATGTTGCTAACGAACGAGGACGGAGACGAGCAGTGGATCGTCCCCATTAACGATATTCCTCGTGATTGGAAGGCTGGAGATATCTATGATACTGGAGTTCAAGTTAATTAA

Protein sequence

MVLIRTGSRRVPRVMTVSLVLELPITLIQKNKERTMERVGMEPLEQRSTVEMLQLHLNFTEMASVVELATSELCSEEGAMVVITDQGSGPGDFIMTRRAYARLAQTADAAASLLALGVIDIEYKRVACSYPYKNITIKIDEASDAPHYLAFVIRFQQGKNDITAVQLCETKNFVCKLLDRSYGTVWTTASPPRGPLSLRMLLTNEDGDEQWIVPINDIPRDWKAGDIYDTGVQVN

Homology

[Close]

BLAST of Cp4.1LG15g03370 vs. ExPASy Swiss-Prot
Match: Q850K7 (Expansin-like B1 OS=Oryza sativa subsp. japonica OX=39947 GN=EXLB1 PE=2 SV=2)

HSP 1 Score: 190.3 bits (482), Expect = 2.5e-47
Identity = 88/164 (53.66%), Postives = 117/164 (71.34%), Query Frame = 0


Query: 74  CSEEGAMVVITDQGSGPG-DFIMTRRAYARLAQTADAAASLLALGVIDIEYKRVACSYPY 133
           CS  G  +VITD G+  G DFI+++ A+ R+AQ+ DA  +LL LGV+ IEY+RV+C+YP 
Sbjct: 90  CSPNGVTIVITDSGASDGTDFILSQHAFTRMAQSTDAGTALLTLGVVGIEYRRVSCTYPN 149

Query: 134 KNITIKIDEASDAPHYLAFVIRFQQGKNDITAVQLCETKNFVCKLLDRSYGTVWTTASPP 193
           KNI  KI E+S+ P+YL F I +QQG  DI AVQLCET N  C+LL R++G VW   SPP
Sbjct: 150 KNIVFKITESSNFPNYLEFEIWYQQGNQDIIAVQLCETVNLTCQLLSRTHGAVWAAVSPP 209

Query: 194 RGPLSLRMLLTN--EDGDEQWIVPINDIPRDWKAGDIYDTGVQV 235
            GPLS+RML ++    G + W+VP N +P++W AG  YD+GVQV
Sbjct: 210 SGPLSIRMLFSSGAPRGGDTWLVPTNIVPQNWTAGATYDSGVQV 253

[Close]

BLAST of Cp4.1LG15g03370 vs. ExPASy Swiss-Prot
Match: Q10S70 (Expansin-like A1 OS=Oryza sativa subsp. japonica OX=39947 GN=EXLA1 PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.2e-27
Identity = 61/171 (35.67%), Postives = 103/171 (60.23%), Query Frame = 0


Query: 66  VELATSELCSEEGAMVVITDQG-SGPGDFIMTRRAYARLAQTADAAASLLALGVIDIEYK 125
           V     +LCS  GA VV+TD+  +     +++  A+A +A+    AASL  L  +D+EYK
Sbjct: 94  VRCKDKKLCSNAGARVVVTDRARTNRTGLVLSSPAFAAMARPG-MAASLTELAAVDVEYK 153

Query: 126 RVACSYPYKNITIKIDEASDAPHYLAFVIRFQQGKNDITAVQLCETKNFVCKLLDRSYGT 185
           RV C Y ++++++++DE S  P+ L     +Q G+ DI AV + +  +   K + R +G 
Sbjct: 154 RVPCEYRHRSLSVRVDERSRGPNELTISFLYQGGQTDIVAVDVAQVGSSSWKFMTREHGP 213

Query: 186 VWTTASPPRGPLSLRMLLTNEDGDEQWIVPINDI-PRDWKAGDIYDTGVQV 235
            W+ A+ P GPL +R+++T    D +W+    ++ PR W+AG++YDTGVQ+
Sbjct: 214 SWSMANAPPGPLQMRLVVTG-GYDGKWVWADREVLPRRWRAGEVYDTGVQI 262

[Close]

BLAST of Cp4.1LG15g03370 vs. ExPASy Swiss-Prot
Match: O23547 (Expansin-like B1 OS=Arabidopsis thaliana OX=3702 GN=EXLB1 PE=2 SV=2)

HSP 1 Score: 123.2 bits (308), Expect = 3.8e-27
Identity = 66/160 (41.25%), Postives = 92/160 (57.50%), Query Frame = 0


Query: 74  CSEEGAMVVITDQGSGPG-DFIMTRRAYARLAQTADAAASLLALGVIDIEYKRVACSYPY 133
           CSEEG  VV TD G G G DFI++ +AY R+A+       L + GV+++EY+R+ C Y  
Sbjct: 90  CSEEGVYVVATDSGEGDGTDFILSPKAYGRMARPG-TENQLYSFGVVNVEYQRIPCRYAG 149

Query: 134 KNITIKIDEASDAPHYLAFVIRFQQGKNDITAVQLCETKNFVCKLLDRSYGTVWTTASPP 193
            N+  KI E S  PHYLA ++ +  G NDI AV++ +      + + R +G V    +PP
Sbjct: 150 YNLVYKIHEKSYNPHYLAILVLYVGGVNDILAVEVWQEDCKEWRRMRRVFGAVHDLQNPP 209

Query: 194 RGPLSLRMLLTNEDGDEQWIVPINDIPRDWKAGDIYDTGV 233
           RG L+LR L+    G   WI   N IP DW AG  YD+ +
Sbjct: 210 RGTLTLRFLVYGSAG-INWIQSPNAIPADWTAGATYDSNI 247

[Close]

BLAST of Cp4.1LG15g03370 vs. ExPASy Swiss-Prot
Match: Q7XCL0 (Expansin-like A2 OS=Oryza sativa subsp. japonica OX=39947 GN=EXLA2 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 6.0e-25
Identity = 63/173 (36.42%), Postives = 95/173 (54.91%), Query Frame = 0


Query: 66  VELATSELCSEEGAMVVITDQGSGPG--DFIMTRRAYARLAQTADAAASLLALGVIDIEY 125
           V     +LCS  GA VV+TD+       D +++  AYA +A+    AA L     +D+EY
Sbjct: 88  VRCKDGKLCSTAGAKVVVTDEARSTNRTDLVLSAAAYAAMARPG-MAAQLRTRRAVDVEY 147

Query: 126 KRVACSYPY-KNITIKIDEASDAPHYLAFVIRFQQGKNDITAVQLCETKNFVCKLLDRSY 185
           KRV C Y   +N++I+++E S  P  L+    +Q G+ DI AV +    +   K + R Y
Sbjct: 148 KRVPCEYAAGRNLSIRVEEKSRPPRELSIRFLYQGGQTDIVAVDVATVGSSNWKFMTRDY 207

Query: 186 GTVWTTASPPRGPLSLRMLLTNEDGDEQWIVPINDI-PRDWKAGDIYDTGVQV 235
           G  W+TA  P GPL  R+++T    D +W+    ++ PR W AG +YD GVQ+
Sbjct: 208 GPAWSTAQAPAGPLQFRVVVTG-GYDGKWVWADGEVLPRRWTAGRVYDAGVQI 258

[Close]

BLAST of Cp4.1LG15g03370 vs. ExPASy Swiss-Prot
Match: Q9SVE5 (Expansin-like A2 OS=Arabidopsis thaliana OX=3702 GN=EXLA2 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.0e-24
Identity = 56/165 (33.94%), Postives = 94/165 (56.97%), Query Frame = 0


Query: 73  LCSEEGAMVVITD-QGSGPGDFIMTRRAYARLAQ-TADAAASLLALGVIDIEYKRVACSY 132
           LCS +G  V++TD   +   D +++ RA+  +A+    A   LL  G++DIEY+RV C Y
Sbjct: 86  LCSSKGTTVIVTDLNKTNQTDLVLSSRAFRAMAKPVVGADRDLLKQGIVDIEYRRVPCDY 145

Query: 133 PYKNITIKIDEASDAPHYLAFVIRFQQGKNDITAVQLCETKNFVCKLLDRSYGTVWTTAS 192
             K + ++++E+S  P+YLA  + +Q G+ ++ A+ + +  +     + RS+G VW T  
Sbjct: 146 GNKKMNVRVEESSKNPNYLAIKLLYQGGQTEVVAIYIAQVGSSHWSYMTRSHGAVWVTDK 205

Query: 193 PPRGPLSLRMLLT-NEDGDEQWIVPINDIPRDWKAGDIYDTGVQV 235
            P G L  R ++T   DG   W   +  +P +W+AG  YD GVQ+
Sbjct: 206 VPNGALQFRFVVTAGYDGKMVWSQRV--LPANWEAGKSYDAGVQI 248

[Close]

BLAST of Cp4.1LG15g03370 vs. NCBI nr
Match: XP_023554242.1 (expansin-like B1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 336 bits (862), Expect = 7.13e-114
Identity = 165/170 (97.06%), Postives = 166/170 (97.65%), Query Frame = 0


Query: 66  VELATSELCSEEGAMVVITDQGSGPGDFIMTRRAYARLAQTADAAASLLALGVIDIEYKR 125
           +    SELCSEEGAMVVITDQGSGPGDFIMTRRAYARLAQTADAAASLLALGVIDIEYKR
Sbjct: 86  IRCVDSELCSEEGAMVVITDQGSGPGDFIMTRRAYARLAQTADAAASLLALGVIDIEYKR 145

Query: 126 VACSYPYKNITIKIDEASDAPHYLAFVIRFQQGKNDITAVQLCETKNFVCKLLDRSYGTV 185
           VACSYPYKNITIKIDEASDAPHYLAFVIRFQQGKNDITAVQLCETKNFVCKLLDRSYGTV
Sbjct: 146 VACSYPYKNITIKIDEASDAPHYLAFVIRFQQGKNDITAVQLCETKNFVCKLLDRSYGTV 205

Query: 186 WTTASPPRGPLSLRMLLTNEDGDEQWIVPINDIPRDWKAGDIYDTGVQVN 235
           WTTASPPRGPLSLRMLLTNEDGDEQWIVPINDIPRDWKAGDIYDTGVQVN
Sbjct: 206 WTTASPPRGPLSLRMLLTNEDGDEQWIVPINDIPRDWKAGDIYDTGVQVN 255

[Close]

BLAST of Cp4.1LG15g03370 vs. NCBI nr
Match: XP_022952067.1 (expansin-like B1 [Cucurbita moschata])

HSP 1 Score: 334 bits (856), Expect = 5.83e-113
Identity = 163/170 (95.88%), Postives = 166/170 (97.65%), Query Frame = 0


Query: 66  VELATSELCSEEGAMVVITDQGSGPGDFIMTRRAYARLAQTADAAASLLALGVIDIEYKR 125
           +    SELCSEEGAMVVITDQGSGPGDFIMTRRAYARLAQTADAAASLLALGVIDIEYKR
Sbjct: 86  IRCVDSELCSEEGAMVVITDQGSGPGDFIMTRRAYARLAQTADAAASLLALGVIDIEYKR 145

Query: 126 VACSYPYKNITIKIDEASDAPHYLAFVIRFQQGKNDITAVQLCETKNFVCKLLDRSYGTV 185
           +ACSYPYKNITIKIDEAS+APHYLAFVIRFQQGKNDITAVQLCETKNFVCKLLDRSYGTV
Sbjct: 146 IACSYPYKNITIKIDEASNAPHYLAFVIRFQQGKNDITAVQLCETKNFVCKLLDRSYGTV 205

Query: 186 WTTASPPRGPLSLRMLLTNEDGDEQWIVPINDIPRDWKAGDIYDTGVQVN 235
           WTTASPPRGPLSLRMLLTNEDGDEQWIVPINDIPRDWKAGDIYDTGVQVN
Sbjct: 206 WTTASPPRGPLSLRMLLTNEDGDEQWIVPINDIPRDWKAGDIYDTGVQVN 255

[Close]

BLAST of Cp4.1LG15g03370 vs. NCBI nr
Match: KAG7011513.1 (Expansin-like B1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 334 bits (856), Expect = 5.83e-113
Identity = 163/170 (95.88%), Postives = 166/170 (97.65%), Query Frame = 0


Query: 66  VELATSELCSEEGAMVVITDQGSGPGDFIMTRRAYARLAQTADAAASLLALGVIDIEYKR 125
           +    SELCSEEGAMVVITDQGSGPGDFIMTRRAYARLAQTADAAASLLALGVIDIEYKR
Sbjct: 86  IRCVDSELCSEEGAMVVITDQGSGPGDFIMTRRAYARLAQTADAAASLLALGVIDIEYKR 145

Query: 126 VACSYPYKNITIKIDEASDAPHYLAFVIRFQQGKNDITAVQLCETKNFVCKLLDRSYGTV 185
           +ACSYPYKNITIKIDEAS+APHYLAFVIRFQQGKNDITAVQLCETKNFVCKLLDRSYGTV
Sbjct: 146 IACSYPYKNITIKIDEASNAPHYLAFVIRFQQGKNDITAVQLCETKNFVCKLLDRSYGTV 205

Query: 186 WTTASPPRGPLSLRMLLTNEDGDEQWIVPINDIPRDWKAGDIYDTGVQVN 235
           WTTASPPRGPLSLRMLLTNEDGDEQWIVPINDIPRDWKAGDIYDTGVQVN
Sbjct: 206 WTTASPPRGPLSLRMLLTNEDGDEQWIVPINDIPRDWKAGDIYDTGVQVN 255

[Close]

BLAST of Cp4.1LG15g03370 vs. NCBI nr
Match: KAG6571823.1 (Expansin-like B1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 332 bits (852), Expect = 2.37e-112
Identity = 162/170 (95.29%), Postives = 165/170 (97.06%), Query Frame = 0


Query: 66  VELATSELCSEEGAMVVITDQGSGPGDFIMTRRAYARLAQTADAAASLLALGVIDIEYKR 125
           +    SELCSEEGAMVVITDQGSGPGDFIMTRRAYARLAQTADAAASLLALGVIDIEYKR
Sbjct: 86  IRCVDSELCSEEGAMVVITDQGSGPGDFIMTRRAYARLAQTADAAASLLALGVIDIEYKR 145

Query: 126 VACSYPYKNITIKIDEASDAPHYLAFVIRFQQGKNDITAVQLCETKNFVCKLLDRSYGTV 185
           +ACSYPYKNITIKIDEAS+APHYLAFVIRFQQGKNDIT VQLCETKNFVCKLLDRSYGTV
Sbjct: 146 IACSYPYKNITIKIDEASNAPHYLAFVIRFQQGKNDITVVQLCETKNFVCKLLDRSYGTV 205

Query: 186 WTTASPPRGPLSLRMLLTNEDGDEQWIVPINDIPRDWKAGDIYDTGVQVN 235
           WTTASPPRGPLSLRMLLTNEDGDEQWIVPINDIPRDWKAGDIYDTGVQVN
Sbjct: 206 WTTASPPRGPLSLRMLLTNEDGDEQWIVPINDIPRDWKAGDIYDTGVQVN 255

[Close]

BLAST of Cp4.1LG15g03370 vs. NCBI nr
Match: XP_022971994.1 (expansin-like B1 [Cucurbita maxima])

HSP 1 Score: 330 bits (846), Expect = 1.94e-111
Identity = 162/170 (95.29%), Postives = 164/170 (96.47%), Query Frame = 0


Query: 66  VELATSELCSEEGAMVVITDQGSGPGDFIMTRRAYARLAQTADAAASLLALGVIDIEYKR 125
           +    SELCSEEGAMVVITDQGSGPGDFIMTRRAY  LAQTADAAASLLALGVIDIEYKR
Sbjct: 86  IRCVDSELCSEEGAMVVITDQGSGPGDFIMTRRAYVGLAQTADAAASLLALGVIDIEYKR 145

Query: 126 VACSYPYKNITIKIDEASDAPHYLAFVIRFQQGKNDITAVQLCETKNFVCKLLDRSYGTV 185
           VACSYPYKNITIKIDEAS+APHYLAFVIRFQQGKNDITAVQLCETKNFVCKLLDRSYGTV
Sbjct: 146 VACSYPYKNITIKIDEASNAPHYLAFVIRFQQGKNDITAVQLCETKNFVCKLLDRSYGTV 205

Query: 186 WTTASPPRGPLSLRMLLTNEDGDEQWIVPINDIPRDWKAGDIYDTGVQVN 235
           WTTASPPRGPLSLRMLLTNEDGDEQWIVPINDIPRDWKAGDIYDTGVQVN
Sbjct: 206 WTTASPPRGPLSLRMLLTNEDGDEQWIVPINDIPRDWKAGDIYDTGVQVN 255

[Close]

BLAST of Cp4.1LG15g03370 vs. ExPASy TrEMBL
Match: A0A6J1GJE5 (expansin-like B1 OS=Cucurbita moschata OX=3662 GN=LOC111454830 PE=3 SV=1)

HSP 1 Score: 334 bits (856), Expect = 2.82e-113
Identity = 163/170 (95.88%), Postives = 166/170 (97.65%), Query Frame = 0


Query: 66  VELATSELCSEEGAMVVITDQGSGPGDFIMTRRAYARLAQTADAAASLLALGVIDIEYKR 125
           +    SELCSEEGAMVVITDQGSGPGDFIMTRRAYARLAQTADAAASLLALGVIDIEYKR
Sbjct: 86  IRCVDSELCSEEGAMVVITDQGSGPGDFIMTRRAYARLAQTADAAASLLALGVIDIEYKR 145

Query: 126 VACSYPYKNITIKIDEASDAPHYLAFVIRFQQGKNDITAVQLCETKNFVCKLLDRSYGTV 185
           +ACSYPYKNITIKIDEAS+APHYLAFVIRFQQGKNDITAVQLCETKNFVCKLLDRSYGTV
Sbjct: 146 IACSYPYKNITIKIDEASNAPHYLAFVIRFQQGKNDITAVQLCETKNFVCKLLDRSYGTV 205

Query: 186 WTTASPPRGPLSLRMLLTNEDGDEQWIVPINDIPRDWKAGDIYDTGVQVN 235
           WTTASPPRGPLSLRMLLTNEDGDEQWIVPINDIPRDWKAGDIYDTGVQVN
Sbjct: 206 WTTASPPRGPLSLRMLLTNEDGDEQWIVPINDIPRDWKAGDIYDTGVQVN 255

[Close]

BLAST of Cp4.1LG15g03370 vs. ExPASy TrEMBL
Match: A0A6J1IA62 (expansin-like B1 OS=Cucurbita maxima OX=3661 GN=LOC111470646 PE=3 SV=1)

HSP 1 Score: 330 bits (846), Expect = 9.38e-112
Identity = 162/170 (95.29%), Postives = 164/170 (96.47%), Query Frame = 0


Query: 66  VELATSELCSEEGAMVVITDQGSGPGDFIMTRRAYARLAQTADAAASLLALGVIDIEYKR 125
           +    SELCSEEGAMVVITDQGSGPGDFIMTRRAY  LAQTADAAASLLALGVIDIEYKR
Sbjct: 86  IRCVDSELCSEEGAMVVITDQGSGPGDFIMTRRAYVGLAQTADAAASLLALGVIDIEYKR 145

Query: 126 VACSYPYKNITIKIDEASDAPHYLAFVIRFQQGKNDITAVQLCETKNFVCKLLDRSYGTV 185
           VACSYPYKNITIKIDEAS+APHYLAFVIRFQQGKNDITAVQLCETKNFVCKLLDRSYGTV
Sbjct: 146 VACSYPYKNITIKIDEASNAPHYLAFVIRFQQGKNDITAVQLCETKNFVCKLLDRSYGTV 205

Query: 186 WTTASPPRGPLSLRMLLTNEDGDEQWIVPINDIPRDWKAGDIYDTGVQVN 235
           WTTASPPRGPLSLRMLLTNEDGDEQWIVPINDIPRDWKAGDIYDTGVQVN
Sbjct: 206 WTTASPPRGPLSLRMLLTNEDGDEQWIVPINDIPRDWKAGDIYDTGVQVN 255

[Close]

BLAST of Cp4.1LG15g03370 vs. ExPASy TrEMBL
Match: A0A5A7TAB6 (Expansin-like B1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004070 PE=3 SV=1)

HSP 1 Score: 312 bits (799), Expect = 7.11e-105
Identity = 153/165 (92.73%), Postives = 157/165 (95.15%), Query Frame = 0


Query: 71  SELCSEEGAMVVITDQGSGPGDFIMTRRAYARLAQTADAAASLLALGVIDIEYKRVACSY 130
           SELCSE+G MVVITDQGSGPGDFIM+RRAYA LAQT  AA SL+ALGVIDIEYKRVACSY
Sbjct: 73  SELCSEKGTMVVITDQGSGPGDFIMSRRAYAGLAQTPYAAVSLMALGVIDIEYKRVACSY 132

Query: 131 PYKNITIKIDEASDAPHYLAFVIRFQQGKNDITAVQLCETKNFVCKLLDRSYGTVWTTAS 190
           P KNITIKIDE SDAPHYLAFVIRFQQGKNDITAVQLCETKNFVCKLLDRSYGTVWTT S
Sbjct: 133 PNKNITIKIDENSDAPHYLAFVIRFQQGKNDITAVQLCETKNFVCKLLDRSYGTVWTTTS 192

Query: 191 PPRGPLSLRMLLTNEDGDEQWIVPINDIPRDWKAGDIYDTGVQVN 235
           PPRGPLSLRMLLTNE+GDEQWIVPINDIPRDWKAGDIYDTGVQVN
Sbjct: 193 PPRGPLSLRMLLTNEEGDEQWIVPINDIPRDWKAGDIYDTGVQVN 237

[Close]

BLAST of Cp4.1LG15g03370 vs. ExPASy TrEMBL
Match: A0A1S4E6D3 (Expansin B1-like protein OS=Cucumis melo OX=3656 GN=LOC103503501 PE=2 SV=1)

HSP 1 Score: 312 bits (799), Expect = 1.32e-104
Identity = 153/165 (92.73%), Postives = 157/165 (95.15%), Query Frame = 0


Query: 71  SELCSEEGAMVVITDQGSGPGDFIMTRRAYARLAQTADAAASLLALGVIDIEYKRVACSY 130
           SELCSE+G MVVITDQGSGPGDFIM+RRAYA LAQT  AA SL+ALGVIDIEYKRVACSY
Sbjct: 91  SELCSEKGTMVVITDQGSGPGDFIMSRRAYAGLAQTPYAAVSLMALGVIDIEYKRVACSY 150

Query: 131 PYKNITIKIDEASDAPHYLAFVIRFQQGKNDITAVQLCETKNFVCKLLDRSYGTVWTTAS 190
           P KNITIKIDE SDAPHYLAFVIRFQQGKNDITAVQLCETKNFVCKLLDRSYGTVWTT S
Sbjct: 151 PNKNITIKIDENSDAPHYLAFVIRFQQGKNDITAVQLCETKNFVCKLLDRSYGTVWTTTS 210

Query: 191 PPRGPLSLRMLLTNEDGDEQWIVPINDIPRDWKAGDIYDTGVQVN 235
           PPRGPLSLRMLLTNE+GDEQWIVPINDIPRDWKAGDIYDTGVQVN
Sbjct: 211 PPRGPLSLRMLLTNEEGDEQWIVPINDIPRDWKAGDIYDTGVQVN 255

[Close]

BLAST of Cp4.1LG15g03370 vs. ExPASy TrEMBL
Match: A0A0A0LEH3 (Major pollen allergen Ory s 1 OS=Cucumis sativus OX=3659 GN=Csa_3G910670 PE=4 SV=1)

HSP 1 Score: 311 bits (798), Expect = 1.87e-104
Identity = 153/165 (92.73%), Postives = 158/165 (95.76%), Query Frame = 0


Query: 71  SELCSEEGAMVVITDQGSGPGDFIMTRRAYARLAQTADAAASLLALGVIDIEYKRVACSY 130
           SELCSE+G MVVITDQGSGPGDFIM+RRAYA LAQT  AA SL+ALGVIDIEYKRVACSY
Sbjct: 91  SELCSEKGTMVVITDQGSGPGDFIMSRRAYAGLAQTPYAAVSLMALGVIDIEYKRVACSY 150

Query: 131 PYKNITIKIDEASDAPHYLAFVIRFQQGKNDITAVQLCETKNFVCKLLDRSYGTVWTTAS 190
           P KNITIKIDE S+APHYLAFVIRFQQGKNDITAVQLCETKNFVCKLLDRSYGTVWTTAS
Sbjct: 151 PNKNITIKIDENSNAPHYLAFVIRFQQGKNDITAVQLCETKNFVCKLLDRSYGTVWTTAS 210

Query: 191 PPRGPLSLRMLLTNEDGDEQWIVPINDIPRDWKAGDIYDTGVQVN 235
           PPRGPLSLRMLLTNE+GDEQWIVPINDIPRDWKAGDIYDTGVQVN
Sbjct: 211 PPRGPLSLRMLLTNEEGDEQWIVPINDIPRDWKAGDIYDTGVQVN 255

[Close]

BLAST of Cp4.1LG15g03370 vs. TAIR 10
Match: AT4G17030.1 (expansin-like B1 )

HSP 1 Score: 123.2 bits (308), Expect = 2.7e-28
Identity = 66/160 (41.25%), Postives = 92/160 (57.50%), Query Frame = 0


Query: 74  CSEEGAMVVITDQGSGPG-DFIMTRRAYARLAQTADAAASLLALGVIDIEYKRVACSYPY 133
           CSEEG  VV TD G G G DFI++ +AY R+A+       L + GV+++EY+R+ C Y  
Sbjct: 90  CSEEGVYVVATDSGEGDGTDFILSPKAYGRMARPG-TENQLYSFGVVNVEYQRIPCRYAG 149

Query: 134 KNITIKIDEASDAPHYLAFVIRFQQGKNDITAVQLCETKNFVCKLLDRSYGTVWTTASPP 193
            N+  KI E S  PHYLA ++ +  G NDI AV++ +      + + R +G V    +PP
Sbjct: 150 YNLVYKIHEKSYNPHYLAILVLYVGGVNDILAVEVWQEDCKEWRRMRRVFGAVHDLQNPP 209

Query: 194 RGPLSLRMLLTNEDGDEQWIVPINDIPRDWKAGDIYDTGV 233
           RG L+LR L+    G   WI   N IP DW AG  YD+ +
Sbjct: 210 RGTLTLRFLVYGSAG-INWIQSPNAIPADWTAGATYDSNI 247

[Close]

BLAST of Cp4.1LG15g03370 vs. TAIR 10
Match: AT4G38400.1 (expansin-like A2 )

HSP 1 Score: 115.2 bits (287), Expect = 7.3e-26
Identity = 56/165 (33.94%), Postives = 94/165 (56.97%), Query Frame = 0


Query: 73  LCSEEGAMVVITD-QGSGPGDFIMTRRAYARLAQ-TADAAASLLALGVIDIEYKRVACSY 132
           LCS +G  V++TD   +   D +++ RA+  +A+    A   LL  G++DIEY+RV C Y
Sbjct: 86  LCSSKGTTVIVTDLNKTNQTDLVLSSRAFRAMAKPVVGADRDLLKQGIVDIEYRRVPCDY 145

Query: 133 PYKNITIKIDEASDAPHYLAFVIRFQQGKNDITAVQLCETKNFVCKLLDRSYGTVWTTAS 192
             K + ++++E+S  P+YLA  + +Q G+ ++ A+ + +  +     + RS+G VW T  
Sbjct: 146 GNKKMNVRVEESSKNPNYLAIKLLYQGGQTEVVAIYIAQVGSSHWSYMTRSHGAVWVTDK 205

Query: 193 PPRGPLSLRMLLT-NEDGDEQWIVPINDIPRDWKAGDIYDTGVQV 235
            P G L  R ++T   DG   W   +  +P +W+AG  YD GVQ+
Sbjct: 206 VPNGALQFRFVVTAGYDGKMVWSQRV--LPANWEAGKSYDAGVQI 248

[Close]

BLAST of Cp4.1LG15g03370 vs. TAIR 10
Match: AT3G45970.1 (expansin-like A1 )

HSP 1 Score: 113.2 bits (282), Expect = 2.8e-25
Identity = 59/173 (34.10%), Postives = 98/173 (56.65%), Query Frame = 0


Query: 66  VELATSELCSEEGAMVVITD-QGSGPGDFIMTRRAYARLAQ-TADAAASLLALGVIDIEY 125
           V     +LCS +G +V+ITD   S   D +++ RA+  +A+    A   LL  G++DIEY
Sbjct: 78  VRCKNPKLCSTKGTIVMITDLNKSNQTDLVLSSRAFRAMAKPIVGADKDLLKQGIVDIEY 137

Query: 126 KRVACSYPYKNITIKIDEASDAPHYLAFVIRFQQGKNDITAVQLCETKNFV-CKLLDRSY 185
           +RV C Y  KN+ ++++EAS  P+YL   + +Q G+ ++ ++ + +  +      + RS+
Sbjct: 138 QRVPCDYGNKNMNVRVEEASKKPNYLEIKLLYQGGQTEVVSIDIAQVGSSPNWGYMTRSH 197

Query: 186 GTVWTTASPPRGPLSLRMLLT-NEDGDEQWIVPINDIPRDWKAGDIYDTGVQV 235
           G VW T   P G +  R ++T   DG   W   +  +P +W+AG IYD GVQ+
Sbjct: 198 GAVWVTDKVPTGAIQFRFVVTGGYDGKMIWSQSV--LPSNWEAGKIYDAGVQI 248

[Close]

BLAST of Cp4.1LG15g03370 vs. TAIR 10
Match: AT3G45960.1 (expansin-like A3 )

HSP 1 Score: 112.8 bits (281), Expect = 3.6e-25
Identity = 54/172 (31.40%), Postives = 95/172 (55.23%), Query Frame = 0


Query: 66  VELATSELCSEEGAMVVITD-QGSGPGDFIMTRRAYARLAQ-TADAAASLLALGVIDIEY 125
           V     +LC+ +G +V++TD   S   D +++ RA+  +A+        LL  G++D+EY
Sbjct: 30  VRCKNPKLCNSKGTIVMVTDLNTSNQTDLVLSSRAFRAMAKPVVGVDKYLLKQGIVDVEY 89

Query: 126 KRVACSYPYKNITIKIDEASDAPHYLAFVIRFQQGKNDITAVQLCETKNFVCKLLDRSYG 185
           +RV C+Y  +N+ ++++EAS  P+YLA  + +Q G+ ++  + +    +     + RS+G
Sbjct: 90  QRVPCNYGKRNLNVRVEEASKKPNYLAIKLLYQGGQTEVVGIDIAPVGSSQWSYMSRSHG 149

Query: 186 TVWTTASPPRGPLSLRMLLT-NEDGDEQWIVPINDIPRDWKAGDIYDTGVQV 235
            VW T   P G L  +  +T   DG   W   +  +P +W +G IYD GVQ+
Sbjct: 150 AVWATDKVPTGALQFKFTVTGGYDGKTVWSKRV--LPANWNSGRIYDAGVQI 199

[Close]

BLAST of Cp4.1LG15g03370 vs. TAIR 10
Match: AT3G45960.2 (expansin-like A3 )

HSP 1 Score: 112.8 bits (281), Expect = 3.6e-25
Identity = 54/172 (31.40%), Postives = 95/172 (55.23%), Query Frame = 0


Query: 66  VELATSELCSEEGAMVVITD-QGSGPGDFIMTRRAYARLAQ-TADAAASLLALGVIDIEY 125
           V     +LC+ +G +V++TD   S   D +++ RA+  +A+        LL  G++D+EY
Sbjct: 78  VRCKNPKLCNSKGTIVMVTDLNTSNQTDLVLSSRAFRAMAKPVVGVDKYLLKQGIVDVEY 137

Query: 126 KRVACSYPYKNITIKIDEASDAPHYLAFVIRFQQGKNDITAVQLCETKNFVCKLLDRSYG 185
           +RV C+Y  +N+ ++++EAS  P+YLA  + +Q G+ ++  + +    +     + RS+G
Sbjct: 138 QRVPCNYGKRNLNVRVEEASKKPNYLAIKLLYQGGQTEVVGIDIAPVGSSQWSYMSRSHG 197

Query: 186 TVWTTASPPRGPLSLRMLLT-NEDGDEQWIVPINDIPRDWKAGDIYDTGVQV 235
            VW T   P G L  +  +T   DG   W   +  +P +W +G IYD GVQ+
Sbjct: 198 AVWATDKVPTGALQFKFTVTGGYDGKTVWSKRV--LPANWNSGRIYDAGVQI 247

The following BLAST results are available for this feature:

BLAST of Cp4.1LG15g03370 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q850K7	2.5e-47	53.66	Expansin-like B1 OS=Oryza sativa subsp. japonica OX=39947 GN=EXLB1 PE=2 SV=2	[more]
Q10S70	2.2e-27	35.67	Expansin-like A1 OS=Oryza sativa subsp. japonica OX=39947 GN=EXLA1 PE=2 SV=1	[more]
O23547	3.8e-27	41.25	Expansin-like B1 OS=Arabidopsis thaliana OX=3702 GN=EXLB1 PE=2 SV=2	[more]
Q7XCL0	6.0e-25	36.42	Expansin-like A2 OS=Oryza sativa subsp. japonica OX=39947 GN=EXLA2 PE=2 SV=1	[more]
Q9SVE5	1.0e-24	33.94	Expansin-like A2 OS=Arabidopsis thaliana OX=3702 GN=EXLA2 PE=2 SV=1	[more]

BLAST of Cp4.1LG15g03370 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023554242.1	7.13e-114	97.06	expansin-like B1 [Cucurbita pepo subsp. pepo]	[more]
XP_022952067.1	5.83e-113	95.88	expansin-like B1 [Cucurbita moschata]	[more]
KAG7011513.1	5.83e-113	95.88	Expansin-like B1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6571823.1	2.37e-112	95.29	Expansin-like B1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022971994.1	1.94e-111	95.29	expansin-like B1 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG15g03370 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GJE5	2.82e-113	95.88	expansin-like B1 OS=Cucurbita moschata OX=3662 GN=LOC111454830 PE=3 SV=1	[more]
A0A6J1IA62	9.38e-112	95.29	expansin-like B1 OS=Cucurbita maxima OX=3661 GN=LOC111470646 PE=3 SV=1	[more]
A0A5A7TAB6	7.11e-105	92.73	Expansin-like B1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004...	[more]
A0A1S4E6D3	1.32e-104	92.73	Expansin B1-like protein OS=Cucumis melo OX=3656 GN=LOC103503501 PE=2 SV=1	[more]
A0A0A0LEH3	1.87e-104	92.73	Major pollen allergen Ory s 1 OS=Cucumis sativus OX=3659 GN=Csa_3G910670 PE=4 SV...	[more]

BLAST of Cp4.1LG15g03370 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17030.1	2.7e-28	41.25	expansin-like B1	[more]
AT4G38400.1	7.3e-26	33.94	expansin-like A2	[more]
AT3G45970.1	2.8e-25	34.10	expansin-like A1	[more]
AT3G45960.1	3.6e-25	31.40	expansin-like A3	[more]
AT3G45960.2	3.6e-25	31.40	expansin-like A3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007117	Expansin, cellulose-binding-like domain	PFAM	PF01357	Expansin_C	coord: 135..216 e-value: 1.7E-12 score: 47.2
IPR007117	Expansin, cellulose-binding-like domain	PROSITE	PS50843	EXPANSIN_CBD	coord: 147..230 score: 13.707047
IPR036749	Expansin, cellulose-binding-like domain superfamily	GENE3D	2.60.40.760		coord: 132..234 e-value: 4.8E-28 score: 99.0
IPR036749	Expansin, cellulose-binding-like domain superfamily	SUPERFAMILY	49590	PHL pollen allergen	coord: 133..229
IPR036908	RlpA-like domain superfamily	GENE3D	2.40.40.10		coord: 60..129 e-value: 3.0E-8 score: 35.8
IPR036908	RlpA-like domain superfamily	SUPERFAMILY	50685	Barwin-like endoglucanases	coord: 70..131
None	No IPR available	PANTHER	PTHR31692:SF99	POLLEN ALLERGEN ORY S 1, PUTATIVE-RELATED	coord: 66..235
None	No IPR available	PANTHER	PTHR31692	EXPANSIN-B3	coord: 66..235
IPR007112	Expansin/pollen allergen, DPBB domain	PROSITE	PS50842	EXPANSIN_EG45	coord: 66..133 score: 8.990754

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG15g03370.1	Cp4.1LG15g03370.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005576	extracellular region