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Cp4.1LG15g00690 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTCTTCTTCTTCTTCTTCTAGTACTGCAAATAGTAGCGTGTCGGGCGGCGGCGGCGGCGGCGGCGGTGGCGGTGGTGGTGGCTCTCCTTGTGGAGCATGCAAGTTTCTGCGGCGGAAATGTGTGGCTGAGTGTATTTTTGCTCCTTACTTTAGCTCGGAACAAGGGGCTGCAAGATTTGCCGCCGTTCATAAAGTGTTTGGGGCTAGTAATGTGTCTAAGTTGCTGCTTCATGTCCCTGCTCATGATCGCTGTGAGGCTGTTGTTACTATTGCTTATGAAGCTCAAGCAAGGATTCTTGACCCTGTTTATGGCTGTGTTGCCCATATTTTTGCTCTCCAACAACAGGTAATTTTGAATATGAATGCAAGATTATGTTTTTGAGGGTTCGGGAAACCTGATCAACCCAATTCAAGCTAAGCTATATGGTTTGGGTTGAGTTACGAACTTGTTTGAATTATTTGAATTGGGTTCAGTTTCAAATAGATGAATATTTTACTGATTGAATTGAATTGATTCATGAGTTTCTTTAAAACTAGATAGGATTGTGAGATCACACGTGGGTTAGAGAGAGGAACGAAACATTCCTTGTAAGTGTAACATCTCGAACCAATCACTAGTAGATATTGTCCGTTTTAGCATGTTACGTATTGTCATCAGTCTCATTGGTCTTCGTAACCCTTTCCAACCAATGTGAGATCTCACTATCCACCCCCTTGGGGGTCTAGCGTCCTGGCTAGCACACCGCCCAATATCTGACTCTGATACCATTTGTAACATCTCAAGCCCACCGCTAACAGATATTGTCCATTTCATTTTGTTACGTATGGTCGTCAACCTCACAGTTTTTAAACGCATCTACTAGGGAAAGATTTTCACAACCTTATAAGAAATGTTTCGTTTCTCTTTCCAACTGATGTGAGATCTCACAACAAGGATATGAAAACCTCTTCTTAGCAGACACGTTTTTTCGTGAGATCGAGAACCAAATCGGACAATATCCGCTAGCTGTGGTCTTTGGACAAAGAAAATTTCAAATGAATAACCTTAATAACTCAAACTAACCTAACAAATTGAGTTGAGTTCATTATTTAAGAAGAGTAATCTAGATTGAAAAAATTATCAAATCTAACAATTGAATTAGGTCAAAAAGTCTCAATCTGACTCAACCGAACCCACGAACACCCTTTTTAAAATCCTTAAAATGGGGTTTTGTTTGTTGTTGTTGATTTTGAAGGTGGCATACTTACAAGCACAATTGATGCAAGCCAAGGCTCAACTTGCCCAAACCCTGATGGAATCAGGAGGCAACATGGAGCTTCAATGGACAGGGAGCTTCAATAACAATCTCTCCAATGGAATCCCAAGCAATTATGAGACTCAAATTATGAACCCAGCAGTTTCCCCACAGAGCTCAGTGGAATCAGCAGCCAACAACGATGCAGCATTAATGTTCATGAACCATTATCAAGAGAGCCAAACATTGGCTAGAAGAAGATCAGCTTCATGTCATGGTGATCTTGGGGAGCTTCAAGCTTTGGCCCTTAGAATGATGAGAAACTAA ATGGCGTCTTCTTCTTCTTCTTCTAGTACTGCAAATAGTAGCGTGTCGGGCGGCGGCGGCGGCGGCGGCGGTGGCGGTGGTGGTGGCTCTCCTTGTGGAGCATGCAAGTTTCTGCGGCGGAAATGTGTGGCTGAGTGTATTTTTGCTCCTTACTTTAGCTCGGAACAAGGGGCTGCAAGATTTGCCGCCGTTCATAAAGTGTTTGGGGCTAGTAATGTGTCTAAGTTGCTGCTTCATGTCCCTGCTCATGATCGCTGTGAGGCTGTTGTTACTATTGCTTATGAAGCTCAAGCAAGGATTCTTGACCCTGTTTATGGCTCACAATTGATGCAAGCCAAGGCTCAACTTGCCCAAACCCTGATGGAATCAGGAGGCAACATGGAGCTTCAATGGACAGGGAGCTTCAATAACAATCTCTCCAATGGAATCCCAAGCAATTATGAGACTCAAATTATGAACCCAGCAGTTTCCCCACAGAGCTCAGTGGAATCAGCAGCCAACAACGATGCAGCATTAATGTTCATGAACCATTATCAAGAGAGCCAAACATTGGCTAGAAGAAGATCAGCTTCATGTCATGGTGATCTTGGGGAGCTTCAAGCTTTGGCCCTTAGAATGATGAGAAACTAA ATGGCGTCTTCTTCTTCTTCTTCTAGTACTGCAAATAGTAGCGTGTCGGGCGGCGGCGGCGGCGGCGGCGGTGGCGGTGGTGGTGGCTCTCCTTGTGGAGCATGCAAGTTTCTGCGGCGGAAATGTGTGGCTGAGTGTATTTTTGCTCCTTACTTTAGCTCGGAACAAGGGGCTGCAAGATTTGCCGCCGTTCATAAAGTGTTTGGGGCTAGTAATGTGTCTAAGTTGCTGCTTCATGTCCCTGCTCATGATCGCTGTGAGGCTGTTGTTACTATTGCTTATGAAGCTCAAGCAAGGATTCTTGACCCTGTTTATGGCTCACAATTGATGCAAGCCAAGGCTCAACTTGCCCAAACCCTGATGGAATCAGGAGGCAACATGGAGCTTCAATGGACAGGGAGCTTCAATAACAATCTCTCCAATGGAATCCCAAGCAATTATGAGACTCAAATTATGAACCCAGCAGTTTCCCCACAGAGCTCAGTGGAATCAGCAGCCAACAACGATGCAGCATTAATGTTCATGAACCATTATCAAGAGAGCCAAACATTGGCTAGAAGAAGATCAGCTTCATGTCATGGTGATCTTGGGGAGCTTCAAGCTTTGGCCCTTAGAATGATGAGAAACTAA MASSSSSSSTANSSVSGGGGGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAARFAAVHKVFGASNVSKLLLHVPAHDRCEAVVTIAYEAQARILDPVYGSQLMQAKAQLAQTLMESGGNMELQWTGSFNNNLSNGIPSNYETQIMNPAVSPQSSVESAANNDAALMFMNHYQESQTLARRRSASCHGDLGELQALALRMMRN Homology
BLAST of Cp4.1LG15g00690 vs. ExPASy Swiss-Prot
Match: Q9SLB7 (LOB domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=LBD16 PE=1 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 7.0e-41 Identity = 117/241 (48.55%), Postives = 136/241 (56.43%), Query Frame = 0
BLAST of Cp4.1LG15g00690 vs. ExPASy Swiss-Prot
Match: O22131 (LOB domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=LBD18 PE=1 SV=2) HSP 1 Score: 136.3 bits (342), Expect = 3.8e-31 Identity = 77/111 (69.37%), Postives = 83/111 (74.77%), Query Frame = 0
BLAST of Cp4.1LG15g00690 vs. ExPASy Swiss-Prot
Match: Q5UG13 (LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=CRL1 PE=1 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 5.6e-30 Identity = 68/100 (68.00%), Postives = 76/100 (76.00%), Query Frame = 0
BLAST of Cp4.1LG15g00690 vs. ExPASy Swiss-Prot
Match: O81323 (LOB domain-containing protein 30 OS=Arabidopsis thaliana OX=3702 GN=LBD30 PE=1 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 1.2e-29 Identity = 68/92 (73.91%), Postives = 74/92 (80.43%), Query Frame = 0
BLAST of Cp4.1LG15g00690 vs. ExPASy Swiss-Prot
Match: O22132 (LOB domain-containing protein 19 OS=Arabidopsis thaliana OX=3702 GN=LBD19 PE=2 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 3.6e-29 Identity = 70/108 (64.81%), Postives = 79/108 (73.15%), Query Frame = 0
BLAST of Cp4.1LG15g00690 vs. NCBI nr
Match: XP_023511722.1 (LOB domain-containing protein 16-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 382 bits (981), Expect = 6.66e-133 Identity = 208/225 (92.44%), Postives = 209/225 (92.89%), Query Frame = 0
BLAST of Cp4.1LG15g00690 vs. NCBI nr
Match: KAG7011259.1 (LOB domain-containing protein 16, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 377 bits (967), Expect = 9.06e-131 Identity = 205/225 (91.11%), Postives = 207/225 (92.00%), Query Frame = 0
BLAST of Cp4.1LG15g00690 vs. NCBI nr
Match: XP_022967414.1 (LOB domain-containing protein 16-like [Cucurbita maxima]) HSP 1 Score: 375 bits (962), Expect = 5.42e-130 Identity = 206/226 (91.15%), Postives = 208/226 (92.04%), Query Frame = 0
BLAST of Cp4.1LG15g00690 vs. NCBI nr
Match: XP_022963633.1 (LOB domain-containing protein 16-like [Cucurbita moschata]) HSP 1 Score: 369 bits (947), Expect = 9.09e-128 Identity = 203/225 (90.22%), Postives = 204/225 (90.67%), Query Frame = 0
BLAST of Cp4.1LG15g00690 vs. NCBI nr
Match: KAG6571511.1 (LOB domain-containing protein 16, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 367 bits (943), Expect = 4.26e-127 Identity = 202/223 (90.58%), Postives = 204/223 (91.48%), Query Frame = 0
BLAST of Cp4.1LG15g00690 vs. ExPASy TrEMBL
Match: A0A6J1HWM7 (LOB domain-containing protein 16-like OS=Cucurbita maxima OX=3661 GN=LOC111466950 PE=3 SV=1) HSP 1 Score: 375 bits (962), Expect = 2.63e-130 Identity = 206/226 (91.15%), Postives = 208/226 (92.04%), Query Frame = 0
BLAST of Cp4.1LG15g00690 vs. ExPASy TrEMBL
Match: A0A6J1HIG3 (LOB domain-containing protein 16-like OS=Cucurbita moschata OX=3662 GN=LOC111463903 PE=3 SV=1) HSP 1 Score: 369 bits (947), Expect = 4.40e-128 Identity = 203/225 (90.22%), Postives = 204/225 (90.67%), Query Frame = 0
BLAST of Cp4.1LG15g00690 vs. ExPASy TrEMBL
Match: A0A0A0LAE8 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G398920 PE=3 SV=1) HSP 1 Score: 271 bits (692), Expect = 5.54e-89 Identity = 164/240 (68.33%), Postives = 181/240 (75.42%), Query Frame = 0
BLAST of Cp4.1LG15g00690 vs. ExPASy TrEMBL
Match: A0A5D3C536 (LOB domain-containing protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold718G00040 PE=3 SV=1) HSP 1 Score: 267 bits (682), Expect = 1.55e-87 Identity = 163/239 (68.20%), Postives = 179/239 (74.90%), Query Frame = 0
BLAST of Cp4.1LG15g00690 vs. ExPASy TrEMBL
Match: A0A1S3CG76 (LOB domain-containing protein 16 OS=Cucumis melo OX=3656 GN=LOC103500368 PE=3 SV=1) HSP 1 Score: 267 bits (682), Expect = 1.55e-87 Identity = 163/239 (68.20%), Postives = 179/239 (74.90%), Query Frame = 0
BLAST of Cp4.1LG15g00690 vs. TAIR 10
Match: AT2G42430.1 (lateral organ boundaries-domain 16 ) HSP 1 Score: 168.7 bits (426), Expect = 5.0e-42 Identity = 117/241 (48.55%), Postives = 136/241 (56.43%), Query Frame = 0
BLAST of Cp4.1LG15g00690 vs. TAIR 10
Match: AT2G45420.1 (LOB domain-containing protein 18 ) HSP 1 Score: 136.3 bits (342), Expect = 2.7e-32 Identity = 77/111 (69.37%), Postives = 83/111 (74.77%), Query Frame = 0
BLAST of Cp4.1LG15g00690 vs. TAIR 10
Match: AT4G00220.1 (Lateral organ boundaries (LOB) domain family protein ) HSP 1 Score: 131.3 bits (329), Expect = 8.8e-31 Identity = 68/92 (73.91%), Postives = 74/92 (80.43%), Query Frame = 0
BLAST of Cp4.1LG15g00690 vs. TAIR 10
Match: AT2G45410.1 (LOB domain-containing protein 19 ) HSP 1 Score: 129.8 bits (325), Expect = 2.6e-30 Identity = 70/108 (64.81%), Postives = 79/108 (73.15%), Query Frame = 0
BLAST of Cp4.1LG15g00690 vs. TAIR 10
Match: AT3G03760.1 (LOB domain-containing protein 20 ) HSP 1 Score: 123.2 bits (308), Expect = 2.4e-28 Identity = 76/127 (59.84%), Postives = 91/127 (71.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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