Homology
BLAST of Cp4.1LG15g00790 vs. ExPASy Swiss-Prot
Match:
Q56X05 (Pentatricopeptide repeat-containing protein At1g06143 OS=Arabidopsis thaliana OX=3702 GN=EMB1444 PE=2 SV=2)
HSP 1 Score: 377.1 bits (967), Expect = 2.9e-103
Identity = 214/538 (39.78%), Postives = 275/538 (51.12%), Query Frame = 0
Query: 88 IKNCSTINELDGIYASMIKTNATQDCFLVNQFISASLTFNSVDYPVLAFTQMENPNVFVY 147
IK CST L+ A+MIKT+ QDC L+NQFI+A +F +D V TQM+ PNVFVY
Sbjct: 35 IKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVY 94
Query: 148 NAMIRGFVYCGYPFRAIQCYVHMLE----------------------------------- 207
NA+ +GFV C +P R+++ YV ML
Sbjct: 95 NALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQAHIWKFG 154
Query: 208 ------------------------------------------------------------ 267
Sbjct: 155 FGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLAN 214
Query: 268 ------------------------------------------------------------ 327
Sbjct: 215 QMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAV 274
Query: 328 -----------SQVTMSTVVSACAHVGALDLGKEIHHYAMSWGLNLDVYIGSALVDMYAK 387
+VTMSTV+SACAH+G L++GKE+H Y + G LDVYIGSALVDMY+K
Sbjct: 275 FYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSK 334
Query: 388 CGSLDRSLLVFFKLKDKNLYCWNAVIEGLAVHGYAEKALRMFVIMEREKIMPNGVTFISI 447
CGSL+R+LLVFF L KNL+CWN++IEGLA HG+A++AL+MF ME E + PN VTF+S+
Sbjct: 335 CGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSV 394
Query: 448 LSACTHAGLVIEGRSRFSSMIRDYGIRPEVEHYGCMVDMLSKAGLLDEALELINGMEFEP 460
+ACTHAGLV EGR + SMI DY I VEHYG MV + SKAGL+ EALELI MEFEP
Sbjct: 395 FTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEP 454
BLAST of Cp4.1LG15g00790 vs. ExPASy Swiss-Prot
Match:
Q9SY02 (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1)
HSP 1 Score: 282.0 bits (720), Expect = 1.3e-74
Identity = 134/331 (40.48%), Postives = 210/331 (63.44%), Query Frame = 0
Query: 136 FTQMENPNVFVYNAMIRGFVYCGYPFRAIQCYVHMLE-----SQVTMSTVVSACAHVGAL 195
F +M + + AMI G+ G+ F A++ +V M ++ + S+ +S CA V AL
Sbjct: 366 FDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVAL 425
Query: 196 DLGKEIHHYAMSWGLNLDVYIGSALVDMYAKCGSLDRSLLVFFKLKDKNLYCWNAVIEGL 255
+LGK++H + G ++G+AL+ MY KCGS++ + +F ++ K++ WN +I G
Sbjct: 426 ELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGY 485
Query: 256 AVHGYAEKALRMFVIMEREKIMPNGVTFISILSACTHAGLVIEGRSRFSSMIRDYGIRPE 315
+ HG+ E ALR F M+RE + P+ T +++LSAC+H GLV +GR F +M +DYG+ P
Sbjct: 486 SRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPN 545
Query: 316 VEHYGCMVDMLSKAGLLDEALELINGMEFEPNSIIWGALLNGCKLHGNSEIAKDAVRQLT 375
+HY CMVD+L +AGLL++A L+ M FEP++ IWG LL ++HGN+E+A+ A ++
Sbjct: 546 SQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIF 605
Query: 376 ILEPKNSGHYNLLVSMYAEEKHWMEVAHIRAMMKENGVEKKYPGSSWIELEGRIHQFSAS 435
+EP+NSG Y LL ++YA W +V +R M++ GV KK PG SWIE++ + H FS
Sbjct: 606 AMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGV-KKVPGYSWIEIQNKTHTFSVG 665
Query: 436 ADCHPDSDKIYFILTELDGQLKLAGNVLEPS 462
+ HP+ D+I+ L ELD ++K AG V + S
Sbjct: 666 DEFHPEKDEIFAFLEELDLRMKKAGYVSKTS 695
BLAST of Cp4.1LG15g00790 vs. ExPASy Swiss-Prot
Match:
Q9SX45 (Pentatricopeptide repeat-containing protein At1g50270 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E42 PE=2 SV=1)
HSP 1 Score: 273.5 bits (698), Expect = 4.4e-72
Identity = 138/348 (39.66%), Postives = 208/348 (59.77%), Query Frame = 0
Query: 112 DCFLVNQFISASLTFNSVDYPVLAFTQMENPNVFVYNAMIRGFVYCGYPFRAIQCYVHML 171
D F+ + + + D F +M + NV + A+I G+V + + + ML
Sbjct: 239 DVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEML 298
Query: 172 ESQV-----TMSTVVSACAHVGALDLGKEIHHYAMSWGLNLDVYIGSALVDMYAKCGSLD 231
+S V T+S+V+SACAHVGAL G+ +H Y + + ++ G+ L+D+Y KCG L+
Sbjct: 299 KSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLE 358
Query: 232 RSLLVFFKLKDKNLYCWNAVIEGLAVHGYAEKALRMFVIMEREKIMPNGVTFISILSACT 291
++LVF +L +KN+Y W A+I G A HGYA A +F M + PN VTF+++LSAC
Sbjct: 359 EAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACA 418
Query: 292 HAGLVIEGRSRFSSMIRDYGIRPEVEHYGCMVDMLSKAGLLDEALELINGMEFEPNSIIW 351
H GLV EGR F SM + + P+ +HY CMVD+ + GLL+EA LI M EP +++W
Sbjct: 419 HGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVW 478
Query: 352 GALLNGCKLHGNSEIAKDAVRQLTILEPKNSGHYNLLVSMYAEEKHWMEVAHIRAMMKEN 411
GAL C LH + E+ K A ++ L+P +SG Y LL ++Y+E ++W EVA +R MK+
Sbjct: 479 GALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQ 538
Query: 412 GVEKKYPGSSWIELEGRIHQFSASADCHP-DSDKIYFILTELDGQLKL 454
V K PG SWIE++G++ +F A D P +SD +Y L + Q++L
Sbjct: 539 QVVKS-PGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQMRL 585
BLAST of Cp4.1LG15g00790 vs. ExPASy Swiss-Prot
Match:
Q9STF3 (Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR2 PE=2 SV=1)
HSP 1 Score: 270.4 bits (690), Expect = 3.8e-71
Identity = 139/389 (35.73%), Postives = 226/389 (58.10%), Query Frame = 0
Query: 79 TFKQTLLDRIKNCSTINEL---DGIYASMIKTNATQDCFLVNQFISASLTFNSVDYPVLA 138
T+ L + + T+N L I+A + + + +++ + F VDY
Sbjct: 180 TYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYV 239
Query: 139 FTQMENPNVFVYNAMIRGFVYCGYPFRAIQCYVHMLE-------SQVTMSTVVSACAHVG 198
F M NV ++AMI + G F A++ + M+ + VTM +V+ ACA +
Sbjct: 240 FGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLA 299
Query: 199 ALDLGKEIHHYAMSWGLNLDVYIGSALVDMYAKCGSLDRSLLVFFKLKDKNLYCWNAVIE 258
AL+ GK IH Y + GL+ + + SALV MY +CG L+ VF ++ D+++ WN++I
Sbjct: 300 ALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLIS 359
Query: 259 GLAVHGYAEKALRMFVIMEREKIMPNGVTFISILSACTHAGLVIEGRSRFSSMIRDYGIR 318
VHGY +KA+++F M P VTF+S+L AC+H GLV EG+ F +M RD+GI+
Sbjct: 360 SYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIK 419
Query: 319 PEVEHYGCMVDMLSKAGLLDEALELINGMEFEPNSIIWGALLNGCKLHGNSEIAKDAVRQ 378
P++EHY CMVD+L +A LDEA +++ M EP +WG+LL C++HGN E+A+ A R+
Sbjct: 420 PQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRR 479
Query: 379 LTILEPKNSGHYNLLVSMYAEEKHWMEVAHIRAMMKENGVEKKYPGSSWIELEGRIHQFS 438
L LEPKN+G+Y LL +YAE + W EV ++ +++ G++ K PG W+E+ +++ F
Sbjct: 480 LFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQ-KLPGRCWMEVRRKMYSFV 539
Query: 439 ASADCHPDSDKIYFILTELDGQLKLAGNV 458
+ + +P ++I+ L +L +K G +
Sbjct: 540 SVDEFNPLMEQIHAFLVKLAEDMKEKGYI 567
BLAST of Cp4.1LG15g00790 vs. ExPASy Swiss-Prot
Match:
O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)
HSP 1 Score: 268.9 bits (686), Expect = 1.1e-70
Identity = 143/386 (37.05%), Postives = 223/386 (57.77%), Query Frame = 0
Query: 79 TFKQTLLDRIKNCSTINELDGIYASM-IKTNATQDCFLVNQFISASLTFNSVDYPVL--A 138
T +LD C +I + ++ +M K N T L IS DY
Sbjct: 268 TLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISE-------DYEAAREV 327
Query: 139 FTQMENPNVFVYNAMIRGFVYCGYP------FRAIQCYVHMLESQVTMSTVVSACAHVGA 198
M ++ +NA+I + G P F +Q +M +Q+T+ + +SACA VGA
Sbjct: 328 LNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGA 387
Query: 199 LDLGKEIHHYAMSWGLNLDVYIGSALVDMYAKCGSLDRSLLVFFKLKDKNLYCWNAVIEG 258
L+LG+ IH Y G+ ++ ++ SAL+ MY+KCG L++S VF ++ ++++ W+A+I G
Sbjct: 388 LELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGG 447
Query: 259 LAVHGYAEKALRMFVIMEREKIMPNGVTFISILSACTHAGLVIEGRSRFSSMIRDYGIRP 318
LA+HG +A+ MF M+ + PNGVTF ++ AC+H GLV E S F M +YGI P
Sbjct: 448 LAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVP 507
Query: 319 EVEHYGCMVDMLSKAGLLDEALELINGMEFEPNSIIWGALLNGCKLHGNSEIAKDAVRQL 378
E +HY C+VD+L ++G L++A++ I M P++ +WGALL CK+H N +A+ A +L
Sbjct: 508 EEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRL 567
Query: 379 TILEPKNSGHYNLLVSMYAEEKHWMEVAHIRAMMKENGVEKKYPGSSWIELEGRIHQFSA 438
LEP+N G + LL ++YA+ W V+ +R M+ G+ KK PG S IE++G IH+F +
Sbjct: 568 LELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGL-KKEPGCSSIEIDGMIHEFLS 627
Query: 439 SADCHPDSDKIYFILTELDGQLKLAG 456
+ HP S+K+Y L E+ +LK G
Sbjct: 628 GDNAHPMSEKVYGKLHEVMEKLKSNG 645
BLAST of Cp4.1LG15g00790 vs. NCBI nr
Match:
XP_023554768.1 (pentatricopeptide repeat-containing protein At1g06143 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 777 bits (2006), Expect = 7.58e-279
Identity = 418/586 (71.33%), Postives = 418/586 (71.33%), Query Frame = 0
Query: 44 MFSITPTNALKQITRSISNFASSSTPRTLQGSYVSTFKQTLLDRIKNCSTINELDGIYAS 103
MFSITPTNALKQITRSISNFASSSTPRTLQGSYVSTFKQTLLDRIKNCSTINELDGIYAS
Sbjct: 1 MFSITPTNALKQITRSISNFASSSTPRTLQGSYVSTFKQTLLDRIKNCSTINELDGIYAS 60
Query: 104 MIKTNATQDCFLVNQFISASLTFNSVDYPVLAFTQMENPNVFVYNAMIRGFVYCGYPFRA 163
MIKTNATQDCFLVNQFISASLTFNSVDYPVLAFTQMENPNVFVYNAMIRGFVYCGYPFRA
Sbjct: 61 MIKTNATQDCFLVNQFISASLTFNSVDYPVLAFTQMENPNVFVYNAMIRGFVYCGYPFRA 120
Query: 164 IQCYVHMLESQV------------------------------------------------ 223
IQCYVHMLESQV
Sbjct: 121 IQCYVHMLESQVLPSSYTFSSLVKACTCMCALDLGRMIHCHIWKNGLELDVFVQTSLIDL 180
Query: 224 ------------------------------------------------------------ 283
Sbjct: 181 YSNLERFGDARKVFDEMRERDTFAWTTMVSALARAGDMDTARKLFEEMPESNTATWNTMI 240
Query: 284 ------------------------------------------------------------ 343
Sbjct: 241 DGYARLGNVESAEFLFNQMPARDIISWTTMITCYSQNKQYEEALTIYGDMRLNGIIPDEV 300
Query: 344 TMSTVVSACAHVGALDLGKEIHHYAMSWGLNLDVYIGSALVDMYAKCGSLDRSLLVFFKL 403
TMSTVVSACAHVGALDLGKEIHHYAMSWGLNLDVYIGSALVDMYAKCGSLDRSLLVFFKL
Sbjct: 301 TMSTVVSACAHVGALDLGKEIHHYAMSWGLNLDVYIGSALVDMYAKCGSLDRSLLVFFKL 360
Query: 404 KDKNLYCWNAVIEGLAVHGYAEKALRMFVIMEREKIMPNGVTFISILSACTHAGLVIEGR 461
KDKNLYCWNAVIEGLAVHGYAEKALRMFVIMEREKIMPNGVTFISILSACTHAGLVIEGR
Sbjct: 361 KDKNLYCWNAVIEGLAVHGYAEKALRMFVIMEREKIMPNGVTFISILSACTHAGLVIEGR 420
BLAST of Cp4.1LG15g00790 vs. NCBI nr
Match:
XP_022963550.1 (pentatricopeptide repeat-containing protein At1g06143 [Cucurbita moschata])
HSP 1 Score: 762 bits (1967), Expect = 6.49e-273
Identity = 410/586 (69.97%), Postives = 416/586 (70.99%), Query Frame = 0
Query: 44 MFSITPTNALKQITRSISNFASSSTPRTLQGSYVSTFKQTLLDRIKNCSTINELDGIYAS 103
MFSITPTNALKQITRSISNF SSSTPRTLQGSYVSTFKQTLLDRIKNCSTINELDGIYAS
Sbjct: 1 MFSITPTNALKQITRSISNFVSSSTPRTLQGSYVSTFKQTLLDRIKNCSTINELDGIYAS 60
Query: 104 MIKTNATQDCFLVNQFISASLTFNSVDYPVLAFTQMENPNVFVYNAMIRGFVYCGYPFRA 163
MIKTNATQDCFLVNQFISASLTFNSVDYPVLAFTQMENPNVFVYNAMIRGFVYCGYPFRA
Sbjct: 61 MIKTNATQDCFLVNQFISASLTFNSVDYPVLAFTQMENPNVFVYNAMIRGFVYCGYPFRA 120
Query: 164 IQCYVHMLES-------------------------------------------------- 223
IQCYVHMLES
Sbjct: 121 IQCYVHMLESKVLPSSYTFSSLVKACTCMCALDLGRMIHCHIWKNGLELDVFVQTSLIDL 180
Query: 224 ------------------------------------------------------------ 283
Sbjct: 181 YSNLERFGDARKVFDEMRERDTFAWTTMVSALARAGDMDSARKLFEEMPESNTATWNTMI 240
Query: 284 ----------------------------------------------------------QV 343
+V
Sbjct: 241 DGYARLGNVESAEFLFNQMPARDIISWTTMITCYSQNKQYEEALTIYGNMRLNGIIPDEV 300
Query: 344 TMSTVVSACAHVGALDLGKEIHHYAMSWGLNLDVYIGSALVDMYAKCGSLDRSLLVFFKL 403
TMSTVVSACAHVGAL+LGKEIHHYAMS GLNLDVYIGSALVDMYAKCGSLDRSLLVFFKL
Sbjct: 301 TMSTVVSACAHVGALELGKEIHHYAMSRGLNLDVYIGSALVDMYAKCGSLDRSLLVFFKL 360
Query: 404 KDKNLYCWNAVIEGLAVHGYAEKALRMFVIMEREKIMPNGVTFISILSACTHAGLVIEGR 461
KDKNLYCWNAVIEGLAVHGYAEKALRMFVIMEREKIMPNGVTFISILSACTHAGLVIEGR
Sbjct: 361 KDKNLYCWNAVIEGLAVHGYAEKALRMFVIMEREKIMPNGVTFISILSACTHAGLVIEGR 420
BLAST of Cp4.1LG15g00790 vs. NCBI nr
Match:
KAG7011261.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 761 bits (1964), Expect = 1.86e-272
Identity = 410/586 (69.97%), Postives = 416/586 (70.99%), Query Frame = 0
Query: 44 MFSITPTNALKQITRSISNFASSSTPRTLQGSYVSTFKQTLLDRIKNCSTINELDGIYAS 103
MFSITPTNALKQITRSISNF SSSTPRTLQGSYVSTFKQTLLDRIKNCSTINELDGIYAS
Sbjct: 1 MFSITPTNALKQITRSISNFVSSSTPRTLQGSYVSTFKQTLLDRIKNCSTINELDGIYAS 60
Query: 104 MIKTNATQDCFLVNQFISASLTFNSVDYPVLAFTQMENPNVFVYNAMIRGFVYCGYPFRA 163
MIKTNATQDCFLVNQFISASLTFNSVDYPVLAFTQMENPNVFVYNAMIRGFVYCGYPFRA
Sbjct: 61 MIKTNATQDCFLVNQFISASLTFNSVDYPVLAFTQMENPNVFVYNAMIRGFVYCGYPFRA 120
Query: 164 IQCYVHMLES-------------------------------------------------- 223
IQCYVHMLES
Sbjct: 121 IQCYVHMLESKVLPSSYTFSSLVKACTCMCALDLGRMIHCHIWKNGLELDVFVQTSLIDL 180
Query: 224 ------------------------------------------------------------ 283
Sbjct: 181 YSNLERFGDARKVFDEMRERDTFAWTTMVSALARAGDMDSARKLFEEMPESNTATWNTMI 240
Query: 284 ----------------------------------------------------------QV 343
+V
Sbjct: 241 DGYARLGNVESAEFLFNQMPARDIISWTTMITCYSQNKQYEEALTIYGNMRLNGIIPDEV 300
Query: 344 TMSTVVSACAHVGALDLGKEIHHYAMSWGLNLDVYIGSALVDMYAKCGSLDRSLLVFFKL 403
TMSTVVSACAHVGAL+LGKEIHHYA+S GLNLDVYIGSALVDMYAKCGSLDRSLLVFFKL
Sbjct: 301 TMSTVVSACAHVGALELGKEIHHYAISRGLNLDVYIGSALVDMYAKCGSLDRSLLVFFKL 360
Query: 404 KDKNLYCWNAVIEGLAVHGYAEKALRMFVIMEREKIMPNGVTFISILSACTHAGLVIEGR 461
KDKNLYCWNAVIEGLAVHGYAEKALRMFVIMEREKIMPNGVTFISILSACTHAGLVIEGR
Sbjct: 361 KDKNLYCWNAVIEGLAVHGYAEKALRMFVIMEREKIMPNGVTFISILSACTHAGLVIEGR 420
BLAST of Cp4.1LG15g00790 vs. NCBI nr
Match:
KAG6571513.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 760 bits (1962), Expect = 3.74e-272
Identity = 410/586 (69.97%), Postives = 415/586 (70.82%), Query Frame = 0
Query: 44 MFSITPTNALKQITRSISNFASSSTPRTLQGSYVSTFKQTLLDRIKNCSTINELDGIYAS 103
MFSITPTNALKQITRSISNF SSSTPRTLQGSYVSTFKQTLLDRIKNCSTINELDGIYAS
Sbjct: 1 MFSITPTNALKQITRSISNFVSSSTPRTLQGSYVSTFKQTLLDRIKNCSTINELDGIYAS 60
Query: 104 MIKTNATQDCFLVNQFISASLTFNSVDYPVLAFTQMENPNVFVYNAMIRGFVYCGYPFRA 163
MIKTNATQDCFLVNQFISASLTFNSVDYPVLAF QMENPNVFVYNAMIRGFVYCGYPFRA
Sbjct: 61 MIKTNATQDCFLVNQFISASLTFNSVDYPVLAFIQMENPNVFVYNAMIRGFVYCGYPFRA 120
Query: 164 IQCYVHMLES-------------------------------------------------- 223
IQCYVHMLES
Sbjct: 121 IQCYVHMLESKVLPSSYTFSSLVKACTCMCALDLGRMIHCHIWKNGLELDVFVQTSLIDL 180
Query: 224 ------------------------------------------------------------ 283
Sbjct: 181 YSNLERFGDARKVFDEMRERDTFAWTTMVSALARAGDMDSARKLFEEMPESNTATWNTMI 240
Query: 284 ----------------------------------------------------------QV 343
+V
Sbjct: 241 DGYARLGNVESAEFLFNQMPARDIISWTTMITCYSQNKQYEEALTIYGNMRLNGIIPDEV 300
Query: 344 TMSTVVSACAHVGALDLGKEIHHYAMSWGLNLDVYIGSALVDMYAKCGSLDRSLLVFFKL 403
TMSTVVSACAHVGAL+LGKEIHHYAMS GLNLDVYIGSALVDMYAKCGSLDRSLLVFFKL
Sbjct: 301 TMSTVVSACAHVGALELGKEIHHYAMSRGLNLDVYIGSALVDMYAKCGSLDRSLLVFFKL 360
Query: 404 KDKNLYCWNAVIEGLAVHGYAEKALRMFVIMEREKIMPNGVTFISILSACTHAGLVIEGR 461
KDKNLYCWNAVIEGLAVHGYAEKALRMFVIMEREKIMPNGVTFISILSACTHAGLVIEGR
Sbjct: 361 KDKNLYCWNAVIEGLAVHGYAEKALRMFVIMEREKIMPNGVTFISILSACTHAGLVIEGR 420
BLAST of Cp4.1LG15g00790 vs. NCBI nr
Match:
XP_022967388.1 (pentatricopeptide repeat-containing protein At1g06143 [Cucurbita maxima])
HSP 1 Score: 750 bits (1936), Expect = 3.37e-268
Identity = 405/586 (69.11%), Postives = 409/586 (69.80%), Query Frame = 0
Query: 44 MFSITPTNALKQITRSISNFASSSTPRTLQGSYVSTFKQTLLDRIKNCSTINELDGIYAS 103
MFSITPTNALKQITRSISNF SSST RTLQG YV TFKQTLLDRIKNCSTINELDGIYAS
Sbjct: 1 MFSITPTNALKQITRSISNFVSSSTSRTLQGPYVPTFKQTLLDRIKNCSTINELDGIYAS 60
Query: 104 MIKTNATQDCFLVNQFISASLTFNSVDYPVLAFTQMENPNVFVYNAMIRGFVYCGYPFRA 163
MIK NATQDCFLVNQFISASLTFNSVDYPVLAFTQMENPNVFVYNAMIRGFVYCGYPFRA
Sbjct: 61 MIKANATQDCFLVNQFISASLTFNSVDYPVLAFTQMENPNVFVYNAMIRGFVYCGYPFRA 120
Query: 164 IQCYVHMLESQV------------------------------------------------ 223
IQCYVHMLESQV
Sbjct: 121 IQCYVHMLESQVLPSSYTFSSLVKACTCMCALDLGRMIHCQIWTHGLELDVFVQTSLIDL 180
Query: 224 ------------------------------------------------------------ 283
Sbjct: 181 YSNLERFGDARKVFDEMRERDTFAWTTMVSALARAGDMDSARKLFEEMPESNTATWNTMI 240
Query: 284 ------------------------------------------------------------ 343
Sbjct: 241 DGYARLGNVESAEFLFNQMPARDIISWTTMITCYSQNKQYEEALMIYGDMRLNGIIPDEV 300
Query: 344 TMSTVVSACAHVGALDLGKEIHHYAMSWGLNLDVYIGSALVDMYAKCGSLDRSLLVFFKL 403
TMSTVVSACAHVGAL+LGKEIHHYAMS GLNLDVYIGSALVDMYAKCGSLDRSLLVFFKL
Sbjct: 301 TMSTVVSACAHVGALELGKEIHHYAMSRGLNLDVYIGSALVDMYAKCGSLDRSLLVFFKL 360
Query: 404 KDKNLYCWNAVIEGLAVHGYAEKALRMFVIMEREKIMPNGVTFISILSACTHAGLVIEGR 461
KDKNLYCWNAVIEGLAVHGYAEKALRMFVIMEREKIMPNGVTFISILSACTHAGLV+EGR
Sbjct: 361 KDKNLYCWNAVIEGLAVHGYAEKALRMFVIMEREKIMPNGVTFISILSACTHAGLVVEGR 420
BLAST of Cp4.1LG15g00790 vs. ExPASy TrEMBL
Match:
A0A6J1HIB3 (pentatricopeptide repeat-containing protein At1g06143 OS=Cucurbita moschata OX=3662 GN=LOC111463844 PE=4 SV=1)
HSP 1 Score: 762 bits (1967), Expect = 3.14e-273
Identity = 410/586 (69.97%), Postives = 416/586 (70.99%), Query Frame = 0
Query: 44 MFSITPTNALKQITRSISNFASSSTPRTLQGSYVSTFKQTLLDRIKNCSTINELDGIYAS 103
MFSITPTNALKQITRSISNF SSSTPRTLQGSYVSTFKQTLLDRIKNCSTINELDGIYAS
Sbjct: 1 MFSITPTNALKQITRSISNFVSSSTPRTLQGSYVSTFKQTLLDRIKNCSTINELDGIYAS 60
Query: 104 MIKTNATQDCFLVNQFISASLTFNSVDYPVLAFTQMENPNVFVYNAMIRGFVYCGYPFRA 163
MIKTNATQDCFLVNQFISASLTFNSVDYPVLAFTQMENPNVFVYNAMIRGFVYCGYPFRA
Sbjct: 61 MIKTNATQDCFLVNQFISASLTFNSVDYPVLAFTQMENPNVFVYNAMIRGFVYCGYPFRA 120
Query: 164 IQCYVHMLES-------------------------------------------------- 223
IQCYVHMLES
Sbjct: 121 IQCYVHMLESKVLPSSYTFSSLVKACTCMCALDLGRMIHCHIWKNGLELDVFVQTSLIDL 180
Query: 224 ------------------------------------------------------------ 283
Sbjct: 181 YSNLERFGDARKVFDEMRERDTFAWTTMVSALARAGDMDSARKLFEEMPESNTATWNTMI 240
Query: 284 ----------------------------------------------------------QV 343
+V
Sbjct: 241 DGYARLGNVESAEFLFNQMPARDIISWTTMITCYSQNKQYEEALTIYGNMRLNGIIPDEV 300
Query: 344 TMSTVVSACAHVGALDLGKEIHHYAMSWGLNLDVYIGSALVDMYAKCGSLDRSLLVFFKL 403
TMSTVVSACAHVGAL+LGKEIHHYAMS GLNLDVYIGSALVDMYAKCGSLDRSLLVFFKL
Sbjct: 301 TMSTVVSACAHVGALELGKEIHHYAMSRGLNLDVYIGSALVDMYAKCGSLDRSLLVFFKL 360
Query: 404 KDKNLYCWNAVIEGLAVHGYAEKALRMFVIMEREKIMPNGVTFISILSACTHAGLVIEGR 461
KDKNLYCWNAVIEGLAVHGYAEKALRMFVIMEREKIMPNGVTFISILSACTHAGLVIEGR
Sbjct: 361 KDKNLYCWNAVIEGLAVHGYAEKALRMFVIMEREKIMPNGVTFISILSACTHAGLVIEGR 420
BLAST of Cp4.1LG15g00790 vs. ExPASy TrEMBL
Match:
A0A6J1HUY6 (pentatricopeptide repeat-containing protein At1g06143 OS=Cucurbita maxima OX=3661 GN=LOC111466933 PE=4 SV=1)
HSP 1 Score: 750 bits (1936), Expect = 1.63e-268
Identity = 405/586 (69.11%), Postives = 409/586 (69.80%), Query Frame = 0
Query: 44 MFSITPTNALKQITRSISNFASSSTPRTLQGSYVSTFKQTLLDRIKNCSTINELDGIYAS 103
MFSITPTNALKQITRSISNF SSST RTLQG YV TFKQTLLDRIKNCSTINELDGIYAS
Sbjct: 1 MFSITPTNALKQITRSISNFVSSSTSRTLQGPYVPTFKQTLLDRIKNCSTINELDGIYAS 60
Query: 104 MIKTNATQDCFLVNQFISASLTFNSVDYPVLAFTQMENPNVFVYNAMIRGFVYCGYPFRA 163
MIK NATQDCFLVNQFISASLTFNSVDYPVLAFTQMENPNVFVYNAMIRGFVYCGYPFRA
Sbjct: 61 MIKANATQDCFLVNQFISASLTFNSVDYPVLAFTQMENPNVFVYNAMIRGFVYCGYPFRA 120
Query: 164 IQCYVHMLESQV------------------------------------------------ 223
IQCYVHMLESQV
Sbjct: 121 IQCYVHMLESQVLPSSYTFSSLVKACTCMCALDLGRMIHCQIWTHGLELDVFVQTSLIDL 180
Query: 224 ------------------------------------------------------------ 283
Sbjct: 181 YSNLERFGDARKVFDEMRERDTFAWTTMVSALARAGDMDSARKLFEEMPESNTATWNTMI 240
Query: 284 ------------------------------------------------------------ 343
Sbjct: 241 DGYARLGNVESAEFLFNQMPARDIISWTTMITCYSQNKQYEEALMIYGDMRLNGIIPDEV 300
Query: 344 TMSTVVSACAHVGALDLGKEIHHYAMSWGLNLDVYIGSALVDMYAKCGSLDRSLLVFFKL 403
TMSTVVSACAHVGAL+LGKEIHHYAMS GLNLDVYIGSALVDMYAKCGSLDRSLLVFFKL
Sbjct: 301 TMSTVVSACAHVGALELGKEIHHYAMSRGLNLDVYIGSALVDMYAKCGSLDRSLLVFFKL 360
Query: 404 KDKNLYCWNAVIEGLAVHGYAEKALRMFVIMEREKIMPNGVTFISILSACTHAGLVIEGR 461
KDKNLYCWNAVIEGLAVHGYAEKALRMFVIMEREKIMPNGVTFISILSACTHAGLV+EGR
Sbjct: 361 KDKNLYCWNAVIEGLAVHGYAEKALRMFVIMEREKIMPNGVTFISILSACTHAGLVVEGR 420
BLAST of Cp4.1LG15g00790 vs. ExPASy TrEMBL
Match:
A0A0A0LB99 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G395920 PE=4 SV=1)
HSP 1 Score: 641 bits (1654), Expect = 1.66e-225
Identity = 352/588 (59.86%), Postives = 371/588 (63.10%), Query Frame = 0
Query: 44 MFSITPTNALKQITRSISNFASS-STPRTLQGSYVSTFKQTLLDRIKNCSTINELDGIYA 103
MFS TNALKQ+TRSI NF S S LQ +FKQTLL+RIKNCSTINEL G+ A
Sbjct: 1 MFSFVTTNALKQLTRSIGNFVSPPSISMPLQPPSCPSFKQTLLNRIKNCSTINELHGLCA 60
Query: 104 SMIKTNATQDCFLVNQFISASLTFNSVDYPVLAFTQMENPNVFVYNAMIRGFVYCGYPFR 163
SMIKTNA QDCFLV+QFISAS NSV YPV AFTQMENPNVFVYNAMI+GFVYCGYPFR
Sbjct: 61 SMIKTNAIQDCFLVHQFISASFALNSVHYPVFAFTQMENPNVFVYNAMIKGFVYCGYPFR 120
Query: 164 AIQCYVHMLES------------------------------------------------- 223
A+QCYVHMLE
Sbjct: 121 ALQCYVHMLEESNVLPTSYTFSSLVKACTFMCAVELGQMVHCHIWKKGFESHLFVQTALV 180
Query: 224 ------------------------------------------------------------ 283
Sbjct: 181 DFYSKLEILSEARKVFDEMCERDAFAWTAMVSALARVGDMDSARKLFEEMPERNTATWNT 240
Query: 284 ------------------------------------------------------------ 343
Sbjct: 241 MIDGYARLGNVESAELLFNQMPTKDIISWTTMITCYSQNKQYQDALAIYSEMRLNGIIPD 300
Query: 344 QVTMSTVVSACAHVGALDLGKEIHHYAMSWGLNLDVYIGSALVDMYAKCGSLDRSLLVFF 403
+VTMSTV SACAH+GAL+LGKEIHHY MS GLNLDVYIGSALVDMYAKCGSLD SLL+FF
Sbjct: 301 EVTMSTVASACAHIGALELGKEIHHYVMSQGLNLDVYIGSALVDMYAKCGSLDLSLLIFF 360
Query: 404 KLKDKNLYCWNAVIEGLAVHGYAEKALRMFVIMEREKIMPNGVTFISILSACTHAGLVIE 461
KL DKNLYCWNAVIEGLAVHGYAEKALRMF IMEREKIMPNGVTFISILSACTHAGLV E
Sbjct: 361 KLTDKNLYCWNAVIEGLAVHGYAEKALRMFAIMEREKIMPNGVTFISILSACTHAGLVDE 420
BLAST of Cp4.1LG15g00790 vs. ExPASy TrEMBL
Match:
A0A5A7T9J0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00860 PE=4 SV=1)
HSP 1 Score: 634 bits (1635), Expect = 1.23e-222
Identity = 352/587 (59.97%), Postives = 366/587 (62.35%), Query Frame = 0
Query: 44 MFSITPTNALKQITRSISNFASSSTPRTLQGSYVSTFKQTLLDRIKNCSTINELDGIYAS 103
MFS T ALKQ+TRSI NF S S LQ +FKQTLL+RIKNCS INEL +YAS
Sbjct: 1 MFSFVTTIALKQLTRSIGNFVSPSISMPLQSPSRPSFKQTLLNRIKNCSNINELHVVYAS 60
Query: 104 MIKTNATQDCFLVNQFISASLTFNSVDYPVLAFTQMENPNVFVYNAMIRGFVYCGYPFRA 163
MIK+NA QDCFLV+QFISAS FNSV YPV AFTQMENPNVFVYNAMI+GFVY GYPFR
Sbjct: 61 MIKSNAIQDCFLVHQFISASFAFNSVHYPVFAFTQMENPNVFVYNAMIKGFVYRGYPFRG 120
Query: 164 IQCYVHMLES-------------------------------------------------- 223
+QCYVHMLE
Sbjct: 121 LQCYVHMLEGSNVLPNSYTFSSLVKACTFMCAVELGQMVHCHIWKKGFESHLFVQTALVD 180
Query: 224 ------------------------------------------------------------ 283
Sbjct: 181 FYSKLEKLSEARKVFDEMCERDAFAWTTMVSALARVGDMDTARKLFEEMPERNTATWNTM 240
Query: 284 -----------------------------------------------------------Q 343
Q
Sbjct: 241 IDGYARLGNVESAELLFNQMPTKDIISWTTMITCYSQNKQYQDALAIYSETRLNGIIPDQ 300
Query: 344 VTMSTVVSACAHVGALDLGKEIHHYAMSWGLNLDVYIGSALVDMYAKCGSLDRSLLVFFK 403
VTMSTVVSACAHVGAL+LGKEIH Y MS GLN DVYIGSALVDMYAKCGSLD SLL+FFK
Sbjct: 301 VTMSTVVSACAHVGALELGKEIHQYVMSQGLNHDVYIGSALVDMYAKCGSLDWSLLIFFK 360
Query: 404 LKDKNLYCWNAVIEGLAVHGYAEKALRMFVIMEREKIMPNGVTFISILSACTHAGLVIEG 461
LKDKNLYCWNAVIEGLAVHGYAEKALRMF IMEREKI+PNGVTFISILSACTHAGLV EG
Sbjct: 361 LKDKNLYCWNAVIEGLAVHGYAEKALRMFAIMEREKILPNGVTFISILSACTHAGLVEEG 420
BLAST of Cp4.1LG15g00790 vs. ExPASy TrEMBL
Match:
A0A1S3BHH1 (pentatricopeptide repeat-containing protein At1g06145-like OS=Cucumis melo OX=3656 GN=LOC103489889 PE=4 SV=1)
HSP 1 Score: 634 bits (1635), Expect = 1.23e-222
Identity = 352/587 (59.97%), Postives = 366/587 (62.35%), Query Frame = 0
Query: 44 MFSITPTNALKQITRSISNFASSSTPRTLQGSYVSTFKQTLLDRIKNCSTINELDGIYAS 103
MFS T ALKQ+TRSI NF S S LQ +FKQTLL+RIKNCS INEL +YAS
Sbjct: 1 MFSFVTTIALKQLTRSIGNFVSPSISMPLQSPSRPSFKQTLLNRIKNCSNINELHVVYAS 60
Query: 104 MIKTNATQDCFLVNQFISASLTFNSVDYPVLAFTQMENPNVFVYNAMIRGFVYCGYPFRA 163
MIK+NA QDCFLV+QFISAS FNSV YPV AFTQMENPNVFVYNAMI+GFVY GYPFR
Sbjct: 61 MIKSNAIQDCFLVHQFISASFAFNSVHYPVFAFTQMENPNVFVYNAMIKGFVYRGYPFRG 120
Query: 164 IQCYVHMLES-------------------------------------------------- 223
+QCYVHMLE
Sbjct: 121 LQCYVHMLEGSNVLPNSYTFSSLVKACTFMCAVELGQMVHCHIWKKGFESHLFVQTALVD 180
Query: 224 ------------------------------------------------------------ 283
Sbjct: 181 FYSKLEKLSEARKVFDEMCERDAFAWTTMVSALARVGDMDTARKLFEEMPERNTATWNTM 240
Query: 284 -----------------------------------------------------------Q 343
Q
Sbjct: 241 IDGYARLGNVESAELLFNQMPTKDIISWTTMITCYSQNKQYQDALAIYSETRLNGIIPDQ 300
Query: 344 VTMSTVVSACAHVGALDLGKEIHHYAMSWGLNLDVYIGSALVDMYAKCGSLDRSLLVFFK 403
VTMSTVVSACAHVGAL+LGKEIH Y MS GLN DVYIGSALVDMYAKCGSLD SLL+FFK
Sbjct: 301 VTMSTVVSACAHVGALELGKEIHQYVMSQGLNHDVYIGSALVDMYAKCGSLDWSLLIFFK 360
Query: 404 LKDKNLYCWNAVIEGLAVHGYAEKALRMFVIMEREKIMPNGVTFISILSACTHAGLVIEG 461
LKDKNLYCWNAVIEGLAVHGYAEKALRMF IMEREKI+PNGVTFISILSACTHAGLV EG
Sbjct: 361 LKDKNLYCWNAVIEGLAVHGYAEKALRMFAIMEREKILPNGVTFISILSACTHAGLVEEG 420
BLAST of Cp4.1LG15g00790 vs. TAIR 10
Match:
AT1G06150.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )
HSP 1 Score: 377.1 bits (967), Expect = 2.0e-104
Identity = 214/538 (39.78%), Postives = 275/538 (51.12%), Query Frame = 0
Query: 88 IKNCSTINELDGIYASMIKTNATQDCFLVNQFISASLTFNSVDYPVLAFTQMENPNVFVY 147
IK CST L+ A+MIKT+ QDC L+NQFI+A +F +D V TQM+ PNVFVY
Sbjct: 780 IKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVY 839
Query: 148 NAMIRGFVYCGYPFRAIQCYVHMLE----------------------------------- 207
NA+ +GFV C +P R+++ YV ML
Sbjct: 840 NALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQAHIWKFG 899
Query: 208 ------------------------------------------------------------ 267
Sbjct: 900 FGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLAN 959
Query: 268 ------------------------------------------------------------ 327
Sbjct: 960 QMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAV 1019
Query: 328 -----------SQVTMSTVVSACAHVGALDLGKEIHHYAMSWGLNLDVYIGSALVDMYAK 387
+VTMSTV+SACAH+G L++GKE+H Y + G LDVYIGSALVDMY+K
Sbjct: 1020 FYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSK 1079
Query: 388 CGSLDRSLLVFFKLKDKNLYCWNAVIEGLAVHGYAEKALRMFVIMEREKIMPNGVTFISI 447
CGSL+R+LLVFF L KNL+CWN++IEGLA HG+A++AL+MF ME E + PN VTF+S+
Sbjct: 1080 CGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSV 1139
Query: 448 LSACTHAGLVIEGRSRFSSMIRDYGIRPEVEHYGCMVDMLSKAGLLDEALELINGMEFEP 460
+ACTHAGLV EGR + SMI DY I VEHYG MV + SKAGL+ EALELI MEFEP
Sbjct: 1140 FTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEP 1199
BLAST of Cp4.1LG15g00790 vs. TAIR 10
Match:
AT4G02750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 282.0 bits (720), Expect = 8.9e-76
Identity = 134/331 (40.48%), Postives = 210/331 (63.44%), Query Frame = 0
Query: 136 FTQMENPNVFVYNAMIRGFVYCGYPFRAIQCYVHMLE-----SQVTMSTVVSACAHVGAL 195
F +M + + AMI G+ G+ F A++ +V M ++ + S+ +S CA V AL
Sbjct: 366 FDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVAL 425
Query: 196 DLGKEIHHYAMSWGLNLDVYIGSALVDMYAKCGSLDRSLLVFFKLKDKNLYCWNAVIEGL 255
+LGK++H + G ++G+AL+ MY KCGS++ + +F ++ K++ WN +I G
Sbjct: 426 ELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGY 485
Query: 256 AVHGYAEKALRMFVIMEREKIMPNGVTFISILSACTHAGLVIEGRSRFSSMIRDYGIRPE 315
+ HG+ E ALR F M+RE + P+ T +++LSAC+H GLV +GR F +M +DYG+ P
Sbjct: 486 SRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPN 545
Query: 316 VEHYGCMVDMLSKAGLLDEALELINGMEFEPNSIIWGALLNGCKLHGNSEIAKDAVRQLT 375
+HY CMVD+L +AGLL++A L+ M FEP++ IWG LL ++HGN+E+A+ A ++
Sbjct: 546 SQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIF 605
Query: 376 ILEPKNSGHYNLLVSMYAEEKHWMEVAHIRAMMKENGVEKKYPGSSWIELEGRIHQFSAS 435
+EP+NSG Y LL ++YA W +V +R M++ GV KK PG SWIE++ + H FS
Sbjct: 606 AMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGV-KKVPGYSWIEIQNKTHTFSVG 665
Query: 436 ADCHPDSDKIYFILTELDGQLKLAGNVLEPS 462
+ HP+ D+I+ L ELD ++K AG V + S
Sbjct: 666 DEFHPEKDEIFAFLEELDLRMKKAGYVSKTS 695
BLAST of Cp4.1LG15g00790 vs. TAIR 10
Match:
AT1G50270.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 273.5 bits (698), Expect = 3.2e-73
Identity = 138/348 (39.66%), Postives = 208/348 (59.77%), Query Frame = 0
Query: 112 DCFLVNQFISASLTFNSVDYPVLAFTQMENPNVFVYNAMIRGFVYCGYPFRAIQCYVHML 171
D F+ + + + D F +M + NV + A+I G+V + + + ML
Sbjct: 239 DVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEML 298
Query: 172 ESQV-----TMSTVVSACAHVGALDLGKEIHHYAMSWGLNLDVYIGSALVDMYAKCGSLD 231
+S V T+S+V+SACAHVGAL G+ +H Y + + ++ G+ L+D+Y KCG L+
Sbjct: 299 KSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLE 358
Query: 232 RSLLVFFKLKDKNLYCWNAVIEGLAVHGYAEKALRMFVIMEREKIMPNGVTFISILSACT 291
++LVF +L +KN+Y W A+I G A HGYA A +F M + PN VTF+++LSAC
Sbjct: 359 EAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACA 418
Query: 292 HAGLVIEGRSRFSSMIRDYGIRPEVEHYGCMVDMLSKAGLLDEALELINGMEFEPNSIIW 351
H GLV EGR F SM + + P+ +HY CMVD+ + GLL+EA LI M EP +++W
Sbjct: 419 HGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVW 478
Query: 352 GALLNGCKLHGNSEIAKDAVRQLTILEPKNSGHYNLLVSMYAEEKHWMEVAHIRAMMKEN 411
GAL C LH + E+ K A ++ L+P +SG Y LL ++Y+E ++W EVA +R MK+
Sbjct: 479 GALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQ 538
Query: 412 GVEKKYPGSSWIELEGRIHQFSASADCHP-DSDKIYFILTELDGQLKL 454
V K PG SWIE++G++ +F A D P +SD +Y L + Q++L
Sbjct: 539 QVVKS-PGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQMRL 585
BLAST of Cp4.1LG15g00790 vs. TAIR 10
Match:
AT3G46790.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 270.4 bits (690), Expect = 2.7e-72
Identity = 139/389 (35.73%), Postives = 226/389 (58.10%), Query Frame = 0
Query: 79 TFKQTLLDRIKNCSTINEL---DGIYASMIKTNATQDCFLVNQFISASLTFNSVDYPVLA 138
T+ L + + T+N L I+A + + + +++ + F VDY
Sbjct: 180 TYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYV 239
Query: 139 FTQMENPNVFVYNAMIRGFVYCGYPFRAIQCYVHMLE-------SQVTMSTVVSACAHVG 198
F M NV ++AMI + G F A++ + M+ + VTM +V+ ACA +
Sbjct: 240 FGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLA 299
Query: 199 ALDLGKEIHHYAMSWGLNLDVYIGSALVDMYAKCGSLDRSLLVFFKLKDKNLYCWNAVIE 258
AL+ GK IH Y + GL+ + + SALV MY +CG L+ VF ++ D+++ WN++I
Sbjct: 300 ALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLIS 359
Query: 259 GLAVHGYAEKALRMFVIMEREKIMPNGVTFISILSACTHAGLVIEGRSRFSSMIRDYGIR 318
VHGY +KA+++F M P VTF+S+L AC+H GLV EG+ F +M RD+GI+
Sbjct: 360 SYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIK 419
Query: 319 PEVEHYGCMVDMLSKAGLLDEALELINGMEFEPNSIIWGALLNGCKLHGNSEIAKDAVRQ 378
P++EHY CMVD+L +A LDEA +++ M EP +WG+LL C++HGN E+A+ A R+
Sbjct: 420 PQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRR 479
Query: 379 LTILEPKNSGHYNLLVSMYAEEKHWMEVAHIRAMMKENGVEKKYPGSSWIELEGRIHQFS 438
L LEPKN+G+Y LL +YAE + W EV ++ +++ G++ K PG W+E+ +++ F
Sbjct: 480 LFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQ-KLPGRCWMEVRRKMYSFV 539
Query: 439 ASADCHPDSDKIYFILTELDGQLKLAGNV 458
+ + +P ++I+ L +L +K G +
Sbjct: 540 SVDEFNPLMEQIHAFLVKLAEDMKEKGYI 567
BLAST of Cp4.1LG15g00790 vs. TAIR 10
Match:
AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 268.9 bits (686), Expect = 7.8e-72
Identity = 143/386 (37.05%), Postives = 223/386 (57.77%), Query Frame = 0
Query: 79 TFKQTLLDRIKNCSTINELDGIYASM-IKTNATQDCFLVNQFISASLTFNSVDYPVL--A 138
T +LD C +I + ++ +M K N T L IS DY
Sbjct: 268 TLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISE-------DYEAAREV 327
Query: 139 FTQMENPNVFVYNAMIRGFVYCGYP------FRAIQCYVHMLESQVTMSTVVSACAHVGA 198
M ++ +NA+I + G P F +Q +M +Q+T+ + +SACA VGA
Sbjct: 328 LNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGA 387
Query: 199 LDLGKEIHHYAMSWGLNLDVYIGSALVDMYAKCGSLDRSLLVFFKLKDKNLYCWNAVIEG 258
L+LG+ IH Y G+ ++ ++ SAL+ MY+KCG L++S VF ++ ++++ W+A+I G
Sbjct: 388 LELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGG 447
Query: 259 LAVHGYAEKALRMFVIMEREKIMPNGVTFISILSACTHAGLVIEGRSRFSSMIRDYGIRP 318
LA+HG +A+ MF M+ + PNGVTF ++ AC+H GLV E S F M +YGI P
Sbjct: 448 LAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVP 507
Query: 319 EVEHYGCMVDMLSKAGLLDEALELINGMEFEPNSIIWGALLNGCKLHGNSEIAKDAVRQL 378
E +HY C+VD+L ++G L++A++ I M P++ +WGALL CK+H N +A+ A +L
Sbjct: 508 EEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRL 567
Query: 379 TILEPKNSGHYNLLVSMYAEEKHWMEVAHIRAMMKENGVEKKYPGSSWIELEGRIHQFSA 438
LEP+N G + LL ++YA+ W V+ +R M+ G+ KK PG S IE++G IH+F +
Sbjct: 568 LELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGL-KKEPGCSSIEIDGMIHEFLS 627
Query: 439 SADCHPDSDKIYFILTELDGQLKLAG 456
+ HP S+K+Y L E+ +LK G
Sbjct: 628 GDNAHPMSEKVYGKLHEVMEKLKSNG 645
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q56X05 | 2.9e-103 | 39.78 | Pentatricopeptide repeat-containing protein At1g06143 OS=Arabidopsis thaliana OX... | [more] |
Q9SY02 | 1.3e-74 | 40.48 | Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX... | [more] |
Q9SX45 | 4.4e-72 | 39.66 | Pentatricopeptide repeat-containing protein At1g50270 OS=Arabidopsis thaliana OX... | [more] |
Q9STF3 | 3.8e-71 | 35.73 | Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidop... | [more] |
O82380 | 1.1e-70 | 37.05 | Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
XP_023554768.1 | 7.58e-279 | 71.33 | pentatricopeptide repeat-containing protein At1g06143 [Cucurbita pepo subsp. pep... | [more] |
XP_022963550.1 | 6.49e-273 | 69.97 | pentatricopeptide repeat-containing protein At1g06143 [Cucurbita moschata] | [more] |
KAG7011261.1 | 1.86e-272 | 69.97 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
KAG6571513.1 | 3.74e-272 | 69.97 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_022967388.1 | 3.37e-268 | 69.11 | pentatricopeptide repeat-containing protein At1g06143 [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1HIB3 | 3.14e-273 | 69.97 | pentatricopeptide repeat-containing protein At1g06143 OS=Cucurbita moschata OX=3... | [more] |
A0A6J1HUY6 | 1.63e-268 | 69.11 | pentatricopeptide repeat-containing protein At1g06143 OS=Cucurbita maxima OX=366... | [more] |
A0A0A0LB99 | 1.66e-225 | 59.86 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G395920 PE=4 SV=1 | [more] |
A0A5A7T9J0 | 1.23e-222 | 59.97 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3BHH1 | 1.23e-222 | 59.97 | pentatricopeptide repeat-containing protein At1g06145-like OS=Cucumis melo OX=36... | [more] |
Match Name | E-value | Identity | Description | |
AT1G06150.1 | 2.0e-104 | 39.78 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | [more] |
AT4G02750.1 | 8.9e-76 | 40.48 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G50270.1 | 3.2e-73 | 39.66 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G46790.1 | 2.7e-72 | 35.73 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G29760.1 | 7.8e-72 | 37.05 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |