Cp4.1LG14g08630 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACCGACACGTGTCCACCATATCAAATCTGGAACCATCGATTTCAAGGACGAACGTCGCTCTCTCGTTTTTCTTTGGCCTTCAATTTCCCAGTCGGTGAATCTCCGGGGTTCCCTTTTTCCCTTCGTGAAATTCTTGCTCCCGGAAATTTCGTGGAGGCGATCGTGTTTGAATTTTTTTAGTCTACCGGAGTAATTTTGTAGAACGCTTGCGAATTTCTACGTATCTTTTTCGCTCAAGGTACCGCTTCTCTCTTTAACAGGATCGGATTATCTAGGGTTTGACATGTTTGTAAAACTTGAATGCTGTTCATCTTGATGTCTACGGTTCTTTTTTGGCTTTGGTTTCTTTGGAAGTATGAGGAGTTTTTTTTGTCGCTGTGTTATTCGTTGTTGGTTGCTTTTGTTTATTATTATTTTTCTTTTGGTTTTTTATTCGGAATTTCAGTTTTTGTTATCGCTTTTGCTAGTCTGATTATATATAGTGGAAATGGTGGATTTTATGTTTTTTTTATTTATTTAATTTGATTATGGTTTTTGTTGCATCAATATCAATTATGTTCGATTTAGGAGAATCCTGGAGGAATTTTCCTTATCGTTGAGTTGCTTGATTATTTAGTTTGAGCTTTGCCTTTATATCAAGCCGATCATGCTGAATCTTTCTTCGTTGGCTTGGTTTAAGTTCTTGATTATCATGCCTTGTCTTTCTTCAAGGGTCCTTTTGTGAACTGTAACGATGCATAGAAAGAGCAGAGGGGGCAGTGATGAATTTTTTGATTTTGGTGACCCCTTTGCTGGGTTTGGAAGCTTTCCAGGTCAAGGAAGCTTAATTTCTGGTTTCTTTGGCGGAAGGGATCCATTTGATGATCCTTTCTTCAGAAGTCCATTTGGAAGCATGTTTGATTCGAGCTTCTCTGGTGGTCCTGGAATGCCTTTTGCAAGCATGCATCCATCTGGATTCCTTGATCATCAGGCCCCCGAGCCTAAAAGGCCGAGAGGCCCGATTATTGAGGAAATAAATTCAGATGATGAAAAAGAAGCAGGAAACGGGAGTAAAAATCCAAAGAATTCATCCAAAGAGCCTCTTGTTGAAGACCCTGATGATGAAGGTGAGTGTGAGACTTGTCTGGATTGTTGTGTTTGTCATTCTTTCTTTGCTTGCTTTTATGCATTTCAGTTGCAATCTGTAATGCCGAACTGTTTGTTTCCTTTCTTGTTGTTACAGAGAATGGGAAAAGACAGTTGCAGCGCATGGATCATCACAGTGGATCAAATCACAGACATATCCGACCTCCAACTAATAGCTTCACATTTCAGAGCTCCTCTGTAACTTATGGAAGCTCGAATGGGACATATTATACTTCATCAAGAACAAGAAGGGCAGGAAGTGATGGTGTAAGTGAAACTTAAATGCCATTAAGGAGTTGATTCTTCTAGGAAGAATTCTTTCTTCATTTGTCTATTTCTTTTTGTAAATAGGTGGTTTTTGAAGAAAGCAAGGAAGCTGATACGGCAAGCAGACAGGCAACCCATAAAGTTTCAAGAGGACTCCATAATAAGGTATCGACGAAGAAAAGATTTGACCCCTTGAGATTAATATCCTCCCATTTGTACCCGTTAATTATTTGTTTGATACAACTTGTGAATGTGTTTCTTTTAGGGTCATTCAGTTACAAGGAAACTGAACCCTGATGGTAAGGTGGATACCATGCAAACTTTGCATAATCTTAATGGAGGTATGTAACTATTCATGCCCAATTGTTTTTGTGTTGGTGTAAACTGGATGCGTACGATGGCCAGCGTTATGTTGTAAATCTACAGATGAGCTAGACGGTTTCGAAAATGCTTGGGCAAGGAATGCAGGAAGTTTGCCTGGGTGGCCTGGGAGTACAAACGGCTTTGATAGTATTGGTATTTTCTAATACAACTTCGATCAAGTTTTACTTAATCTGATTCTTTTGTCTGCCTTCCTACCGGTACTTTTATTTCGTAGAACTTTAGTACTTAGGCTCATGATGGTGATGGTTTATACAATGAAAGGACTTGAAGGTTCAAATGACCAAATACCCTTATAATACTTGGTGGATGGGTTTAAGCAAATTACCCAAATGGAAGACGGGAGAATATAATCTAAGTAGCTCGTTATTGAATGAAAAAATCTACAGGAATGGTAGTTAGGGAACTGTGTGCCCACCAAACATTGGATGAGATCAGAAATCTACAGGAATGGTATTTTTTTGGTCACAAGTGCGTCTGGCTGACTAAAATCTTTCCTAATTCTATTAGTTTTAAGTTGCACAGGAACATTTGTCTGACCATTTGCCTCTTGTAACTGATATATGTTTAGGAGAATAAGTGAAAATATAAGAACAGAAGCCTCTTCCCTAGTGGCTTTTAGTAACGAAGTGTAAACAGTTTAAGGAAACTAGTCTGCAAAACTATCACTATGGAACCAAATAGCTGCCTATAATTTTATGATGGGTGCTAGCAAGTGCATATGATGCTAATTTCATTCCACCCCATGGACAGCTGGTGGCATTCGCCAAAACAGTCAAACAAGCAGAGGTGGGTTGGCACTTCCCTCCACTCAGCATCATCCTCAAGTGACTGGAAGGACAGCCGTGGAAGGCTGGAGTAACCCGGGTTCCTCGCGCGCACAGCAAGTGAACAGGAGTAGGAAAGACGCAAGGTACAGGAGTGCCTAAACTTACAAAATTATAGACTGGATTCAGAACGATCTCATGCCTCTTTTGCGAATCCATTCTTCCATTTCAGATGGATCTCATGCCCTTATCTGTGTGTAGTTCATAATTACTTACCCCTTGCATATACTGTGGAACGATATAGTTTCTGTTGACGAGTATTTCATCTTATCTTTTTTCACGACCAGCAGTTCTCCTGATGTTATTTGATGAATCTGAGAGTGGTTTTATTAGAAAAAAATGCCAATTTTAGAGATTGAATTAAGATACTGACTATATTTAGGGCCCGTTGCTGTTGACGCTGTTCTTTTTGGCGTTGTTTAAACGTGTCGTGTAAGAAATGATCATGT ACCGACACGTGTCCACCATATCAAATCTGGAACCATCGATTTCAAGGACGAACGTCGCTCTCTCGTTTTTCTTTGGCCTTCAATTTCCCAGTCGGTGAATCTCCGGGGTTCCCTTTTTCCCTTCGTGAAATTCTTGCTCCCGGAAATTTCGTGGAGGCGATCGTGTTTGAATTTTTTTAGTCTACCGGAGTAATTTTGTAGAACGCTTGCGAATTTCTACGTATCTTTTTCGCTCAAGGGTCCTTTTGTGAACTGTAACGATGCATAGAAAGAGCAGAGGGGGCAGTGATGAATTTTTTGATTTTGGTGACCCCTTTGCTGGGTTTGGAAGCTTTCCAGGTCAAGGAAGCTTAATTTCTGGTTTCTTTGGCGGAAGGGATCCATTTGATGATCCTTTCTTCAGAAGTCCATTTGGAAGCATGTTTGATTCGAGCTTCTCTGGTGGTCCTGGAATGCCTTTTGCAAGCATGCATCCATCTGGATTCCTTGATCATCAGGCCCCCGAGCCTAAAAGGCCGAGAGGCCCGATTATTGAGGAAATAAATTCAGATGATGAAAAAGAAGCAGGAAACGGGAGTAAAAATCCAAAGAATTCATCCAAAGAGCCTCTTGTTGAAGACCCTGATGATGAAGAGAATGGGAAAAGACAGTTGCAGCGCATGGATCATCACAGTGGATCAAATCACAGACATATCCGACCTCCAACTAATAGCTTCACATTTCAGAGCTCCTCTGTAACTTATGGAAGCTCGAATGGGACATATTATACTTCATCAAGAACAAGAAGGGCAGGAAGTGATGGTGTGGTTTTTGAAGAAAGCAAGGAAGCTGATACGGCAAGCAGACAGGCAACCCATAAAGTTTCAAGAGGACTCCATAATAAGGGTCATTCAGTTACAAGGAAACTGAACCCTGATGGTAAGGTGGATACCATGCAAACTTTGCATAATCTTAATGGAGATGAGCTAGACGGTTTCGAAAATGCTTGGGCAAGGAATGCAGGAAGTTTGCCTGGGTGGCCTGGGAGTACAAACGGCTTTGATAGTATTGCTGGTGGCATTCGCCAAAACAGTCAAACAAGCAGAGGTGGGTTGGCACTTCCCTCCACTCAGCATCATCCTCAAGTGACTGGAAGGACAGCCGTGGAAGGCTGGAGTAACCCGGGTTCCTCGCGCGCACAGCAAGTGAACAGGAGTAGGAAAGACGCAAGGTACAGGAGTGCCTAAACTTACAAAATTATAGACTGGATTCAGAACGATCTCATGCCTCTTTTGCGAATCCATTCTTCCATTTCAGATGGATCTCATGCCCTTATCTGTGTGTAGTTCATAATTACTTACCCCTTGCATATACTGTGGAACGATATAGTTTCTGTTGACGAGTATTTCATCTTATCTTTTTTCACGACCAGCAGTTCTCCTGATGTTATTTGATGAATCTGAGAGTGGTTTTATTAGAAAAAAATGCCAATTTTAGAGATTGAATTAAGATACTGACTATATTTAGGGCCCGTTGCTGTTGACGCTGTTCTTTTTGGCGTTGTTTAAACGTGTCGTGTAAGAAATGATCATGT ATGCATAGAAAGAGCAGAGGGGGCAGTGATGAATTTTTTGATTTTGGTGACCCCTTTGCTGGGTTTGGAAGCTTTCCAGGTCAAGGAAGCTTAATTTCTGGTTTCTTTGGCGGAAGGGATCCATTTGATGATCCTTTCTTCAGAAGTCCATTTGGAAGCATGTTTGATTCGAGCTTCTCTGGTGGTCCTGGAATGCCTTTTGCAAGCATGCATCCATCTGGATTCCTTGATCATCAGGCCCCCGAGCCTAAAAGGCCGAGAGGCCCGATTATTGAGGAAATAAATTCAGATGATGAAAAAGAAGCAGGAAACGGGAGTAAAAATCCAAAGAATTCATCCAAAGAGCCTCTTGTTGAAGACCCTGATGATGAAGAGAATGGGAAAAGACAGTTGCAGCGCATGGATCATCACAGTGGATCAAATCACAGACATATCCGACCTCCAACTAATAGCTTCACATTTCAGAGCTCCTCTGTAACTTATGGAAGCTCGAATGGGACATATTATACTTCATCAAGAACAAGAAGGGCAGGAAGTGATGGTGTGGTTTTTGAAGAAAGCAAGGAAGCTGATACGGCAAGCAGACAGGCAACCCATAAAGTTTCAAGAGGACTCCATAATAAGGGTCATTCAGTTACAAGGAAACTGAACCCTGATGGTAAGGTGGATACCATGCAAACTTTGCATAATCTTAATGGAGATGAGCTAGACGGTTTCGAAAATGCTTGGGCAAGGAATGCAGGAAGTTTGCCTGGGTGGCCTGGGAGTACAAACGGCTTTGATAGTATTGCTGGTGGCATTCGCCAAAACAGTCAAACAAGCAGAGGTGGGTTGGCACTTCCCTCCACTCAGCATCATCCTCAAGTGACTGGAAGGACAGCCGTGGAAGGCTGGAGTAACCCGGGTTCCTCGCGCGCACAGCAAGTGAACAGGAGTAGGAAAGACGCAAGGTACAGGAGTGCCTAA MHRKSRGGSDEFFDFGDPFAGFGSFPGQGSLISGFFGGRDPFDDPFFRSPFGSMFDSSFSGGPGMPFASMHPSGFLDHQAPEPKRPRGPIIEEINSDDEKEAGNGSKNPKNSSKEPLVEDPDDEENGKRQLQRMDHHSGSNHRHIRPPTNSFTFQSSSVTYGSSNGTYYTSSRTRRAGSDGVVFEESKEADTASRQATHKVSRGLHNKGHSVTRKLNPDGKVDTMQTLHNLNGDELDGFENAWARNAGSLPGWPGSTNGFDSIAGGIRQNSQTSRGGLALPSTQHHPQVTGRTAVEGWSNPGSSRAQQVNRSRKDARYRSA Homology
BLAST of Cp4.1LG14g08630 vs. NCBI nr
Match: XP_023553040.1 (uncharacterized protein LOC111810555 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 643 bits (1659), Expect = 9.35e-233 Identity = 321/321 (100.00%), Postives = 321/321 (100.00%), Query Frame = 0
BLAST of Cp4.1LG14g08630 vs. NCBI nr
Match: XP_022923506.1 (uncharacterized protein LOC111431180 [Cucurbita moschata]) HSP 1 Score: 623 bits (1607), Expect = 7.91e-225 Identity = 312/321 (97.20%), Postives = 312/321 (97.20%), Query Frame = 0
BLAST of Cp4.1LG14g08630 vs. NCBI nr
Match: KAG7015642.1 (hypothetical protein SDJN02_23279 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 620 bits (1598), Expect = 1.86e-223 Identity = 311/321 (96.88%), Postives = 311/321 (96.88%), Query Frame = 0
BLAST of Cp4.1LG14g08630 vs. NCBI nr
Match: XP_022965104.1 (uncharacterized protein LOC111465069 [Cucurbita maxima]) HSP 1 Score: 610 bits (1574), Expect = 8.47e-220 Identity = 307/321 (95.64%), Postives = 309/321 (96.26%), Query Frame = 0
BLAST of Cp4.1LG14g08630 vs. NCBI nr
Match: KAG6577594.1 (hypothetical protein SDJN03_25168, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 548 bits (1411), Expect = 3.62e-195 Identity = 277/291 (95.19%), Postives = 277/291 (95.19%), Query Frame = 0
BLAST of Cp4.1LG14g08630 vs. ExPASy TrEMBL
Match: A0A6J1E6Z6 (uncharacterized protein LOC111431180 OS=Cucurbita moschata OX=3662 GN=LOC111431180 PE=3 SV=1) HSP 1 Score: 623 bits (1607), Expect = 3.83e-225 Identity = 312/321 (97.20%), Postives = 312/321 (97.20%), Query Frame = 0
BLAST of Cp4.1LG14g08630 vs. ExPASy TrEMBL
Match: A0A6J1HQ28 (uncharacterized protein LOC111465069 OS=Cucurbita maxima OX=3661 GN=LOC111465069 PE=3 SV=1) HSP 1 Score: 610 bits (1574), Expect = 4.10e-220 Identity = 307/321 (95.64%), Postives = 309/321 (96.26%), Query Frame = 0
BLAST of Cp4.1LG14g08630 vs. ExPASy TrEMBL
Match: A0A1S3BLG1 (uncharacterized protein LOC103490935 OS=Cucumis melo OX=3656 GN=LOC103490935 PE=3 SV=1) HSP 1 Score: 527 bits (1358), Expect = 3.34e-187 Identity = 265/321 (82.55%), Postives = 284/321 (88.47%), Query Frame = 0
BLAST of Cp4.1LG14g08630 vs. ExPASy TrEMBL
Match: A0A5D3D7I9 (Myeloid leukemia factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G001280 PE=3 SV=1) HSP 1 Score: 522 bits (1344), Expect = 8.72e-185 Identity = 261/318 (82.08%), Postives = 282/318 (88.68%), Query Frame = 0
BLAST of Cp4.1LG14g08630 vs. ExPASy TrEMBL
Match: A0A0A0L4F0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G036450 PE=3 SV=1) HSP 1 Score: 517 bits (1332), Expect = 2.63e-183 Identity = 263/321 (81.93%), Postives = 285/321 (88.79%), Query Frame = 0
BLAST of Cp4.1LG14g08630 vs. TAIR 10
Match: AT4G22740.1 (glycine-rich protein ) HSP 1 Score: 229.9 bits (585), Expect = 2.8e-60 Identity = 159/337 (47.18%), Postives = 190/337 (56.38%), Query Frame = 0
BLAST of Cp4.1LG14g08630 vs. TAIR 10
Match: AT4G22740.2 (glycine-rich protein ) HSP 1 Score: 229.9 bits (585), Expect = 2.8e-60 Identity = 159/337 (47.18%), Postives = 190/337 (56.38%), Query Frame = 0
BLAST of Cp4.1LG14g08630 vs. TAIR 10
Match: AT2G45380.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT4G34070.1); Has 171 Blast hits to 170 proteins in 31 species: Archae - 2; Bacteria - 0; Metazoa - 68; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). ) HSP 1 Score: 169.9 bits (429), Expect = 3.4e-42 Identity = 123/297 (41.41%), Postives = 162/297 (54.55%), Query Frame = 0
BLAST of Cp4.1LG14g08630 vs. TAIR 10
Match: AT2G45380.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G22740.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 119.4 bits (298), Expect = 5.3e-27 Identity = 78/185 (42.16%), Postives = 106/185 (57.30%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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