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Cp4.1LG15g00870 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGGATTTTGCTTGAAAACTTTACCATTATAACTAACTCCCTATGCATATAAGCATGGCCTGCCAAAAGCTTATATCAACTTATAGGAAATAAACCCCTTTTTCATTCATACCCCAACTATATATATCAATACAACCAAATCTTCCTTCCTTATTAGATACCCATTTCCTTCCCCAAATTGCTCTCTTCTTCTTCATTTCTCTTGAGTTTAATACCCATAATTTTGTTCTTAAGTTCTTAGTTGTTCTTAGCAATGGGGCTTAAAGATATTGGAGCCTCCCTTCCTCCTGGGTTTAGATTCTACCCAAGTGATGAAGAATTGGTTTGTCATTATCTTTACAAAAAGATTATGAATGAACAAGTTCTTAAGGGCACTCTTGTGGAGATTGATTTGCATACTTGTGAGCCATGGCAGCTTCCTGGTAGGCTCTTTTTCCTATGAATCTCAGCTATTTTCGAGGGTTTTTCTTGGATTCATAATGGGTTTTCTTCAATTTGTTCATATGTTTCTTAATCAATTGGTTTGGTTGATGTTTTGTGTGTAAAAAGATGAACTTTTTTGCATGAACTTGTAAAGAACAAAGATTTTCCAATGTTTTTGTGTAGTACGATGTGGTTTTGTATGACAAAAAATTTGTGTTTTTGGTTCTTTGTTTACCTTTCGATGTCATACGAGGTGGTTTTAAGAGGCATTAATTTCATGACAATTGGCTAAATCCCAACCCTTTTACGAGGATCGGATTTTATCTCGACCTCAACCTCGACCTCAACCTCATTCACATTAAATATCCAAAGAATCTCTCTTTCTCTCCTACCCCACGTACAAATACGTGCATTCGTGTAAAAATCTTGTCTTTCAGTGTTTTGTTTCGAGAATATTCCATCAGATGCTTTGATCGTTGAGCTATTTTTAGCGTTTTTTTTCAAGACCGAAGCTCTATTTCGCTCTCGAACTATTAGATAAGGTTTTGTTTAGGGAAGACACGTAGAAGAGAGGGAAAACAATGGATCAAAATTGAGAAACTTTTGGTCCCATAATTGAAGTAATATAATATAAGTTGATGAGTCATAATACCCATTTTCCCACAAGTGCTTGAGCTAGCTTCAACTTGTAGAACAAGCTTCATTAATTATTGATTCATTTCTTCTTTGTTCTTAGTTCTTCACAAAATTATATATCAAATCTATCTTTCATGCAAACAAATCTTGTTTTGTTGTTTATGATCATCATTACATTGCTAATCATACCTTTATGATAGGGCGATTATTGTAATTTAGCGTGAAAAAATACGTTAATTTATTAATTATTTAGTTGATTAATATCTTAATCATAGGCTTCATTAGCCTTAGGCCTTAGTTTCTATTTTATTCGGTAAATTATTCATTACTTCAATAGAATAAGTTCAATCATATATAGTTAATGAAAGCGAAAGATTAATTTAACTAATTAATTCTTTTTTGTTTTTCGGGAATTAAAAGAGGTGGCGAAGCTGAATAGCAACGAGTGGTACTTCTTCAGCTTTCGAGATCGAAAATACGCGACGGGATATCGAACCAATCGTGCGACGACATGTGGATATTGGAAAGCGACTGGGAAAGATCGAACGGTGGTGGATTCGTCAACGGGGGAGATCGTAGGGATGAAAAAGACTTTGGTGTTTTATAGAAACCGAGCTCCAAATGGGATTAAAACGGGATGGATTATGCATGAATTTCGTCTAGAGGCCCCTCATAGGCTCCCAAAGGTTGGATTTTTCATTATTTTTTTTTTTTGCTTTTTAGTCCTTCAATTTGGAAAGAATTATATTCATGTACCCTTAAAGGGTAACAACACAAAAGTTGGTGTCTTTTTCCACTTTGGTCATATTCAATTTAATGAATTTTTCTTGGTTTGCATTAAGAAAGAATATTTATTTTTTAGTCCCTCCAAAGTTCAAAATTAACAAAATGAACCAATTTATGTGAGTGCAGGAGGATTGGGTTTTGTGTAGAGTGTTTCAAAAGGGGAAGCAAGAAGACTACAACAACAAACTCAACCAGCATTTCACGTTCGGAAACTTCGAGCACGTTCCTTCTGTACTCGTCCGAGCTCCATCTCCCCCTCCGAGTGATCCGAGCAAGACTGTGATGCCTTCTAGCTACAATGTCGATATCGATATCGCTTCGTTATCGTCTTCGATAGCTCCCGAACAGATCAGCCATAGCCACACAGGCAGCTGTTCTTTTCTCCATCTCCTTCAGCAGCTTCCTCAAGAGAAACAAGACAATAATCCCAAAACTGATCAACTTTTCTGCCCAAAAAATAATGAATCAGATTATGGGGTTATGTGGGAAATGGATTTGGAAGAACATACCTTTCGAGACGGTGTCGTATCGAACTTGGATCAGATGGAATTCGACGTCGATAGCAGCCAGGTTTTCCTCTGAAAGGGCGATGATATCTGCTACGCTACGCTGTGCTGTTGATATATAGTTTGTAATTAATGTATGGTGCATTTGGACATAGGAGAGTATTGGGGCATTGTTGCTTTGGACACACTTAGATTTCATTCTTTCTTTTAAATCTTTGGTCTTGTTGTAAAGAACATTAGTCAAAGCTGTAATGATATCAGTTAGGCGCATTAATGTGGATGCA GGGATTTTGCTTGAAAACTTTACCATTATAACTAACTCCCTATGCATATAAGCATGGCCTGCCAAAAGCTTATATCAACTTATAGGAAATAAACCCCTTTTTCATTCATACCCCAACTATATATATCAATACAACCAAATCTTCCTTCCTTATTAGATACCCATTTCCTTCCCCAAATTGCTCTCTTCTTCTTCATTTCTCTTGAGTTTAATACCCATAATTTTGTTCTTAAGTTCTTAGTTGTTCTTAGCAATGGGGCTTAAAGATATTGGAGCCTCCCTTCCTCCTGGGTTTAGATTCTACCCAAGTGATGAAGAATTGGTTTGTCATTATCTTTACAAAAAGATTATGAATGAACAAGTTCTTAAGGGCACTCTTGTGGAGATTGATTTGCATACTTGTGAGCCATGGCAGCTTCCTGAGGTGGCGAAGCTGAATAGCAACGAGTGGTACTTCTTCAGCTTTCGAGATCGAAAATACGCGACGGGATATCGAACCAATCGTGCGACGACATGTGGATATTGGAAAGCGACTGGGAAAGATCGAACGGTGGTGGATTCGTCAACGGGGGAGATCGTAGGGATGAAAAAGACTTTGGTGTTTTATAGAAACCGAGCTCCAAATGGGATTAAAACGGGATGGATTATGCATGAATTTCGTCTAGAGGCCCCTCATAGGCTCCCAAAGGAGGATTGGGTTTTGTGTAGAGTGTTTCAAAAGGGGAAGCAAGAAGACTACAACAACAAACTCAACCAGCATTTCACGTTCGGAAACTTCGAGCACGTTCCTTCTGTACTCGTCCGAGCTCCATCTCCCCCTCCGAGTGATCCGAGCAAGACTGTGATGCCTTCTAGCTACAATGTCGATATCGATATCGCTTCGTTATCGTCTTCGATAGCTCCCGAACAGATCAGCCATAGCCACACAGGCAGCTGTTCTTTTCTCCATCTCCTTCAGCAGCTTCCTCAAGAGAAACAAGACAATAATCCCAAAACTGATCAACTTTTCTGCCCAAAAAATAATGAATCAGATTATGGGGTTATGTGGGAAATGGATTTGGAAGAACATACCTTTCGAGACGGTGTCGTATCGAACTTGGATCAGATGGAATTCGACGTCGATAGCAGCCAGGTTTTCCTCTGAAAGGGCGATGATATCTGCTACGCTACGCTGTGCTGTTGATATATAGTTTGTAATTAATGTATGGTGCATTTGGACATAGGAGAGTATTGGGGCATTGTTGCTTTGGACACACTTAGATTTCATTCTTTCTTTTAAATCTTTGGTCTTGTTGTAAAGAACATTAGTCAAAGCTGTAATGATATCAGTTAGGCGCATTAATGTGGATGCA ATGGGGCTTAAAGATATTGGAGCCTCCCTTCCTCCTGGGTTTAGATTCTACCCAAGTGATGAAGAATTGGTTTGTCATTATCTTTACAAAAAGATTATGAATGAACAAGTTCTTAAGGGCACTCTTGTGGAGATTGATTTGCATACTTGTGAGCCATGGCAGCTTCCTGAGGTGGCGAAGCTGAATAGCAACGAGTGGTACTTCTTCAGCTTTCGAGATCGAAAATACGCGACGGGATATCGAACCAATCGTGCGACGACATGTGGATATTGGAAAGCGACTGGGAAAGATCGAACGGTGGTGGATTCGTCAACGGGGGAGATCGTAGGGATGAAAAAGACTTTGGTGTTTTATAGAAACCGAGCTCCAAATGGGATTAAAACGGGATGGATTATGCATGAATTTCGTCTAGAGGCCCCTCATAGGCTCCCAAAGGAGGATTGGGTTTTGTGTAGAGTGTTTCAAAAGGGGAAGCAAGAAGACTACAACAACAAACTCAACCAGCATTTCACGTTCGGAAACTTCGAGCACGTTCCTTCTGTACTCGTCCGAGCTCCATCTCCCCCTCCGAGTGATCCGAGCAAGACTGTGATGCCTTCTAGCTACAATGTCGATATCGATATCGCTTCGTTATCGTCTTCGATAGCTCCCGAACAGATCAGCCATAGCCACACAGGCAGCTGTTCTTTTCTCCATCTCCTTCAGCAGCTTCCTCAAGAGAAACAAGACAATAATCCCAAAACTGATCAACTTTTCTGCCCAAAAAATAATGAATCAGATTATGGGGTTATGTGGGAAATGGATTTGGAAGAACATACCTTTCGAGACGGTGTCGTATCGAACTTGGATCAGATGGAATTCGACGTCGATAGCAGCCAGGTTTTCCTCTGA MGLKDIGASLPPGFRFYPSDEELVCHYLYKKIMNEQVLKGTLVEIDLHTCEPWQLPEVAKLNSNEWYFFSFRDRKYATGYRTNRATTCGYWKATGKDRTVVDSSTGEIVGMKKTLVFYRNRAPNGIKTGWIMHEFRLEAPHRLPKEDWVLCRVFQKGKQEDYNNKLNQHFTFGNFEHVPSVLVRAPSPPPSDPSKTVMPSSYNVDIDIASLSSSIAPEQISHSHTGSCSFLHLLQQLPQEKQDNNPKTDQLFCPKNNESDYGVMWEMDLEEHTFRDGVVSNLDQMEFDVDSSQVFL Homology
BLAST of Cp4.1LG15g00870 vs. ExPASy Swiss-Prot
Match: Q9S851 (Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana OX=3702 GN=NAC031 PE=1 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 7.3e-52 Identity = 91/150 (60.67%), Postives = 112/150 (74.67%), Query Frame = 0
BLAST of Cp4.1LG15g00870 vs. ExPASy Swiss-Prot
Match: Q84TE6 (NAC domain-containing protein 21/22 OS=Arabidopsis thaliana OX=3702 GN=NAC021 PE=1 SV=2) HSP 1 Score: 200.7 bits (509), Expect = 2.4e-50 Identity = 91/162 (56.17%), Postives = 116/162 (71.60%), Query Frame = 0
BLAST of Cp4.1LG15g00870 vs. ExPASy Swiss-Prot
Match: O04017 (Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana OX=3702 GN=NAC098 PE=1 SV=1) HSP 1 Score: 198.7 bits (504), Expect = 8.9e-50 Identity = 105/238 (44.12%), Postives = 135/238 (56.72%), Query Frame = 0
BLAST of Cp4.1LG15g00870 vs. ExPASy Swiss-Prot
Match: Q9FLJ2 (NAC domain-containing protein 100 OS=Arabidopsis thaliana OX=3702 GN=NAC100 PE=2 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 1.5e-49 Identity = 90/153 (58.82%), Postives = 112/153 (73.20%), Query Frame = 0
BLAST of Cp4.1LG15g00870 vs. ExPASy Swiss-Prot
Match: Q9FLR3 (NAC domain-containing protein 79 OS=Arabidopsis thaliana OX=3702 GN=NAC079 PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 8.4e-48 Identity = 97/195 (49.74%), Postives = 129/195 (66.15%), Query Frame = 0
BLAST of Cp4.1LG15g00870 vs. NCBI nr
Match: XP_023554678.1 (protein CUP-SHAPED COTYLEDON 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 619 bits (1597), Expect = 3.77e-224 Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 0
BLAST of Cp4.1LG15g00870 vs. NCBI nr
Match: KAG6571530.1 (Protein CUP-SHAPED COTYLEDON 3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011274.1 Protein CUP-SHAPED COTYLEDON 3, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 617 bits (1591), Expect = 3.10e-223 Identity = 295/296 (99.66%), Postives = 295/296 (99.66%), Query Frame = 0
BLAST of Cp4.1LG15g00870 vs. NCBI nr
Match: XP_022963542.1 (NAC domain-containing protein 21/22-like [Cucurbita moschata]) HSP 1 Score: 615 bits (1587), Expect = 1.26e-222 Identity = 294/296 (99.32%), Postives = 295/296 (99.66%), Query Frame = 0
BLAST of Cp4.1LG15g00870 vs. NCBI nr
Match: XP_022967434.1 (protein CUP-SHAPED COTYLEDON 2-like [Cucurbita maxima]) HSP 1 Score: 611 bits (1576), Expect = 6.01e-221 Identity = 292/296 (98.65%), Postives = 293/296 (98.99%), Query Frame = 0
BLAST of Cp4.1LG15g00870 vs. NCBI nr
Match: XP_038888767.1 (NAC domain-containing protein 21/22-like [Benincasa hispida]) HSP 1 Score: 549 bits (1415), Expect = 2.52e-196 Identity = 269/302 (89.07%), Postives = 282/302 (93.38%), Query Frame = 0
BLAST of Cp4.1LG15g00870 vs. ExPASy TrEMBL
Match: A0A6J1HFI6 (NAC domain-containing protein 21/22-like OS=Cucurbita moschata OX=3662 GN=LOC111463835 PE=4 SV=1) HSP 1 Score: 615 bits (1587), Expect = 6.11e-223 Identity = 294/296 (99.32%), Postives = 295/296 (99.66%), Query Frame = 0
BLAST of Cp4.1LG15g00870 vs. ExPASy TrEMBL
Match: A0A6J1HWP7 (protein CUP-SHAPED COTYLEDON 2-like OS=Cucurbita maxima OX=3661 GN=LOC111466974 PE=4 SV=1) HSP 1 Score: 611 bits (1576), Expect = 2.91e-221 Identity = 292/296 (98.65%), Postives = 293/296 (98.99%), Query Frame = 0
BLAST of Cp4.1LG15g00870 vs. ExPASy TrEMBL
Match: A0A0A0LB56 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G379740 PE=4 SV=1) HSP 1 Score: 530 bits (1364), Expect = 6.47e-189 Identity = 261/303 (86.14%), Postives = 276/303 (91.09%), Query Frame = 0
BLAST of Cp4.1LG15g00870 vs. ExPASy TrEMBL
Match: A0A1S3BIA3 (protein CUP-SHAPED COTYLEDON 3-like OS=Cucumis melo OX=3656 GN=LOC103489866 PE=4 SV=1) HSP 1 Score: 528 bits (1360), Expect = 3.66e-188 Identity = 263/312 (84.29%), Postives = 277/312 (88.78%), Query Frame = 0
BLAST of Cp4.1LG15g00870 vs. ExPASy TrEMBL
Match: A0A6J1EXP5 (NAC domain-containing protein 21/22-like OS=Cucurbita moschata OX=3662 GN=LOC111437436 PE=4 SV=1) HSP 1 Score: 503 bits (1294), Expect = 2.32e-178 Identity = 251/298 (84.23%), Postives = 268/298 (89.93%), Query Frame = 0
BLAST of Cp4.1LG15g00870 vs. TAIR 10
Match: AT4G28530.1 (NAC domain containing protein 74 ) HSP 1 Score: 269.6 bits (688), Expect = 2.9e-72 Identity = 130/189 (68.78%), Postives = 145/189 (76.72%), Query Frame = 0
BLAST of Cp4.1LG15g00870 vs. TAIR 10
Match: AT1G76420.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein ) HSP 1 Score: 205.7 bits (522), Expect = 5.2e-53 Identity = 91/150 (60.67%), Postives = 112/150 (74.67%), Query Frame = 0
BLAST of Cp4.1LG15g00870 vs. TAIR 10
Match: AT2G24430.1 (NAC domain containing protein 38 ) HSP 1 Score: 201.4 bits (511), Expect = 9.8e-52 Identity = 89/151 (58.94%), Postives = 115/151 (76.16%), Query Frame = 0
BLAST of Cp4.1LG15g00870 vs. TAIR 10
Match: AT2G24430.2 (NAC domain containing protein 38 ) HSP 1 Score: 201.4 bits (511), Expect = 9.8e-52 Identity = 89/151 (58.94%), Postives = 115/151 (76.16%), Query Frame = 0
BLAST of Cp4.1LG15g00870 vs. TAIR 10
Match: AT1G56010.2 (NAC domain containing protein 1 ) HSP 1 Score: 200.7 bits (509), Expect = 1.7e-51 Identity = 91/162 (56.17%), Postives = 116/162 (71.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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