Cp4.1LG14g08410 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG14g08410
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionF-box protein SKIP23-like
LocationCp4.1LG14: 6932511 .. 6933659 (-)
RNA-Seq ExpressionCp4.1LG14g08410
SyntenyCp4.1LG14g08410
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAATTCAAAATTTAGAGATTGGACTGCACTTGACTACGATGTTCTTGGTGTGATTCTCAACAAAATGGTGTCTCTCTATGATTATCTCCAATTCAGCATTGTATGTAAGTCTTGGTATTTTGTTGCATTACGACACAAACACCAACGATCCATAATTACCTCCAAGTTTCCTCAACTGCCGATGCTCATCGTTCCCTCGAAAGATGGTCTTGAAAAGCAGCATTGCTTATACGACCCCAGAAAAAATAGAACCCGTCCTGTTGACTTCAAATTTTGCTTCAACAAAAGGTGTTGTGGCTCCTCTTTTGGTTGGTTGATCATGTGTGAAGAGACACTTGATCTTACTTTATTCAACCCTTTTTCTGGGACTGTGATTTGTCTTCCTTCCATTTTCATAGAGGATGAACCTGATTATGCCCCAGACCGCATAGTTAAAGCTATATTAACCAAAGATCCATGGTTATATCCAAACGATTATATGGTTGTAGCTATCTATAGTTCATATTCAAGGTTGTGCCTTATGAGAGCAAATGATAAGAGTTGGACGTATTCGTACCCAGAACCAAATATTCCTTTTAAGGATATTAATGTTTCTAGTGATACTTTATATGCTACGGAAAATAATATGATGGTTTGGAAAGTTGAAGTTAAGAATAGAGATGATGAAAGTTCATCGATTTCTATTTCTTTAAAGATGGTCCACGCTAAAAGAACCAATGATTTCGTTGTATCCTATATTACAGAGTCTTCAAAAGGAGAGCTTTTGTTAGTTTTGAGGTCAATATCTGAAGAGGATTCACAATTGGAGACTACCAAGTTTAAAGTCTACAAACTTATTGATGAGTGTGAAAATGACATGCTAAGGGCCGTAAAGTTGAAGAGTTTAGATGGAGATGCTATGTTTATCGGAGACTCTCAATCCATCTGTGTATCAACTAAGTATTTTCCTAAATGTTTACCAAATTGTATATATTTTATCAATGGTTACTACAATTATATTCCGAATTTAGAACAAGATTCAGGGATATTCAACCTAGAAGATAAAAGATTTGCGAACCATTACATACGAGATCCTGCACACAAGAATTTACCTCAACCCATTTGGATCATTCCAACAATATGTTCCAAAGATTTTGAAGATTAA

mRNA sequence

ATGGAAAATTCAAAATTTAGAGATTGGACTGCACTTGACTACGATGTTCTTGGTGTGATTCTCAACAAAATGGTGTCTCTCTATGATTATCTCCAATTCAGCATTGTATGTAAGTCTTGGTATTTTGTTGCATTACGACACAAACACCAACGATCCATAATTACCTCCAAGTTTCCTCAACTGCCGATGCTCATCGTTCCCTCGAAAGATGGTCTTGAAAAGCAGCATTGCTTATACGACCCCAGAAAAAATAGAACCCGTCCTGTTGACTTCAAATTTTGCTTCAACAAAAGGTGTTGTGGCTCCTCTTTTGGTTGGTTGATCATGTGTGAAGAGACACTTGATCTTACTTTATTCAACCCTTTTTCTGGGACTGTGATTTGTCTTCCTTCCATTTTCATAGAGGATGAACCTGATTATGCCCCAGACCGCATAGTTAAAGCTATATTAACCAAAGATCCATGGTTATATCCAAACGATTATATGGTTGTAGCTATCTATAGTTCATATTCAAGGTTGTGCCTTATGAGAGCAAATGATAAGAGTTGGACGTATTCGTACCCAGAACCAAATATTCCTTTTAAGGATATTAATGTTTCTAGTGATACTTTATATGCTACGGAAAATAATATGATGGTTTGGAAAGTTGAAGTTAAGAATAGAGATGATGAAAGTTCATCGATTTCTATTTCTTTAAAGATGGTCCACGCTAAAAGAACCAATGATTTCGTTGTATCCTATATTACAGAGTCTTCAAAAGGAGAGCTTTTGTTAGTTTTGAGGTCAATATCTGAAGAGGATTCACAATTGGAGACTACCAAGTTTAAAGTCTACAAACTTATTGATGAGTGTGAAAATGACATGCTAAGGGCCGTAAAGTTGAAGAGTTTAGATGGAGATGCTATGTTTATCGGAGACTCTCAATCCATCTGTGTATCAACTAAGTATTTTCCTAAATGTTTACCAAATTGTATATATTTTATCAATGGTTACTACAATTATATTCCGAATTTAGAACAAGATTCAGGGATATTCAACCTAGAAGATAAAAGATTTGCGAACCATTACATACGAGATCCTGCACACAAGAATTTACCTCAACCCATTTGGATCATTCCAACAATATGTTCCAAAGATTTTGAAGATTAA

Coding sequence (CDS)

ATGGAAAATTCAAAATTTAGAGATTGGACTGCACTTGACTACGATGTTCTTGGTGTGATTCTCAACAAAATGGTGTCTCTCTATGATTATCTCCAATTCAGCATTGTATGTAAGTCTTGGTATTTTGTTGCATTACGACACAAACACCAACGATCCATAATTACCTCCAAGTTTCCTCAACTGCCGATGCTCATCGTTCCCTCGAAAGATGGTCTTGAAAAGCAGCATTGCTTATACGACCCCAGAAAAAATAGAACCCGTCCTGTTGACTTCAAATTTTGCTTCAACAAAAGGTGTTGTGGCTCCTCTTTTGGTTGGTTGATCATGTGTGAAGAGACACTTGATCTTACTTTATTCAACCCTTTTTCTGGGACTGTGATTTGTCTTCCTTCCATTTTCATAGAGGATGAACCTGATTATGCCCCAGACCGCATAGTTAAAGCTATATTAACCAAAGATCCATGGTTATATCCAAACGATTATATGGTTGTAGCTATCTATAGTTCATATTCAAGGTTGTGCCTTATGAGAGCAAATGATAAGAGTTGGACGTATTCGTACCCAGAACCAAATATTCCTTTTAAGGATATTAATGTTTCTAGTGATACTTTATATGCTACGGAAAATAATATGATGGTTTGGAAAGTTGAAGTTAAGAATAGAGATGATGAAAGTTCATCGATTTCTATTTCTTTAAAGATGGTCCACGCTAAAAGAACCAATGATTTCGTTGTATCCTATATTACAGAGTCTTCAAAAGGAGAGCTTTTGTTAGTTTTGAGGTCAATATCTGAAGAGGATTCACAATTGGAGACTACCAAGTTTAAAGTCTACAAACTTATTGATGAGTGTGAAAATGACATGCTAAGGGCCGTAAAGTTGAAGAGTTTAGATGGAGATGCTATGTTTATCGGAGACTCTCAATCCATCTGTGTATCAACTAAGTATTTTCCTAAATGTTTACCAAATTGTATATATTTTATCAATGGTTACTACAATTATATTCCGAATTTAGAACAAGATTCAGGGATATTCAACCTAGAAGATAAAAGATTTGCGAACCATTACATACGAGATCCTGCACACAAGAATTTACCTCAACCCATTTGGATCATTCCAACAATATGTTCCAAAGATTTTGAAGATTAA

Protein sequence

MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQLPMLIVPSKDGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPFSGTVICLPSIFIEDEPDYAPDRIVKAILTKDPWLYPNDYMVVAIYSSYSRLCLMRANDKSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRTNDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGDAMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDPAHKNLPQPIWIIPTICSKDFED
Homology
BLAST of Cp4.1LG14g08410 vs. NCBI nr
Match: XP_023552957.1 (probable F-box protein At1g65740 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 798 bits (2061), Expect = 5.72e-292
Identity = 382/382 (100.00%), Postives = 382/382 (100.00%), Query Frame = 0

Query: 1   MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQ 60
           MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQ
Sbjct: 1   MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQ 60

Query: 61  LPMLIVPSKDGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFN 120
           LPMLIVPSKDGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFN
Sbjct: 61  LPMLIVPSKDGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFN 120

Query: 121 PFSGTVICLPSIFIEDEPDYAPDRIVKAILTKDPWLYPNDYMVVAIYSSYSRLCLMRAND 180
           PFSGTVICLPSIFIEDEPDYAPDRIVKAILTKDPWLYPNDYMVVAIYSSYSRLCLMRAND
Sbjct: 121 PFSGTVICLPSIFIEDEPDYAPDRIVKAILTKDPWLYPNDYMVVAIYSSYSRLCLMRAND 180

Query: 181 KSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRT 240
           KSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRT
Sbjct: 181 KSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRT 240

Query: 241 NDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGD 300
           NDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGD
Sbjct: 241 NDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGD 300

Query: 301 AMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDP 360
           AMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDP
Sbjct: 301 AMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDP 360

Query: 361 AHKNLPQPIWIIPTICSKDFED 382
           AHKNLPQPIWIIPTICSKDFED
Sbjct: 361 AHKNLPQPIWIIPTICSKDFED 382

BLAST of Cp4.1LG14g08410 vs. NCBI nr
Match: KAG6577578.1 (putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 788 bits (2034), Expect = 7.47e-288
Identity = 378/382 (98.95%), Postives = 380/382 (99.48%), Query Frame = 0

Query: 1   MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQ 60
           MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQ
Sbjct: 1   MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQ 60

Query: 61  LPMLIVPSKDGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFN 120
           LPMLIVPSKDGLE QHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETL+LTLFN
Sbjct: 61  LPMLIVPSKDGLENQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLNLTLFN 120

Query: 121 PFSGTVICLPSIFIEDEPDYAPDRIVKAILTKDPWLYPNDYMVVAIYSSYSRLCLMRAND 180
           PFSGTVICLPSIFI+DEPDYAPDRIVKAILTKDP LYPNDYMVVAIYSSYSRLCLMRAND
Sbjct: 121 PFSGTVICLPSIFIDDEPDYAPDRIVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRAND 180

Query: 181 KSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRT 240
           KSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRT
Sbjct: 181 KSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRT 240

Query: 241 NDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGD 300
           NDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGD
Sbjct: 241 NDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGD 300

Query: 301 AMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDP 360
           AMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDP
Sbjct: 301 AMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDP 360

Query: 361 AHKNLPQPIWIIPTICSKDFED 382
           AHKNLPQPIWIIPTICSKDFED
Sbjct: 361 AHKNLPQPIWIIPTICSKDFED 382

BLAST of Cp4.1LG14g08410 vs. NCBI nr
Match: XP_022923266.1 (probable F-box protein At1g65740 [Cucurbita moschata])

HSP 1 Score: 788 bits (2034), Expect = 7.47e-288
Identity = 378/382 (98.95%), Postives = 381/382 (99.74%), Query Frame = 0

Query: 1   MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQ 60
           MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQ
Sbjct: 1   MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQ 60

Query: 61  LPMLIVPSKDGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFN 120
           LPMLIVPSK+GLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETL+LTLFN
Sbjct: 61  LPMLIVPSKNGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLNLTLFN 120

Query: 121 PFSGTVICLPSIFIEDEPDYAPDRIVKAILTKDPWLYPNDYMVVAIYSSYSRLCLMRAND 180
           PFSGTVICLPSIFI+DEPDYAPDRIVKAILTKDP LYPNDYMVVAIYSSYSRLCLMRAND
Sbjct: 121 PFSGTVICLPSIFIDDEPDYAPDRIVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRAND 180

Query: 181 KSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRT 240
           KSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRT
Sbjct: 181 KSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRT 240

Query: 241 NDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGD 300
           NDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGD
Sbjct: 241 NDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGD 300

Query: 301 AMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDP 360
           AMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDP
Sbjct: 301 AMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDP 360

Query: 361 AHKNLPQPIWIIPTICSKDFED 382
           AHKNLPQPIWIIPTICSKDFED
Sbjct: 361 AHKNLPQPIWIIPTICSKDFED 382

BLAST of Cp4.1LG14g08410 vs. NCBI nr
Match: XP_023553097.1 (uncharacterized protein LOC111810599 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 613 bits (1581), Expect = 3.39e-219
Identity = 295/359 (82.17%), Postives = 319/359 (88.86%), Query Frame = 0

Query: 24  MVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQLPMLIVPSKDGLEKQHCLYDPRK 83
           MVSLYDYLQFS+VCKSWYF+ALR+KHQRSIITSKFPQLPMLIVPSKDGLEKQHCLYDP K
Sbjct: 1   MVSLYDYLQFSLVCKSWYFLALRYKHQRSIITSKFPQLPMLIVPSKDGLEKQHCLYDPTK 60

Query: 84  NRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPFSGTVICLPSIFIEDEPDYAPD 143
           NRT PVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPFSGT ICLPSIFIEDEPDY PD
Sbjct: 61  NRTCPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPFSGTEICLPSIFIEDEPDYTPD 120

Query: 144 RIVKAILTKDPWLYPNDYMVVAIYSSYSRLCLMRANDKSWTYSYPEPNIPFKDINVSSDT 203
           RIVKAILTKDP LYPNDYMV+AIY S  +LCLMR+NDKSWTY YPEPNIPF D+NV  +T
Sbjct: 121 RIVKAILTKDPSLYPNDYMVIAIYGSCVKLCLMRSNDKSWTYYYPEPNIPFSDVNVYGNT 180

Query: 204 LYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRTNDFVVSYITESSKGELLLVLRSI 263
           +YA+  +MMVWKVEVK R+DESSSISIS++MVH K  +D   S IT SSKGELLLVLRSI
Sbjct: 181 IYASGVDMMVWKVEVKIRNDESSSISISVRMVHTKSIDDLTRSNITVSSKGELLLVLRSI 240

Query: 264 SEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGDAMFIGDSQSICVSTKYFPKCLPN 323
           S E +QLET KFKVYKL +E EN M +A+K+KSLDGDAMFIGDSQSICVSTK FPKCLPN
Sbjct: 241 SVEVTQLETNKFKVYKLTEERENGMRKAIKVKSLDGDAMFIGDSQSICVSTKDFPKCLPN 300

Query: 324 CIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDPAHKNLPQPIWIIPTICSKDFED 382
           CIYF+NG   Y+PNL QDSGIF LEDK F +HYIRDPAH+NLP PIWIIPTICSKDF D
Sbjct: 301 CIYFMNGCNYYVPNLVQDSGIFYLEDKDFGDHYIRDPAHENLPPPIWIIPTICSKDFSD 359

BLAST of Cp4.1LG14g08410 vs. NCBI nr
Match: XP_022923394.1 (uncharacterized protein LOC111431103 [Cucurbita moschata])

HSP 1 Score: 608 bits (1568), Expect = 3.24e-217
Identity = 293/359 (81.62%), Postives = 318/359 (88.58%), Query Frame = 0

Query: 24  MVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQLPMLIVPSKDGLEKQHCLYDPRK 83
           MVSLYDYLQFS+VCKSWYFVALRHKHQRSIITSKFPQLPMLIVPSKDGLEKQHCLYDPRK
Sbjct: 1   MVSLYDYLQFSLVCKSWYFVALRHKHQRSIITSKFPQLPMLIVPSKDGLEKQHCLYDPRK 60

Query: 84  NRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPFSGTVICLPSIFIEDEPDYAPD 143
           NRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPFSGTVI LPSIFIEDEPDY PD
Sbjct: 61  NRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPFSGTVIRLPSIFIEDEPDYTPD 120

Query: 144 RIVKAILTKDPWLYPNDYMVVAIYSSYSRLCLMRANDKSWTYSYPEPNIPFKDINVSSDT 203
           RIVKAILTKDP LYPNDYMVVAIY S ++LCLMR+NDKSWTY YPEPNIPF D+NV  DT
Sbjct: 121 RIVKAILTKDPSLYPNDYMVVAIYGSCAKLCLMRSNDKSWTYYYPEPNIPFSDVNVYGDT 180

Query: 204 LYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRTNDFVVSYITESSKGELLLVLRSI 263
           +YA+  +MM+WKVEVK R+DESS ISIS++ VH K  +D   S IT SSKGELLLVLRSI
Sbjct: 181 IYASGVDMMIWKVEVKIRNDESSLISISVRTVHTKSIDDLTRSNITVSSKGELLLVLRSI 240

Query: 264 SEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGDAMFIGDSQSICVSTKYFPKCLPN 323
           S E++QLET KFKVYKL +E EN M +A+K+KSLDGDAMFIGDSQSICVSTK F KCLPN
Sbjct: 241 SVEETQLETNKFKVYKLTEERENGMRKAIKVKSLDGDAMFIGDSQSICVSTKDFRKCLPN 300

Query: 324 CIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDPAHKNLPQPIWIIPTICSKDFED 382
           CIYF+NG    +PNL QDSGIF LEDK F +HYI+DP H+NLP PIWIIPTICSKD +D
Sbjct: 301 CIYFMNGCNYCVPNLVQDSGIFYLEDKDFGDHYIQDPTHENLPPPIWIIPTICSKDLKD 359

BLAST of Cp4.1LG14g08410 vs. ExPASy TrEMBL
Match: A0A6J1E6C7 (probable F-box protein At1g65740 OS=Cucurbita moschata OX=3662 GN=LOC111431011 PE=4 SV=1)

HSP 1 Score: 788 bits (2034), Expect = 3.62e-288
Identity = 378/382 (98.95%), Postives = 381/382 (99.74%), Query Frame = 0

Query: 1   MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQ 60
           MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQ
Sbjct: 1   MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQ 60

Query: 61  LPMLIVPSKDGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFN 120
           LPMLIVPSK+GLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETL+LTLFN
Sbjct: 61  LPMLIVPSKNGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLNLTLFN 120

Query: 121 PFSGTVICLPSIFIEDEPDYAPDRIVKAILTKDPWLYPNDYMVVAIYSSYSRLCLMRAND 180
           PFSGTVICLPSIFI+DEPDYAPDRIVKAILTKDP LYPNDYMVVAIYSSYSRLCLMRAND
Sbjct: 121 PFSGTVICLPSIFIDDEPDYAPDRIVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRAND 180

Query: 181 KSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRT 240
           KSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRT
Sbjct: 181 KSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRT 240

Query: 241 NDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGD 300
           NDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGD
Sbjct: 241 NDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGD 300

Query: 301 AMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDP 360
           AMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDP
Sbjct: 301 AMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDP 360

Query: 361 AHKNLPQPIWIIPTICSKDFED 382
           AHKNLPQPIWIIPTICSKDFED
Sbjct: 361 AHKNLPQPIWIIPTICSKDFED 382

BLAST of Cp4.1LG14g08410 vs. ExPASy TrEMBL
Match: A0A6J1E6A0 (uncharacterized protein LOC111431103 OS=Cucurbita moschata OX=3662 GN=LOC111431103 PE=4 SV=1)

HSP 1 Score: 608 bits (1568), Expect = 1.57e-217
Identity = 293/359 (81.62%), Postives = 318/359 (88.58%), Query Frame = 0

Query: 24  MVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQLPMLIVPSKDGLEKQHCLYDPRK 83
           MVSLYDYLQFS+VCKSWYFVALRHKHQRSIITSKFPQLPMLIVPSKDGLEKQHCLYDPRK
Sbjct: 1   MVSLYDYLQFSLVCKSWYFVALRHKHQRSIITSKFPQLPMLIVPSKDGLEKQHCLYDPRK 60

Query: 84  NRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPFSGTVICLPSIFIEDEPDYAPD 143
           NRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPFSGTVI LPSIFIEDEPDY PD
Sbjct: 61  NRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPFSGTVIRLPSIFIEDEPDYTPD 120

Query: 144 RIVKAILTKDPWLYPNDYMVVAIYSSYSRLCLMRANDKSWTYSYPEPNIPFKDINVSSDT 203
           RIVKAILTKDP LYPNDYMVVAIY S ++LCLMR+NDKSWTY YPEPNIPF D+NV  DT
Sbjct: 121 RIVKAILTKDPSLYPNDYMVVAIYGSCAKLCLMRSNDKSWTYYYPEPNIPFSDVNVYGDT 180

Query: 204 LYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRTNDFVVSYITESSKGELLLVLRSI 263
           +YA+  +MM+WKVEVK R+DESS ISIS++ VH K  +D   S IT SSKGELLLVLRSI
Sbjct: 181 IYASGVDMMIWKVEVKIRNDESSLISISVRTVHTKSIDDLTRSNITVSSKGELLLVLRSI 240

Query: 264 SEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGDAMFIGDSQSICVSTKYFPKCLPN 323
           S E++QLET KFKVYKL +E EN M +A+K+KSLDGDAMFIGDSQSICVSTK F KCLPN
Sbjct: 241 SVEETQLETNKFKVYKLTEERENGMRKAIKVKSLDGDAMFIGDSQSICVSTKDFRKCLPN 300

Query: 324 CIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDPAHKNLPQPIWIIPTICSKDFED 382
           CIYF+NG    +PNL QDSGIF LEDK F +HYI+DP H+NLP PIWIIPTICSKD +D
Sbjct: 301 CIYFMNGCNYCVPNLVQDSGIFYLEDKDFGDHYIQDPTHENLPPPIWIIPTICSKDLKD 359

BLAST of Cp4.1LG14g08410 vs. ExPASy TrEMBL
Match: A0A6J1E5P5 (probable F-box protein At1g65740 OS=Cucurbita moschata OX=3662 GN=LOC111431012 PE=4 SV=1)

HSP 1 Score: 560 bits (1442), Expect = 6.39e-198
Identity = 273/386 (70.73%), Postives = 309/386 (80.05%), Query Frame = 0

Query: 1   MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQ 60
           MENSK RDWTALDYDVLGVILNKMVSLYDYLQFS+VCKSWYF+AL HKHQRSII SK PQ
Sbjct: 1   MENSKSRDWTALDYDVLGVILNKMVSLYDYLQFSLVCKSWYFLALHHKHQRSIIASKVPQ 60

Query: 61  LPMLIVPSKDGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFN 120
           LPMLIVPSKDGLEKQHCLYD   N  R VDFKFCFNKRCCGSSFGWLIM +ETL + LFN
Sbjct: 61  LPMLIVPSKDGLEKQHCLYDLTTNIVRSVDFKFCFNKRCCGSSFGWLIMRDETLGIVLFN 120

Query: 121 PFSGTVICLPSIFIEDEPDYAPDRIVKAILTKDPWLYPNDYMVVAIYSSYSRLCLMRAND 180
           PFSG VI LP +   D+ ++ P  I+KAILTKDP LYPNDYMVV I+ +Y RLCL+RAND
Sbjct: 121 PFSGAVIYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVVGIFGTYKRLCLIRAND 180

Query: 181 KSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRT 240
           K+WTY YP PNIPF DIN+  DT+YATEN++ VWKVEV+N +DESSSISIS+KMVH KR 
Sbjct: 181 KTWTYYYPTPNIPFNDINICRDTIYATENDLDVWKVEVQNSEDESSSISISVKMVHTKRI 240

Query: 241 NDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGD 300
                +YITESSKGELL+VLR  +  + Q ET  F+VYKLI E E+++ RAV++KSLDGD
Sbjct: 241 RYIGTAYITESSKGELLVVLRIFNSGEEQFETVDFEVYKLIHENEDELRRAVEVKSLDGD 300

Query: 301 AMFIGDSQSICVSTKYFPKCLPNCIYFI-NGYYNYIPNL---EQDSGIFNLEDKRFANHY 360
           A+FIGDSQSICVSTK F  CLPN IYF  N Y N +       QD G+FN ED  F +HY
Sbjct: 301 AIFIGDSQSICVSTKEFAGCLPNRIYFTDNRYVNLVVGKLDGTQDLGVFNFEDGSFEDHY 360

Query: 361 IRDPAHKNLPQPIWIIPTICSKDFED 382
           I DPA KNLP P+WIIPTICSKD +D
Sbjct: 361 IADPAQKNLPSPMWIIPTICSKDLDD 386

BLAST of Cp4.1LG14g08410 vs. ExPASy TrEMBL
Match: A0A6J1E923 (probable F-box protein At4g22165 OS=Cucurbita moschata OX=3662 GN=LOC111431007 PE=4 SV=1)

HSP 1 Score: 556 bits (1432), Expect = 4.22e-196
Identity = 273/385 (70.91%), Postives = 307/385 (79.74%), Query Frame = 0

Query: 1   MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQ 60
           MENS  RDWTALDYDVLGVILNKMVSLYDYLQF++VCKSWYF+ALRHKH+RSIITSK  Q
Sbjct: 1   MENSNSRDWTALDYDVLGVILNKMVSLYDYLQFNLVCKSWYFLALRHKHERSIITSKVTQ 60

Query: 61  LPMLIVPSKDGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFN 120
           LPMLIVPSKDGLEKQHCLYD  +N  RPVDFKFCFNKRCCGSSFGWLIM +ETL + LFN
Sbjct: 61  LPMLIVPSKDGLEKQHCLYDLTRNVVRPVDFKFCFNKRCCGSSFGWLIMRDETLGIVLFN 120

Query: 121 PFSGTVICLPSIFIEDEPDYAPDRIVKAILTKDPWLYPNDYMVVAIYSSYSRLCLMRAND 180
           PFSGTVI LP +   D+ ++ P  I+KAILTKDP LYPNDYMVVAI+ +Y RLCL+RAND
Sbjct: 121 PFSGTVIYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVVAIFGTYKRLCLIRAND 180

Query: 181 KSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRT 240
           K+WTY YP PNIPF DIN+  DTLYATE  + VWKVEV+N +DESSSI IS+KMVH    
Sbjct: 181 KTWTYYYPTPNIPFNDINICGDTLYATEYYLNVWKVEVENSEDESSSICISVKMVHTIEM 240

Query: 241 NDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGD 300
              V SYITESSKGELL+VLR +   + Q ET  F+VYKLI E E++M RAV++KSLDGD
Sbjct: 241 GHLVTSYITESSKGELLVVLRILDSGEEQFETVDFEVYKLIHENEDEMRRAVEVKSLDGD 300

Query: 301 AMFIGDSQSICVSTKYFPKCLPNCIYFI-NGYYNYIPNL---EQDSGIFNLEDKRFANHY 360
           A+FIGDSQSICVSTK FP CLPN IYF  N Y N +       QD G FN E+  F + Y
Sbjct: 301 AIFIGDSQSICVSTKEFPGCLPNRIYFTDNRYVNLVVGKLDGTQDLGTFNFENGSFEDQY 360

Query: 361 IRDPAHKNLPQPIWIIPTICSKDFE 381
           I DPA KNLP PIWIIPTICSKD +
Sbjct: 361 IADPAQKNLPSPIWIIPTICSKDLD 385

BLAST of Cp4.1LG14g08410 vs. ExPASy TrEMBL
Match: A0A6J1E5W8 (uncharacterized protein LOC111431008 OS=Cucurbita moschata OX=3662 GN=LOC111431008 PE=4 SV=1)

HSP 1 Score: 469 bits (1208), Expect = 2.15e-163
Identity = 229/318 (72.01%), Postives = 257/318 (80.82%), Query Frame = 0

Query: 1   MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQ 60
           MENSK RDWT LDYDVLGVILNKMVSLYDY QFS+VCKSWYF ALRHKHQRSII SK PQ
Sbjct: 1   MENSKSRDWTTLDYDVLGVILNKMVSLYDYFQFSLVCKSWYFHALRHKHQRSIIASKVPQ 60

Query: 61  LPMLIVPSKDGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFN 120
           L MLIVP +DG EKQHCLYD  +N  R VDFKFCFNKRC GSSFGWLIM +ETL + LFN
Sbjct: 61  LAMLIVPLEDGFEKQHCLYDLTRNIVRSVDFKFCFNKRCRGSSFGWLIMRDETLGIVLFN 120

Query: 121 PFSGTVICLPSIFIEDEPDYAPDRIVKAILTKDPWLYPNDYMVVAIYSSYSRLCLMRAND 180
           PFSGTVI LP +   D+ ++ P  I+KAILTKDP LYPNDYMVV I+ +Y RLCL+RAND
Sbjct: 121 PFSGTVIYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVVGIFGTYKRLCLIRAND 180

Query: 181 KSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRT 240
           K+WTY YP PNIPF DIN+  DTLYATE  + VWKVEV+N +DESSSI IS+KMVH    
Sbjct: 181 KTWTYYYPTPNIPFNDINICGDTLYATEYYLNVWKVEVENSEDESSSICISVKMVHTIEM 240

Query: 241 NDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGD 300
              V SYITESSKGELL+VLR +   + Q ET  F+VYKLI E E++M RAV++KSLDGD
Sbjct: 241 GHMVTSYITESSKGELLVVLRILDSGEEQFETVDFEVYKLIHENEDEMRRAVEIKSLDGD 300

Query: 301 AMFIGDSQSICVSTKYFP 318
           A+FIGDSQSICVSTK FP
Sbjct: 301 AIFIGDSQSICVSTKEFP 318

BLAST of Cp4.1LG14g08410 vs. TAIR 10
Match: AT1G68960.1 (Protein of unknown function (DUF295) )

HSP 1 Score: 51.2 bits (121), Expect = 2.1e-06
Identity = 90/355 (25.35%), Postives = 141/355 (39.72%), Query Frame = 0

Query: 70  DGLEKQHCLYDPRKNRTRPVDFKF----CFNKRCCGSSFGWLIMC---EETLDLT-LFNP 129
           DG      LYDPRK     ++ K      +     GSS GWL +    + T+ LT + NP
Sbjct: 51  DGKVVNFNLYDPRKQEQVKIENKILSKEVYESHKLGSSRGWLALLNKKDSTVRLTNILNP 110

Query: 130 FSGTVICLPSIFIEDEPDYAPDRIVKAILTKDPWLYPNDYMVVAIYSSYSRLCLMRANDK 189
            S  +I LPS+   D+ +   +  V +   +D         VVA+    SR+ L R  D 
Sbjct: 111 -SKKIISLPSL-TRDKYESHVNVSVSSSNEED--------CVVAVKFYGSRVSLCRPGDS 170

Query: 190 SW-------------TYSYPEPNIPFKDINVSSDTLYATE-------------------N 249
            W             T  Y E +  F   N + D    T+                   +
Sbjct: 171 EWTRIDVPCPSFHSSTVIYSERDRRFYLNNCNPDYTGPTDFTPKSGLHTPVSGYKRFLFS 230

Query: 250 NMMVWKVEVKNRDDESSSISISLKMVHAKRTNDFVVSYITES--SKGELLL--VLRSISE 309
           N +    E++N +   S   I  ++V +     F+V++  ES   KGE+      R  + 
Sbjct: 231 NFLEEMPELEN-ERRLSRFRIQQQLVESASGQSFIVAWFVESLTDKGEVATWGDTRYNNN 290

Query: 310 EDSQLETTKFKVYKLIDECENDMLRAVKLKSLD-GD-AMFIGDSQSICVSTKYFPKCLPN 369
           +D   +T K  V +  +E      + +   + D GD  +F+G+++S C+S K FP   PN
Sbjct: 291 KDLCKKTHKIMVIRQDEE------QGIGPYTDDIGDLCIFLGENESFCLSAKDFPGLNPN 350

Query: 370 CIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDPAHKNLPQP---IWIIPTI 376
            +YF      Y        GI++L        Y+ D    + P P    W+ PTI
Sbjct: 351 SVYFAGHGSGY--------GIWDLASCTI--RYLSD----STPPPGRMFWLPPTI 374

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_023552957.15.72e-292100.00probable F-box protein At1g65740 [Cucurbita pepo subsp. pepo][more]
KAG6577578.17.47e-28898.95putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022923266.17.47e-28898.95probable F-box protein At1g65740 [Cucurbita moschata][more]
XP_023553097.13.39e-21982.17uncharacterized protein LOC111810599 [Cucurbita pepo subsp. pepo][more]
XP_022923394.13.24e-21781.62uncharacterized protein LOC111431103 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
A0A6J1E6C73.62e-28898.95probable F-box protein At1g65740 OS=Cucurbita moschata OX=3662 GN=LOC111431011 P... [more]
A0A6J1E6A01.57e-21781.62uncharacterized protein LOC111431103 OS=Cucurbita moschata OX=3662 GN=LOC1114311... [more]
A0A6J1E5P56.39e-19870.73probable F-box protein At1g65740 OS=Cucurbita moschata OX=3662 GN=LOC111431012 P... [more]
A0A6J1E9234.22e-19670.91probable F-box protein At4g22165 OS=Cucurbita moschata OX=3662 GN=LOC111431007 P... [more]
A0A6J1E5W82.15e-16372.01uncharacterized protein LOC111431008 OS=Cucurbita moschata OX=3662 GN=LOC1114310... [more]
Match NameE-valueIdentityDescription
AT1G68960.12.1e-0625.35Protein of unknown function (DUF295) [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005174Domain unknown function DUF295PFAMPF03478DUF295coord: 292..347
e-value: 4.0E-12
score: 45.6
NoneNo IPR availablePANTHERPTHR44259:SF18UBIQUITIN-PROTEIN LIGASEcoord: 6..373
NoneNo IPR availablePANTHERPTHR44259OS07G0183000 PROTEIN-RELATEDcoord: 6..373
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 5..68

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG14g08410.1Cp4.1LG14g08410.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding