Cp4.1LG13g10300 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG13g10300
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	SHUGOSHIN 2-like isoform X1
Location	Cp4.1LG13: 6993465 .. 6997859 (+)
RNA-Seq Expression	Cp4.1LG13g10300
Synteny	Cp4.1LG13g10300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACAGGTTCGAACTTGCTTCGGACAGCCGTTGTGCTCCCGGTACCATTTTACAATTTTACCCTCATCTTATATCAATTTCGCGCTTAATCCTGCTCGGAATTCATTTCTCTTTTCAGTAACTCTGTCCTTTCCAAGATCCGTTGTTCGAGCAGAAAGATTTTAGGATTCAACCATAGAGTCTCCAACATGGAGTGTAGCATTTCGCTCGATTCGAAGAACTACGGTGTTGGAGGTACTTTTTGTTTTGATTTCTTCCATTAGGACTAACTTCTTGATCTGTTCCCTCTATTGCTTTCGAATTTTGCAGATTCCTTACTGTTAGTTTTCCTGAAAATCATTCGATTTCGATGAATTGAGGTTGCTTAATTGGAATCCTAATTGCATTTCGTGGTTTATATGGTTTAACAAGGATTCTAGGTTTTGAATGCACACCATTTACTCCCGTTGTTTTTACGATTTTTAGGGTTTTTCATCTGCATGCGTTTTTGTAGATTTTTTGGAGAATAATTGAATTTGGATGAACTACCTCGTGCTGTTCTTAGTAAATTGAAGCTAGTCATTCACTAGTTTAGTATGCATTGAAAGGGTTTGTTGATATTTAGCTAGTCAAAACATGGAAATAGCTGGAGTGAAAACGATGAAGAGCTCCAAAGTAGGAGGCGCCCAGAGGAAACGGCTTTCCGATATAAGCAACTTGAAGGAGCAACCTGTACTGCAGAAGGGAGATACGAAGCAGCAGTCTAGTTTGCTTAAGACCTATGAATATGTTGATAAGTTACAGAAGGTACTTCTGATGTGTTCTATAAGCTGCCCAGTTTGATTGGCTCATCTTATTGATGATGCCTTTATTTTTCTTTCCAGGAAAATATGGCACTTACGAAAGTTCTTGCAGAAAGAAAGTATCCTTTGTGACGGTCATAATCCATAACAGAAATAGTCTTTGTTTTTCTGTTCGGGCTTTATATATACATACGTACGTACGTACGTACATATATAATCGATGAACTTTCTTTTTCCTTGATGAGTATTTTCGAATAGTCGTATAATTGAGATAAGTGGAAATGAGTTAGAGACATTGAGAACCAATTTTCAGAAATTGCAGCAGCAGAATCTGCAATTCGCCCAAGCAAACAGTCAAATGTTAGCGGTAATCTTGCACCTGCATCTTTGTGTCTTTAGTTTCCATTTTATCACTTGTTCATGGCAAGCTAGTATCCTAGAAAATAAATTTTAATAATCTTCTACACTTAACGTCGTGGTTCTTTCTATTTTTAGGAACTTAATTCAGGTAAAGAAAGGGTGAGTGAAATTTCTATCATCTGAAATTCGATTTAGTTTGCAGATCGAACTCTTTAATTTGCTGCAACTGAATGTAATTTTATGTTCTGCAGCTGAAAGCCCTTCAACACGAGCTTGGATGTAAAAATGGCATTCTTAGGTCAAGAAAACTGGATTTGGAGGTTACTTTAATTTTTATTAGTCATTTCAAATTTGCAATTAAGTGCTTATTGATTATTGACACCGAAACTCTTCTTCCAGAGAAAAGGAAAAGCAGCGACATTTCAGCCTGGAGGGGTACATAAACAATACTGTTGTTATTCTTTAGTAAATATTTCTTATGCTACTTACCCTTTTCTTTTCTCTACCTCAAGGTAGGGACCGCCGGATGTAGTGAGGCAGCGGAATCTATGAATACAAATGAGGGTAATATGCCTTGCAAAACTAACAGGCGACGACAATCCAGACAAGAATGTAAGTGCCAGTGCACAAATTACCTTCAGCTTCAGGATATGAATATTGTCATTTTCTATAACCAATTCTCTTCTGAATGCAGCTTTTGGCACTTCAGTTCTTAAGACAGAGGTTCAGAAGGTTGAAAGCAAAAGGTCTGTTCATGGATATGTAATTGCTATATTTGGACTTATCTGATTATATTGCATACCAAAGATAAATCGAGTATGATCTTGATTGAATTTCTAACAGGCCTAGAAGGCAATCTGCAAGATTCAAAACCGAGGAACCAGTGGCTGCAAACCACATCTTGGAGACAGATAATTCCAATTCTAATGATGCTTTGCAATGTAAAGAGACTTCAGTTCATCGAGCAGAGGTTCAAAAGGTCGAAGGCAAGAGGTCAGTTCATGGATATTCAATTGCTTTATTTGGGTTTTATGTTTTCAGGATATGTTCAAAATGATGTAGCATAAATAATACATATTGTTGAACATGAGCTTCATTGAATTTTCAATAGGCCTTGTTCGAGAAAGCAGTCTGCAAGATTGAAAATTGAGGAACCGGTTGCTACAAATGACTTATTAGGGATAGAAAATTTCAATTCTACCGATGCTTCTCAATGTAGAGAAACTTCAGTTCTTCAAACAGAGGTCCAGAAGGTTGAAGGCATAAGGTCTGTTCGTGGATATTTAATTGCCTTATTTGGCTTCACATTTTCAGAAAATTTTCCAGATAATATAGCATACAAGAGATGTTGAACATGAACTTCATTGAATTTCTTAGCAGGCCTTGTCTGAGAAGGCAGTCTGCAAGATTCAAACTCGAGGAACCAGTGGCTATCAAAGACTCACTTGATACTGTAAATTCCAATTCTACCAGTGCTTCTCTATGCAAAGAGATCGTATGTGAAGTAAAAATTGTTCCAACTTCATCAGTAGAAACAGAAGATAATGGCAATTCTACTGATAGATCTGAAGTTCAAGAACGTCGGAGGACATCCGTTGGTAGGCCGTTAAGGCGAGCCGCTGAAAAAATTCAGTCCTACAAGGAAATTCCACTTAACGTCAAGATGCGCAGACCGGTATGATCAATCCTAACCCAAATTTCCTTTTCCTGTTGTCAAGTGAGGGGAGAGTTGTGATCACTAGTTTTGTATCTGTATCCTTTGATAGCATTAGATTGTGCACTTACTGTAAAAAGCTCGAGTTTGCTTCGACATTAAGACTAGACGATGAAATCAACCATTCACAACACCTTTTAGGCTAAAATGACCAATTAGTTAGGACTGTAAAAAAGCTTCCTTGAAACAACACTATTGTTTTGTCTTGGCAAATTAAACTGATGCATCTAGTCGGATGTAGCACAATTGTTTATACTTCAAGTCTAGCTCTTTGCCTATCTGATGCTTGAATTAGTCCAAGGCTCTGTTTTATCACACTTATGCTGGCTTTTGCACATCAAGCCAATCTTCATTCTTGTCCTTCCTTTCCTTTTCTCTGTTTGACTGTCTCCCTGCATAGCTTTAGTTCTTATCTGAATAGCTTTAGTTCTTATCTGATATGAACGTCCAGTAGCTCAATTGTGAGATCCCACCTCAATTGGAATGGGGAATGAGTGCCAGCGAGGACGCTGGGCTCCGAAGGGAGCGGATTGTGAGATCCCATATTGGTTGAAGTGGAAAACGAAGTATTCTTTACAAGGTTGTGGAAACCTCTCCCTAGAGATGCATTTTAAAACCTTGAGGGGAAGCCCGGAAAGGAAAAATCCAAAGAGTACAATATCTGCTAGCGGTGGACTTGGACGGTTACAACATCTCTAAACTCTAAATTGATCAAACTGCACTTAGATATTATCTCTGACATGCATATTCTTTTGACAAAATGATGGGTCCTAGCTTGTTAAACCTTCAATGGGTAGACAAAAGAAAAGGGGTACCAAGAGAATGTACTAATTTTTCCTCTTTTCATGTTTCATATTAGATTTCTTCCTAGCTAGCTACCTCCGTACGTTCGTTTCGATCCTTTTCCTTCTTTGACCTTTCTTTGGAGCTCTAATCATCCAAAGTCGGAATCAGTAGTAGCTCCAAATGACCAATCTACTGTTATCATATAAGGTAAGCATTGGACCAATCTACTGTTATCATATAAGGTAAGCATTGTTCTTTCAGACATAGTCGAGTGTTGGAAAATTACGAGGAGAGAAAGAACACGTGGTGGTGTGTGGACCCCTAAAGAATTCACCTGCTCTCACATGCTAAAGAAAAAGGTGGATTTTATGTTTCATCCTTTTCTCCTTCAAATCCTCCTCCAAGTGTAAAAGAAAGAAAAAAAGCTCAATGTAAAACTGTTGTTCTTCATCGCTGATAGATCGTAAAACTGGTCGAACCTTACGTTTAGACAAAGAAAAAAGTTCGGTTCCTCTCCCTATCAGTCTCATTACTTCGCTCCTCACATTTGCACCTACTCACTCATCAATCACGGTGTTCAGCTGACTTACACTAAAGAGAGAAGTTTCTAATTGTCCGCCAAATTTCCTAGAAGCCGTAAGAAATTTCGTTTTTTTGCCTCTCTCAGATCCTTCCTTTTTCCTTCCATTTTTTGTTAATTGTTTAAATATCATTTCATCTAAGCTTTATCTTCACTAACTTTAGCATTTATTA

mRNA sequence

AAACAGGTTCGAACTTGCTTCGGACAGCCGTTGTGCTCCCGTAACTCTGTCCTTTCCAAGATCCGTTGTTCGAGCAGAAAGATTTTAGGATTCAACCATAGAGTCTCCAACATGGAGTGTAGCATTTCGCTCGATTCGAAGAACTACGGTGTTGGAGCTAGTCAAAACATGGAAATAGCTGGAGTGAAAACGATGAAGAGCTCCAAAGTAGGAGGCGCCCAGAGGAAACGGCTTTCCGATATAAGCAACTTGAAGGAGCAACCTGTACTGCAGAAGGGAGATACGAAGCAGCAGTCTAGTTTGCTTAAGACCTATGAATATGTTGATAAGTTACAGAAGGAACTTAATTCAGGTAAAGAAAGGCTGAAAGCCCTTCAACACGAGCTTGGATGTAAAAATGGCATTCTTAGGTCAAGAAAACTGGATTTGGAGAGAAAAGGAAAAGCAGCGACATTTCAGCCTGGAGGGGTAGGGACCGCCGGATGTAGTGAGGCAGCGGAATCTATGAATACAAATGAGGGTAATATGCCTTGCAAAACTAACAGGCGACGACAATCCAGACAAGAATCTTTTGGCACTTCAGTTCTTAAGACAGAGGTTCAGAAGGTTGAAAGCAAAAGGCCTAGAAGGCAATCTGCAAGATTCAAAACCGAGGAACCAGTGGCTGCAAACCACATCTTGGAGACAGATAATTCCAATTCTAATGATGCTTTGCAATGTAAAGAGACTTCAGTTCATCGAGCAGAGGTTCAAAAGGTCGAAGGCAAGAGGCCTTGTTCGAGAAAGCAGTCTGCAAGATTGAAAATTGAGGAACCGGTTGCTACAAATGACTTATTAGGGATAGAAAATTTCAATTCTACCGATGCTTCTCAATGTAGAGAAACTTCAGTTCTTCAAACAGAGGTCCAGAAGGTTGAAGGCATAAGGCCTTGTCTGAGAAGGCAGTCTGCAAGATTCAAACTCGAGGAACCAGTGGCTATCAAAGACTCACTTGATACTGTAAATTCCAATTCTACCAGTGCTTCTCTATGCAAAGAGATCGTATGTGAAGTAAAAATTGTTCCAACTTCATCAGTAGAAACAGAAGATAATGGCAATTCTACTGATAGATCTGAAGTTCAAGAACGTCGGAGGACATCCGTTGGTAGGCCGTTAAGGCGAGCCGCTGAAAAAATTCAGTCCTACAAGGAAATTCCACTTAACGTCAAGATGCGCAGACCGGTATGATCAATCCTAACCCAAATTTCCTTTTCCTGTTGTCAAGTGAGGGGAGAGTTGTGATCACTAGTTTTGTATCTGTATCCTTTGATAGCATTAGATTGTGCACTTACTGTAAAAAGCTCGAGTTTGCTTCGACATTAAGACTAGACGATGAAATCAACCATTCACAACACCTTTTAGGCTAAAATGACCAATTAGTTAGGACTGTAAAAAAGCTTCCTTGAAACAACACTATTGTTTTGTCTTGGCAAATTAAACTGATGCATCTAGTCGGATGTAGCACAATTGTTTATACTTCAAGTCTAGCTCTTTGCCTATCTGATGCTTGAATTAGTCCAAGGCTCTGTTTTATCACACTTATGCTGGCTTTTGCACATCAAGCCAATCTTCATTCTTGTCCTTCCTTTCCTTTTCTCTGTTTGACTGTCTCCCTGCATAGCTTTAGTTCTTATCTGAATAGCTTTAGTTCTTATCTGATATGAACGTCCAGTAGCTCAATTGTGAGATCCCACCTCAATTGGAATGGGGAATGAGTGCCAGCGAGGACGCTGGGCTCCGAAGGGAGCGGATTGTGAGATCCCATATTGGTTGAAGTGGAAAACGAAGTATTCTTTACAAGGTTGTGGAAACCTCTCCCTAGAGATGCATTTTAAAACCTTGAGGGGAAGCCCGGAAAGGAAAAATCCAAAGAGTACAATATCTGCTAGCGGTGGACTTGGACGGTTACAACATCTCTAAACTCTAAATTGATCAAACTGCACTTAGATATTATCTCTGACATGCATATTCTTTTGACAAAATGATGGGTCCTAGCTTGTTAAACCTTCAATGGGTAGACAAAAGAAAAGGGGTACCAAGAGAATGTACTAATTTTTCCTCTTTTCATGTTTCATATTAGATTTCTTCCTAGCTAGCTACCTCCGTACGTTCGTTTCGATCCTTTTCCTTCTTTGACCTTTCTTTGGAGCTCTAATCATCCAAAGTCGGAATCAGTAGTAGCTCCAAATGACCAATCTACTGTTATCATATAAGGTAAGCATTGGACCAATCTACTGTTATCATATAAGGTAAGCATTGTTCTTTCAGACATAGTCGAGTGTTGGAAAATTACGAGGAGAGAAAGAACACGTGGTGGTGTGTGGACCCCTAAAGAATTCACCTGCTCTCACATGCTAAAGAAAAAGGTGGATTTTATGTTTCATCCTTTTCTCCTTCAAATCCTCCTCCAAGTGTAAAAGAAAGAAAAAAAGCTCAATGTAAAACTGTTGTTCTTCATCGCTGATAGATCGTAAAACTGGTCGAACCTTACGTTTAGACAAAGAAAAAAGTTCGGTTCCTCTCCCTATCAGTCTCATTACTTCGCTCCTCACATTTGCACCTACTCACTCATCAATCACGGTGTTCAGCTGACTTACACTAAAGAGAGAAGTTTCTAATTGTCCGCCAAATTTCCTAGAAGCCGTAAGAAATTTCGTTTTTTTGCCTCTCTCAGATCCTTCCTTTTTCCTTCCATTTTTTGTTAATTGTTTAAATATCATTTCATCTAAGCTTTATCTTCACTAACTTTAGCATTTATTA

Coding sequence (CDS)

ATGGAGTGTAGCATTTCGCTCGATTCGAAGAACTACGGTGTTGGAGCTAGTCAAAACATGGAAATAGCTGGAGTGAAAACGATGAAGAGCTCCAAAGTAGGAGGCGCCCAGAGGAAACGGCTTTCCGATATAAGCAACTTGAAGGAGCAACCTGTACTGCAGAAGGGAGATACGAAGCAGCAGTCTAGTTTGCTTAAGACCTATGAATATGTTGATAAGTTACAGAAGGAACTTAATTCAGGTAAAGAAAGGCTGAAAGCCCTTCAACACGAGCTTGGATGTAAAAATGGCATTCTTAGGTCAAGAAAACTGGATTTGGAGAGAAAAGGAAAAGCAGCGACATTTCAGCCTGGAGGGGTAGGGACCGCCGGATGTAGTGAGGCAGCGGAATCTATGAATACAAATGAGGGTAATATGCCTTGCAAAACTAACAGGCGACGACAATCCAGACAAGAATCTTTTGGCACTTCAGTTCTTAAGACAGAGGTTCAGAAGGTTGAAAGCAAAAGGCCTAGAAGGCAATCTGCAAGATTCAAAACCGAGGAACCAGTGGCTGCAAACCACATCTTGGAGACAGATAATTCCAATTCTAATGATGCTTTGCAATGTAAAGAGACTTCAGTTCATCGAGCAGAGGTTCAAAAGGTCGAAGGCAAGAGGCCTTGTTCGAGAAAGCAGTCTGCAAGATTGAAAATTGAGGAACCGGTTGCTACAAATGACTTATTAGGGATAGAAAATTTCAATTCTACCGATGCTTCTCAATGTAGAGAAACTTCAGTTCTTCAAACAGAGGTCCAGAAGGTTGAAGGCATAAGGCCTTGTCTGAGAAGGCAGTCTGCAAGATTCAAACTCGAGGAACCAGTGGCTATCAAAGACTCACTTGATACTGTAAATTCCAATTCTACCAGTGCTTCTCTATGCAAAGAGATCGTATGTGAAGTAAAAATTGTTCCAACTTCATCAGTAGAAACAGAAGATAATGGCAATTCTACTGATAGATCTGAAGTTCAAGAACGTCGGAGGACATCCGTTGGTAGGCCGTTAAGGCGAGCCGCTGAAAAAATTCAGTCCTACAAGGAAATTCCACTTAACGTCAAGATGCGCAGACCGGTATGA

Protein sequence

MECSISLDSKNYGVGASQNMEIAGVKTMKSSKVGGAQRKRLSDISNLKEQPVLQKGDTKQQSSLLKTYEYVDKLQKELNSGKERLKALQHELGCKNGILRSRKLDLERKGKAATFQPGGVGTAGCSEAAESMNTNEGNMPCKTNRRRQSRQESFGTSVLKTEVQKVESKRPRRQSARFKTEEPVAANHILETDNSNSNDALQCKETSVHRAEVQKVEGKRPCSRKQSARLKIEEPVATNDLLGIENFNSTDASQCRETSVLQTEVQKVEGIRPCLRRQSARFKLEEPVAIKDSLDTVNSNSTSASLCKEIVCEVKIVPTSSVETEDNGNSTDRSEVQERRRTSVGRPLRRAAEKIQSYKEIPLNVKMRRPV

Homology

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BLAST of Cp4.1LG13g10300 vs. ExPASy Swiss-Prot
Match: Q0WTB8 (SHUGOSHIN 2 OS=Arabidopsis thaliana OX=3702 GN=SGO2 PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 6.0e-11
Identity = 106/412 (25.73%), Postives = 174/412 (42.23%), Query Frame = 0


Query: 36  AQRKRLSDISNLKEQPVLQKGDTKQQSSLLKTYEYVDKLQKELNSGKERLKALQHELGCK 95
           A R +L ++S ++ Q  L+      Q   L+  +   ++  ELN+ ++RLK LQHELGCK
Sbjct: 59  AHRNKLVELSGIEIQK-LRINLRSVQEKNLQLAQANSQMLAELNTNRDRLKDLQHELGCK 118

Query: 96  NGILRSRKLDLERKGKAATFQPGGVGTAGCSEAAESMNTNEGNMPCK-TNRRRQSR-QES 155
           N +L+ +K  LE +    T        +  +   +  +    ++  K T R+R +R + S
Sbjct: 119 NALLKVKK-HLEEQVLPRTHHESKDKVSASASDGDCKSFQVHDIKHKDTKRKRTTRIKSS 178

Query: 156 FGTSVLKTEVQKVESK--RPRRQSARF----------KTEEPVAANHILETDNSNSNDAL 215
               V    V    SK  R RR S             +TE+ +    +    N + ++ +
Sbjct: 179 VSADVKPIPVNDSNSKANRKRRVSGVIDTTGIPEEICQTEDDIDKGVVSRGVNQDIDNVV 238

Query: 216 QCKETSVHRAEV-QKVEGKRPCSRKQSARLKIEEPVATNDLLGI----ENFNSTDASQCR 275
             K        V + V  KR C+R+QS R  ++E   T  LL +    E+  +   S  R
Sbjct: 239 NKKFVPDAANPVKESVHRKRQCTRRQSTRFDVQETKQTEKLLEMDGAKESKETASFSLRR 298

Query: 276 ETSVLQTE-------VQKVEGIRPCLRRQ------SARFKLEEP-------------VAI 335
            ++ L+ E       + + + +R  ++R+      SARF ++EP             + I
Sbjct: 299 RSARLRHEEAEPCKSLHEGDEVRETIKRRRVSLRLSARFDIQEPHVTETSNADDARSIVI 358

Query: 336 KDSL-----------------------------DTVNSNSTSASLCKEIVCEVKIVPTSS 370
           ++S                               +    S +    KEI  +  +V T  
Sbjct: 359 EESAGSRSESVEPSESRHETKEITRKRSFSTRRQSTKGKSQTDEAIKEIATDPSLVNTIV 418

[Close]

BLAST of Cp4.1LG13g10300 vs. ExPASy Swiss-Prot
Match: E3VXF2 (Shugoshin-1 OS=Oryza sativa subsp. japonica OX=39947 GN=SGO1 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 1.3e-05
Identity = 104/428 (24.30%), Postives = 165/428 (38.55%), Query Frame = 0


Query: 36  AQRKRLSDISNLKEQPVLQKGDTKQQSSLLKTYEYVDKLQKELNSGKERLKALQHELGCK 95
           A+R ++ ++S ++ Q +       QQ + L+  +   ++  E+N GK+R+K LQHEL C 
Sbjct: 65  AERNKVIEVSRVELQKIRLALQAMQQKN-LQLVQANSQMFAEINQGKDRIKLLQHELACT 124

Query: 96  NGILRSRKLDLERKGKAATFQ-----------------PGGVGTAGCSEAAESMNTNEGN 155
             +L+ +  +LE+  K +  Q                 P            E +   +  
Sbjct: 125 IAVLKVKGSELEKMSKTSNNQQNRAKILEKKTRSSKCAPTKAHQMAAGSIREHLVEIQSA 184

Query: 156 MPC----------KTNRRRQSRQESFGTSVLKTEVQKVESKRP----------------- 215
           +P           KTN+R  +R++S    V         S RP                 
Sbjct: 185 VPSYTSCHEPPQDKTNKRCTNRRKSESCEVTMDTNTVQHSCRPHVEYNGSSHDDDPRKTR 244

Query: 216 RRQSARF-----------------------------KTEEPVAANHILETDNSNS-NDAL 275
           RR+SAR                              K +EP A   ++      S    L
Sbjct: 245 RRRSARLNPGSFEVAEICDKLHEDATVPSAPSSNVPKLQEPNAGKDMICGGKMKSLQKEL 304

Query: 276 QCKETS--VHRAEVQKV-EGKRPCSRKQSARLKIEEPVATNDLLGI-------ENFNSTD 335
            C   +  V   E++++ E     +  ++ +  IE+P      + I       E+F S  
Sbjct: 305 PCDAIAQVVEAPELKEIQEAGSSVAGGEAHKFDIEDPEPPRKSMRIDANKRKLESFESRL 364

Query: 336 ASQ--------CRETSVLQTEVQKVEGIRPCLRRQSARFKLEEPVAIKDSLDTVNSNSTS 371
           AS         C  TS +  + ++    R   RR+S+R           + + V  ++ +
Sbjct: 365 ASNKEDCINAICDSTSSVPIQHEQK---RKLSRRKSSRLDPGPWEVTNGTFEIVQEDTVA 424

[Close]

BLAST of Cp4.1LG13g10300 vs. ExPASy Swiss-Prot
Match: F4J3S1 (SHUGOSHIN 1 OS=Arabidopsis thaliana OX=3702 GN=SGO1 PE=3 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.7e-05
Identity = 134/578 (23.18%), Postives = 199/578 (34.43%), Query Frame = 0


Query: 11  NYGVGASQNM---EIAGVKTMKSSKVGGAQRKRLSDISNLKEQPVLQKGDTK--QQSSLL 70
           N G  AS+ +   +  G K +    +  AQR++L DI+NL+ Q  L     K  QQ+ L+
Sbjct: 8   NVGDHASEGVRTNKAKGEKMVLEPPMNSAQRRKLGDITNLQNQKNLMNQGAKHQQQAILI 67

Query: 71  KTYEYVDKLQK---------------------------------------------ELNS 130
            + E  + LQK                                             E N+
Sbjct: 68  SSKENAENLQKENTKLMKVVMERDGIKSDLKKLRIEFQKVQEQNLLLAQANTRILAEFNT 127

Query: 131 GKERLKALQHELGCKNGILRSRKLDLERK-------------------GKAATFQPGGVG 190
            K++LK LQHELGCKNG++ +RK+ L+ +                   G   TFQP    
Sbjct: 128 SKDQLKVLQHELGCKNGLVMARKMLLKEQTLPCTRHASKVKAQANACGGACKTFQPNDAD 187

Query: 191 TAGCSEAAESMNTNEGNMPCKTNRRRQSRQESFGTSVL---------------------- 250
               S  + + N+ + N    + RR   R+    + VL                      
Sbjct: 188 HEHAS-GSSNANSLQRNEKANSKRRVSGRKNPANSEVLDIIGRSGETCQMEDNIDNKKLV 247

Query: 251 -----------------------------------KTE-VQKV----------------- 310
                                              +TE +QKV                 
Sbjct: 248 SDSDNDAENHINDNVQSKRYCAGRQSSSSKTREASQTETLQKVVDAKEIKGDARFSLTKH 307

Query: 311 ----------------ESKRP-RRQSARFKTEEPVAANHILETDNSNSNDALQCKETSVH 369
                           ES+ P RR+SAR K++EP  +    ++  +        +    +
Sbjct: 308 SDWLKSQEPEPSESLYESRFPLRRRSARLKSQEPEPSESFHDSIETTKRRRSAIRSAMFN 367

[Close]

BLAST of Cp4.1LG13g10300 vs. ExPASy Swiss-Prot
Match: Q4QSC8 (Shugoshin-1 OS=Zea mays OX=4577 GN=SGO1 PE=2 SV=2)

HSP 1 Score: 46.6 bits (109), Expect = 7.1e-04
Identity = 94/402 (23.38%), Postives = 165/402 (41.04%), Query Frame = 0


Query: 37  QRKRLSDISNLKEQPVLQKGDTKQQSSLLKTYEYVDKLQKELNSGKERLKALQHELGCKN 96
           ++ ++ D+S ++   +       +Q +L  T +   ++  E+N+GK+R+K LQHEL C  
Sbjct: 75  EKTKIIDLSRVEIYKLRLALQASKQQNLHLT-QTNSQMLAEINTGKDRIKMLQHELSCTT 134

Query: 97  GILRSRKLDLERKGKAATFQPGGVG----------------------TAGC------SEA 156
            +L+ +  +L+RK  A   Q  GV                       T+G       S++
Sbjct: 135 ALLKVKDSELDRKKNAGNVQQKGVKSQVLKTKASTVAVEAHHVGDSVTSGVEHHVVESQS 194

Query: 157 AESMNT------NEGNMPCKTNRRRQSRQES--------------------FGTSVLKTE 216
           A S NT       +G       RRR SR                          S L  E
Sbjct: 195 AVSSNTVCQEPPQDGKQKRMPQRRRSSRLNQGSCEIRGVSQNTLHENPVVPVAPSTLSLE 254

Query: 217 VQKVESKRPRRQSARFK----TEEPVAANHILETDNS---NSNDALQCKETSVHRAEVQK 276
            Q  ++     +S + +      E + A+   +T+ +      D  +  E      EVQ 
Sbjct: 255 KQYGQTTGKHMKSLQNECSATVHEVIMASEFEKTEINELPQKTDLKEIPEACSSETEVQS 314

Query: 277 VE-GKRPCSRKQSARLKIEEPVATNDLLGIENFNSTDASQC-RETSVLQTEVQKVEGI-R 336
            + G +  + KQ+     +  ++ N +   E        +C ++ S ++    K++ I  
Sbjct: 315 HKIGDKAFNSKQNHLTGSQSSLSFNTVDTPEPPEDNTVKRCSKKRSSIEDVNAKLDTITS 374

Query: 337 PCLRRQSARFKLEEPVAIKDSLDTVNSNSTSASLCKEIVCEVKIVPTSSVETEDNGNSTD 371
             LR +  R    +  A  +S+ + +++    +  K+++  +    TS+V  E   N   
Sbjct: 375 EPLRHEEKRKSRRKISARLNSVSSEHTDIVVETEHKDVIVSL-AGSTSNVSMEQRTNQEQ 434

[Close]

BLAST of Cp4.1LG13g10300 vs. NCBI nr
Match: XP_023550313.1 (SHUGOSHIN 2-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 676 bits (1744), Expect = 3.13e-243
Identity = 371/420 (88.33%), Postives = 371/420 (88.33%), Query Frame = 0


Query: 1   MECSISLDSKNYGVGASQNMEIAGVKTMKSSKVGGAQRKRLSDISNLKEQPVLQKGDTKQ 60
           MECSISLDSKNYGVGASQNMEIAGVKTMKSSKVGGAQRKRLSDISNLKEQPVLQKGDTKQ
Sbjct: 1   MECSISLDSKNYGVGASQNMEIAGVKTMKSSKVGGAQRKRLSDISNLKEQPVLQKGDTKQ 60

Query: 61  QSSLLKTYEYVDKLQKE------------------------------------------- 120
           QSSLLKTYEYVDKLQKE                                           
Sbjct: 61  QSSLLKTYEYVDKLQKENMALTKVLAERNRIIEISGNELETLRTNFQKLQQQNLQFAQAN 120

Query: 121 ------LNSGKERLKALQHELGCKNGILRSRKLDLERKGKAATFQPGGVGTAGCSEAAES 180
                 LNSGKERLKALQHELGCKNGILRSRKLDLERKGKAATFQPGGVGTAGCSEAAES
Sbjct: 121 SQMLAELNSGKERLKALQHELGCKNGILRSRKLDLERKGKAATFQPGGVGTAGCSEAAES 180

Query: 181 MNTNEGNMPCKTNRRRQSRQESFGTSVLKTEVQKVESKRPRRQSARFKTEEPVAANHILE 240
           MNTNEGNMPCKTNRRRQSRQESFGTSVLKTEVQKVESKRPRRQSARFKTEEPVAANHILE
Sbjct: 181 MNTNEGNMPCKTNRRRQSRQESFGTSVLKTEVQKVESKRPRRQSARFKTEEPVAANHILE 240

Query: 241 TDNSNSNDALQCKETSVHRAEVQKVEGKRPCSRKQSARLKIEEPVATNDLLGIENFNSTD 300
           TDNSNSNDALQCKETSVHRAEVQKVEGKRPCSRKQSARLKIEEPVATNDLLGIENFNSTD
Sbjct: 241 TDNSNSNDALQCKETSVHRAEVQKVEGKRPCSRKQSARLKIEEPVATNDLLGIENFNSTD 300

Query: 301 ASQCRETSVLQTEVQKVEGIRPCLRRQSARFKLEEPVAIKDSLDTVNSNSTSASLCKEIV 360
           ASQCRETSVLQTEVQKVEGIRPCLRRQSARFKLEEPVAIKDSLDTVNSNSTSASLCKEIV
Sbjct: 301 ASQCRETSVLQTEVQKVEGIRPCLRRQSARFKLEEPVAIKDSLDTVNSNSTSASLCKEIV 360

Query: 361 CEVKIVPTSSVETEDNGNSTDRSEVQERRRTSVGRPLRRAAEKIQSYKEIPLNVKMRRPV 371
           CEVKIVPTSSVETEDNGNSTDRSEVQERRRTSVGRPLRRAAEKIQSYKEIPLNVKMRRPV
Sbjct: 361 CEVKIVPTSSVETEDNGNSTDRSEVQERRRTSVGRPLRRAAEKIQSYKEIPLNVKMRRPV 420

[Close]

BLAST of Cp4.1LG13g10300 vs. NCBI nr
Match: XP_023550312.1 (SHUGOSHIN 2-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 674 bits (1740), Expect = 1.53e-242
Identity = 370/419 (88.31%), Postives = 370/419 (88.31%), Query Frame = 0


Query: 1   MECSISLDSKNYGVGASQNMEIAGVKTMKSSKVGGAQRKRLSDISNLKEQPVLQKGDTKQ 60
           MECSISLDSKNYGVGASQNMEIAGVKTMKSSKVGGAQRKRLSDISNLKEQPVLQKGDTKQ
Sbjct: 1   MECSISLDSKNYGVGASQNMEIAGVKTMKSSKVGGAQRKRLSDISNLKEQPVLQKGDTKQ 60

Query: 61  QSSLLKTYEYVDKLQKE------------------------------------------- 120
           QSSLLKTYEYVDKLQKE                                           
Sbjct: 61  QSSLLKTYEYVDKLQKENMALTKVLAERNRIIEISGNELETLRTNFQKLQQQNLQFAQAN 120

Query: 121 ------LNSGKERLKALQHELGCKNGILRSRKLDLERKGKAATFQPGGVGTAGCSEAAES 180
                 LNSGKERLKALQHELGCKNGILRSRKLDLERKGKAATFQPGGVGTAGCSEAAES
Sbjct: 121 SQMLAELNSGKERLKALQHELGCKNGILRSRKLDLERKGKAATFQPGGVGTAGCSEAAES 180

Query: 181 MNTNEGNMPCKTNRRRQSRQESFGTSVLKTEVQKVESKRPRRQSARFKTEEPVAANHILE 240
           MNTNEGNMPCKTNRRRQSRQESFGTSVLKTEVQKVESKRPRRQSARFKTEEPVAANHILE
Sbjct: 181 MNTNEGNMPCKTNRRRQSRQESFGTSVLKTEVQKVESKRPRRQSARFKTEEPVAANHILE 240

Query: 241 TDNSNSNDALQCKETSVHRAEVQKVEGKRPCSRKQSARLKIEEPVATNDLLGIENFNSTD 300
           TDNSNSNDALQCKETSVHRAEVQKVEGKRPCSRKQSARLKIEEPVATNDLLGIENFNSTD
Sbjct: 241 TDNSNSNDALQCKETSVHRAEVQKVEGKRPCSRKQSARLKIEEPVATNDLLGIENFNSTD 300

Query: 301 ASQCRETSVLQTEVQKVEGIRPCLRRQSARFKLEEPVAIKDSLDTVNSNSTSASLCKEIV 360
           ASQCRETSVLQTEVQKVEGIRPCLRRQSARFKLEEPVAIKDSLDTVNSNSTSASLCKEIV
Sbjct: 301 ASQCRETSVLQTEVQKVEGIRPCLRRQSARFKLEEPVAIKDSLDTVNSNSTSASLCKEIV 360

Query: 361 CEVKIVPTSSVETEDNGNSTDRSEVQERRRTSVGRPLRRAAEKIQSYKEIPLNVKMRRP 370
           CEVKIVPTSSVETEDNGNSTDRSEVQERRRTSVGRPLRRAAEKIQSYKEIPLNVKMRRP
Sbjct: 361 CEVKIVPTSSVETEDNGNSTDRSEVQERRRTSVGRPLRRAAEKIQSYKEIPLNVKMRRP 419

[Close]

BLAST of Cp4.1LG13g10300 vs. NCBI nr
Match: XP_023550314.1 (SHUGOSHIN 2-like isoform X4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 670 bits (1728), Expect = 8.55e-241
Identity = 370/420 (88.10%), Postives = 370/420 (88.10%), Query Frame = 0


Query: 1   MECSISLDSKNYGVGASQNMEIAGVKTMKSSKVGGAQRKRLSDISNLKEQPVLQKGDTKQ 60
           MECSISLDSKNYGVGASQNMEIAGVKTMKSSKVGGAQRKRLSDISNLKEQPVLQKGDTKQ
Sbjct: 1   MECSISLDSKNYGVGASQNMEIAGVKTMKSSKVGGAQRKRLSDISNLKEQPVLQKGDTKQ 60

Query: 61  QSSLLKTYEYVDKLQKE------------------------------------------- 120
           QSSLLKTYEYVDKLQKE                                           
Sbjct: 61  QSSLLKTYEYVDKLQKENMALTKVLAERNRIIEISGNELETLRTNFQKLQQQNLQFAQAN 120

Query: 121 ------LNSGKERLKALQHELGCKNGILRSRKLDLERKGKAATFQPGGVGTAGCSEAAES 180
                 LNSGKERLKALQHELGCKNGILRSRKLDLERKGKAATFQPGGVGTAGCSEAAES
Sbjct: 121 SQMLAELNSGKERLKALQHELGCKNGILRSRKLDLERKGKAATFQPGGVGTAGCSEAAES 180

Query: 181 MNTNEGNMPCKTNRRRQSRQESFGTSVLKTEVQKVESKRPRRQSARFKTEEPVAANHILE 240
           MNTNEGNMPCKTNRRRQSRQESFGTSVLKTEVQKVESKRPRRQSARFKTEEPVAANHILE
Sbjct: 181 MNTNEGNMPCKTNRRRQSRQESFGTSVLKTEVQKVESKRPRRQSARFKTEEPVAANHILE 240

Query: 241 TDNSNSNDALQCKETSVHRAEVQKVEGKRPCSRKQSARLKIEEPVATNDLLGIENFNSTD 300
           TDNSNSNDALQCKETSVHRAEVQKVEGKRPCSRKQSARLKIEEPVATNDLLGIENFNSTD
Sbjct: 241 TDNSNSNDALQCKETSVHRAEVQKVEGKRPCSRKQSARLKIEEPVATNDLLGIENFNSTD 300

Query: 301 ASQCRETSVLQTEVQKVEGI-RPCLRRQSARFKLEEPVAIKDSLDTVNSNSTSASLCKEI 360
           ASQCRETSVLQTEVQKVEGI RPCLRRQSARFKLEEPVAIKDSLDTVNSNSTSASLCKEI
Sbjct: 301 ASQCRETSVLQTEVQKVEGISRPCLRRQSARFKLEEPVAIKDSLDTVNSNSTSASLCKEI 360

Query: 361 VCEVKIVPTSSVETEDNGNSTDRSEVQERRRTSVGRPLRRAAEKIQSYKEIPLNVKMRRP 370
           VCEVKIVPTSSVETEDNGNSTDRSEVQERRRTSVGRPLRRAAEKIQSYKEIPLNVKMRRP
Sbjct: 361 VCEVKIVPTSSVETEDNGNSTDRSEVQERRRTSVGRPLRRAAEKIQSYKEIPLNVKMRRP 420

[Close]

BLAST of Cp4.1LG13g10300 vs. NCBI nr
Match: XP_023550311.1 (SHUGOSHIN 2-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 670 bits (1728), Expect = 1.07e-240
Identity = 370/420 (88.10%), Postives = 370/420 (88.10%), Query Frame = 0


Query: 1   MECSISLDSKNYGVGASQNMEIAGVKTMKSSKVGGAQRKRLSDISNLKEQPVLQKGDTKQ 60
           MECSISLDSKNYGVGASQNMEIAGVKTMKSSKVGGAQRKRLSDISNLKEQPVLQKGDTKQ
Sbjct: 1   MECSISLDSKNYGVGASQNMEIAGVKTMKSSKVGGAQRKRLSDISNLKEQPVLQKGDTKQ 60

Query: 61  QSSLLKTYEYVDKLQKE------------------------------------------- 120
           QSSLLKTYEYVDKLQKE                                           
Sbjct: 61  QSSLLKTYEYVDKLQKENMALTKVLAERNRIIEISGNELETLRTNFQKLQQQNLQFAQAN 120

Query: 121 ------LNSGKERLKALQHELGCKNGILRSRKLDLERKGKAATFQPGGVGTAGCSEAAES 180
                 LNSGKERLKALQHELGCKNGILRSRKLDLERKGKAATFQPGGVGTAGCSEAAES
Sbjct: 121 SQMLAELNSGKERLKALQHELGCKNGILRSRKLDLERKGKAATFQPGGVGTAGCSEAAES 180

Query: 181 MNTNEGNMPCKTNRRRQSRQESFGTSVLKTEVQKVESKRPRRQSARFKTEEPVAANHILE 240
           MNTNEGNMPCKTNRRRQSRQESFGTSVLKTEVQKVESKRPRRQSARFKTEEPVAANHILE
Sbjct: 181 MNTNEGNMPCKTNRRRQSRQESFGTSVLKTEVQKVESKRPRRQSARFKTEEPVAANHILE 240

Query: 241 TDNSNSNDALQCKETSVHRAEVQKVEGKRPCSRKQSARLKIEEPVATNDLLGIENFNSTD 300
           TDNSNSNDALQCKETSVHRAEVQKVEGKRPCSRKQSARLKIEEPVATNDLLGIENFNSTD
Sbjct: 241 TDNSNSNDALQCKETSVHRAEVQKVEGKRPCSRKQSARLKIEEPVATNDLLGIENFNSTD 300

Query: 301 ASQCRETSVLQTEVQKVEGI-RPCLRRQSARFKLEEPVAIKDSLDTVNSNSTSASLCKEI 360
           ASQCRETSVLQTEVQKVEGI RPCLRRQSARFKLEEPVAIKDSLDTVNSNSTSASLCKEI
Sbjct: 301 ASQCRETSVLQTEVQKVEGISRPCLRRQSARFKLEEPVAIKDSLDTVNSNSTSASLCKEI 360

Query: 361 VCEVKIVPTSSVETEDNGNSTDRSEVQERRRTSVGRPLRRAAEKIQSYKEIPLNVKMRRP 370
           VCEVKIVPTSSVETEDNGNSTDRSEVQERRRTSVGRPLRRAAEKIQSYKEIPLNVKMRRP
Sbjct: 361 VCEVKIVPTSSVETEDNGNSTDRSEVQERRRTSVGRPLRRAAEKIQSYKEIPLNVKMRRP 420

[Close]

BLAST of Cp4.1LG13g10300 vs. NCBI nr
Match: XP_022939486.1 (SHUGOSHIN 2-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 641 bits (1653), Expect = 2.26e-229
Identity = 355/420 (84.52%), Postives = 358/420 (85.24%), Query Frame = 0


Query: 1   MECSISLDSKNYGVGASQNMEIAGVKTMKSSKVGGAQRKRLSDISNLKEQPVLQKGDTKQ 60
           MECSISLDSKNYGVGASQNMEIAGVKTMKSSKVGGAQRKRLSDISNLKEQPVLQK DT Q
Sbjct: 1   MECSISLDSKNYGVGASQNMEIAGVKTMKSSKVGGAQRKRLSDISNLKEQPVLQKRDTTQ 60

Query: 61  QSSLLKTYEYVDKLQKE------------------------------------------- 120
           QSSLLKTYEYVDKLQKE                                           
Sbjct: 61  QSSLLKTYEYVDKLQKENMALTKVLAERNHIIEISRNELETLRTNFQKLQQQNLQFAQAN 120

Query: 121 ------LNSGKERLKALQHELGCKNGILRSRKLDLERKGKAATFQPGGVGTAGCSEAAES 180
                 LNSGKERLKALQHELGCKNGIL SRK DLERKGKA TFQPGGVGTA CSEA ES
Sbjct: 121 SQMFAELNSGKERLKALQHELGCKNGILMSRKSDLERKGKAVTFQPGGVGTAECSEAVES 180

Query: 181 MNTNEGNMPCKTNRRRQSRQESFGTSVLKTEVQKVESKRPRRQSARFKTEEPVAANHILE 240
           MNTNEGN PCKTNRRRQSR+ESFGTSVL+TEV KVESKRPRRQSARFKTEEPVAANHILE
Sbjct: 181 MNTNEGNRPCKTNRRRQSRKESFGTSVLQTEVHKVESKRPRRQSARFKTEEPVAANHILE 240

Query: 241 TDNSNSNDALQCKETSVHRAEVQKVEGKRPCSRKQSARLKIEEPVATNDLLGIENFNSTD 300
           TDNSNSNDALQCKETSV RAEVQKVEGKRPCSR+QSARLK EEPVATNDLLGIENFNSTD
Sbjct: 241 TDNSNSNDALQCKETSVRRAEVQKVEGKRPCSRRQSARLKNEEPVATNDLLGIENFNSTD 300

Query: 301 ASQCRETSVLQTEVQKVEGIRPCLRRQSARFKLEEPVAIKDSLDTVNSNSTSASLCKEIV 360
           ASQCRETSVLQTEVQK EGIRPCLRRQSARFKLEEPVAIKDSLDTVNSNSTSASLC EIV
Sbjct: 301 ASQCRETSVLQTEVQKGEGIRPCLRRQSARFKLEEPVAIKDSLDTVNSNSTSASLCNEIV 360

Query: 361 CEVKIVPTSSVETEDNGNSTDRSEVQERRRTSVGRPLRRAAEKIQSYKEIPLNVKMRRPV 371
           CEVKIVPTSSVETEDNGNSTDRSEVQERRRTSVGRPLRRAAEKIQSYKEIPLNVKMRRPV
Sbjct: 361 CEVKIVPTSSVETEDNGNSTDRSEVQERRRTSVGRPLRRAAEKIQSYKEIPLNVKMRRPV 420

[Close]

BLAST of Cp4.1LG13g10300 vs. ExPASy TrEMBL
Match: A0A6J1FG21 (SHUGOSHIN 2-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111445376 PE=3 SV=1)

HSP 1 Score: 641 bits (1653), Expect = 1.09e-229
Identity = 355/420 (84.52%), Postives = 358/420 (85.24%), Query Frame = 0


Query: 1   MECSISLDSKNYGVGASQNMEIAGVKTMKSSKVGGAQRKRLSDISNLKEQPVLQKGDTKQ 60
           MECSISLDSKNYGVGASQNMEIAGVKTMKSSKVGGAQRKRLSDISNLKEQPVLQK DT Q
Sbjct: 1   MECSISLDSKNYGVGASQNMEIAGVKTMKSSKVGGAQRKRLSDISNLKEQPVLQKRDTTQ 60

Query: 61  QSSLLKTYEYVDKLQKE------------------------------------------- 120
           QSSLLKTYEYVDKLQKE                                           
Sbjct: 61  QSSLLKTYEYVDKLQKENMALTKVLAERNHIIEISRNELETLRTNFQKLQQQNLQFAQAN 120

Query: 121 ------LNSGKERLKALQHELGCKNGILRSRKLDLERKGKAATFQPGGVGTAGCSEAAES 180
                 LNSGKERLKALQHELGCKNGIL SRK DLERKGKA TFQPGGVGTA CSEA ES
Sbjct: 121 SQMFAELNSGKERLKALQHELGCKNGILMSRKSDLERKGKAVTFQPGGVGTAECSEAVES 180

Query: 181 MNTNEGNMPCKTNRRRQSRQESFGTSVLKTEVQKVESKRPRRQSARFKTEEPVAANHILE 240
           MNTNEGN PCKTNRRRQSR+ESFGTSVL+TEV KVESKRPRRQSARFKTEEPVAANHILE
Sbjct: 181 MNTNEGNRPCKTNRRRQSRKESFGTSVLQTEVHKVESKRPRRQSARFKTEEPVAANHILE 240

Query: 241 TDNSNSNDALQCKETSVHRAEVQKVEGKRPCSRKQSARLKIEEPVATNDLLGIENFNSTD 300
           TDNSNSNDALQCKETSV RAEVQKVEGKRPCSR+QSARLK EEPVATNDLLGIENFNSTD
Sbjct: 241 TDNSNSNDALQCKETSVRRAEVQKVEGKRPCSRRQSARLKNEEPVATNDLLGIENFNSTD 300

Query: 301 ASQCRETSVLQTEVQKVEGIRPCLRRQSARFKLEEPVAIKDSLDTVNSNSTSASLCKEIV 360
           ASQCRETSVLQTEVQK EGIRPCLRRQSARFKLEEPVAIKDSLDTVNSNSTSASLC EIV
Sbjct: 301 ASQCRETSVLQTEVQKGEGIRPCLRRQSARFKLEEPVAIKDSLDTVNSNSTSASLCNEIV 360

Query: 361 CEVKIVPTSSVETEDNGNSTDRSEVQERRRTSVGRPLRRAAEKIQSYKEIPLNVKMRRPV 371
           CEVKIVPTSSVETEDNGNSTDRSEVQERRRTSVGRPLRRAAEKIQSYKEIPLNVKMRRPV
Sbjct: 361 CEVKIVPTSSVETEDNGNSTDRSEVQERRRTSVGRPLRRAAEKIQSYKEIPLNVKMRRPV 420

[Close]

BLAST of Cp4.1LG13g10300 vs. ExPASy TrEMBL
Match: A0A6J1FHB1 (SHUGOSHIN 2-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445376 PE=3 SV=1)

HSP 1 Score: 636 bits (1641), Expect = 7.62e-228
Identity = 355/421 (84.32%), Postives = 358/421 (85.04%), Query Frame = 0


Query: 1   MECSISLDSKNYGVGASQNMEIAGVKTMKSSKVGGAQRKRLSDISNLKEQPVLQKGDTKQ 60
           MECSISLDSKNYGVGASQNMEIAGVKTMKSSKVGGAQRKRLSDISNLKEQPVLQK DT Q
Sbjct: 1   MECSISLDSKNYGVGASQNMEIAGVKTMKSSKVGGAQRKRLSDISNLKEQPVLQKRDTTQ 60

Query: 61  QSSLLKTYEYVDKLQKE------------------------------------------- 120
           QSSLLKTYEYVDKLQKE                                           
Sbjct: 61  QSSLLKTYEYVDKLQKENMALTKVLAERNHIIEISRNELETLRTNFQKLQQQNLQFAQAN 120

Query: 121 ------LNSGKERLKALQHELGCKNGILRSRKLDLERKGKAATFQPGGVGTAGCSEAAES 180
                 LNSGKERLKALQHELGCKNGIL SRK DLERKGKA TFQPGGVGTA CSEA ES
Sbjct: 121 SQMFAELNSGKERLKALQHELGCKNGILMSRKSDLERKGKAVTFQPGGVGTAECSEAVES 180

Query: 181 MNTNEGNMPCKTNRRRQSRQESFGTSVLKTEVQKVESKRPRRQSARFKTEEPVAANHILE 240
           MNTNEGN PCKTNRRRQSR+ESFGTSVL+TEV KVESKRPRRQSARFKTEEPVAANHILE
Sbjct: 181 MNTNEGNRPCKTNRRRQSRKESFGTSVLQTEVHKVESKRPRRQSARFKTEEPVAANHILE 240

Query: 241 TDNSNSNDALQCKETSVHRAEVQKVEGKRPCSRKQSARLKIEEPVATNDLLGIENFNSTD 300
           TDNSNSNDALQCKETSV RAEVQKVEGKRPCSR+QSARLK EEPVATNDLLGIENFNSTD
Sbjct: 241 TDNSNSNDALQCKETSVRRAEVQKVEGKRPCSRRQSARLKNEEPVATNDLLGIENFNSTD 300

Query: 301 ASQCRETSVLQTEVQKVEGI-RPCLRRQSARFKLEEPVAIKDSLDTVNSNSTSASLCKEI 360
           ASQCRETSVLQTEVQK EGI RPCLRRQSARFKLEEPVAIKDSLDTVNSNSTSASLC EI
Sbjct: 301 ASQCRETSVLQTEVQKGEGISRPCLRRQSARFKLEEPVAIKDSLDTVNSNSTSASLCNEI 360

Query: 361 VCEVKIVPTSSVETEDNGNSTDRSEVQERRRTSVGRPLRRAAEKIQSYKEIPLNVKMRRP 371
           VCEVKIVPTSSVETEDNGNSTDRSEVQERRRTSVGRPLRRAAEKIQSYKEIPLNVKMRRP
Sbjct: 361 VCEVKIVPTSSVETEDNGNSTDRSEVQERRRTSVGRPLRRAAEKIQSYKEIPLNVKMRRP 420

[Close]

BLAST of Cp4.1LG13g10300 vs. ExPASy TrEMBL
Match: A0A6J1FMU6 (SHUGOSHIN 2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445376 PE=3 SV=1)

HSP 1 Score: 635 bits (1637), Expect = 3.10e-227
Identity = 354/420 (84.29%), Postives = 357/420 (85.00%), Query Frame = 0


Query: 1   MECSISLDSKNYGVGASQNMEIAGVKTMKSSKVGGAQRKRLSDISNLKEQPVLQKGDTKQ 60
           MECSISLDSKNYGVGASQNMEIAGVKTMKSSKVGGAQRKRLSDISNLKEQPVLQK DT Q
Sbjct: 1   MECSISLDSKNYGVGASQNMEIAGVKTMKSSKVGGAQRKRLSDISNLKEQPVLQKRDTTQ 60

Query: 61  QSSLLKTYEYVDKLQKE------------------------------------------- 120
           QSSLLKTYEYVDKLQKE                                           
Sbjct: 61  QSSLLKTYEYVDKLQKENMALTKVLAERNHIIEISRNELETLRTNFQKLQQQNLQFAQAN 120

Query: 121 ------LNSGKERLKALQHELGCKNGILRSRKLDLERKGKAATFQPGGVGTAGCSEAAES 180
                 LNSGKERLKALQHELGCKNGIL SRK DLERKGKA TFQPGGVGTA CSEA ES
Sbjct: 121 SQMFAELNSGKERLKALQHELGCKNGILMSRKSDLERKGKAVTFQPGGVGTAECSEAVES 180

Query: 181 MNTNEGNMPCKTNRRRQSRQESFGTSVLKTEVQKVESKRPRRQSARFKTEEPVAANHILE 240
           MNTNEGN PCKTNRRRQSR+ESFGTSVL+TEV KVESKRPRRQSARFKTEEPVAANHILE
Sbjct: 181 MNTNEGNRPCKTNRRRQSRKESFGTSVLQTEVHKVESKRPRRQSARFKTEEPVAANHILE 240

Query: 241 TDNSNSNDALQCKETSVHRAEVQKVEGKRPCSRKQSARLKIEEPVATNDLLGIENFNSTD 300
           TDNSNSNDALQCKETSV RAEVQKVEGKRPCSR+QSARLK EEPVATNDLLGIENFNSTD
Sbjct: 241 TDNSNSNDALQCKETSVRRAEVQKVEGKRPCSRRQSARLKNEEPVATNDLLGIENFNSTD 300

Query: 301 ASQCRETSVLQTEVQKVEGI-RPCLRRQSARFKLEEPVAIKDSLDTVNSNSTSASLCKEI 360
           ASQCRETSVLQTEVQK EGI RPCLRRQSARFKLEEPVAIKDSLDTVNSNSTSASLC EI
Sbjct: 301 ASQCRETSVLQTEVQKGEGISRPCLRRQSARFKLEEPVAIKDSLDTVNSNSTSASLCNEI 360

Query: 361 VCEVKIVPTSSVETEDNGNSTDRSEVQERRRTSVGRPLRRAAEKIQSYKEIPLNVKMRRP 370
           VCEVKIVPTSSVETEDNGNSTDRSEVQERRRTSVGRPLRRAAEKIQSYKEIPLNVKMRRP
Sbjct: 361 VCEVKIVPTSSVETEDNGNSTDRSEVQERRRTSVGRPLRRAAEKIQSYKEIPLNVKMRRP 420

[Close]

BLAST of Cp4.1LG13g10300 vs. ExPASy TrEMBL
Match: A0A6J1JYY1 (SHUGOSHIN 2-like isoform X7 OS=Cucurbita maxima OX=3661 GN=LOC111489140 PE=3 SV=1)

HSP 1 Score: 626 bits (1614), Expect = 9.48e-224
Identity = 346/420 (82.38%), Postives = 357/420 (85.00%), Query Frame = 0


Query: 1   MECSISLDSKNYGVGASQNMEIAGVKTMKSSKVGGAQRKRLSDISNLKEQPVLQKGDTKQ 60
           MEC+ SLDSKNYGVGASQNMEIAGVKTMKSSKVGG+QRKRLSDISNLKEQP+LQK DTK 
Sbjct: 1   MECNTSLDSKNYGVGASQNMEIAGVKTMKSSKVGGSQRKRLSDISNLKEQPILQKRDTKP 60

Query: 61  QSSLLKTYEYVDKLQKE------------------------------------------- 120
           QSSLLKTYEYVDKLQKE                                           
Sbjct: 61  QSSLLKTYEYVDKLQKENMALTKVLAERNRIIEISGNELETLRTNFQKLQQQNLQFAQAN 120

Query: 121 ------LNSGKERLKALQHELGCKNGILRSRKLDLERKGKAATFQPGGVGTAGCSEAAES 180
                 LNSGKERLKALQHELGCKNGIL SRKLDLERKGK+ATFQPGGVGTA  SEAAES
Sbjct: 121 SQMLAELNSGKERLKALQHELGCKNGILMSRKLDLERKGKSATFQPGGVGTAKSSEAAES 180

Query: 181 MNTNEGNMPCKTNRRRQSRQESFGTSVLKTEVQKVESKRPRRQSARFKTEEPVAANHILE 240
           MNT + N PCKTNRRRQSRQESFGTSVL+TEVQKVE KRPRRQSARFKTEEPVAAN ILE
Sbjct: 181 MNTKQDNRPCKTNRRRQSRQESFGTSVLQTEVQKVEGKRPRRQSARFKTEEPVAANDILE 240

Query: 241 TDNSNSNDALQCKETSVHRAEVQKVEGKRPCSRKQSARLKIEEPVATNDLLGIENFNSTD 300
           TDNSNSN++ QCKETSV RAEVQKVEGKRPCSR+QSARLKIEEPVATNDLLGIENFNSTD
Sbjct: 241 TDNSNSNNSSQCKETSVRRAEVQKVEGKRPCSRRQSARLKIEEPVATNDLLGIENFNSTD 300

Query: 301 ASQCRETSVLQTEVQKVEGIRPCLRRQSARFKLEEPVAIKDSLDTVNSNSTSASLCKEIV 360
           ASQCRETSVLQTEVQKVEGIRPCLRRQSARFKLEEPVAIKDSLDTVNSNSTSASLCKEIV
Sbjct: 301 ASQCRETSVLQTEVQKVEGIRPCLRRQSARFKLEEPVAIKDSLDTVNSNSTSASLCKEIV 360

Query: 361 CEVKIVPTSSVETEDNGNSTDRSEVQERRRTSVGRPLRRAAEKIQSYKEIPLNVKMRRPV 371
           CE+KIVPTSSVET+DNGNSTDRSEVQE RRTSVGRPLRRAAEKIQSYKEIPLNVKMRRPV
Sbjct: 361 CEIKIVPTSSVETKDNGNSTDRSEVQECRRTSVGRPLRRAAEKIQSYKEIPLNVKMRRPV 420

[Close]

BLAST of Cp4.1LG13g10300 vs. ExPASy TrEMBL
Match: A0A6J1JX77 (SHUGOSHIN 2-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111489140 PE=3 SV=1)

HSP 1 Score: 624 bits (1610), Expect = 1.78e-222
Identity = 345/419 (82.34%), Postives = 356/419 (84.96%), Query Frame = 0


Query: 1   MECSISLDSKNYGVGASQNMEIAGVKTMKSSKVGGAQRKRLSDISNLKEQPVLQKGDTKQ 60
           MEC+ SLDSKNYGVGASQNMEIAGVKTMKSSKVGG+QRKRLSDISNLKEQP+LQK DTK 
Sbjct: 1   MECNTSLDSKNYGVGASQNMEIAGVKTMKSSKVGGSQRKRLSDISNLKEQPILQKRDTKP 60

Query: 61  QSSLLKTYEYVDKLQKE------------------------------------------- 120
           QSSLLKTYEYVDKLQKE                                           
Sbjct: 61  QSSLLKTYEYVDKLQKENMALTKVLAERNRIIEISGNELETLRTNFQKLQQQNLQFAQAN 120

Query: 121 ------LNSGKERLKALQHELGCKNGILRSRKLDLERKGKAATFQPGGVGTAGCSEAAES 180
                 LNSGKERLKALQHELGCKNGIL SRKLDLERKGK+ATFQPGGVGTA  SEAAES
Sbjct: 121 SQMLAELNSGKERLKALQHELGCKNGILMSRKLDLERKGKSATFQPGGVGTAKSSEAAES 180

Query: 181 MNTNEGNMPCKTNRRRQSRQESFGTSVLKTEVQKVESKRPRRQSARFKTEEPVAANHILE 240
           MNT + N PCKTNRRRQSRQESFGTSVL+TEVQKVE KRPRRQSARFKTEEPVAAN ILE
Sbjct: 181 MNTKQDNRPCKTNRRRQSRQESFGTSVLQTEVQKVEGKRPRRQSARFKTEEPVAANDILE 240

Query: 241 TDNSNSNDALQCKETSVHRAEVQKVEGKRPCSRKQSARLKIEEPVATNDLLGIENFNSTD 300
           TDNSNSN++ QCKETSV RAEVQKVEGKRPCSR+QSARLKIEEPVATNDLLGIENFNSTD
Sbjct: 241 TDNSNSNNSSQCKETSVRRAEVQKVEGKRPCSRRQSARLKIEEPVATNDLLGIENFNSTD 300

Query: 301 ASQCRETSVLQTEVQKVEGIRPCLRRQSARFKLEEPVAIKDSLDTVNSNSTSASLCKEIV 360
           ASQCRETSVLQTEVQKVEGIRPCLRRQSARFKLEEPVAIKDSLDTVNSNSTSASLCKEIV
Sbjct: 301 ASQCRETSVLQTEVQKVEGIRPCLRRQSARFKLEEPVAIKDSLDTVNSNSTSASLCKEIV 360

Query: 361 CEVKIVPTSSVETEDNGNSTDRSEVQERRRTSVGRPLRRAAEKIQSYKEIPLNVKMRRP 370
           CE+KIVPTSSVET+DNGNSTDRSEVQE RRTSVGRPLRRAAEKIQSYKEIPLNVKMRRP
Sbjct: 361 CEIKIVPTSSVETKDNGNSTDRSEVQECRRTSVGRPLRRAAEKIQSYKEIPLNVKMRRP 419

[Close]

BLAST of Cp4.1LG13g10300 vs. TAIR 10
Match: AT5G04320.1 (Shugoshin C terminus )

HSP 1 Score: 70.1 bits (170), Expect = 4.3e-12
Identity = 106/412 (25.73%), Postives = 174/412 (42.23%), Query Frame = 0


Query: 36  AQRKRLSDISNLKEQPVLQKGDTKQQSSLLKTYEYVDKLQKELNSGKERLKALQHELGCK 95
           A R +L ++S ++ Q  L+      Q   L+  +   ++  ELN+ ++RLK LQHELGCK
Sbjct: 8   AHRNKLVELSGIEIQK-LRINLRSVQEKNLQLAQANSQMLAELNTNRDRLKDLQHELGCK 67

Query: 96  NGILRSRKLDLERKGKAATFQPGGVGTAGCSEAAESMNTNEGNMPCK-TNRRRQSR-QES 155
           N +L+ +K  LE +    T        +  +   +  +    ++  K T R+R +R + S
Sbjct: 68  NALLKVKK-HLEEQVLPRTHHESKDKVSASASDGDCKSFQVHDIKHKDTKRKRTTRIKSS 127

Query: 156 FGTSVLKTEVQKVESK--RPRRQSARF----------KTEEPVAANHILETDNSNSNDAL 215
               V    V    SK  R RR S             +TE+ +    +    N + ++ +
Sbjct: 128 VSADVKPIPVNDSNSKANRKRRVSGVIDTTGIPEEICQTEDDIDKGVVSRGVNQDIDNVV 187

Query: 216 QCKETSVHRAEV-QKVEGKRPCSRKQSARLKIEEPVATNDLLGI----ENFNSTDASQCR 275
             K        V + V  KR C+R+QS R  ++E   T  LL +    E+  +   S  R
Sbjct: 188 NKKFVPDAANPVKESVHRKRQCTRRQSTRFDVQETKQTEKLLEMDGAKESKETASFSLRR 247

Query: 276 ETSVLQTE-------VQKVEGIRPCLRRQ------SARFKLEEP-------------VAI 335
            ++ L+ E       + + + +R  ++R+      SARF ++EP             + I
Sbjct: 248 RSARLRHEEAEPCKSLHEGDEVRETIKRRRVSLRLSARFDIQEPHVTETSNADDARSIVI 307

Query: 336 KDSL-----------------------------DTVNSNSTSASLCKEIVCEVKIVPTSS 370
           ++S                               +    S +    KEI  +  +V T  
Sbjct: 308 EESAGSRSESVEPSESRHETKEITRKRSFSTRRQSTKGKSQTDEAIKEIATDPSLVNTIV 367

[Close]

BLAST of Cp4.1LG13g10300 vs. TAIR 10
Match: AT5G04320.2 (Shugoshin C terminus )

HSP 1 Score: 70.1 bits (170), Expect = 4.3e-12
Identity = 106/412 (25.73%), Postives = 174/412 (42.23%), Query Frame = 0


Query: 36  AQRKRLSDISNLKEQPVLQKGDTKQQSSLLKTYEYVDKLQKELNSGKERLKALQHELGCK 95
           A R +L ++S ++ Q  L+      Q   L+  +   ++  ELN+ ++RLK LQHELGCK
Sbjct: 59  AHRNKLVELSGIEIQK-LRINLRSVQEKNLQLAQANSQMLAELNTNRDRLKDLQHELGCK 118

Query: 96  NGILRSRKLDLERKGKAATFQPGGVGTAGCSEAAESMNTNEGNMPCK-TNRRRQSR-QES 155
           N +L+ +K  LE +    T        +  +   +  +    ++  K T R+R +R + S
Sbjct: 119 NALLKVKK-HLEEQVLPRTHHESKDKVSASASDGDCKSFQVHDIKHKDTKRKRTTRIKSS 178

Query: 156 FGTSVLKTEVQKVESK--RPRRQSARF----------KTEEPVAANHILETDNSNSNDAL 215
               V    V    SK  R RR S             +TE+ +    +    N + ++ +
Sbjct: 179 VSADVKPIPVNDSNSKANRKRRVSGVIDTTGIPEEICQTEDDIDKGVVSRGVNQDIDNVV 238

Query: 216 QCKETSVHRAEV-QKVEGKRPCSRKQSARLKIEEPVATNDLLGI----ENFNSTDASQCR 275
             K        V + V  KR C+R+QS R  ++E   T  LL +    E+  +   S  R
Sbjct: 239 NKKFVPDAANPVKESVHRKRQCTRRQSTRFDVQETKQTEKLLEMDGAKESKETASFSLRR 298

Query: 276 ETSVLQTE-------VQKVEGIRPCLRRQ------SARFKLEEP-------------VAI 335
            ++ L+ E       + + + +R  ++R+      SARF ++EP             + I
Sbjct: 299 RSARLRHEEAEPCKSLHEGDEVRETIKRRRVSLRLSARFDIQEPHVTETSNADDARSIVI 358

Query: 336 KDSL-----------------------------DTVNSNSTSASLCKEIVCEVKIVPTSS 370
           ++S                               +    S +    KEI  +  +V T  
Sbjct: 359 EESAGSRSESVEPSESRHETKEITRKRSFSTRRQSTKGKSQTDEAIKEIATDPSLVNTIV 418

[Close]

BLAST of Cp4.1LG13g10300 vs. TAIR 10
Match: AT3G10440.1 (Shugoshin C terminus )

HSP 1 Score: 52.0 bits (123), Expect = 1.2e-06
Identity = 134/578 (23.18%), Postives = 199/578 (34.43%), Query Frame = 0


Query: 11  NYGVGASQNM---EIAGVKTMKSSKVGGAQRKRLSDISNLKEQPVLQKGDTK--QQSSLL 70
           N G  AS+ +   +  G K +    +  AQR++L DI+NL+ Q  L     K  QQ+ L+
Sbjct: 8   NVGDHASEGVRTNKAKGEKMVLEPPMNSAQRRKLGDITNLQNQKNLMNQGAKHQQQAILI 67

Query: 71  KTYEYVDKLQK---------------------------------------------ELNS 130
            + E  + LQK                                             E N+
Sbjct: 68  SSKENAENLQKENTKLMKVVMERDGIKSDLKKLRIEFQKVQEQNLLLAQANTRILAEFNT 127

Query: 131 GKERLKALQHELGCKNGILRSRKLDLERK-------------------GKAATFQPGGVG 190
            K++LK LQHELGCKNG++ +RK+ L+ +                   G   TFQP    
Sbjct: 128 SKDQLKVLQHELGCKNGLVMARKMLLKEQTLPCTRHASKVKAQANACGGACKTFQPNDAD 187

Query: 191 TAGCSEAAESMNTNEGNMPCKTNRRRQSRQESFGTSVL---------------------- 250
               S  + + N+ + N    + RR   R+    + VL                      
Sbjct: 188 HEHAS-GSSNANSLQRNEKANSKRRVSGRKNPANSEVLDIIGRSGETCQMEDNIDNKKLV 247

Query: 251 -----------------------------------KTE-VQKV----------------- 310
                                              +TE +QKV                 
Sbjct: 248 SDSDNDAENHINDNVQSKRYCAGRQSSSSKTREASQTETLQKVVDAKEIKGDARFSLTKH 307

Query: 311 ----------------ESKRP-RRQSARFKTEEPVAANHILETDNSNSNDALQCKETSVH 369
                           ES+ P RR+SAR K++EP  +    ++  +        +    +
Sbjct: 308 SDWLKSQEPEPSESLYESRFPLRRRSARLKSQEPEPSESFHDSIETTKRRRSAIRSAMFN 367

The following BLAST results are available for this feature:

BLAST of Cp4.1LG13g10300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WTB8	6.0e-11	25.73	SHUGOSHIN 2 OS=Arabidopsis thaliana OX=3702 GN=SGO2 PE=2 SV=1	[more]
E3VXF2	1.3e-05	24.30	Shugoshin-1 OS=Oryza sativa subsp. japonica OX=39947 GN=SGO1 PE=2 SV=1	[more]
F4J3S1	1.7e-05	23.18	SHUGOSHIN 1 OS=Arabidopsis thaliana OX=3702 GN=SGO1 PE=3 SV=1	[more]
Q4QSC8	7.1e-04	23.38	Shugoshin-1 OS=Zea mays OX=4577 GN=SGO1 PE=2 SV=2	[more]

BLAST of Cp4.1LG13g10300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023550313.1	3.13e-243	88.33	SHUGOSHIN 2-like isoform X3 [Cucurbita pepo subsp. pepo]	[more]
XP_023550312.1	1.53e-242	88.31	SHUGOSHIN 2-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023550314.1	8.55e-241	88.10	SHUGOSHIN 2-like isoform X4 [Cucurbita pepo subsp. pepo]	[more]
XP_023550311.1	1.07e-240	88.10	SHUGOSHIN 2-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022939486.1	2.26e-229	84.52	SHUGOSHIN 2-like isoform X3 [Cucurbita moschata]	[more]

BLAST of Cp4.1LG13g10300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FG21	1.09e-229	84.52	SHUGOSHIN 2-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111445376 PE=3 S...	[more]
A0A6J1FHB1	7.62e-228	84.32	SHUGOSHIN 2-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445376 PE=3 S...	[more]
A0A6J1FMU6	3.10e-227	84.29	SHUGOSHIN 2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445376 PE=3 S...	[more]
A0A6J1JYY1	9.48e-224	82.38	SHUGOSHIN 2-like isoform X7 OS=Cucurbita maxima OX=3661 GN=LOC111489140 PE=3 SV=...	[more]
A0A6J1JX77	1.78e-222	82.34	SHUGOSHIN 2-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111489140 PE=3 SV=...	[more]

BLAST of Cp4.1LG13g10300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04320.1	4.3e-12	25.73	Shugoshin C terminus	[more]
AT5G04320.2	4.3e-12	25.73	Shugoshin C terminus	[more]
AT3G10440.1	1.2e-06	23.18	Shugoshin C terminus	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 71..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..155
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 321..351
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 328..351
None	No IPR available	PANTHER	PTHR34373:SF9	SHUGOSHIN 2	coord: 25..77
None	No IPR available	PANTHER	PTHR34373:SF9	SHUGOSHIN 2	coord: 206..370
None	No IPR available	PANTHER	PTHR34373:SF9	SHUGOSHIN 2	coord: 76..256
IPR011515	Shugoshin, C-terminal	PFAM	PF07557	Shugoshin_C	coord: 345..370 e-value: 1.1E-11 score: 44.2
IPR044693	Shugoshin, plant	PANTHER	PTHR34373	SHUGOSHIN 2	coord: 25..77
IPR044693	Shugoshin, plant	PANTHER	PTHR34373	SHUGOSHIN 2	coord: 206..370
IPR044693	Shugoshin, plant	PANTHER	PTHR34373	SHUGOSHIN 2	coord: 76..256

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG13g10300.1	Cp4.1LG13g10300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034090	maintenance of meiotic sister chromatid cohesion
biological_process	GO:0045132	meiotic chromosome segregation
biological_process	GO:0045144	meiotic sister chromatid segregation
cellular_component	GO:0000775	chromosome, centromeric region
cellular_component	GO:0005634	nucleus