Cp4.1LG14g09360 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG14g09360
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1
Location	Cp4.1LG14: 7906867 .. 7909474 (+)
RNA-Seq Expression	Cp4.1LG14g09360
Synteny	Cp4.1LG14g09360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAAAACCCTTAACCCCTTCAGGTCAGTCGTTTCTTGCAGAATTTACAGATCTCTCATCTTCTTTCATGGCTTCCGCATGCCGAAGAATTGCGAGCAGAATCTCTCAATCTTCCTTTAGAACAGTTGTTCGTACAAATTCTCCACCCAAAGCTTCATCTTCTCCGTTCACTTTACCTTTCAATTCCACTGCACCATCTGTTCGCCGGTTCTCGCTCGCCAAGTAAGTCTGGTTATCCTTTCATTTCTTCTTGTTTTGTGTATCTTGTTGTGAGTTGTTTCAATATTTTGTTTGTTCTTTTTCAAAACTTCTTGATCTACTACTAGGTCCCCGTCGGAGCTGGGATGCGTGCAATCTCTTTTGCCTTTTCACAACGCGGTTGCTGGAGCGAGAATGATTTCATGTCTGAGTACAAATTCGAGGAGTTGTCGTGCGCTTTCTCAGGGTACTCTCTGCTGCACCTCTCCCAGCCTCTAACATGAAATATTGTACTTCCTTTTGAAGTGTGAGTAGCTTTTTTATGCATTATCTGCGGACATTTCCTTTTCTTGCGCTATAGTTGTCTTTCAGTGTCCTTGTGTTGGTATTTGCTGATTCTTGTTCTCTTGGATATTGGTGTATTGTTCCGAAAATCTTGGAGATTATGTAGGAAGTATCAACCATATTCCGTGATCACACATTTGATATTCTCGGGGGGTTTTCTTTGACGTCATTCTGTTATAAATTGGTGCAATTTTAGTTTGGAAGTTTAGAATACTGGATTGTTACCTATACTTTAGGAGGTTGTCGATCAACTTATGTAGAAGATGGGAGGCTAAGCAAGAATTTCAAAGTTAACCATCCCAGGAAGTAAAACCATGGTAGGTTTGGTCCTTGTGTTCAGTATCTAGTTTCGTTGTTTATTGGTTTCAACTTTTGTCCCCAGTTCGATTGGTCAATTTCTCGAGTAAAATTAGTTGTAGAACGATAAGGATTGAATGAATAGAAAGACTTTGGTTGTTGACTGGGGACCTTGAAACTGACTGGAGTATTTGGTTCCTGCAGGCACATAATATCGAATGTCTATATGCGAATCGATTATGATGCATAAAGAAATAGATTGGAAGTTTATGGAGCCTTCTGATTATGGTGCAGTGGATCGATTACAAGTACATTACTAATCATCTCATAGTAGTCCTAAAATGTCGATGATATTCAGATTTCTATCACTGTTAGGAACTAGTGGTCTCTGTCAGTTGTGGGTTGGCGCCACTTTTAATTTCCTTATGAAATGTTTGAGTCGCACACTTTCTCATTTAGTAGTAATCAATTCCTGAATCTTTAAATCTTAGGAGTTTCTCTTAGAATACTTTTTACTTGAAAATAAACCTCCAAATTTAAGAGAATGGAATGACAAATTAGGTTTGCCCATCGATCAGCTTCACTCTAGTTATCATCATCCTGAAAAAGAAATTATCTCAACAAGAGTCTGTTCTATTCTCATGGAGATCGTTACATTGGAGTAAAGGGATGATCCAGTCCTGTCCATAGTCTTAGTTTATTGTATATCCGCTATGTGAACAAAGCTTCGAATGTTCGGTGATCTGCATCATTTTTGTTTACATCATGTTTGTGACTCACAAATAATCTTATGATTGTTCTTATCATTCAACCCATTAATTTCTTTTATCAAATAATCTATATGACATAACTTCTCATTGCCCCAGATGCAATTGATGGTACGTGAGACATATTTGCTGTTTTTGAAGGTGGGTCAGTCACTCTATGCTTCACTAATCTAGAAATGTGATGTGTAAAGGTTCCGTAGATGTTAGTTCTGGGTTCCTTTGATTTACCTACTGTAAATGTAATGAAACCTTTACTCCCTTATTCCCATGCCAATTTCTGCATACCTCGATTAATCTTACCGAACAACTATCTAACTAAAGAAAAATCTATATTACCTGAGGATCATGTATCAGTTGGCATTGTTGACTCTACTGTATGGTTTTCTTTGCAACTGTAGAACTAGATGGCTGCATCAATTGCATTGAATGAGATACGATACGAGTCATATTGCAAGACTTCATTCCCAGTAGAATTTCTACCGATGTTCGTAGTCTGTTTTTTCTTATTTATTCGTATTCTGTGGCTGCAGAGCTGGGCTTATCAGTTCCAAGGTGACTTCTTTGGGATGATTGTTGCAGTGTCAAGGGGATGTCGGCCATGGTGTTGTGGATTTCATTTACGTACTGTGATCATTACTGCTCAATTTGGTTAACTAGTTTTGATTCTTCCAGACGACAGAATGTGTTGAAATAAGAATATAGTGATTCTAGTGCTTACCGGCAACTCAGGACATCATATTTTCGCCTTTGTTGCCATTGTTGTTTGATATTTGTCATACAATAGACATCATACTATTTTCCTTTGTTTGTGGTATAGTATTTCTTGTAGACAAATGGGGGCTGTTTTGCTTACTCCTAGACAATAAGGCATGCCATATTTTGTACTACGAGCTTAAGACATTCTAACACGAAAGGTTTGTTGGGAAATAATCTTGTACACGAAGAGATCGTTGGCCGGTAAATTGTCATTCATGATCTTAATTTTGTTGCCCACACATTGTC

mRNA sequence

CTAAAACCCTTAACCCCTTCAGGTCAGTCGTTTCTTGCAGAATTTACAGATCTCTCATCTTCTTTCATGGCTTCCGCATGCCGAAGAATTGCGAGCAGAATCTCTCAATCTTCCTTTAGAACAGTTGTTCGTACAAATTCTCCACCCAAAGCTTCATCTTCTCCGTTCACTTTACCTTTCAATTCCACTGCACCATCTGTTCGCCGGTTCTCGCTCGCCAAGTCCCCGTCGGAGCTGGGATGCGTGCAATCTCTTTTGCCTTTTCACAACGCGGTTGCTGGAGCGAGAATGATTTCATGTCTGAGTACAAATTCGAGGAGTTGTCGTGCGCTTTCTCAGGGTACTCTCTGCTGCACCTCTCCCAGCCTCTAACATGAAATATTGTACTTCCTTTTGAAGTGCACATAATATCGAATGTCTATATGCGAATCGATTATGATGCATAAAGAAATAGATTGGAAGTTTATGGAGCCTTCTGATTATGGTGCAGTGGATCGATTACAAAGCTGGGCTTATCAGTTCCAAGGTGACTTCTTTGGGATGATTGTTGCAGTGTCAAGGGGATGTCGGCCATGGTGTTGTGGATTTCATTTACGTACTGTGATCATTACTGCTCAATTTGGTTAACTAGTTTTGATTCTTCCAGACGACAGAATGTGTTGAAATAAGAATATAGTGATTCTAGTGCTTACCGGCAACTCAGGACATCATATTTTCGCCTTTGTTGCCATTGTTGTTTGATATTTGTCATACAATAGACATCATACTATTTTCCTTTGTTTGTGGTATAGTATTTCTTGTAGACAAATGGGGGCTGTTTTGCTTACTCCTAGACAATAAGGCATGCCATATTTTGTACTACGAGCTTAAGACATTCTAACACGAAAGGTTTGTTGGGAAATAATCTTGTACACGAAGAGATCGTTGGCCGGTAAATTGTCATTCATGATCTTAATTTTGTTGCCCACACATTGTC

Coding sequence (CDS)

CTAAAACCCTTAACCCCTTCAGGTCAGTCGTTTCTTGCAGAATTTACAGATCTCTCATCTTCTTTCATGGCTTCCGCATGCCGAAGAATTGCGAGCAGAATCTCTCAATCTTCCTTTAGAACAGTTGTTCGTACAAATTCTCCACCCAAAGCTTCATCTTCTCCGTTCACTTTACCTTTCAATTCCACTGCACCATCTGTTCGCCGGTTCTCGCTCGCCAAGTCCCCGTCGGAGCTGGGATGCGTGCAATCTCTTTTGCCTTTTCACAACGCGGTTGCTGGAGCGAGAATGATTTCATGTCTGAGTACAAATTCGAGGAGTTGTCGTGCGCTTTCTCAGGGTACTCTCTGCTGCACCTCTCCCAGCCTCTAA

Protein sequence

LKPLTPSGQSFLAEFTDLSSSFMASACRRIASRISQSSFRTVVRTNSPPKASSSPFTLPFNSTAPSVRRFSLAKSPSELGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPSL

Homology

[Close]

BLAST of Cp4.1LG14g09360 vs. ExPASy Swiss-Prot
Match: Q6NNL9 (Protein NONRESPONDING TO OXYLIPINS 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NOXY2 PE=1 SV=2)

HSP 1 Score: 52.8 bits (125), Expect = 3.3e-06
Identity = 40/102 (39.22%), Postives = 62/102 (60.78%), Query Frame = 0


Query: 23  MASACRRIASRISQSSFRTVVRTNS-PPKASSSPFTLPFNSTAPSVRRFSLAKSPSELGC 82
           MAS CR + S+ + S+FR+ +   S  PK++SS     F    PS      ++   +LG 
Sbjct: 1   MASRCRSL-SKPAFSAFRSAMNKPSIRPKSASS-----FIGVPPSP---GFSRPIGQLGS 60

Query: 83  VQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPSL 124
           +QSLLP ++AVA AR+ SCL  +S++ R+L+QG LC  +P +
Sbjct: 61  LQSLLPLYSAVASARLTSCLGIDSQNSRSLAQGMLCSANPGV 93

[Close]

BLAST of Cp4.1LG14g09360 vs. NCBI nr
Match: XP_023551885.1 (uncharacterized protein LOC111809723 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 189 bits (481), Expect = 5.00e-60
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 23  MASACRRIASRISQSSFRTVVRTNSPPKASSSPFTLPFNSTAPSVRRFSLAKSPSELGCV 82
           MASACRRIASRISQSSFRTVVRTNSPPKASSSPFTLPFNSTAPSVRRFSLAKSPSELGCV
Sbjct: 1   MASACRRIASRISQSSFRTVVRTNSPPKASSSPFTLPFNSTAPSVRRFSLAKSPSELGCV 60

Query: 83  QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPSL 123
           QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPSL
Sbjct: 61  QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPSL 101

[Close]

BLAST of Cp4.1LG14g09360 vs. NCBI nr
Match: XP_022923170.1 (uncharacterized protein LOC111430946 isoform X1 [Cucurbita moschata])

HSP 1 Score: 183 bits (464), Expect = 1.95e-57
Identity = 97/101 (96.04%), Postives = 99/101 (98.02%), Query Frame = 0


Query: 23  MASACRRIASRISQSSFRTVVRTNSPPKASSSPFTLPFNSTAPSVRRFSLAKSPSELGCV 82
           MASACRRIASRISQSS RTVVRTNSPPKASSSPFTLPFN TAPSVRRFSLA++PSELGCV
Sbjct: 1   MASACRRIASRISQSSIRTVVRTNSPPKASSSPFTLPFNCTAPSVRRFSLARAPSELGCV 60

Query: 83  QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPSL 123
           QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPSL
Sbjct: 61  QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPSL 101

[Close]

BLAST of Cp4.1LG14g09360 vs. NCBI nr
Match: XP_022965218.1 (uncharacterized protein LOC111465140 isoform X1 [Cucurbita maxima])

HSP 1 Score: 181 bits (460), Expect = 7.96e-57
Identity = 97/101 (96.04%), Postives = 98/101 (97.03%), Query Frame = 0


Query: 23  MASACRRIASRISQSSFRTVVRTNSPPKASSSPFTLPFNSTAPSVRRFSLAKSPSELGCV 82
           MASACRRIASRISQSS RTVVRTNSPPKASSSPFTLPFN TAPSVRRFSLA +PSELGCV
Sbjct: 1   MASACRRIASRISQSSIRTVVRTNSPPKASSSPFTLPFNCTAPSVRRFSLAGAPSELGCV 60

Query: 83  QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPSL 123
           QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPSL
Sbjct: 61  QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPSL 101

[Close]

BLAST of Cp4.1LG14g09360 vs. NCBI nr
Match: KAG7015719.1 (hypothetical protein SDJN02_23356, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 179 bits (455), Expect = 4.60e-56
Identity = 95/101 (94.06%), Postives = 98/101 (97.03%), Query Frame = 0


Query: 23  MASACRRIASRISQSSFRTVVRTNSPPKASSSPFTLPFNSTAPSVRRFSLAKSPSELGCV 82
           MASACRRIASRISQSS RTVVRTNSPPKASS PFTLPFN TAPSVRRFSLA++PSELGC+
Sbjct: 1   MASACRRIASRISQSSIRTVVRTNSPPKASSFPFTLPFNCTAPSVRRFSLARAPSELGCM 60

Query: 83  QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPSL 123
           QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPSL
Sbjct: 61  QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPSL 101

[Close]

BLAST of Cp4.1LG14g09360 vs. NCBI nr
Match: XP_023551887.1 (uncharacterized protein LOC111809723 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 171 bits (432), Expect = 1.30e-52
Identity = 91/94 (96.81%), Postives = 92/94 (97.87%), Query Frame = 0


Query: 23  MASACRRIASRISQSSFRTVVRTNSPPKASSSPFTLPFNSTAPSVRRFSLAKSPSELGCV 82
           MASACRRIASRISQSSFRTVVRTNSPPKASSSPFTLPFNSTAPSVRRFSLAKSPSELGCV
Sbjct: 1   MASACRRIASRISQSSFRTVVRTNSPPKASSSPFTLPFNSTAPSVRRFSLAKSPSELGCV 60

Query: 83  QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTL 116
           QSLLPFHNAVAGARMISCLSTNSRSCRALSQ  +
Sbjct: 61  QSLLPFHNAVAGARMISCLSTNSRSCRALSQDAI 94

[Close]

BLAST of Cp4.1LG14g09360 vs. ExPASy TrEMBL
Match: A0A6J1EAY8 (uncharacterized protein LOC111430946 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430946 PE=4 SV=1)

HSP 1 Score: 183 bits (464), Expect = 9.46e-58
Identity = 97/101 (96.04%), Postives = 99/101 (98.02%), Query Frame = 0


Query: 23  MASACRRIASRISQSSFRTVVRTNSPPKASSSPFTLPFNSTAPSVRRFSLAKSPSELGCV 82
           MASACRRIASRISQSS RTVVRTNSPPKASSSPFTLPFN TAPSVRRFSLA++PSELGCV
Sbjct: 1   MASACRRIASRISQSSIRTVVRTNSPPKASSSPFTLPFNCTAPSVRRFSLARAPSELGCV 60

Query: 83  QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPSL 123
           QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPSL
Sbjct: 61  QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPSL 101

[Close]

BLAST of Cp4.1LG14g09360 vs. ExPASy TrEMBL
Match: A0A6J1HN90 (uncharacterized protein LOC111465140 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465140 PE=4 SV=1)

HSP 1 Score: 181 bits (460), Expect = 3.85e-57
Identity = 97/101 (96.04%), Postives = 98/101 (97.03%), Query Frame = 0


Query: 23  MASACRRIASRISQSSFRTVVRTNSPPKASSSPFTLPFNSTAPSVRRFSLAKSPSELGCV 82
           MASACRRIASRISQSS RTVVRTNSPPKASSSPFTLPFN TAPSVRRFSLA +PSELGCV
Sbjct: 1   MASACRRIASRISQSSIRTVVRTNSPPKASSSPFTLPFNCTAPSVRRFSLAGAPSELGCV 60

Query: 83  QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPSL 123
           QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPSL
Sbjct: 61  QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPSL 101

[Close]

BLAST of Cp4.1LG14g09360 vs. ExPASy TrEMBL
Match: A0A6J1DMJ3 (uncharacterized protein LOC111021400 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021400 PE=4 SV=1)

HSP 1 Score: 165 bits (417), Expect = 1.38e-50
Identity = 89/101 (88.12%), Postives = 91/101 (90.10%), Query Frame = 0


Query: 23  MASACRRIASRISQSSFRTVVRTNSPPKASSSPFTLPFNSTAPSVRRFSLAKSPSELGCV 82
           MASAC RIASRISQSSFR  VRT SP K+ SSPF LP  STAPSVRRFSLA+SPSELGCV
Sbjct: 1   MASACHRIASRISQSSFRAAVRTQSPVKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCV 60

Query: 83  QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPSL 123
           QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSP L
Sbjct: 61  QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPGL 101

[Close]

BLAST of Cp4.1LG14g09360 vs. ExPASy TrEMBL
Match: A0A6J1E633 (uncharacterized protein LOC111430946 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430946 PE=4 SV=1)

HSP 1 Score: 164 bits (414), Expect = 3.72e-50
Identity = 87/91 (95.60%), Postives = 89/91 (97.80%), Query Frame = 0


Query: 23  MASACRRIASRISQSSFRTVVRTNSPPKASSSPFTLPFNSTAPSVRRFSLAKSPSELGCV 82
           MASACRRIASRISQSS RTVVRTNSPPKASSSPFTLPFN TAPSVRRFSLA++PSELGCV
Sbjct: 1   MASACRRIASRISQSSIRTVVRTNSPPKASSSPFTLPFNCTAPSVRRFSLARAPSELGCV 60

Query: 83  QSLLPFHNAVAGARMISCLSTNSRSCRALSQ 113
           QSLLPFHNAVAGARMISCLSTNSRSCRALSQ
Sbjct: 61  QSLLPFHNAVAGARMISCLSTNSRSCRALSQ 91

[Close]

BLAST of Cp4.1LG14g09360 vs. ExPASy TrEMBL
Match: A0A6J1HL39 (uncharacterized protein LOC111465140 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111465140 PE=4 SV=1)

HSP 1 Score: 162 bits (411), Expect = 1.00e-49
Identity = 87/94 (92.55%), Postives = 89/94 (94.68%), Query Frame = 0


Query: 23  MASACRRIASRISQSSFRTVVRTNSPPKASSSPFTLPFNSTAPSVRRFSLAKSPSELGCV 82
           MASACRRIASRISQSS RTVVRTNSPPKASSSPFTLPFN TAPSVRRFSLA +PSELGCV
Sbjct: 1   MASACRRIASRISQSSIRTVVRTNSPPKASSSPFTLPFNCTAPSVRRFSLAGAPSELGCV 60

Query: 83  QSLLPFHNAVAGARMISCLSTNSRSCRALSQGTL 116
           QSLLPFHNAVAGARMISCLSTNSRSCRALSQ  +
Sbjct: 61  QSLLPFHNAVAGARMISCLSTNSRSCRALSQDAI 94

[Close]

BLAST of Cp4.1LG14g09360 vs. TAIR 10
Match: AT4G17310.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47455.7); Has 164 Blast hits to 164 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 105.5 bits (262), Expect = 3.0e-23
Identity = 62/103 (60.19%), Postives = 73/103 (70.87%), Query Frame = 0


Query: 23  MASACRRIASRISQSSFRTVVR--TNSPPKASSSPFTLPFNSTAPSVRRFSLAKSPSELG 82
           MASACR++ +R S SS ++ +R  T S   ASS+ F LP   T    R FS ++ PSELG
Sbjct: 1   MASACRKLFNRASVSSLKSTLRSTTGSTSAASSAGFRLPSQPT----RHFSFSRCPSELG 60

Query: 83  CVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGTLCCTSPSL 124
           CVQSLLP H+ VA AR+ SCLST SRS RALSQGTLCCTSP L
Sbjct: 61  CVQSLLPLHSTVAAARLTSCLSTTSRSSRALSQGTLCCTSPDL 99

[Close]

BLAST of Cp4.1LG14g09360 vs. TAIR 10
Match: AT4G17310.2 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47455.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 87.0 bits (214), Expect = 1.1e-17
Identity = 53/93 (56.99%), Postives = 64/93 (68.82%), Query Frame = 0


Query: 23  MASACRRIASRISQSSFRTVVR--TNSPPKASSSPFTLPFNSTAPSVRRFSLAKSPSELG 82
           MASACR++ +R S SS ++ +R  T S   ASS+ F LP   T    R FS ++ PSELG
Sbjct: 1   MASACRKLFNRASVSSLKSTLRSTTGSTSAASSAGFRLPSQPT----RHFSFSRCPSELG 60

Query: 83  CVQSLLPFHNAVAGARMISCLSTNSRSCRALSQ 114
           CVQSLLP H+ VA AR+ SCLST SRS RALSQ
Sbjct: 61  CVQSLLPLHSTVAAARLTSCLSTTSRSSRALSQ 89

[Close]

BLAST of Cp4.1LG14g09360 vs. TAIR 10
Match: AT5G47455.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17310.1); Has 147 Blast hits to 147 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 147; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 85.1 bits (209), Expect = 4.3e-17
Identity = 50/97 (51.55%), Postives = 63/97 (64.95%), Query Frame = 0


Query: 29  RIASRISQSSFRTVVRT----------NSPPKASSSPFTLPFNSTAPSVRRFSLAKSPSE 88
           R  SR S SSF++ +R+          +SP  ASS+ F +P    A  + RFS ++ PSE
Sbjct: 4   RFMSRSSVSSFKSAIRSSFRNSPIGTGSSPAAASSAGFRIPSKPAASPLPRFSFSRCPSE 63

Query: 89  LGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGT 116
           LGCVQSLLP H+ VA AR+ SCLST SRS RAL+QGT
Sbjct: 64  LGCVQSLLPLHSTVAAARLTSCLSTTSRSSRALTQGT 100

[Close]

BLAST of Cp4.1LG14g09360 vs. TAIR 10
Match: AT5G47455.6 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 85.1 bits (209), Expect = 4.3e-17
Identity = 50/97 (51.55%), Postives = 63/97 (64.95%), Query Frame = 0


Query: 29  RIASRISQSSFRTVVRT----------NSPPKASSSPFTLPFNSTAPSVRRFSLAKSPSE 88
           R  SR S SSF++ +R+          +SP  ASS+ F +P    A  + RFS ++ PSE
Sbjct: 4   RFMSRSSVSSFKSAIRSSFRNSPIGTGSSPAAASSAGFRIPSKPAASPLPRFSFSRCPSE 63

Query: 89  LGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGT 116
           LGCVQSLLP H+ VA AR+ SCLST SRS RAL+QGT
Sbjct: 64  LGCVQSLLPLHSTVAAARLTSCLSTTSRSSRALTQGT 100

[Close]

BLAST of Cp4.1LG14g09360 vs. TAIR 10
Match: AT5G47455.7 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17310.1); Has 147 Blast hits to 147 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 147; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 85.1 bits (209), Expect = 4.3e-17
Identity = 50/97 (51.55%), Postives = 63/97 (64.95%), Query Frame = 0


Query: 29  RIASRISQSSFRTVVRT----------NSPPKASSSPFTLPFNSTAPSVRRFSLAKSPSE 88
           R  SR S SSF++ +R+          +SP  ASS+ F +P    A  + RFS ++ PSE
Sbjct: 4   RFMSRSSVSSFKSAIRSSFRNSPIGTGSSPAAASSAGFRIPSKPAASPLPRFSFSRCPSE 63

Query: 89  LGCVQSLLPFHNAVAGARMISCLSTNSRSCRALSQGT 116
           LGCVQSLLP H+ VA AR+ SCLST SRS RAL+QGT
Sbjct: 64  LGCVQSLLPLHSTVAAARLTSCLSTTSRSSRALTQGT 100

The following BLAST results are available for this feature:

BLAST of Cp4.1LG14g09360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NNL9	3.3e-06	39.22	Protein NONRESPONDING TO OXYLIPINS 2, mitochondrial OS=Arabidopsis thaliana OX=3...	[more]

BLAST of Cp4.1LG14g09360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023551885.1	5.00e-60	100.00	uncharacterized protein LOC111809723 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022923170.1	1.95e-57	96.04	uncharacterized protein LOC111430946 isoform X1 [Cucurbita moschata]	[more]
XP_022965218.1	7.96e-57	96.04	uncharacterized protein LOC111465140 isoform X1 [Cucurbita maxima]	[more]
KAG7015719.1	4.60e-56	94.06	hypothetical protein SDJN02_23356, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023551887.1	1.30e-52	96.81	uncharacterized protein LOC111809723 isoform X3 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cp4.1LG14g09360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EAY8	9.46e-58	96.04	uncharacterized protein LOC111430946 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1HN90	3.85e-57	96.04	uncharacterized protein LOC111465140 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1DMJ3	1.38e-50	88.12	uncharacterized protein LOC111021400 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1E633	3.72e-50	95.60	uncharacterized protein LOC111430946 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1HL39	1.00e-49	92.55	uncharacterized protein LOC111465140 isoform X3 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Cp4.1LG14g09360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17310.1	3.0e-23	60.19	unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPR...	[more]
AT4G17310.2	1.1e-17	56.99	unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPR...	[more]
AT5G47455.1	4.3e-17	51.55	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G47455.6	4.3e-17	51.55	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G47455.7	4.3e-17	51.55	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33156:SF9	OS02G0658300 PROTEIN	coord: 23..122
IPR043459	NFD6/NOXY2-like	PANTHER	PTHR33156	OS02G0230000 PROTEIN	coord: 23..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG14g09360.1	Cp4.1LG14g09360.1	mRNA