Cp4.1LG14g01780 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG14g01780
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	dehydrin DHN1-like
Location	Cp4.1LG14: 3403413 .. 3403829 (+)
RNA-Seq Expression	Cp4.1LG14g01780
Synteny	Cp4.1LG14g01780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACATTACCAGAACCAGTACAGCGCACAATCTGGCGCCGACCAGTACGGCAACCCAATTCGCCAGACCGATGAATACGGCAACGTCATTTCCGACACCGCACAGCACGTCGACCCACTTCGCCGGACGGACGAATTCCGTGGGACCGACCAGTATGGCAACCCAATTCATCGGACCGACCAGCACGGTGTCGGTGACCCAACTGGACGCACTGGCACAGGCACTGGCACTGGAATGTATGAAGGAGGCGGCGGAGGGCAGCAGCAGCAGCAGAGGGGTGGAATGTTTCATCATGATAAGCCGGTATCGACGGGGGGATCGGTCGGGTACACGACGGGGGAGCAGGGGGAGCGTCATGAGAAGAAAGGGATGATGGAGAAGATTAAGGAGAAGCTTCCGGGAGGAAACCAATGA

mRNA sequence

ATGGCACATTACCAGAACCAGTACAGCGCACAATCTGGCGCCGACCAGTACGGCAACCCAATTCGCCAGACCGATGAATACGGCAACGTCATTTCCGACACCGCACAGCACGTCGACCCACTTCGCCGGACGGACGAATTCCGTGGGACCGACCAGTATGGCAACCCAATTCATCGGACCGACCAGCACGGTGTCGGTGACCCAACTGGACGCACTGGCACAGGCACTGGCACTGGAATGTATGAAGGAGGCGGCGGAGGGCAGCAGCAGCAGCAGAGGGGTGGAATGTTTCATCATGATAAGCCGGTATCGACGGGGGGATCGGTCGGGTACACGACGGGGGAGCAGGGGGAGCGTCATGAGAAGAAAGGGATGATGGAGAAGATTAAGGAGAAGCTTCCGGGAGGAAACCAATGA

Coding sequence (CDS)

ATGGCACATTACCAGAACCAGTACAGCGCACAATCTGGCGCCGACCAGTACGGCAACCCAATTCGCCAGACCGATGAATACGGCAACGTCATTTCCGACACCGCACAGCACGTCGACCCACTTCGCCGGACGGACGAATTCCGTGGGACCGACCAGTATGGCAACCCAATTCATCGGACCGACCAGCACGGTGTCGGTGACCCAACTGGACGCACTGGCACAGGCACTGGCACTGGAATGTATGAAGGAGGCGGCGGAGGGCAGCAGCAGCAGCAGAGGGGTGGAATGTTTCATCATGATAAGCCGGTATCGACGGGGGGATCGGTCGGGTACACGACGGGGGAGCAGGGGGAGCGTCATGAGAAGAAAGGGATGATGGAGAAGATTAAGGAGAAGCTTCCGGGAGGAAACCAATGA

Protein sequence

MAHYQNQYSAQSGADQYGNPIRQTDEYGNVISDTAQHVDPLRRTDEFRGTDQYGNPIHRTDQHGVGDPTGRTGTGTGTGMYEGGGGGQQQQQRGGMFHHDKPVSTGGSVGYTTGEQGERHEKKGMMEKIKEKLPGGNQ

Homology

[Close]

BLAST of Cp4.1LG14g01780 vs. ExPASy Swiss-Prot
Match: P28641 (Dehydrin DHN3 OS=Pisum sativum OX=3888 GN=DHN3 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.1e-09
Identity = 60/168 (35.71%), Postives = 73/168 (43.45%), Query Frame = 0


Query: 1   MAHYQNQYSAQSG-ADQYGNPIRQTDEYGNVISDTA--------QHVDPL--------RR 60
           M+ YQNQY AQ+G  D+YGNP+ Q D+YGN IS           QH              
Sbjct: 1   MSQYQNQYGAQTGMTDEYGNPVNQVDQYGNPISGGGGLTGEAGRQHYGTTGGATGQGHGH 60

Query: 61  TDEFRGTDQ---YGNPIHRTDQHGVGDPTGRTGTGTGTGMYEGGGGGQQQQQRGGMFHHD 120
             + RG DQ   YG        +G     G T TG+G G   G GG       G      
Sbjct: 61  GQQHRGVDQTTGYGTHTGGVGGYGTKPEYGSTNTGSGYGTGTGYGGSGTNPDYGS----- 120

Query: 121 KPVSTGGSVGYTTGEQG---------ERH-EKKGMMEKIKEKLPGGNQ 139
              +TG   G  TG  G         E H +KKG+M+KIKEK+PG  Q
Sbjct: 121 --TNTGSGYGTGTGYGGSGTTEYVREEHHGDKKGVMDKIKEKIPGTEQ 161

[Close]

BLAST of Cp4.1LG14g01780 vs. ExPASy Swiss-Prot
Match: P28640 (Dehydrin DHN2 OS=Pisum sativum OX=3888 GN=DHN2 PE=2 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.7e-09
Identity = 57/143 (39.86%), Postives = 70/143 (48.95%), Query Frame = 0


Query: 1   MAHYQNQYSAQS-GADQYGNPIRQTDEYGNVISDTAQHVDPLRRTDEFRGTDQYGNPIHR 60
           M+ YQNQY AQ+   D+YGNP+ Q D+YGN IS           T E  G   YG     
Sbjct: 1   MSQYQNQYGAQTRKTDEYGNPMNQVDQYGNPISGGG------GLTGE-AGRQHYGTTGGA 60

Query: 61  TDQHGVGDPTGRTGTGTGTGMYEGGGGGQQQQQRGGMFHHDKPVSTG---GSVGYTTGEQ 120
           TD HG G         TG G + GG GG   +   G  +      TG   G  G T   +
Sbjct: 61  TD-HGHGQQHRGVDQTTGYGTHTGGVGGYGTKPEYGSTNTGSGYGTGTGYGGSGTTEYVR 120

Query: 121 GERH-EKKGMMEKIKEKLPGGNQ 139
            E H +KKG+M+KIKEK+PG  Q
Sbjct: 121 EEHHGDKKGVMDKIKEKIPGTEQ 135

[Close]

BLAST of Cp4.1LG14g01780 vs. ExPASy Swiss-Prot
Match: A8CVF3 (Dehydrin DHN1 OS=Avicennia marina OX=82927 GN=DHN1 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 6.1e-09
Identity = 62/150 (41.33%), Postives = 74/150 (49.33%), Query Frame = 0


Query: 1   MAHYQNQYSAQSGADQYGNPIRQTDEYGNVISDTAQHVDPLRRTDEFRGTDQYGNPI--- 60
           MA Y +QY  Q+  D+YGNPIRQT E+G   +  A        T    GTDQ    +   
Sbjct: 1   MAEYGDQYGRQT--DEYGNPIRQTGEFGATGAYGANQQYGTTGTTVGYGTDQCVTTVTTG 60

Query: 61  -HRTDQHGVGDPTGRTGTG----TG-TGMY--EGGG---GGQQQQQRGGMFHHDKPVSTG 120
             +TDQ+G    TG  GT     TG TG Y   GGG   G       GG   H +  S+G
Sbjct: 61  AQKTDQYGTPGTTGAYGTDQYGTTGTTGEYGTHGGGIAPGATDAGLAGGGGGHRRLGSSG 120

Query: 121 GSVGYTTGEQGERHEKKGMMEKIKEKLPGG 137
            S     G+ G R  KKG+ EKIKEKLPGG
Sbjct: 121 SSSSEDDGQGGRR--KKGIKEKIKEKLPGG 146

[Close]

BLAST of Cp4.1LG14g01780 vs. ExPASy Swiss-Prot
Match: P28639 (Dehydrin DHN1 OS=Pisum sativum OX=3888 GN=DHN1 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 6.1e-09
Identity = 56/144 (38.89%), Postives = 69/144 (47.92%), Query Frame = 0


Query: 1   MAHYQNQYSAQSG-ADQYGNPIRQTDEYGNVISDTAQHVDPLRRTDEFRGTDQYGNPIHR 60
           M+ YQNQY AQ+G  D+YGNP+ Q D+YGN IS           T E  G   +G     
Sbjct: 1   MSQYQNQYGAQTGMTDEYGNPVNQVDQYGNPISGGG-------FTGE-AGRQHFGTTGGA 60

Query: 61  TDQ-HGVGDPTGRTGTGTGTGMYEGGGGGQQQQQRGGMFHHDKPVSTG-GSVGYTTGE-- 120
           TD  HG G         TG G + GG GG       G  +      TG G  G  T E  
Sbjct: 61  TDHGHGHGQQHRGVDQTTGYGTHTGGVGGYGTNPEYGNTNTGSGYGTGTGYGGSGTNEYV 120

Query: 121 -QGERHEKKGMMEKIKEKLPGGNQ 139
            +    +KKG+M+KIKEK+PG  Q
Sbjct: 121 REDHHGDKKGVMDKIKEKIPGTEQ 136

[Close]

BLAST of Cp4.1LG14g01780 vs. ExPASy Swiss-Prot
Match: P30185 (Dehydrin Rab18 OS=Arabidopsis thaliana OX=3702 GN=RAB18 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 4.8e-06
Identity = 65/190 (34.21%), Postives = 76/190 (40.00%), Query Frame = 0


Query: 1   MAHYQNQYSAQSGADQYGNPIRQT-DEYGNVISDTAQHVDPLRRTDEFRGTDQYGNPIHR 60
           MA YQN+   Q+  D+YGNPI+Q  DEYGN +                 G   YG     
Sbjct: 1   MASYQNRPGGQA-TDEYGNPIQQQYDEYGNPMGGGGYGTG---GGGGATGGQGYGTGGQG 60

Query: 61  TDQHGVGDPTGRTGTGTGTGM--YEGGGG----GQQQQQR------GGMF---------- 120
               G G  TG  G GTGTG   +  GGG    GQ+Q  +      GGM           
Sbjct: 61  YGSGGQGYGTGGQGYGTGTGTEGFGTGGGARHHGQEQLHKESGGGLGGMLHRSGSGSSSS 120

Query: 121 ------------------------HHDK----PVSTGGSVGYTTGEQ-GERHEKKGMMEK 139
                                   HHD+        G   GY  G   GE HEKKGMM+K
Sbjct: 121 SEDDGQGGRRKKGITQKIKEKLPGHHDQSGQAQAMGGMGSGYDAGGYGGEHHEKKGMMDK 180

[Close]

BLAST of Cp4.1LG14g01780 vs. NCBI nr
Match: XP_023553197.1 (dehydrin DHN3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 283 bits (725), Expect = 1.89e-96
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MAHYQNQYSAQSGADQYGNPIRQTDEYGNVISDTAQHVDPLRRTDEFRGTDQYGNPIHRT 60
           MAHYQNQYSAQSGADQYGNPIRQTDEYGNVISDTAQHVDPLRRTDEFRGTDQYGNPIHRT
Sbjct: 1   MAHYQNQYSAQSGADQYGNPIRQTDEYGNVISDTAQHVDPLRRTDEFRGTDQYGNPIHRT 60

Query: 61  DQHGVGDPTGRTGTGTGTGMYEGGGGGQQQQQRGGMFHHDKPVSTGGSVGYTTGEQGERH 120
           DQHGVGDPTGRTGTGTGTGMYEGGGGGQQQQQRGGMFHHDKPVSTGGSVGYTTGEQGERH
Sbjct: 61  DQHGVGDPTGRTGTGTGTGMYEGGGGGQQQQQRGGMFHHDKPVSTGGSVGYTTGEQGERH 120

Query: 121 EKKGMMEKIKEKLPGGNQ 138
           EKKGMMEKIKEKLPGGNQ
Sbjct: 121 EKKGMMEKIKEKLPGGNQ 138

[Close]

BLAST of Cp4.1LG14g01780 vs. NCBI nr
Match: KAG6577230.1 (hypothetical protein SDJN03_24804, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 255 bits (651), Expect = 3.00e-85
Identity = 129/138 (93.48%), Postives = 129/138 (93.48%), Query Frame = 0


Query: 1   MAHYQNQYSAQSGADQYGNPIRQTDEYGNVISDTAQHVDPLRRTDEFRGTDQYGNPIHRT 60
           MAHYQNQYSAQSGADQYGNPIRQTDEYGNVISDTAQH DPLRRTDEFRGTDQYGNPIHRT
Sbjct: 1   MAHYQNQYSAQSGADQYGNPIRQTDEYGNVISDTAQHGDPLRRTDEFRGTDQYGNPIHRT 60

Query: 61  DQHGVGDPTGRTGTGTGTGMYEGGGGGQQQQQRGGMFHHDKPVSTGGSVGYTTGEQGERH 120
           DQHGVGDPTGRT   TGTGMYEG    QQQQQRGGMFHHDKPVSTGGSVGYTT EQGERH
Sbjct: 61  DQHGVGDPTGRT---TGTGMYEGQ---QQQQQRGGMFHHDKPVSTGGSVGYTTAEQGERH 120

Query: 121 EKKGMMEKIKEKLPGGNQ 138
           EKKGMMEKIKEKLPGGNQ
Sbjct: 121 EKKGMMEKIKEKLPGGNQ 132

[Close]

BLAST of Cp4.1LG14g01780 vs. NCBI nr
Match: XP_022929430.1 (dehydrin DHN1-like [Cucurbita moschata])

HSP 1 Score: 254 bits (648), Expect = 8.89e-85
Identity = 129/138 (93.48%), Postives = 129/138 (93.48%), Query Frame = 0


Query: 1   MAHYQNQYSAQSGADQYGNPIRQTDEYGNVISDTAQHVDPLRRTDEFRGTDQYGNPIHRT 60
           MAHYQNQYSAQSGADQYGNPIRQTDEYGNVISDTAQH DPLRRTDEFRGTDQYGNPIHRT
Sbjct: 1   MAHYQNQYSAQSGADQYGNPIRQTDEYGNVISDTAQHGDPLRRTDEFRGTDQYGNPIHRT 60

Query: 61  DQHGVGDPTGRTGTGTGTGMYEGGGGGQQQQQRGGMFHHDKPVSTGGSVGYTTGEQGERH 120
           DQHGVGDPTGRT   TGTGMYEG    QQQQQRGGMFHHDKPVSTGGSVGYTT EQGERH
Sbjct: 61  DQHGVGDPTGRT---TGTGMYEGRQ--QQQQQRGGMFHHDKPVSTGGSVGYTTAEQGERH 120

Query: 121 EKKGMMEKIKEKLPGGNQ 138
           EKKGMMEKIKEKLPGGNQ
Sbjct: 121 EKKGMMEKIKEKLPGGNQ 133

[Close]

BLAST of Cp4.1LG14g01780 vs. NCBI nr
Match: KAG7015320.1 (hypothetical protein SDJN02_22955, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 253 bits (646), Expect = 1.68e-84
Identity = 128/138 (92.75%), Postives = 128/138 (92.75%), Query Frame = 0


Query: 1   MAHYQNQYSAQSGADQYGNPIRQTDEYGNVISDTAQHVDPLRRTDEFRGTDQYGNPIHRT 60
           MAHYQNQYSAQSGADQYGNPIRQTDEYGNVISDTAQ  DPLRRTDEFRGTDQYGNPIHRT
Sbjct: 1   MAHYQNQYSAQSGADQYGNPIRQTDEYGNVISDTAQQGDPLRRTDEFRGTDQYGNPIHRT 60

Query: 61  DQHGVGDPTGRTGTGTGTGMYEGGGGGQQQQQRGGMFHHDKPVSTGGSVGYTTGEQGERH 120
           DQHGVGDPTGRT   TGTGMYEG    QQQQQRGGMFHHDKPVSTGGSVGYTT EQGERH
Sbjct: 61  DQHGVGDPTGRT---TGTGMYEG----QQQQQRGGMFHHDKPVSTGGSVGYTTAEQGERH 120

Query: 121 EKKGMMEKIKEKLPGGNQ 138
           EKKGMMEKIKEKLPGGNQ
Sbjct: 121 EKKGMMEKIKEKLPGGNQ 131

[Close]

BLAST of Cp4.1LG14g01780 vs. NCBI nr
Match: XP_038888416.1 (dehydrin Xero 1-like [Benincasa hispida])

HSP 1 Score: 140 bits (354), Expect = 2.26e-40
Identity = 78/138 (56.52%), Postives = 90/138 (65.22%), Query Frame = 0


Query: 1   MAHYQNQYSAQSGADQYGNPIRQTDEYGNVISDTAQHVDPLRRTDEFRGTDQYGNPIHRT 60
           MAHYQNQYSA+SG DQYG PIRQTDEYGNVIS++ Q+ D   RTDEFR TDQYGNPI R+
Sbjct: 1   MAHYQNQYSAKSGTDQYGYPIRQTDEYGNVISESGQYADTRHRTDEFRETDQYGNPIRRS 60

Query: 61  DQHGVGDPTGRTGTGTGTGMYEGGGGGQQQQQRGGMFHHDKPVSTGGSVGYTTGEQG-ER 120
           D+                            QQ+GG+FHHDK V+T      T  E+G E 
Sbjct: 61  DE----------------------------QQQGGIFHHDKTVTT------TRAEKGGEH 104

Query: 121 HEKKGMMEKIKEKLPGGN 137
           HEKKG+MEKIKEKLPGG+
Sbjct: 121 HEKKGIMEKIKEKLPGGH 104

[Close]

BLAST of Cp4.1LG14g01780 vs. ExPASy TrEMBL
Match: A0A6J1EUD8 (dehydrin DHN1-like OS=Cucurbita moschata OX=3662 GN=LOC111436004 PE=3 SV=1)

HSP 1 Score: 254 bits (648), Expect = 4.30e-85
Identity = 129/138 (93.48%), Postives = 129/138 (93.48%), Query Frame = 0


Query: 1   MAHYQNQYSAQSGADQYGNPIRQTDEYGNVISDTAQHVDPLRRTDEFRGTDQYGNPIHRT 60
           MAHYQNQYSAQSGADQYGNPIRQTDEYGNVISDTAQH DPLRRTDEFRGTDQYGNPIHRT
Sbjct: 1   MAHYQNQYSAQSGADQYGNPIRQTDEYGNVISDTAQHGDPLRRTDEFRGTDQYGNPIHRT 60

Query: 61  DQHGVGDPTGRTGTGTGTGMYEGGGGGQQQQQRGGMFHHDKPVSTGGSVGYTTGEQGERH 120
           DQHGVGDPTGRT   TGTGMYEG    QQQQQRGGMFHHDKPVSTGGSVGYTT EQGERH
Sbjct: 61  DQHGVGDPTGRT---TGTGMYEGRQ--QQQQQRGGMFHHDKPVSTGGSVGYTTAEQGERH 120

Query: 121 EKKGMMEKIKEKLPGGNQ 138
           EKKGMMEKIKEKLPGGNQ
Sbjct: 121 EKKGMMEKIKEKLPGGNQ 133

[Close]

BLAST of Cp4.1LG14g01780 vs. ExPASy TrEMBL
Match: A0A6J1C526 (dehydrin DHN1-like OS=Momordica charantia OX=3673 GN=LOC111008439 PE=3 SV=1)

HSP 1 Score: 139 bits (349), Expect = 1.03e-39
Identity = 82/138 (59.42%), Postives = 89/138 (64.49%), Query Frame = 0


Query: 1   MAHYQNQYSAQSGADQYGNPIRQTDEYGNVISDTAQHVDPLRRTDEFRGTDQYGNPIHRT 60
           MAHYQN Y  QSG D+YGNPIRQTDEYGNVI ++ Q VDPLRRT E R TD YG      
Sbjct: 1   MAHYQNPYGVQSGTDEYGNPIRQTDEYGNVIPESGQFVDPLRRTGELRDTDPYG------ 60

Query: 61  DQHGVGDPTGRT-GTGTGTGMYEGGGGGQQQQQRGGMFHHDKPVSTGGSVGYTTGEQGER 120
               VGDP GRT GTG  T  + GG  GQ      GMFHHD   +   + GYT  EQG  
Sbjct: 61  ----VGDPAGRTAGTGGQTQQHRGGDQGQ------GMFHHDSQRAA--TTGYTAAEQGGG 120

Query: 121 HEKKGMMEKIKEKLPGGN 137
            EKKGMMEKIKEKLPG +
Sbjct: 121 REKKGMMEKIKEKLPGAH 120

[Close]

BLAST of Cp4.1LG14g01780 vs. ExPASy TrEMBL
Match: A0A5D3CYN8 (Dehydrin DHN1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005140 PE=3 SV=1)

HSP 1 Score: 129 bits (323), Expect = 4.75e-35
Identity = 87/182 (47.80%), Postives = 99/182 (54.40%), Query Frame = 0


Query: 1   MAHYQNQYSAQSGADQYGNPIRQTDEYGNVISDTAQHVDPLRRTDEFRGTDQYGNPIHRT 60
           MAHYQ+      G DQYGNPIRQTDEYGNVIS+T Q+ DPLRRT EFR TDQYGNP+ RT
Sbjct: 1   MAHYQS-----GGTDQYGNPIRQTDEYGNVISETGQYGDPLRRTGEFRETDQYGNPVRRT 60

Query: 61  DQHGVGDPTGRTGTGTGTG-MYE---------GGGGGQQQQQRGGMFHHD---------- 120
           D    G+P G TGTG GTG  YE         GGG  QQ ++ GG+ H            
Sbjct: 61  DDV-FGNPVG-TGTGMGTGGTYETSGYGGAGYGGGHHQQHKEHGGILHRSGSSSSSSSED 120

Query: 121 ---------------------------KPVSTGGSVGYTTGEQGERHEKKGMMEKIKEKL 135
                                      + VST    GY + E G +HEKKG+MEKIKEKL
Sbjct: 121 DGHGGRRKKGLKEKVKEKLPGRHHHEGQAVSTTTPGGYASAEHGGQHEKKGIMEKIKEKL 175

[Close]

BLAST of Cp4.1LG14g01780 vs. ExPASy TrEMBL
Match: A0A1S3BTX2 (dehydrin DHN1 OS=Cucumis melo OX=3656 GN=LOC103493214 PE=3 SV=1)

HSP 1 Score: 129 bits (323), Expect = 4.75e-35
Identity = 87/182 (47.80%), Postives = 99/182 (54.40%), Query Frame = 0


Query: 1   MAHYQNQYSAQSGADQYGNPIRQTDEYGNVISDTAQHVDPLRRTDEFRGTDQYGNPIHRT 60
           MAHYQ+      G DQYGNPIRQTDEYGNVIS+T Q+ DPLRRT EFR TDQYGNP+ RT
Sbjct: 1   MAHYQS-----GGTDQYGNPIRQTDEYGNVISETGQYGDPLRRTGEFRETDQYGNPVRRT 60

Query: 61  DQHGVGDPTGRTGTGTGTG-MYE---------GGGGGQQQQQRGGMFHHD---------- 120
           D    G+P G TGTG GTG  YE         GGG  QQ ++ GG+ H            
Sbjct: 61  DDV-FGNPVG-TGTGMGTGGTYETSGYGGAGYGGGHHQQHKEHGGILHRSGSSSSSSSED 120

Query: 121 ---------------------------KPVSTGGSVGYTTGEQGERHEKKGMMEKIKEKL 135
                                      + VST    GY + E G +HEKKG+MEKIKEKL
Sbjct: 121 DGHGGRRKKGLKEKVKEKLPGRHHHEGQAVSTTTPGGYASAEHGGQHEKKGIMEKIKEKL 175

[Close]

BLAST of Cp4.1LG14g01780 vs. ExPASy TrEMBL
Match: A0A6J1C5G3 (dehydrin Xero 1-like OS=Momordica charantia OX=3673 GN=LOC111008435 PE=3 SV=1)

HSP 1 Score: 129 bits (323), Expect = 5.47e-35
Identity = 80/140 (57.14%), Postives = 90/140 (64.29%), Query Frame = 0


Query: 1   MAHYQNQYSAQSGADQYGNPIRQTDEYGNVISDTA--QHVDPLRRTDEFRGTDQYGNPIH 60
           MAHYQNQY AQSG DQYGNPIR+TDEYGNVISDT   Q+ DPL RTDEFR TDQYGNP+ 
Sbjct: 1   MAHYQNQYGAQSGTDQYGNPIRRTDEYGNVISDTGVGQYGDPLHRTDEFRQTDQYGNPVR 60

Query: 61  RTDQHGVGDPTGRTGTGTGTGMYEG---GGGGQQQQQRGGMFHHDKPVSTGGSVGYTTGE 120
           RTD+ G  +P G  G     G Y G   GGG  Q ++  G+       S+  S     G 
Sbjct: 61  RTDEFG--NPIGTGGATYEAGGYGGTGYGGGHHQHKEHQGVLRRSGSSSSSSSE--DDGH 120

Query: 121 QGERHEKKGMMEKIKEKLPG 135
            G R  KKG+ EKIKEKLPG
Sbjct: 121 GGRR--KKGLKEKIKEKLPG 134

[Close]

BLAST of Cp4.1LG14g01780 vs. TAIR 10
Match: AT5G66400.2 (Dehydrin family protein )

HSP 1 Score: 52.8 bits (125), Expect = 2.6e-07
Identity = 65/189 (34.39%), Postives = 76/189 (40.21%), Query Frame = 0


Query: 1   MAHYQNQYSAQSGADQYGNPIRQT-DEYGNVISDTAQHVDPLRRTDEFRGTDQYGNPIHR 60
           MA YQN+   Q+  D+YGNPI+Q  DEYGN +                 G   YG     
Sbjct: 1   MASYQNRPGGQA-TDEYGNPIQQQYDEYGNPMGGGGYGTG---GGGGATGGQGYGTGGQG 60

Query: 61  TDQHGVGDPTGRTGTGTGTGM--YEGGGG----GQQQQQR------GGMF---------- 120
               G G  TG  G GTGTG   +  GGG    GQ+Q  +      GGM           
Sbjct: 61  YGSGGQGYGTGGQGYGTGTGTEGFGTGGGARHHGQEQLHKESGGGLGGMLHRSGSGSSSS 120

Query: 121 -----------------------HHDK----PVSTGGSVGYTTGEQ-GERHEKKGMMEKI 139
                                  HHD+        G   GY  G   GE HEKKGMM+KI
Sbjct: 121 SDDGQGGRRKKGITQKIKEKLPGHHDQSGQAQAMGGMGSGYDAGGYGGEHHEKKGMMDKI 180

[Close]

BLAST of Cp4.1LG14g01780 vs. TAIR 10
Match: AT5G66400.1 (Dehydrin family protein )

HSP 1 Score: 52.4 bits (124), Expect = 3.4e-07
Identity = 65/190 (34.21%), Postives = 76/190 (40.00%), Query Frame = 0


Query: 1   MAHYQNQYSAQSGADQYGNPIRQT-DEYGNVISDTAQHVDPLRRTDEFRGTDQYGNPIHR 60
           MA YQN+   Q+  D+YGNPI+Q  DEYGN +                 G   YG     
Sbjct: 1   MASYQNRPGGQA-TDEYGNPIQQQYDEYGNPMGGGGYGTG---GGGGATGGQGYGTGGQG 60

Query: 61  TDQHGVGDPTGRTGTGTGTGM--YEGGGG----GQQQQQR------GGMF---------- 120
               G G  TG  G GTGTG   +  GGG    GQ+Q  +      GGM           
Sbjct: 61  YGSGGQGYGTGGQGYGTGTGTEGFGTGGGARHHGQEQLHKESGGGLGGMLHRSGSGSSSS 120

Query: 121 ------------------------HHDK----PVSTGGSVGYTTGEQ-GERHEKKGMMEK 139
                                   HHD+        G   GY  G   GE HEKKGMM+K
Sbjct: 121 SEDDGQGGRRKKGITQKIKEKLPGHHDQSGQAQAMGGMGSGYDAGGYGGEHHEKKGMMDK 180

The following BLAST results are available for this feature:

BLAST of Cp4.1LG14g01780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P28641	2.1e-09	35.71	Dehydrin DHN3 OS=Pisum sativum OX=3888 GN=DHN3 PE=2 SV=1	[more]
P28640	2.7e-09	39.86	Dehydrin DHN2 OS=Pisum sativum OX=3888 GN=DHN2 PE=2 SV=1	[more]
A8CVF3	6.1e-09	41.33	Dehydrin DHN1 OS=Avicennia marina OX=82927 GN=DHN1 PE=1 SV=1	[more]
P28639	6.1e-09	38.89	Dehydrin DHN1 OS=Pisum sativum OX=3888 GN=DHN1 PE=2 SV=1	[more]
P30185	4.8e-06	34.21	Dehydrin Rab18 OS=Arabidopsis thaliana OX=3702 GN=RAB18 PE=2 SV=1	[more]

BLAST of Cp4.1LG14g01780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023553197.1	1.89e-96	100.00	dehydrin DHN3-like [Cucurbita pepo subsp. pepo]	[more]
KAG6577230.1	3.00e-85	93.48	hypothetical protein SDJN03_24804, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022929430.1	8.89e-85	93.48	dehydrin DHN1-like [Cucurbita moschata]	[more]
KAG7015320.1	1.68e-84	92.75	hypothetical protein SDJN02_22955, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_038888416.1	2.26e-40	56.52	dehydrin Xero 1-like [Benincasa hispida]	[more]

BLAST of Cp4.1LG14g01780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EUD8	4.30e-85	93.48	dehydrin DHN1-like OS=Cucurbita moschata OX=3662 GN=LOC111436004 PE=3 SV=1	[more]
A0A6J1C526	1.03e-39	59.42	dehydrin DHN1-like OS=Momordica charantia OX=3673 GN=LOC111008439 PE=3 SV=1	[more]
A0A5D3CYN8	4.75e-35	47.80	Dehydrin DHN1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005140 ...	[more]
A0A1S3BTX2	4.75e-35	47.80	dehydrin DHN1 OS=Cucumis melo OX=3656 GN=LOC103493214 PE=3 SV=1	[more]
A0A6J1C5G3	5.47e-35	57.14	dehydrin Xero 1-like OS=Momordica charantia OX=3673 GN=LOC111008435 PE=3 SV=1	[more]

BLAST of Cp4.1LG14g01780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66400.2	2.6e-07	34.39	Dehydrin family protein	[more]
AT5G66400.1	3.4e-07	34.21	Dehydrin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000167	Dehydrin	PFAM	PF00257	Dehydrin	coord: 104..136 e-value: 3.1E-8 score: 34.3
IPR000167	Dehydrin	PANTHER	PTHR33346	DEHYDRIN XERO 2-RELATED	coord: 43..137
IPR000167	Dehydrin	PANTHER	PTHR33346	DEHYDRIN XERO 2-RELATED	coord: 1..36
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..138
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..130
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	PANTHER	PTHR33346:SF29	DEHYDRIN RAB18	coord: 1..36
None	No IPR available	PANTHER	PTHR33346:SF29	DEHYDRIN RAB18	coord: 43..137
IPR030513	Dehydrin, conserved site	PROSITE	PS00823	DEHYDRIN_2	coord: 128..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG14g01780.1	Cp4.1LG14g01780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009415	response to water
cellular_component	GO:0005829	cytosol