Cp4.1LG14g07900 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG14g07900
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptiongibberellin-regulated protein 14-like
LocationCp4.1LG14: 6216367 .. 6216960 (-)
RNA-Seq ExpressionCp4.1LG14g07900
SyntenyCp4.1LG14g07900
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAATTTCCTCTGTTTACTGTTCTGATTTTGTTTTCGGCCTTCACCGCCGTCGTTTTCGGTTACGATTCGCCGGCCGCCGCCCCAAAACCCACTAAAACGGCGCATTCTCCGTCTCCGGCGCATTCGCCGGTGGTTTCGCCGCCGACTCACTCTGCATCTCCGTTGACTTCTCCGACTTCTTCTCCACCGGCGAAAACTCCGGCTATTTCTCCGTCCTTGGCGACCCCACCACCGGTATCTCCTCCGAAGGCTCCGGCTGCTGCGCCTGTTTCTTCGCCGGCGGCTAGTCCGGTAGTGAGTGGAGTTTCTCCGCCATCTCCTCTGCCTTCCGATGCTTCTCCGGTGACTGCACCGGTCGGAGCTCCAGTGGAACCAGAAATCCCGGCAAACCCAATCACTGGAGGGACTCCTGTGGAGACGCCGTCGATATTTCCGTCGAGTAGCAGCCCGCCAATGTCGACACCGGCGAGCCTAGCACCGGAAACGGCAGAGCTGCCTGGAAAGGACGCGTCGGCGTCAGGGAAGTACAGAATCGGGGCGGAGGTTATTTTGAGTGGGCTGTCTTTATGGGCCGTTTGGGCCTTTTGA

mRNA sequence

ATGGAGAAATTTCCTCTGTTTACTGTTCTGATTTTGTTTTCGGCCTTCACCGCCGTCGTTTTCGGTTACGATTCGCCGGCCGCCGCCCCAAAACCCACTAAAACGGCGCATTCTCCGTCTCCGGCGCATTCGCCGGTGGTTTCGCCGCCGACTCACTCTGCATCTCCGTTGACTTCTCCGACTTCTTCTCCACCGGCGAAAACTCCGGCTATTTCTCCGTCCTTGGCGACCCCACCACCGGTATCTCCTCCGAAGGCTCCGGCTGCTGCGCCTGTTTCTTCGCCGGCGGCTAGTCCGGTAGTGAGTGGAGTTTCTCCGCCATCTCCTCTGCCTTCCGATGCTTCTCCGGTGACTGCACCGGTCGGAGCTCCAGTGGAACCAGAAATCCCGGCAAACCCAATCACTGGAGGGACTCCTGTGGAGACGCCGTCGATATTTCCGTCGAGTAGCAGCCCGCCAATGTCGACACCGGCGAGCCTAGCACCGGAAACGGCAGAGCTGCCTGGAAAGGACGCGTCGGCGTCAGGGAAGTACAGAATCGGGGCGGAGGTTATTTTGAGTGGGCTGTCTTTATGGGCCGTTTGGGCCTTTTGA

Coding sequence (CDS)

ATGGAGAAATTTCCTCTGTTTACTGTTCTGATTTTGTTTTCGGCCTTCACCGCCGTCGTTTTCGGTTACGATTCGCCGGCCGCCGCCCCAAAACCCACTAAAACGGCGCATTCTCCGTCTCCGGCGCATTCGCCGGTGGTTTCGCCGCCGACTCACTCTGCATCTCCGTTGACTTCTCCGACTTCTTCTCCACCGGCGAAAACTCCGGCTATTTCTCCGTCCTTGGCGACCCCACCACCGGTATCTCCTCCGAAGGCTCCGGCTGCTGCGCCTGTTTCTTCGCCGGCGGCTAGTCCGGTAGTGAGTGGAGTTTCTCCGCCATCTCCTCTGCCTTCCGATGCTTCTCCGGTGACTGCACCGGTCGGAGCTCCAGTGGAACCAGAAATCCCGGCAAACCCAATCACTGGAGGGACTCCTGTGGAGACGCCGTCGATATTTCCGTCGAGTAGCAGCCCGCCAATGTCGACACCGGCGAGCCTAGCACCGGAAACGGCAGAGCTGCCTGGAAAGGACGCGTCGGCGTCAGGGAAGTACAGAATCGGGGCGGAGGTTATTTTGAGTGGGCTGTCTTTATGGGCCGTTTGGGCCTTTTGA

Protein sequence

MEKFPLFTVLILFSAFTAVVFGYDSPAAAPKPTKTAHSPSPAHSPVVSPPTHSASPLTSPTSSPPAKTPAISPSLATPPPVSPPKAPAAAPVSSPAASPVVSGVSPPSPLPSDASPVTAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASASGKYRIGAEVILSGLSLWAVWAF
Homology
BLAST of Cp4.1LG14g07900 vs. NCBI nr
Match: XP_023552940.1 (gibberellin-regulated protein 14-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 345 bits (885), Expect = 6.51e-119
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0

Query: 1   MEKFPLFTVLILFSAFTAVVFGYDSPAAAPKPTKTAHSPSPAHSPVVSPPTHSASPLTSP 60
           MEKFPLFTVLILFSAFTAVVFGYDSPAAAPKPTKTAHSPSPAHSPVVSPPTHSASPLTSP
Sbjct: 1   MEKFPLFTVLILFSAFTAVVFGYDSPAAAPKPTKTAHSPSPAHSPVVSPPTHSASPLTSP 60

Query: 61  TSSPPAKTPAISPSLATPPPVSPPKAPAAAPVSSPAASPVVSGVSPPSPLPSDASPVTAP 120
           TSSPPAKTPAISPSLATPPPVSPPKAPAAAPVSSPAASPVVSGVSPPSPLPSDASPVTAP
Sbjct: 61  TSSPPAKTPAISPSLATPPPVSPPKAPAAAPVSSPAASPVVSGVSPPSPLPSDASPVTAP 120

Query: 121 VGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASASGKYRI 180
           VGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASASGKYRI
Sbjct: 121 VGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASASGKYRI 180

Query: 181 GAEVILSGLSLWAVWAF 197
           GAEVILSGLSLWAVWAF
Sbjct: 181 GAEVILSGLSLWAVWAF 197

BLAST of Cp4.1LG14g07900 vs. NCBI nr
Match: XP_022932347.1 (gibberellin-regulated protein 14-like [Cucurbita moschata])

HSP 1 Score: 333 bits (854), Expect = 3.97e-114
Identity = 194/201 (96.52%), Postives = 195/201 (97.01%), Query Frame = 0

Query: 1   MEKFPLFTVLILFSAFTAVVFGYDSPAAAPKPTKTAHSPSPAHSPVVSPPTHSASPLTSP 60
           MEKF LFTVLILFSAFTAVV GYDSPAAAPKPTKTAHSPSPAHSPVVSPPTHSASPLTSP
Sbjct: 1   MEKFALFTVLILFSAFTAVVLGYDSPAAAPKPTKTAHSPSPAHSPVVSPPTHSASPLTSP 60

Query: 61  TSSPPAKTPAISPSLATPPPVSPPKAPAAAPVSSPAASPVVSGVSP----PSPLPSDASP 120
           TSSPPAKTPAISPSLATPPPVSPPKAPAAAPVSSPAASPVVSGVSP    PSPLPSDASP
Sbjct: 61  TSSPPAKTPAISPSLATPPPVSPPKAPAAAPVSSPAASPVVSGVSPILSPPSPLPSDASP 120

Query: 121 VTAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASASG 180
           VTAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASASG
Sbjct: 121 VTAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASASG 180

Query: 181 KYRIGAEVILSGLSLWAVWAF 197
           KYRIGAEVILSGLS+WAVWAF
Sbjct: 181 KYRIGAEVILSGLSIWAVWAF 201

BLAST of Cp4.1LG14g07900 vs. NCBI nr
Match: XP_023007601.1 (gibberellin-regulated protein 14-like [Cucurbita maxima])

HSP 1 Score: 315 bits (808), Expect = 4.05e-107
Identity = 185/201 (92.04%), Postives = 188/201 (93.53%), Query Frame = 0

Query: 1   MEKFPLFTVLILFSAFTAVVFGYDSPAAAPKPTKTAHSPSPAHSPVVSPPTHSASPLTSP 60
           ME F LFTVLILFSAFTAVV  YDS AAAPKPTKTA+SPSPAHSPV SPP+HSASPLTSP
Sbjct: 1   MENFALFTVLILFSAFTAVVLAYDSTAAAPKPTKTAYSPSPAHSPVFSPPSHSASPLTSP 60

Query: 61  TSSPPAKTPAISPSLATPPPVSPPKAPAAAPVSSPAASPVVSGVSP----PSPLPSDASP 120
           TSSPPAKTPAISPSL TPPPVSPPK PAAAPVSSPAASPVVSGVSP    PSPLPSDASP
Sbjct: 61  TSSPPAKTPAISPSLVTPPPVSPPKTPAAAPVSSPAASPVVSGVSPVLSPPSPLPSDASP 120

Query: 121 VTAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASASG 180
           VTAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDAS SG
Sbjct: 121 VTAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASTSG 180

Query: 181 KYRIGAEVILSGLSLWAVWAF 197
           KYRIGAEVILSGLS+WAVWAF
Sbjct: 181 KYRIGAEVILSGLSIWAVWAF 201

BLAST of Cp4.1LG14g07900 vs. NCBI nr
Match: KAG7015581.1 (hypothetical protein SDJN02_23217, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 306 bits (783), Expect = 4.59e-102
Identity = 181/187 (96.79%), Postives = 181/187 (96.79%), Query Frame = 0

Query: 1   MEKFPLFTVLILFSAFTAVVFGYDSPAAAPKPTKTAHSPSPAHSPVVSPPTHSASPLTSP 60
           MEKF LFTVLILFSAFTAVV GYDSPAAAPKPTKTAHSPSPAHSPVVSPPTHSASPLTSP
Sbjct: 1   MEKFALFTVLILFSAFTAVVLGYDSPAAAPKPTKTAHSPSPAHSPVVSPPTHSASPLTSP 60

Query: 61  TSSPPAKTPAISPSLATPPPVSPPKAPAAAPVSSPAASPVVSGVSP----PSPLPSDASP 120
           TSSPPAKTPAISPSLATPPPVSPPKAPAAAPVSSPAASPVVSGVSP    PSPLPSDASP
Sbjct: 61  TSSPPAKTPAISPSLATPPPVSPPKAPAAAPVSSPAASPVVSGVSPVLSPPSPLPSDASP 120

Query: 121 VTAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASASG 180
           VTAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASASG
Sbjct: 121 VTAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASASG 180

Query: 181 KYRIGAE 183
           KYRIGAE
Sbjct: 181 KYRIGAE 187

BLAST of Cp4.1LG14g07900 vs. NCBI nr
Match: KAG6577522.1 (hypothetical protein SDJN03_25096, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 303 bits (775), Expect = 1.54e-101
Identity = 180/187 (96.26%), Postives = 180/187 (96.26%), Query Frame = 0

Query: 1   MEKFPLFTVLILFSAFTAVVFGYDSPAAAPKPTKTAHSPSPAHSPVVSPPTHSASPLTSP 60
           MEKF LFTVLILFSAFTAVV GYDSPAAAPKPTKTAHS SPAHSPVVSPPTHSASPLTSP
Sbjct: 1   MEKFALFTVLILFSAFTAVVLGYDSPAAAPKPTKTAHSSSPAHSPVVSPPTHSASPLTSP 60

Query: 61  TSSPPAKTPAISPSLATPPPVSPPKAPAAAPVSSPAASPVVSGVSP----PSPLPSDASP 120
           TSSPPAKTPAISPSLATPPPVSPPKAPAAAPVSSPAASPVVSGVSP    PSPLPSDASP
Sbjct: 61  TSSPPAKTPAISPSLATPPPVSPPKAPAAAPVSSPAASPVVSGVSPVLSPPSPLPSDASP 120

Query: 121 VTAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASASG 180
           VTAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASASG
Sbjct: 121 VTAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASASG 180

Query: 181 KYRIGAE 183
           KYRIGAE
Sbjct: 181 KYRIGAE 187

BLAST of Cp4.1LG14g07900 vs. ExPASy TrEMBL
Match: A0A6J1EWE6 (gibberellin-regulated protein 14-like OS=Cucurbita moschata OX=3662 GN=LOC111438730 PE=4 SV=1)

HSP 1 Score: 333 bits (854), Expect = 1.92e-114
Identity = 194/201 (96.52%), Postives = 195/201 (97.01%), Query Frame = 0

Query: 1   MEKFPLFTVLILFSAFTAVVFGYDSPAAAPKPTKTAHSPSPAHSPVVSPPTHSASPLTSP 60
           MEKF LFTVLILFSAFTAVV GYDSPAAAPKPTKTAHSPSPAHSPVVSPPTHSASPLTSP
Sbjct: 1   MEKFALFTVLILFSAFTAVVLGYDSPAAAPKPTKTAHSPSPAHSPVVSPPTHSASPLTSP 60

Query: 61  TSSPPAKTPAISPSLATPPPVSPPKAPAAAPVSSPAASPVVSGVSP----PSPLPSDASP 120
           TSSPPAKTPAISPSLATPPPVSPPKAPAAAPVSSPAASPVVSGVSP    PSPLPSDASP
Sbjct: 61  TSSPPAKTPAISPSLATPPPVSPPKAPAAAPVSSPAASPVVSGVSPILSPPSPLPSDASP 120

Query: 121 VTAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASASG 180
           VTAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASASG
Sbjct: 121 VTAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASASG 180

Query: 181 KYRIGAEVILSGLSLWAVWAF 197
           KYRIGAEVILSGLS+WAVWAF
Sbjct: 181 KYRIGAEVILSGLSIWAVWAF 201

BLAST of Cp4.1LG14g07900 vs. ExPASy TrEMBL
Match: A0A6J1L107 (gibberellin-regulated protein 14-like OS=Cucurbita maxima OX=3661 GN=LOC111500173 PE=4 SV=1)

HSP 1 Score: 315 bits (808), Expect = 1.96e-107
Identity = 185/201 (92.04%), Postives = 188/201 (93.53%), Query Frame = 0

Query: 1   MEKFPLFTVLILFSAFTAVVFGYDSPAAAPKPTKTAHSPSPAHSPVVSPPTHSASPLTSP 60
           ME F LFTVLILFSAFTAVV  YDS AAAPKPTKTA+SPSPAHSPV SPP+HSASPLTSP
Sbjct: 1   MENFALFTVLILFSAFTAVVLAYDSTAAAPKPTKTAYSPSPAHSPVFSPPSHSASPLTSP 60

Query: 61  TSSPPAKTPAISPSLATPPPVSPPKAPAAAPVSSPAASPVVSGVSP----PSPLPSDASP 120
           TSSPPAKTPAISPSL TPPPVSPPK PAAAPVSSPAASPVVSGVSP    PSPLPSDASP
Sbjct: 61  TSSPPAKTPAISPSLVTPPPVSPPKTPAAAPVSSPAASPVVSGVSPVLSPPSPLPSDASP 120

Query: 121 VTAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASASG 180
           VTAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDAS SG
Sbjct: 121 VTAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASTSG 180

Query: 181 KYRIGAEVILSGLSLWAVWAF 197
           KYRIGAEVILSGLS+WAVWAF
Sbjct: 181 KYRIGAEVILSGLSIWAVWAF 201

BLAST of Cp4.1LG14g07900 vs. ExPASy TrEMBL
Match: A0A5A7VJY8 (Extensin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00140 PE=4 SV=1)

HSP 1 Score: 235 bits (600), Expect = 6.35e-76
Identity = 143/197 (72.59%), Postives = 160/197 (81.22%), Query Frame = 0

Query: 1   MEKFPLFTVLILFSAFTAVVFGYDSPAAAPKPTKTAHSPSPAHSPVVSPPTHSASPLTSP 60
           M  F LFTVL   S F  +VF YDSPAA+PKP KTAHSPSPAHSPVVSPP+ S SP  SP
Sbjct: 1   MGNFALFTVLFFLSPFIGLVFAYDSPAASPKPPKTAHSPSPAHSPVVSPPSRSLSPSKSP 60

Query: 61  TSSPPAKTPAISPSLATPPPVSPPKAPAAAPVSSPAASPVVSGVSPPSPLPSDASPVTAP 120
           T+SPP  TP ISP+LATPP V+P KAPAA P+SSP+ +  VS  SPPSPLP DASPV   
Sbjct: 61  TASPPMLTPEISPALATPPSVAPSKAPAAVPISSPSENSPVS--SPPSPLPFDASPV--- 120

Query: 121 VGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASASGKYRI 180
            GAPVEPEIPANPI+GG+PV TPSIFPSSSSPPM+TP +LAPETAE PG DASASG+Y+I
Sbjct: 121 -GAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTNLAPETAERPGNDASASGRYKI 180

Query: 181 GAEVILSGLSLWAVWAF 197
           G EV+LSGLS+WA WAF
Sbjct: 181 GVEVMLSGLSIWAAWAF 191

BLAST of Cp4.1LG14g07900 vs. ExPASy TrEMBL
Match: A0A0A0L269 (Lipid binding protein OS=Cucumis sativus OX=3659 GN=Csa_3G047810 PE=4 SV=1)

HSP 1 Score: 234 bits (596), Expect = 2.66e-75
Identity = 144/198 (72.73%), Postives = 161/198 (81.31%), Query Frame = 0

Query: 1   MEKFPLF-TVLILFSAFTAVVFGYDSPAAAPKPTKTAHSPSPAHSPVVSPPTHSASPLTS 60
           M KF LF T+L LFS F  +VF  DSPAA+PKP KT HSPSPAHSPVVSPP+H+ SP  S
Sbjct: 1   MAKFALFITLLFLFSPFIGLVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKS 60

Query: 61  PTSSPPAKTPAISPSLATPPPVSPPKAPAAAPVSSPAASPVVSGVSPPSPLPSDASPVTA 120
           P +SPP  TP ISP+LATPP V+P KAPAA P+SSP+ +  +S  SPPSPLP DASPV  
Sbjct: 61  PAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSENSPLS--SPPSPLPFDASPV-- 120

Query: 121 PVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASASGKYR 180
             GAPVEPEIPANPI+GG+PV TPSIFPSSSSPPM+TP SLAPETAE PG DASASGKY+
Sbjct: 121 --GAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASASGKYK 180

Query: 181 IGAEVILSGLSLWAVWAF 197
           IG EVILSGLS+WA WAF
Sbjct: 181 IGVEVILSGLSIWAAWAF 192

BLAST of Cp4.1LG14g07900 vs. ExPASy TrEMBL
Match: A0A6J1DWL9 (classical arabinogalactan protein 4-like OS=Momordica charantia OX=3673 GN=LOC111024744 PE=4 SV=1)

HSP 1 Score: 229 bits (584), Expect = 2.73e-73
Identity = 146/206 (70.87%), Postives = 161/206 (78.16%), Query Frame = 0

Query: 1   MEKFPLFTVLILFSAFTAVVFGYDSPAAAPKPTKTAHSPSPAHSPVVSPPTHSASPLTSP 60
           MEK    TVL+LF+ FT VV  YD+PA +PKPTKT HSP P HSP VS P+HSASP  SP
Sbjct: 1   MEKLAWLTVLVLFAPFTGVVLAYDAPAPSPKPTKTPHSPPPVHSPAVSRPSHSASPSKSP 60

Query: 61  TSSPPAKTPAISPSLATPPPVSPPKAPAAAPVSSPAASPVVSGVSP----PSPLPSDASP 120
            +SPPA TP ISP+L+TPP  SP +APAAAP SSP ASPV S VSP    PSP PS ASP
Sbjct: 61  AASPPATTPTISPALSTPPAASP-EAPAAAPASSPVASPVGSEVSPVSSPPSPPPSVASP 120

Query: 121 V----TAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDA 180
           V    T P G+P EPEIPANPITGG+PVETPSIFPSSSSPPMS+P SLAPETAE PG DA
Sbjct: 121 VSTPATTPAGSPPEPEIPANPITGGSPVETPSIFPSSSSPPMSSPGSLAPETAERPGNDA 180

Query: 181 SASG-KYRIGAEVILSGLSLWAVWAF 197
           SAS  KY+IGAEVILSG+S+WA WAF
Sbjct: 181 SASEWKYKIGAEVILSGISIWAAWAF 205

BLAST of Cp4.1LG14g07900 vs. TAIR 10
Match: AT4G18670.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 42.0 bits (97), Expect = 6.6e-04
Identity = 54/151 (35.76%), Postives = 76/151 (50.33%), Query Frame = 0

Query: 25  SPAAAPKPTKTAHSPSPAHSPVVSP--PTHSASPLTSPTSSPPAKTPAISPSLATPPPVS 84
           +P     P  +  +P+P  SP  SP  PT   SP +SPT+  P  +P  SPS++  PP++
Sbjct: 474 TPTPGGSPPSSPTTPTPGGSPPSSPTTPTPGGSPPSSPTTPSPGGSPP-SPSISPSPPIT 533

Query: 85  PPKAPAAAPVSSPAASPVVSGVSPPSPLPSDASPVTAPV----GAPVEPEIPANPITGGT 144
            P  P+    +SP + P  S  +P SP+PS  +P T P     G    P IP+ P TG +
Sbjct: 534 VPSPPSTP--TSPGSPPSPSSPTPSSPIPSPPTPSTPPTPISPGQNSPPIIPSPPFTGPS 593

Query: 145 PVETPS------------IFPSSSSPPMSTP 158
           P  +PS            + P+ SSPP STP
Sbjct: 594 PPSSPSPPLPPVIPSPPIVGPTPSSPPPSTP 621

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_023552940.16.51e-119100.00gibberellin-regulated protein 14-like [Cucurbita pepo subsp. pepo][more]
XP_022932347.13.97e-11496.52gibberellin-regulated protein 14-like [Cucurbita moschata][more]
XP_023007601.14.05e-10792.04gibberellin-regulated protein 14-like [Cucurbita maxima][more]
KAG7015581.14.59e-10296.79hypothetical protein SDJN02_23217, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6577522.11.54e-10196.26hypothetical protein SDJN03_25096, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
A0A6J1EWE61.92e-11496.52gibberellin-regulated protein 14-like OS=Cucurbita moschata OX=3662 GN=LOC111438... [more]
A0A6J1L1071.96e-10792.04gibberellin-regulated protein 14-like OS=Cucurbita maxima OX=3661 GN=LOC11150017... [more]
A0A5A7VJY86.35e-7672.59Extensin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00140 ... [more]
A0A0A0L2692.66e-7572.73Lipid binding protein OS=Cucumis sativus OX=3659 GN=Csa_3G047810 PE=4 SV=1[more]
A0A6J1DWL92.73e-7370.87classical arabinogalactan protein 4-like OS=Momordica charantia OX=3673 GN=LOC11... [more]
Match NameE-valueIdentityDescription
AT4G18670.16.6e-0435.76Leucine-rich repeat (LRR) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 47..59
score: 38.46
coord: 62..83
score: 35.45
coord: 103..120
score: 36.67
coord: 27..43
score: 38.82
coord: 84..100
score: 24.71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..90
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 137..158
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..61
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..173

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG14g07900.1Cp4.1LG14g07900.1mRNA