Cp4.1LG14g09280 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAACTTGTGAATCTGGAGGAAGCTGCTGCGTTGGAGAATATTAAGCTTCATCTTCTCGGCGAACTCTCTCCGTTGCCGAGGAATTTGGCTTCTGATGATAGCCTTTGCGTCACGTCGTCGGATCGTTCGGTGTGTTCCGATGCTTCCACGACGTCTAACTGTCCTCTTACGATCACTGATTACTTCGATTCGGATGATTTTTTCGAATTTTCCTCTGATTTCATCCGAGAGGAGTCGTCGATTTTATCAAACGACGATTTCTTCGGAGTCGAGATGAAACCTAACGTCATCGACCTCACGACGCCTAAATCAGAGGAGTTTCTCGAATTCGAGGCGAAACCTAATGTTTTTGAGGATTTGAGTTTGAGTTCGAGTTCTCTGTACAGTAATAGTTCATCTGAAGTCGAATCTAAGACGAAATTGATCGGTCGTGTGACGAATTCGAATAGGAAACGATCGAATTTGAAAATCTCGCTTCCGAACAAGACTACGCAGTGGATTAATTTTGACGCGGCGGAGAAGAAGAATCCGGTTGTGGTGCATAGGAGTAAAGATCTCGAGGCGGAGAAGAAGGTTCATTACAGAGGCGTTCGACAGAGGCCTTGGGGAAAGTTCGCGGCCGAGATTAGGGATCCGAATCGTCGTGGATCTAGAGTCTGGCTTGGAACTTTTGAGACCGCTATTGAAGCGGCGAGAGCGTACGATCGTGCTGCCTTTAAACTTCGAGGTTCCAAAGCGATTCTCAACTTTCCGTTGGAAGCTGCGAACTCTTACTACTCGGAGCCGCTCGTCGCCGGGAAGCGGCGGCGGGAGGAGGAAGTAGAAGAGGTAGTCGAGGCGGTGCCGGTGAAGAAAGAGAAAACGGAGGAGATGAACCTCCCGGCCGCCGACGTCAGTTTCATAGAGGATATGCCGCTAACGCCGTCGTCATGGTCGATGGTATGGGACGGGGAGTCGAAGGGACTTCTCAATATTCCGCCGTTATCGCCGTTATCGCCGTTCGGTTTTCCACAGCTTATGGTTGTATAA ATGGAACTTGTGAATCTGGAGGAAGCTGCTGCGTTGGAGAATATTAAGCTTCATCTTCTCGGCGAACTCTCTCCGTTGCCGAGGAATTTGGCTTCTGATGATAGCCTTTGCGTCACGTCGTCGGATCGTTCGGTGTGTTCCGATGCTTCCACGACGTCTAACTGTCCTCTTACGATCACTGATTACTTCGATTCGGATGATTTTTTCGAATTTTCCTCTGATTTCATCCGAGAGGAGTCGTCGATTTTATCAAACGACGATTTCTTCGGAGTCGAGATGAAACCTAACGTCATCGACCTCACGACGCCTAAATCAGAGGAGTTTCTCGAATTCGAGGCGAAACCTAATGTTTTTGAGGATTTGAGTTTGAGTTCGAGTTCTCTGTACAGTAATAGTTCATCTGAAGTCGAATCTAAGACGAAATTGATCGGTCGTGAGGAAGTAGAAGAGGTAGTCGAGGCGGTGCCGGTGAAGAAAGAGAAAACGGAGGAGATGAACCTCCCGGCCGCCGACGTCAGTTTCATAGAGGATATGCCGCTAACGCCGTCGTCATGGTCGATGGTATGGGACGGGGAGTCGAAGGGACTTCTCAATATTCCGCCGTTATCGCCGTTATCGCCGTTCGGTTTTCCACAGCTTATGGTTGTATAA ATGGAACTTGTGAATCTGGAGGAAGCTGCTGCGTTGGAGAATATTAAGCTTCATCTTCTCGGCGAACTCTCTCCGTTGCCGAGGAATTTGGCTTCTGATGATAGCCTTTGCGTCACGTCGTCGGATCGTTCGGTGTGTTCCGATGCTTCCACGACGTCTAACTGTCCTCTTACGATCACTGATTACTTCGATTCGGATGATTTTTTCGAATTTTCCTCTGATTTCATCCGAGAGGAGTCGTCGATTTTATCAAACGACGATTTCTTCGGAGTCGAGATGAAACCTAACGTCATCGACCTCACGACGCCTAAATCAGAGGAGTTTCTCGAATTCGAGGCGAAACCTAATGTTTTTGAGGATTTGAGTTTGAGTTCGAGTTCTCTGTACAGTAATAGTTCATCTGAAGTCGAATCTAAGACGAAATTGATCGGTCGTGAGGAAGTAGAAGAGGTAGTCGAGGCGGTGCCGGTGAAGAAAGAGAAAACGGAGGAGATGAACCTCCCGGCCGCCGACGTCAGTTTCATAGAGGATATGCCGCTAACGCCGTCGTCATGGTCGATGGTATGGGACGGGGAGTCGAAGGGACTTCTCAATATTCCGCCGTTATCGCCGTTATCGCCGTTCGGTTTTCCACAGCTTATGGTTGTATAA MELVNLEEAAALENIKLHLLGELSPLPRNLASDDSLCVTSSDRSVCSDASTTSNCPLTITDYFDSDDFFEFSSDFIREESSILSNDDFFGVEMKPNVIDLTTPKSEEFLEFEAKPNVFEDLSLSSSSLYSNSSSEVESKTKLIGREEVEEVVEAVPVKKEKTEEMNLPAADVSFIEDMPLTPSSWSMVWDGESKGLLNIPPLSPLSPFGFPQLMVV Homology
BLAST of Cp4.1LG14g09280 vs. ExPASy Swiss-Prot
Match: Q40478 (Ethylene-responsive transcription factor 5 OS=Nicotiana tabacum OX=4097 GN=ERF5 PE=2 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 1.8e-07 Identity = 34/76 (44.74%), Postives = 47/76 (61.84%), Query Frame = 0
BLAST of Cp4.1LG14g09280 vs. ExPASy Swiss-Prot
Match: Q9LW48 (Ethylene-responsive transcription factor 5 OS=Nicotiana sylvestris OX=4096 GN=ERF5 PE=2 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 4.1e-04 Identity = 33/90 (36.67%), Postives = 50/90 (55.56%), Query Frame = 0
BLAST of Cp4.1LG14g09280 vs. NCBI nr
Match: XP_023552805.1 (ethylene-responsive transcription factor 5-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 352 bits (903), Expect = 3.98e-119 Identity = 216/343 (62.97%), Postives = 216/343 (62.97%), Query Frame = 0
BLAST of Cp4.1LG14g09280 vs. NCBI nr
Match: XP_022923447.1 (ethylene-responsive transcription factor 5-like [Cucurbita moschata]) HSP 1 Score: 343 bits (879), Expect = 1.76e-115 Identity = 211/343 (61.52%), Postives = 213/343 (62.10%), Query Frame = 0
BLAST of Cp4.1LG14g09280 vs. NCBI nr
Match: KAG6577668.1 (Ethylene-responsive transcription factor 5, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015705.1 Ethylene-responsive transcription factor 5, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 332 bits (851), Expect = 3.15e-111 Identity = 207/343 (60.35%), Postives = 209/343 (60.93%), Query Frame = 0
BLAST of Cp4.1LG14g09280 vs. NCBI nr
Match: XP_022965093.1 (ethylene-responsive transcription factor 5 [Cucurbita maxima]) HSP 1 Score: 328 bits (842), Expect = 7.33e-110 Identity = 203/343 (59.18%), Postives = 209/343 (60.93%), Query Frame = 0
BLAST of Cp4.1LG14g09280 vs. NCBI nr
Match: XP_038903436.1 (ethylene-responsive transcription factor 5-like [Benincasa hispida]) HSP 1 Score: 226 bits (575), Expect = 1.63e-69 Identity = 158/343 (46.06%), Postives = 178/343 (51.90%), Query Frame = 0
BLAST of Cp4.1LG14g09280 vs. ExPASy TrEMBL
Match: A0A6J1E649 (ethylene-responsive transcription factor 5-like OS=Cucurbita moschata OX=3662 GN=LOC111431140 PE=4 SV=1) HSP 1 Score: 343 bits (879), Expect = 8.53e-116 Identity = 211/343 (61.52%), Postives = 213/343 (62.10%), Query Frame = 0
BLAST of Cp4.1LG14g09280 vs. ExPASy TrEMBL
Match: A0A6J1HMU9 (ethylene-responsive transcription factor 5 OS=Cucurbita maxima OX=3661 GN=LOC111465058 PE=4 SV=1) HSP 1 Score: 328 bits (842), Expect = 3.55e-110 Identity = 203/343 (59.18%), Postives = 209/343 (60.93%), Query Frame = 0
BLAST of Cp4.1LG14g09280 vs. ExPASy TrEMBL
Match: A0A6J1GES4 (ethylene-responsive transcription factor 5-like OS=Cucurbita moschata OX=3662 GN=LOC111453520 PE=4 SV=1) HSP 1 Score: 223 bits (569), Expect = 1.07e-68 Identity = 163/355 (45.92%), Postives = 186/355 (52.39%), Query Frame = 0
BLAST of Cp4.1LG14g09280 vs. ExPASy TrEMBL
Match: A0A6J1KZ82 (ethylene-responsive transcription factor 5-like OS=Cucurbita maxima OX=3661 GN=LOC111498436 PE=4 SV=1) HSP 1 Score: 216 bits (550), Expect = 7.51e-66 Identity = 160/354 (45.20%), Postives = 183/354 (51.69%), Query Frame = 0
BLAST of Cp4.1LG14g09280 vs. ExPASy TrEMBL
Match: A0A0A0L465 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G018320 PE=4 SV=1) HSP 1 Score: 212 bits (539), Expect = 2.56e-64 Identity = 156/346 (45.09%), Postives = 178/346 (51.45%), Query Frame = 0
BLAST of Cp4.1LG14g09280 vs. TAIR 10
Match: AT5G61600.1 (ethylene response factor 104 ) HSP 1 Score: 45.1 bits (105), Expect = 8.6e-05 Identity = 27/65 (41.54%), Postives = 36/65 (55.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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