Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAATTCAAAATTTAGAGATTGGACTGCACTTGACTACGATGTTCTTGGTGTGATTCTCAACAAAATGGTGTCTCTCTATGATTATCTCCAATTCAGCATTGTATGTAAGTCTTGGTATTTTGTTGCATTACGACACAAACACCAACGATCCATAATTACCTCCAAGTTTCCTCAACTGCCGATGCTCATCGTTCCCTCGAAAGATGGTCTTGAAAAGCAGCATTGCTTATACGACCCCAGAAAAAATAGAACCCGTCCTGTTGACTTCAAATTTTGCTTCAACAAAAGGTGTTGTGGCTCCTCTTTTGGTTGGTTGATCATGTGTGAAGAGACACTTGATCTTACTTTATTCAACCCTTTTTCTGGGACTGTGATTTGTCTTCCTTCCATTTTCATAGAGGATGAACCTGATTATGCCCCAGACCGCATAGTTAAAGCTATATTAACCAAAGATCCATGGTTATATCCAAACGATTATATGGTTGTAGCTATCTATAGTTCATATTCAAGGTTGTGCCTTATGAGAGCAAATGATAAGAGTTGGACGTATTCGTACCCAGAACCAAATATTCCTTTTAAGGATATTAATGTTTCTAGTGATACTTTATATGCTACGGAAAATAATATGATGGTTTGGAAAGTTGAAGTTAAGAATAGAGATGATGAAAGTTCATCGATTTCTATTTCTTTAAAGATGGTCCACGCTAAAAGAACCAATGATTTCGTTGTATCCTATATTACAGAGTCTTCAAAAGGAGAGCTTTTGTTAGTTTTGAGGTCAATATCTGAAGAGGATTCACAATTGGAGACTACCAAGTTTAAAGTCTACAAACTTATTGATGAGTGTGAAAATGACATGCTAAGGGCCGTAAAGTTGAAGAGTTTAGATGGAGATGCTATGTTTATCGGAGACTCTCAATCCATCTGTGTATCAACTAAGTATTTTCCTAAATGTTTACCAAATTGTATATATTTTATCAATGGTTACTACAATTATATTCCGAATTTAGAACAAGATTCAGGGATATTCAACCTAGAAGATAAAAGATTTGCGAACCATTACATACGAGATCCTGCACACAAGAATTTACCTCAACCCATTTGGATCATTCCAACAATATGTTCCAAAGATTTTGAAGATTAA
mRNA sequence
ATGGAAAATTCAAAATTTAGAGATTGGACTGCACTTGACTACGATGTTCTTGGTGTGATTCTCAACAAAATGGTGTCTCTCTATGATTATCTCCAATTCAGCATTGTATGTAAGTCTTGGTATTTTGTTGCATTACGACACAAACACCAACGATCCATAATTACCTCCAAGTTTCCTCAACTGCCGATGCTCATCGTTCCCTCGAAAGATGGTCTTGAAAAGCAGCATTGCTTATACGACCCCAGAAAAAATAGAACCCGTCCTGTTGACTTCAAATTTTGCTTCAACAAAAGGTGTTGTGGCTCCTCTTTTGGTTGGTTGATCATGTGTGAAGAGACACTTGATCTTACTTTATTCAACCCTTTTTCTGGGACTGTGATTTGTCTTCCTTCCATTTTCATAGAGGATGAACCTGATTATGCCCCAGACCGCATAGTTAAAGCTATATTAACCAAAGATCCATGGTTATATCCAAACGATTATATGGTTGTAGCTATCTATAGTTCATATTCAAGGTTGTGCCTTATGAGAGCAAATGATAAGAGTTGGACGTATTCGTACCCAGAACCAAATATTCCTTTTAAGGATATTAATGTTTCTAGTGATACTTTATATGCTACGGAAAATAATATGATGGTTTGGAAAGTTGAAGTTAAGAATAGAGATGATGAAAGTTCATCGATTTCTATTTCTTTAAAGATGGTCCACGCTAAAAGAACCAATGATTTCGTTGTATCCTATATTACAGAGTCTTCAAAAGGAGAGCTTTTGTTAGTTTTGAGGTCAATATCTGAAGAGGATTCACAATTGGAGACTACCAAGTTTAAAGTCTACAAACTTATTGATGAGTGTGAAAATGACATGCTAAGGGCCGTAAAGTTGAAGAGTTTAGATGGAGATGCTATGTTTATCGGAGACTCTCAATCCATCTGTGTATCAACTAAGTATTTTCCTAAATGTTTACCAAATTGTATATATTTTATCAATGGTTACTACAATTATATTCCGAATTTAGAACAAGATTCAGGGATATTCAACCTAGAAGATAAAAGATTTGCGAACCATTACATACGAGATCCTGCACACAAGAATTTACCTCAACCCATTTGGATCATTCCAACAATATGTTCCAAAGATTTTGAAGATTAA
Coding sequence (CDS)
ATGGAAAATTCAAAATTTAGAGATTGGACTGCACTTGACTACGATGTTCTTGGTGTGATTCTCAACAAAATGGTGTCTCTCTATGATTATCTCCAATTCAGCATTGTATGTAAGTCTTGGTATTTTGTTGCATTACGACACAAACACCAACGATCCATAATTACCTCCAAGTTTCCTCAACTGCCGATGCTCATCGTTCCCTCGAAAGATGGTCTTGAAAAGCAGCATTGCTTATACGACCCCAGAAAAAATAGAACCCGTCCTGTTGACTTCAAATTTTGCTTCAACAAAAGGTGTTGTGGCTCCTCTTTTGGTTGGTTGATCATGTGTGAAGAGACACTTGATCTTACTTTATTCAACCCTTTTTCTGGGACTGTGATTTGTCTTCCTTCCATTTTCATAGAGGATGAACCTGATTATGCCCCAGACCGCATAGTTAAAGCTATATTAACCAAAGATCCATGGTTATATCCAAACGATTATATGGTTGTAGCTATCTATAGTTCATATTCAAGGTTGTGCCTTATGAGAGCAAATGATAAGAGTTGGACGTATTCGTACCCAGAACCAAATATTCCTTTTAAGGATATTAATGTTTCTAGTGATACTTTATATGCTACGGAAAATAATATGATGGTTTGGAAAGTTGAAGTTAAGAATAGAGATGATGAAAGTTCATCGATTTCTATTTCTTTAAAGATGGTCCACGCTAAAAGAACCAATGATTTCGTTGTATCCTATATTACAGAGTCTTCAAAAGGAGAGCTTTTGTTAGTTTTGAGGTCAATATCTGAAGAGGATTCACAATTGGAGACTACCAAGTTTAAAGTCTACAAACTTATTGATGAGTGTGAAAATGACATGCTAAGGGCCGTAAAGTTGAAGAGTTTAGATGGAGATGCTATGTTTATCGGAGACTCTCAATCCATCTGTGTATCAACTAAGTATTTTCCTAAATGTTTACCAAATTGTATATATTTTATCAATGGTTACTACAATTATATTCCGAATTTAGAACAAGATTCAGGGATATTCAACCTAGAAGATAAAAGATTTGCGAACCATTACATACGAGATCCTGCACACAAGAATTTACCTCAACCCATTTGGATCATTCCAACAATATGTTCCAAAGATTTTGAAGATTAA
Protein sequence
MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQLPMLIVPSKDGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPFSGTVICLPSIFIEDEPDYAPDRIVKAILTKDPWLYPNDYMVVAIYSSYSRLCLMRANDKSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRTNDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGDAMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDPAHKNLPQPIWIIPTICSKDFED
Homology
BLAST of Cp4.1LG14g08410 vs. NCBI nr
Match:
XP_023552957.1 (probable F-box protein At1g65740 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 798 bits (2061), Expect = 5.72e-292
Identity = 382/382 (100.00%), Postives = 382/382 (100.00%), Query Frame = 0
Query: 1 MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQ 60
MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQ
Sbjct: 1 MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQ 60
Query: 61 LPMLIVPSKDGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFN 120
LPMLIVPSKDGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFN
Sbjct: 61 LPMLIVPSKDGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFN 120
Query: 121 PFSGTVICLPSIFIEDEPDYAPDRIVKAILTKDPWLYPNDYMVVAIYSSYSRLCLMRAND 180
PFSGTVICLPSIFIEDEPDYAPDRIVKAILTKDPWLYPNDYMVVAIYSSYSRLCLMRAND
Sbjct: 121 PFSGTVICLPSIFIEDEPDYAPDRIVKAILTKDPWLYPNDYMVVAIYSSYSRLCLMRAND 180
Query: 181 KSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRT 240
KSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRT
Sbjct: 181 KSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRT 240
Query: 241 NDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGD 300
NDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGD
Sbjct: 241 NDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGD 300
Query: 301 AMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDP 360
AMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDP
Sbjct: 301 AMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDP 360
Query: 361 AHKNLPQPIWIIPTICSKDFED 382
AHKNLPQPIWIIPTICSKDFED
Sbjct: 361 AHKNLPQPIWIIPTICSKDFED 382
BLAST of Cp4.1LG14g08410 vs. NCBI nr
Match:
KAG6577578.1 (putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 788 bits (2034), Expect = 7.47e-288
Identity = 378/382 (98.95%), Postives = 380/382 (99.48%), Query Frame = 0
Query: 1 MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQ 60
MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQ
Sbjct: 1 MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQ 60
Query: 61 LPMLIVPSKDGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFN 120
LPMLIVPSKDGLE QHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETL+LTLFN
Sbjct: 61 LPMLIVPSKDGLENQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLNLTLFN 120
Query: 121 PFSGTVICLPSIFIEDEPDYAPDRIVKAILTKDPWLYPNDYMVVAIYSSYSRLCLMRAND 180
PFSGTVICLPSIFI+DEPDYAPDRIVKAILTKDP LYPNDYMVVAIYSSYSRLCLMRAND
Sbjct: 121 PFSGTVICLPSIFIDDEPDYAPDRIVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRAND 180
Query: 181 KSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRT 240
KSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRT
Sbjct: 181 KSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRT 240
Query: 241 NDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGD 300
NDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGD
Sbjct: 241 NDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGD 300
Query: 301 AMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDP 360
AMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDP
Sbjct: 301 AMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDP 360
Query: 361 AHKNLPQPIWIIPTICSKDFED 382
AHKNLPQPIWIIPTICSKDFED
Sbjct: 361 AHKNLPQPIWIIPTICSKDFED 382
BLAST of Cp4.1LG14g08410 vs. NCBI nr
Match:
XP_022923266.1 (probable F-box protein At1g65740 [Cucurbita moschata])
HSP 1 Score: 788 bits (2034), Expect = 7.47e-288
Identity = 378/382 (98.95%), Postives = 381/382 (99.74%), Query Frame = 0
Query: 1 MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQ 60
MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQ
Sbjct: 1 MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQ 60
Query: 61 LPMLIVPSKDGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFN 120
LPMLIVPSK+GLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETL+LTLFN
Sbjct: 61 LPMLIVPSKNGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLNLTLFN 120
Query: 121 PFSGTVICLPSIFIEDEPDYAPDRIVKAILTKDPWLYPNDYMVVAIYSSYSRLCLMRAND 180
PFSGTVICLPSIFI+DEPDYAPDRIVKAILTKDP LYPNDYMVVAIYSSYSRLCLMRAND
Sbjct: 121 PFSGTVICLPSIFIDDEPDYAPDRIVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRAND 180
Query: 181 KSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRT 240
KSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRT
Sbjct: 181 KSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRT 240
Query: 241 NDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGD 300
NDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGD
Sbjct: 241 NDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGD 300
Query: 301 AMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDP 360
AMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDP
Sbjct: 301 AMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDP 360
Query: 361 AHKNLPQPIWIIPTICSKDFED 382
AHKNLPQPIWIIPTICSKDFED
Sbjct: 361 AHKNLPQPIWIIPTICSKDFED 382
BLAST of Cp4.1LG14g08410 vs. NCBI nr
Match:
XP_023553097.1 (uncharacterized protein LOC111810599 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 613 bits (1581), Expect = 3.39e-219
Identity = 295/359 (82.17%), Postives = 319/359 (88.86%), Query Frame = 0
Query: 24 MVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQLPMLIVPSKDGLEKQHCLYDPRK 83
MVSLYDYLQFS+VCKSWYF+ALR+KHQRSIITSKFPQLPMLIVPSKDGLEKQHCLYDP K
Sbjct: 1 MVSLYDYLQFSLVCKSWYFLALRYKHQRSIITSKFPQLPMLIVPSKDGLEKQHCLYDPTK 60
Query: 84 NRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPFSGTVICLPSIFIEDEPDYAPD 143
NRT PVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPFSGT ICLPSIFIEDEPDY PD
Sbjct: 61 NRTCPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPFSGTEICLPSIFIEDEPDYTPD 120
Query: 144 RIVKAILTKDPWLYPNDYMVVAIYSSYSRLCLMRANDKSWTYSYPEPNIPFKDINVSSDT 203
RIVKAILTKDP LYPNDYMV+AIY S +LCLMR+NDKSWTY YPEPNIPF D+NV +T
Sbjct: 121 RIVKAILTKDPSLYPNDYMVIAIYGSCVKLCLMRSNDKSWTYYYPEPNIPFSDVNVYGNT 180
Query: 204 LYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRTNDFVVSYITESSKGELLLVLRSI 263
+YA+ +MMVWKVEVK R+DESSSISIS++MVH K +D S IT SSKGELLLVLRSI
Sbjct: 181 IYASGVDMMVWKVEVKIRNDESSSISISVRMVHTKSIDDLTRSNITVSSKGELLLVLRSI 240
Query: 264 SEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGDAMFIGDSQSICVSTKYFPKCLPN 323
S E +QLET KFKVYKL +E EN M +A+K+KSLDGDAMFIGDSQSICVSTK FPKCLPN
Sbjct: 241 SVEVTQLETNKFKVYKLTEERENGMRKAIKVKSLDGDAMFIGDSQSICVSTKDFPKCLPN 300
Query: 324 CIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDPAHKNLPQPIWIIPTICSKDFED 382
CIYF+NG Y+PNL QDSGIF LEDK F +HYIRDPAH+NLP PIWIIPTICSKDF D
Sbjct: 301 CIYFMNGCNYYVPNLVQDSGIFYLEDKDFGDHYIRDPAHENLPPPIWIIPTICSKDFSD 359
BLAST of Cp4.1LG14g08410 vs. NCBI nr
Match:
XP_022923394.1 (uncharacterized protein LOC111431103 [Cucurbita moschata])
HSP 1 Score: 608 bits (1568), Expect = 3.24e-217
Identity = 293/359 (81.62%), Postives = 318/359 (88.58%), Query Frame = 0
Query: 24 MVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQLPMLIVPSKDGLEKQHCLYDPRK 83
MVSLYDYLQFS+VCKSWYFVALRHKHQRSIITSKFPQLPMLIVPSKDGLEKQHCLYDPRK
Sbjct: 1 MVSLYDYLQFSLVCKSWYFVALRHKHQRSIITSKFPQLPMLIVPSKDGLEKQHCLYDPRK 60
Query: 84 NRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPFSGTVICLPSIFIEDEPDYAPD 143
NRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPFSGTVI LPSIFIEDEPDY PD
Sbjct: 61 NRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPFSGTVIRLPSIFIEDEPDYTPD 120
Query: 144 RIVKAILTKDPWLYPNDYMVVAIYSSYSRLCLMRANDKSWTYSYPEPNIPFKDINVSSDT 203
RIVKAILTKDP LYPNDYMVVAIY S ++LCLMR+NDKSWTY YPEPNIPF D+NV DT
Sbjct: 121 RIVKAILTKDPSLYPNDYMVVAIYGSCAKLCLMRSNDKSWTYYYPEPNIPFSDVNVYGDT 180
Query: 204 LYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRTNDFVVSYITESSKGELLLVLRSI 263
+YA+ +MM+WKVEVK R+DESS ISIS++ VH K +D S IT SSKGELLLVLRSI
Sbjct: 181 IYASGVDMMIWKVEVKIRNDESSLISISVRTVHTKSIDDLTRSNITVSSKGELLLVLRSI 240
Query: 264 SEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGDAMFIGDSQSICVSTKYFPKCLPN 323
S E++QLET KFKVYKL +E EN M +A+K+KSLDGDAMFIGDSQSICVSTK F KCLPN
Sbjct: 241 SVEETQLETNKFKVYKLTEERENGMRKAIKVKSLDGDAMFIGDSQSICVSTKDFRKCLPN 300
Query: 324 CIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDPAHKNLPQPIWIIPTICSKDFED 382
CIYF+NG +PNL QDSGIF LEDK F +HYI+DP H+NLP PIWIIPTICSKD +D
Sbjct: 301 CIYFMNGCNYCVPNLVQDSGIFYLEDKDFGDHYIQDPTHENLPPPIWIIPTICSKDLKD 359
BLAST of Cp4.1LG14g08410 vs. ExPASy TrEMBL
Match:
A0A6J1E6C7 (probable F-box protein At1g65740 OS=Cucurbita moschata OX=3662 GN=LOC111431011 PE=4 SV=1)
HSP 1 Score: 788 bits (2034), Expect = 3.62e-288
Identity = 378/382 (98.95%), Postives = 381/382 (99.74%), Query Frame = 0
Query: 1 MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQ 60
MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQ
Sbjct: 1 MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQ 60
Query: 61 LPMLIVPSKDGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFN 120
LPMLIVPSK+GLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETL+LTLFN
Sbjct: 61 LPMLIVPSKNGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLNLTLFN 120
Query: 121 PFSGTVICLPSIFIEDEPDYAPDRIVKAILTKDPWLYPNDYMVVAIYSSYSRLCLMRAND 180
PFSGTVICLPSIFI+DEPDYAPDRIVKAILTKDP LYPNDYMVVAIYSSYSRLCLMRAND
Sbjct: 121 PFSGTVICLPSIFIDDEPDYAPDRIVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRAND 180
Query: 181 KSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRT 240
KSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRT
Sbjct: 181 KSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRT 240
Query: 241 NDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGD 300
NDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGD
Sbjct: 241 NDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGD 300
Query: 301 AMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDP 360
AMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDP
Sbjct: 301 AMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDP 360
Query: 361 AHKNLPQPIWIIPTICSKDFED 382
AHKNLPQPIWIIPTICSKDFED
Sbjct: 361 AHKNLPQPIWIIPTICSKDFED 382
BLAST of Cp4.1LG14g08410 vs. ExPASy TrEMBL
Match:
A0A6J1E6A0 (uncharacterized protein LOC111431103 OS=Cucurbita moschata OX=3662 GN=LOC111431103 PE=4 SV=1)
HSP 1 Score: 608 bits (1568), Expect = 1.57e-217
Identity = 293/359 (81.62%), Postives = 318/359 (88.58%), Query Frame = 0
Query: 24 MVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQLPMLIVPSKDGLEKQHCLYDPRK 83
MVSLYDYLQFS+VCKSWYFVALRHKHQRSIITSKFPQLPMLIVPSKDGLEKQHCLYDPRK
Sbjct: 1 MVSLYDYLQFSLVCKSWYFVALRHKHQRSIITSKFPQLPMLIVPSKDGLEKQHCLYDPRK 60
Query: 84 NRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPFSGTVICLPSIFIEDEPDYAPD 143
NRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPFSGTVI LPSIFIEDEPDY PD
Sbjct: 61 NRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPFSGTVIRLPSIFIEDEPDYTPD 120
Query: 144 RIVKAILTKDPWLYPNDYMVVAIYSSYSRLCLMRANDKSWTYSYPEPNIPFKDINVSSDT 203
RIVKAILTKDP LYPNDYMVVAIY S ++LCLMR+NDKSWTY YPEPNIPF D+NV DT
Sbjct: 121 RIVKAILTKDPSLYPNDYMVVAIYGSCAKLCLMRSNDKSWTYYYPEPNIPFSDVNVYGDT 180
Query: 204 LYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRTNDFVVSYITESSKGELLLVLRSI 263
+YA+ +MM+WKVEVK R+DESS ISIS++ VH K +D S IT SSKGELLLVLRSI
Sbjct: 181 IYASGVDMMIWKVEVKIRNDESSLISISVRTVHTKSIDDLTRSNITVSSKGELLLVLRSI 240
Query: 264 SEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGDAMFIGDSQSICVSTKYFPKCLPN 323
S E++QLET KFKVYKL +E EN M +A+K+KSLDGDAMFIGDSQSICVSTK F KCLPN
Sbjct: 241 SVEETQLETNKFKVYKLTEERENGMRKAIKVKSLDGDAMFIGDSQSICVSTKDFRKCLPN 300
Query: 324 CIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDPAHKNLPQPIWIIPTICSKDFED 382
CIYF+NG +PNL QDSGIF LEDK F +HYI+DP H+NLP PIWIIPTICSKD +D
Sbjct: 301 CIYFMNGCNYCVPNLVQDSGIFYLEDKDFGDHYIQDPTHENLPPPIWIIPTICSKDLKD 359
BLAST of Cp4.1LG14g08410 vs. ExPASy TrEMBL
Match:
A0A6J1E5P5 (probable F-box protein At1g65740 OS=Cucurbita moschata OX=3662 GN=LOC111431012 PE=4 SV=1)
HSP 1 Score: 560 bits (1442), Expect = 6.39e-198
Identity = 273/386 (70.73%), Postives = 309/386 (80.05%), Query Frame = 0
Query: 1 MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQ 60
MENSK RDWTALDYDVLGVILNKMVSLYDYLQFS+VCKSWYF+AL HKHQRSII SK PQ
Sbjct: 1 MENSKSRDWTALDYDVLGVILNKMVSLYDYLQFSLVCKSWYFLALHHKHQRSIIASKVPQ 60
Query: 61 LPMLIVPSKDGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFN 120
LPMLIVPSKDGLEKQHCLYD N R VDFKFCFNKRCCGSSFGWLIM +ETL + LFN
Sbjct: 61 LPMLIVPSKDGLEKQHCLYDLTTNIVRSVDFKFCFNKRCCGSSFGWLIMRDETLGIVLFN 120
Query: 121 PFSGTVICLPSIFIEDEPDYAPDRIVKAILTKDPWLYPNDYMVVAIYSSYSRLCLMRAND 180
PFSG VI LP + D+ ++ P I+KAILTKDP LYPNDYMVV I+ +Y RLCL+RAND
Sbjct: 121 PFSGAVIYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVVGIFGTYKRLCLIRAND 180
Query: 181 KSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRT 240
K+WTY YP PNIPF DIN+ DT+YATEN++ VWKVEV+N +DESSSISIS+KMVH KR
Sbjct: 181 KTWTYYYPTPNIPFNDINICRDTIYATENDLDVWKVEVQNSEDESSSISISVKMVHTKRI 240
Query: 241 NDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGD 300
+YITESSKGELL+VLR + + Q ET F+VYKLI E E+++ RAV++KSLDGD
Sbjct: 241 RYIGTAYITESSKGELLVVLRIFNSGEEQFETVDFEVYKLIHENEDELRRAVEVKSLDGD 300
Query: 301 AMFIGDSQSICVSTKYFPKCLPNCIYFI-NGYYNYIPNL---EQDSGIFNLEDKRFANHY 360
A+FIGDSQSICVSTK F CLPN IYF N Y N + QD G+FN ED F +HY
Sbjct: 301 AIFIGDSQSICVSTKEFAGCLPNRIYFTDNRYVNLVVGKLDGTQDLGVFNFEDGSFEDHY 360
Query: 361 IRDPAHKNLPQPIWIIPTICSKDFED 382
I DPA KNLP P+WIIPTICSKD +D
Sbjct: 361 IADPAQKNLPSPMWIIPTICSKDLDD 386
BLAST of Cp4.1LG14g08410 vs. ExPASy TrEMBL
Match:
A0A6J1E923 (probable F-box protein At4g22165 OS=Cucurbita moschata OX=3662 GN=LOC111431007 PE=4 SV=1)
HSP 1 Score: 556 bits (1432), Expect = 4.22e-196
Identity = 273/385 (70.91%), Postives = 307/385 (79.74%), Query Frame = 0
Query: 1 MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQ 60
MENS RDWTALDYDVLGVILNKMVSLYDYLQF++VCKSWYF+ALRHKH+RSIITSK Q
Sbjct: 1 MENSNSRDWTALDYDVLGVILNKMVSLYDYLQFNLVCKSWYFLALRHKHERSIITSKVTQ 60
Query: 61 LPMLIVPSKDGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFN 120
LPMLIVPSKDGLEKQHCLYD +N RPVDFKFCFNKRCCGSSFGWLIM +ETL + LFN
Sbjct: 61 LPMLIVPSKDGLEKQHCLYDLTRNVVRPVDFKFCFNKRCCGSSFGWLIMRDETLGIVLFN 120
Query: 121 PFSGTVICLPSIFIEDEPDYAPDRIVKAILTKDPWLYPNDYMVVAIYSSYSRLCLMRAND 180
PFSGTVI LP + D+ ++ P I+KAILTKDP LYPNDYMVVAI+ +Y RLCL+RAND
Sbjct: 121 PFSGTVIYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVVAIFGTYKRLCLIRAND 180
Query: 181 KSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRT 240
K+WTY YP PNIPF DIN+ DTLYATE + VWKVEV+N +DESSSI IS+KMVH
Sbjct: 181 KTWTYYYPTPNIPFNDINICGDTLYATEYYLNVWKVEVENSEDESSSICISVKMVHTIEM 240
Query: 241 NDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGD 300
V SYITESSKGELL+VLR + + Q ET F+VYKLI E E++M RAV++KSLDGD
Sbjct: 241 GHLVTSYITESSKGELLVVLRILDSGEEQFETVDFEVYKLIHENEDEMRRAVEVKSLDGD 300
Query: 301 AMFIGDSQSICVSTKYFPKCLPNCIYFI-NGYYNYIPNL---EQDSGIFNLEDKRFANHY 360
A+FIGDSQSICVSTK FP CLPN IYF N Y N + QD G FN E+ F + Y
Sbjct: 301 AIFIGDSQSICVSTKEFPGCLPNRIYFTDNRYVNLVVGKLDGTQDLGTFNFENGSFEDQY 360
Query: 361 IRDPAHKNLPQPIWIIPTICSKDFE 381
I DPA KNLP PIWIIPTICSKD +
Sbjct: 361 IADPAQKNLPSPIWIIPTICSKDLD 385
BLAST of Cp4.1LG14g08410 vs. ExPASy TrEMBL
Match:
A0A6J1E5W8 (uncharacterized protein LOC111431008 OS=Cucurbita moschata OX=3662 GN=LOC111431008 PE=4 SV=1)
HSP 1 Score: 469 bits (1208), Expect = 2.15e-163
Identity = 229/318 (72.01%), Postives = 257/318 (80.82%), Query Frame = 0
Query: 1 MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQ 60
MENSK RDWT LDYDVLGVILNKMVSLYDY QFS+VCKSWYF ALRHKHQRSII SK PQ
Sbjct: 1 MENSKSRDWTTLDYDVLGVILNKMVSLYDYFQFSLVCKSWYFHALRHKHQRSIIASKVPQ 60
Query: 61 LPMLIVPSKDGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFN 120
L MLIVP +DG EKQHCLYD +N R VDFKFCFNKRC GSSFGWLIM +ETL + LFN
Sbjct: 61 LAMLIVPLEDGFEKQHCLYDLTRNIVRSVDFKFCFNKRCRGSSFGWLIMRDETLGIVLFN 120
Query: 121 PFSGTVICLPSIFIEDEPDYAPDRIVKAILTKDPWLYPNDYMVVAIYSSYSRLCLMRAND 180
PFSGTVI LP + D+ ++ P I+KAILTKDP LYPNDYMVV I+ +Y RLCL+RAND
Sbjct: 121 PFSGTVIYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVVGIFGTYKRLCLIRAND 180
Query: 181 KSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRT 240
K+WTY YP PNIPF DIN+ DTLYATE + VWKVEV+N +DESSSI IS+KMVH
Sbjct: 181 KTWTYYYPTPNIPFNDINICGDTLYATEYYLNVWKVEVENSEDESSSICISVKMVHTIEM 240
Query: 241 NDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGD 300
V SYITESSKGELL+VLR + + Q ET F+VYKLI E E++M RAV++KSLDGD
Sbjct: 241 GHMVTSYITESSKGELLVVLRILDSGEEQFETVDFEVYKLIHENEDEMRRAVEIKSLDGD 300
Query: 301 AMFIGDSQSICVSTKYFP 318
A+FIGDSQSICVSTK FP
Sbjct: 301 AIFIGDSQSICVSTKEFP 318
BLAST of Cp4.1LG14g08410 vs. TAIR 10
Match:
AT1G68960.1 (Protein of unknown function (DUF295) )
HSP 1 Score: 51.2 bits (121), Expect = 2.1e-06
Identity = 90/355 (25.35%), Postives = 141/355 (39.72%), Query Frame = 0
Query: 70 DGLEKQHCLYDPRKNRTRPVDFKF----CFNKRCCGSSFGWLIMC---EETLDLT-LFNP 129
DG LYDPRK ++ K + GSS GWL + + T+ LT + NP
Sbjct: 51 DGKVVNFNLYDPRKQEQVKIENKILSKEVYESHKLGSSRGWLALLNKKDSTVRLTNILNP 110
Query: 130 FSGTVICLPSIFIEDEPDYAPDRIVKAILTKDPWLYPNDYMVVAIYSSYSRLCLMRANDK 189
S +I LPS+ D+ + + V + +D VVA+ SR+ L R D
Sbjct: 111 -SKKIISLPSL-TRDKYESHVNVSVSSSNEED--------CVVAVKFYGSRVSLCRPGDS 170
Query: 190 SW-------------TYSYPEPNIPFKDINVSSDTLYATE-------------------N 249
W T Y E + F N + D T+ +
Sbjct: 171 EWTRIDVPCPSFHSSTVIYSERDRRFYLNNCNPDYTGPTDFTPKSGLHTPVSGYKRFLFS 230
Query: 250 NMMVWKVEVKNRDDESSSISISLKMVHAKRTNDFVVSYITES--SKGELLL--VLRSISE 309
N + E++N + S I ++V + F+V++ ES KGE+ R +
Sbjct: 231 NFLEEMPELEN-ERRLSRFRIQQQLVESASGQSFIVAWFVESLTDKGEVATWGDTRYNNN 290
Query: 310 EDSQLETTKFKVYKLIDECENDMLRAVKLKSLD-GD-AMFIGDSQSICVSTKYFPKCLPN 369
+D +T K V + +E + + + D GD +F+G+++S C+S K FP PN
Sbjct: 291 KDLCKKTHKIMVIRQDEE------QGIGPYTDDIGDLCIFLGENESFCLSAKDFPGLNPN 350
Query: 370 CIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDPAHKNLPQP---IWIIPTI 376
+YF Y GI++L Y+ D + P P W+ PTI
Sbjct: 351 SVYFAGHGSGY--------GIWDLASCTI--RYLSD----STPPPGRMFWLPPTI 374
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_023552957.1 | 5.72e-292 | 100.00 | probable F-box protein At1g65740 [Cucurbita pepo subsp. pepo] | [more] |
KAG6577578.1 | 7.47e-288 | 98.95 | putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
XP_022923266.1 | 7.47e-288 | 98.95 | probable F-box protein At1g65740 [Cucurbita moschata] | [more] |
XP_023553097.1 | 3.39e-219 | 82.17 | uncharacterized protein LOC111810599 [Cucurbita pepo subsp. pepo] | [more] |
XP_022923394.1 | 3.24e-217 | 81.62 | uncharacterized protein LOC111431103 [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1E6C7 | 3.62e-288 | 98.95 | probable F-box protein At1g65740 OS=Cucurbita moschata OX=3662 GN=LOC111431011 P... | [more] |
A0A6J1E6A0 | 1.57e-217 | 81.62 | uncharacterized protein LOC111431103 OS=Cucurbita moschata OX=3662 GN=LOC1114311... | [more] |
A0A6J1E5P5 | 6.39e-198 | 70.73 | probable F-box protein At1g65740 OS=Cucurbita moschata OX=3662 GN=LOC111431012 P... | [more] |
A0A6J1E923 | 4.22e-196 | 70.91 | probable F-box protein At4g22165 OS=Cucurbita moschata OX=3662 GN=LOC111431007 P... | [more] |
A0A6J1E5W8 | 2.15e-163 | 72.01 | uncharacterized protein LOC111431008 OS=Cucurbita moschata OX=3662 GN=LOC1114310... | [more] |
Match Name | E-value | Identity | Description | |
AT1G68960.1 | 2.1e-06 | 25.35 | Protein of unknown function (DUF295) | [more] |