Cp4.1LG13g09700 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG13g09700
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionActin-depolymerizing factor
LocationCp4.1LG13: 7430677 .. 7439751 (+)
RNA-Seq ExpressionCp4.1LG13g09700
SyntenyCp4.1LG13g09700
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCTTGCTCCCTTCGAAGAGAAGACAACCAGAAGCTTATTGTCTTTTGATGGACAGAAAAATGTTAGTACTCTGTAATGCTTGATAGACAAAACTTTTTGGTGATGATTGGCTTACACTTGAAAATGTGAGCTCATATAATCTGCATAGTTAGAATTGGGTAATTTGTGTTTAGATTGTAGATTTATGATTATGAACGTCTTCTAAGAGTTAAGTTTATATTCATATAGCCTAAGATTTTGGTTTGGCTTCTAAATTTGGGTTTCATAAGTTTAATCTGTGAACTAAACACCCTTTTATAGATAGGTATTACCAGCTAGATTATCTAGAATTAGAAGATTATAGAGTCAGTGTTAAGGAGAACTAATGGGTTGGTTCTACTTGTTAATATGCATTAGAACAATGACGTATATTACAATCCTAAATAGCTGATCTCAAATAGAAAACACCCTTCCATAATAGAATTAATTTCCATATGAAGATTTTTTTTTCTTATAATTTGTCTGTATATGTGCAGCTATTATTGTTCTTCCATATGTCATGCTCTAAAGCTGTTTTGGTTAGTGGTGAATGTATAGAAATATTCAACAATATGGTGATGAATGAACCAGTAACCTGAGAAGACAATTATGCTGATAGATTTCATACTCATTGATTATTCAGAGTGATTATACTGTGATCTTCATGAAATGTAGGGACTAAAATCTTGCTTCCTTATCATTTACTGATAATCATGTGATTTTGGATCTCTACTTTCTGTCATACTAGGTTTGAATTCTTGTGAATCTAAGTTTGTATATTTGATTGTGATAATTAGAAAATTTAGGCCACTGTTAAAGAATTAGGCTTAGTGGGCATCCCATTAATTAGCGTTTTTTCTTCAGCTCGTATTTATTTCTAGATGTTTTGTAGTTTCCTGACAAAGTTTAAAGGGACTAGAAGATGGTTGTGAGGTCCCACATCGGTTGGAGAGGGGAACAAAATATTTTAAAACCGTAGACACATTTTAAAACCTCTCCCTACTTGACACGTTTTAAAACTGTGAAGCTGACAGCGATACGTAAACAAAGCGGACAATACCTGTCAGCGATGGGCGTAGGCTATTACAATGGCTGAATTGGAATGATTTAAAATGGATCCATGGTGTAAACACATCTAAATAATCTCCATTTCTTAGTTCAGATTAGGAATATGATCTTATTATTATTGTTTTAGGTCCTCTATGATTACTTATTTTATTGTGAAAGTTGAAATTATGGTATATAATGCACTCTATAATGGTATATAATGCATAAACTTTGTCATAATTATTTGGACTAATGTACAATTTTATATAGTTTTGTACGCTAATCTATACTAACCTGTGAAAGGAGATCCAAATTTTATATAGTTTTATATCTATATTTGACTAGCTATACTATCCACCTATCCTGCAATTATCTGTATGAATCAAACCAAGTCAAATTTGGTGAAAGCGAAACCAAACAGATAGCTACAAAATTTGCCAAAATTTAGATGTAAAGCCGACCCTCTTCTCACTCTGCAAGGTTCTTAGTCAGTTGGTCGTTTTATATGCCTTTCATACATTGAATATGCTTGTGATATTAGAACTCTCTATGAAAGGGAAATTTTCATCCTCACACTCAACAGATCTTGTTCTTATTTTCTATAAACAATCACAGTTATAATCGACAATAAAATCTGATTGTTTGCAGCTTATTGGTTCTGTTTTAAAAATATATATTACCAACAGTTACAGATTCATCACTCCATTATGTACAGTAAAATATTGTTTACTCTGACCATGAGTTGATTTTAGTATGCTTGTATTATTAAATCATCAATTTGAATCTCTTTTCATATTAAAAAAAATGGTTATCAAACCAAGTTAATTTAACGTGCATTTTCTTTTCTGAGTAAATAACTTGCTATCCAGCAAAAGGGCGAGTTACCAAAGTGCCCCAAACTCTCGCTTTCTCTTAATATATATGCATATTGTGCTTATGGGCTCCTTCAGGTTATATTGTTGCCTTTGTTGATTCATGCCTATAGAACCACCTGTCGAGTTGGTAACGCAAGGAAGCAAGATCGTGCTTGGTGCTGCTGAGAGGTGAGAATCAGGGAATGAAATTTCTTTGTTCACTACAATTCATTTTTATTTCAGTTTTCCAGAAATTTCTGGAGATTATGGATTCTGAAAGAAAAATAATTTAAACTAATAGAACTATTATGGTTGAAGAGTGAATTCAGTCTATTGATCCTCTTCTTCTTCCCTTCCTCCTATTAGGAGTACTATTTGGAATACATAGGGAAATACAGCTTTTGATATTTGATTTGTAGATCTGGCCATTGACTCTGAAATTCAGAGAGGTTCTCTGTAAGCTTGTTGTTCCATTCCAAGAACAAGGAGGTTGAAAGATATTGGTGGGAAGTGGTGGAAGCATTCTTGATCAGTTTCTTACATTGAGAAATTCTACTCTTTCATTGATAGTTTACGATATGTTTATTGTATATATATACTTAACATGATGGCTTAAATGACAAGACGTTTTCTTAATAAATTTGTTGTATGGTAACTTCTCACTTATAAATTTCTTTGTAGCAGGACACAGTGAGATTTTACTGGTTAACATGGATGTTCCATCGCAGGTGGTTAATAATTAGTACGTATCAGTTCTCTCTCTCTCTGTCTCTCTCTCTCTTTCATTCGTTTCTTGTATGACCATAGTTTGATGAGGTAACAAGGGCATGGACTTATGTTAGGATAATTACTCATTTGTTTATTTTTCCATTTTGAGGGAGAACTTCATAGGAAAAAAAGAACACAATGATCTAAAATCCGTTCGTTTGGGTTTGAACTACTTTTACTGGAATGTTATCTAATCAACTTCATCACTTTCTAGGTGTTTACCACTTAGCACTGACCGGTCATGGCACATATAATGTAACAGCCGAAGCCCACCGCTAGCAAATATTGTCCATTTCGGCCCTTTACGTATCGTTGTCAGCCTTATGGTTTTAAAACGCGTTTTCTAGGGAGAGGTTTCCACATTCTTATCAGAAATGTTTTGTTCCCCTCTCCAACCGATATGGGATCTCACAATCTACCCCCCTTGGGGGGCCAGCATCCTCGTTGGCACACTGCCTAGTGTCTGCCTCTGATACCATTTGTAACAGCCCAAACCCACCACTAGCAAATATTGTCCACTTTGGCCCGTTGCATATCGCCATCAGCCTCACGGTTTTATAAACGTGTGTGTTAGGGAGAGGTTTCCACACTCTTATCAGAAATGTTTTGTTCCCCTCTCCAACTGATGTGGGATCTCACGTATAAAAACCAAACTCCCTAAATACTGGGCCAACTTTCTTTTAATGCTCCTTAACTACTACTTCTTCTTCCATTTTCCATTTTCTTCTTTGATGGAGTGACTAGTGAGATGAGTCTTAAAGGATGAACCATGAAGGCCTACAAAAATATTGACCTTCTTATTTGAACCTAACAAGTATTATATTATGACAGCTATACCCTCTTGTTTGTTTTCTATCAAACTCTAACAATAGGCTAGAATGGACACCTTGGCAAATGTCGAGAAGTAGGGGCTTCGGATCTTTAGATATAACATTGAAAGTCCGGGGATTAAGTCTAAGTTGACAAACTTCATTAGAGAAAAAGAGGGAAAAATTATATACCTATAGATCTATGCATTCACACATACATATGTCTTAATCTTCCTCAAAAAGTTTGTTGATTAACTACAGTGGCTTCTGTCTGGAGTCCAAATTATTCAACAATGATGGCCAGCTAAAAGGTGAAGGCTTCACTATTCCTTGTCAGCACCCTCTTACCTACCAGCCAGGTAGTCAGTTTCTTCTTGATTTTCTTATATGGGTTAATGTTCTTCCTGATTTTTCCTGATTTCATGTTTGCTTTCCCTCATAGTTCTACCAACTACTTCAAGAATGATTTCACTAAACGACATAACATAATATCATTTGATTTTCATCACATTACTTTGCCCTATGTAACTCTGTAATTTTGGTTGAGTAACAAAATTCTGAACTTCAAAGGCCACTTTTGAGTGGTAATAATTGTGTTCTTAATGGTAATATTTGTGTTCTGTTTGCGGAAGGTTGCAATGCAAGTAAGTCCATGACTGAAAATGTTTCACCACAGTCGGTATTGTTTACCAAGAAGATTTCTTTTCTGCAGAATGAATCGGTAACACCTCATCCCCTCTAATGATTTCCCTGCTTGCTTTTAAAACTTCAACTTTCCATGGATTTACTGCTTCTCCTGAAAAACTTTGTGTACTCCTTCAATCTTCTGGCCTAATAGCATGCAAAGAAACGCGAGTTCTTCGCCCAGAAAGGCGTACAAGCAGCCCCATATGATCTGGCAGGGGATAACAAGAGAATGAAGGTCAGTGCCTTTGATTAATATAAACAAGAACAAGAACAGCCTAAGGATGGGGTAGAGTGAACCCCTCCCAAACTTGTGCACTTTCATTTCTCTTTTATTACTTGTAGTTGCAGGAACCAGCAAGGAGAAGCCAAAGGCTTAGTGATAAAATTACTGCCCTTCAAAAGCTGGTTTCCCCTTACGGCAAGGTTGGTATTTTCTTTTCTTCTTAAAGTAGACTATAAAATAATATAAGAAGTAATTCCTTTTCTTAAACAGTATGTCATTTTTGTTAACTTATTGTAGACTGATACCGCATCTGTTCTTCAAGAAGCCTGTCTTTATATCAAATTCGTTCAAGAACACATTCAGGTACAGTTCACTGAGACACGAGCTTTCCCGTTACTTCCATAGTATAAGTTCTTGTCTCTTTAAAATCATTTCTGTGAGATCTCACATCGGTTGGGGAGGAGAACGAAGCATTCTTTATAAGAGTGTGGAAACCTCTCCCTAACAGACGCATTTTAAAAACTTTGAGGAGAATCTCGAAAGGGAAAGTCCAAATAGGACAATATCTGCTAGCGATAGGCTTAGAATATTACAATTTCAATCCAAGTATAACTCAGTAGACAAGACACGGGAAGAATATAAACTTTAAAGTTTATTGCTCAAGTATTTTTGTTGGTTAAAAAAGGTGGCTTGAAGCTTGAAATTCATAGCTTTTTTTTTTTCCTGGCTTTGGAGCAGAATCTACTTCAGATGCAGAGTAGCTCATACAAAAACCTAAATCCTCAGGTAAAACTGTAAAAAATCTTCAGCTTCTTATGGTGAAATTTCAAGAGGAAGAAACAATTGTAAAAATTACTGCTCCATTTAAGGTGGGTCTGTCTGAAACTTTATCTTTTCTTCAGGGAACTCAACAGAAGCAAGGAAATCTAAGAAGTGAAGGACTATGTGTGGTTCCTGTGACTTTTACCCAGAAAATAGCCCTCAATAAGGACATAAATTTGGTGTCCTGAATTCAGTATGATGTATCAGAACGACATGTCGGTTCACCAACCTTATTCTGTAGGCTAATTTCATGATGAATGAATTACTGCCGATCCTGCCATAATTATTATTATTGTAGTTTTAAATATAAATTAATTGAGTTATATTTATATAGTGAAAATAAAAAATAATAACCAATATAGAAAAAAACAGTCATAGTCGGTCGGAAAATCTTAAAAAATAATATTGAAATATAAATTGGAGTCCGTATAAAATTTTTAAAAAATTTCAAAAAATTAGGTTAATTGCCATAAAAGATGCATAAATTACAAAGTATATACTAAAAATGAATTTTATTTTTTATAAATCAAATCAGCCGAAACGATGCCCACCGCAAAAATTAGGTGGAACCAAATAATTGGTAGAATGTTTGGATTTTTAACCGTCTCGGTGACATTAGCAATCGCCCCCACCCCCTGGGTGATCCGCTACCACAAATTTATTATTTTATTATTAATTAATTATTATTATTATTGTAATTTATATTTATAATATTGGATTTTAATAATTAGCGTCGAATCTCTTTGCACAGCACAGCCCTCGTTTCCCATCCCATCGTCCTCCTCCCTTCACCCTCTCTTCTGTCTTCTTTATCAACTCGCTTCTGGTTGCCCTAATTTTTCTCAGCCTTTCTCGCCATTTCTTTCGTTTTCTCGCCCCCATTATTTTCTCGGCAAAATGGTGAGCGNTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTCCATTTATTTGTTAATTTGTTTCTTTAGTCTTCCTCTATTTGTTCATCTTTGTCGCTTTTCTGTTCGATCCGTGGAGTTCTTGGTTGGTTTGAAACGGAATCCTTGTAAATCGCTGCACCGATTGGTGGTTAATTTGTTTTTCCTTCTCGATGATCATTTTTGGTCCGCTTGTTTATTGTTTCAATGGCCATAGACTGTTGATTATGCTGAGATATTAGTGCTTGTTTTTTTTTTTTTTTTAAATATCGACTGCCATGCACTTGTAAGCGTGTGGGTAAAAGCATTGGCCACCGTTGATGTAACGATATATTATATTCTCGTACATTTGTTGCAATTTTCATTAGGACCTTGTAACTGTACTCTGTTCTCGAATTATAGTTATTTCAAGATTATGTAATAGAAAATTTGGACTGGTTCTTGTAAAAGAAGGATGCATGGGTCCAATTATTTTATCAATCTTTTAATTAATTTTGCAATTATTTTTTTCATTTTACTCATGGAAGGGGATAATCTCAGTGGTTTAAACACATGCATTTGTGTTGATGGATAATTAGTATCGTGATATTTTTCATTGCATGATCCTAAAGAGAGTTGATGAATCCATAAAATAAAAAATAAAAAAATTATAATTTGGTAAGCTAGGAATGCTTAATGATATAGTTTCAAGGGAAGAACTGAAGGATGTTGGATAAGGTAAGCATCAAATTAACTATTTAAGTAGAGGTTTATTAGCGGAGTAGTCCATCTCATATTTGTACATTTTGTCCTACGGTGCTTGTCACCACCATCACCATTAAATTCCTACATGAATTTAAGATATTCCACTTGGGGAGAGTCTATGAGTCGCCCTCTCCTCCCTCATCTTGTTCCTTCTTTGTTCTCTTCCATTATTTCTTAGTTTGTTTCTCCCTTATCACCATCACCATTAATGTGTGAATGTTGGGAAATGGGGATAGGAGGCTTGTTTGGCATAGACTAAAGAGTTGAGCATCAGAACTCGAAGGTGCGTTTCGATTAGAAATTAAAAGGCAGCAGCTTTAGAATTTCAGGTAGGAGCTGGTTAAAGTATGCCTTCTTCACATTAAAGGACAGGGTCAAGTTTTACCAAAGGTTGTGTTCATACTGTAATGTCTTTTTTAGGGCTTCCTTTAAAGAAGCTAGGATCTAAGCACTTTGTTAACTGAACTTTTTGCATCTGCGGTTCTGTGTTCAGACGATTCAATTTTAGGGCTTTCTTTCCCACTTTGTTATCTAAACCATCTTTTTTGAAAGGCCTTGGAGTAGGGAATATTGAATCGAAGAATGTGTTGCTGTTATGTTTTATCTCTAAGTAGCTTTGGATATTTTCAAGAGTAAATGACTTGTTATGTTAAGAATTTATTTGGCTCTTTACTCTCTCATGCTAGCAATATTTCTAGCAGTCCTTGGTTATAACACTGTCTAATGGAAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATACTTATAATTAACTCCGCTGCCTTATTGGCGATGTCATTTGTCTACAATAATTTATAATTACCTTCACTTCTCACTCTAGAGCTAGTTGGAGATGGACTTTTTCTTTCCATACTTCCTCCCCCAGGAAAAAGAATTAAGAAAAGAAGGAATCGGAAGTTGTTAAATCGTTTGGTGGAGTAATTGTATTATTTTGTTGTAGTTTAAAGATATGAAGCTTCACAGCCCCCAACACTATTTTCACACTCAAACCAGGTATCTGTTTATCAAATTTGAGCTGCATGGACGTATTTTCTAGCAAAGATGTGAACTCATTAGAGAAATGGGAAATTGGCCACTTTTCCTCCATCTTTATCTAGCTTGCACTGGACTTCTACTATGGTTGGGGTTCATGGGTGCCATGGGGATTTATGTTCTCTGAGTTCATAATTTATATTTGTAAATCAATCTTTCACAGGCAAATGCAGCATCCGGGATGGCTGTGCATGATGATTGCAAGCTTAGGTTTCTGGATTTGAAGGCCAAAAGAACCTTCCGTTTTATAGTATTCAAGATCGAAGAAAAATTGAAGCAGGTTGTGGTGGAAAAGCTTGGCGAGCCATCTCAAAGTTATGAGGACTTTGCTGCCAGCCTTCCTGCCGATGAATGCCGATACGCAGTCTATGATTTCGACTTTGTGACTGAAGAGAATTGCCAAAAGAGCAGGATTATATTCATTGCATGGTAAATGTACCACACAGCCTTCGCTCTCATTTTTGAAACGGGTTCTTTCATTTTGTGAACATGCATTCTAACTCATGATTCATCAATTGTATTAAGGTCTCCTGATACATCAAAGGTGAGAAGCAAGATGATTTACGCAAGTTCCAAGGACAGATTCAAGAGGGAGTTGGATGGCATCCAAGTGGAGTTGCAAGCAACTGATCCTACCGAGATGGGGCTTGACGTTATTAGAAGTCGGTCGGGGTCGGGTTAAGTCATTGTGATGCCAGAGCTGGTGGTGTTCATAGATTGTGGGCTCCAAACTTGCCTTTTATGATGCTATATGATAATATTGGCTTGTTCTTAAGAGGTTTTACCTAAGATTTTGAAGGATGACTGTTCTTTGGGTTTGGTGGATTTTAGTTGGATGGATATTTATGATATGCACAGGGTAAATATGGATCAATGCCAGTTTGGTTCTATCAGGATAACCGCTCGGAACAATTTTCAATGATTTTCGAGTTTATTAGGTTCCATTCCTTTCTACACAAATCTCCTTGTGGTTTCATCTTCGTTTCATGACCCAATTAAATTGTGACCAAGGTTTGCTGTAAAGCACCCGCTTGTGCTTTTTGGGAGACAATAATTCACCTTATGGGATATTTTTAAATGCATTACTGCTAGCAATTATTTTGACTAAG

mRNA sequence

ATCTTGCTCCCTTCGAAGAGAAGACAACCAGAAGCTTATTGTCTTTTGATGGACAGAAAAATGTTATATTGTTGCCTTTGTTGATTCATGCCTATAGAACCACCTGTCGAGTTGGTAACGCAAGGAAGCAAGATCGTGCTTGGTGCTGCTGAGAGTGGCTTCTGTCTGGAGTCCAAATTATTCAACAATGATGGCCAGCTAAAAGGTGAAGGCTTCACTATTCCTTGTCAGCACCCTCTTACCTACCAGCCAGGTTGCAATGCAAGTAAGTCCATGACTGAAAATGTTTCACCACAGTCGGTATTGTTTACCAAGAAGATTTCTTTTCTGCAGAATGAATCGCATGCAAAGAAACGCGAGTTCTTCGCCCAGAAAGGCGTACAAGCAGCCCCATATGATCTGGCAGGGGATAACAAGAGAATGAAGTTGCAGGAACCAGCAAGGAGAAGCCAAAGGCTTAGTGATAAAATTACTGCCCTTCAAAAGCTGGTTTCCCCTTACGGCAAGACTGATACCGCATCTGTTCTTCAAGAAGCCTGTCTTTATATCAAATTCGTTCAAGAACACATTCAGAATCTACTTCAGATGCAGAGTAGCTCATACAAAAACCTAAATCCTCAGGGAACTCAACAGAAGCAAGGAAATCTAAGAAGTGAAGGACTATGTGTGGTTCCTGTGACTTTTACCCAGAAAATAGCCCTCAATAAGGACATAAATTTGGCAAATGCAGCATCCGGGATGGCTGTGCATGATGATTGCAAGCTTAGGTTTCTGGATTTGAAGGCCAAAAGAACCTTCCGTTTTATAGTATTCAAGATCGAAGAAAAATTGAAGCAGGTTGTGGTGGAAAAGCTTGGCGAGCCATCTCAAAGTTATGAGGACTTTGCTGCCAGCCTTCCTGCCGATGAATGCCGATACGCAGTCTATGATTTCGACTTTGTGACTGAAGAGAATTGCCAAAAGAGCAGGATTATATTCATTGCATGGTCTCCTGATACATCAAAGGTGAGAAGCAAGATGATTTACGCAAGTTCCAAGGACAGATTCAAGAGGGAGTTGGATGGCATCCAAGTGGAGTTGCAAGCAACTGATCCTACCGAGATGGGGCTTGACGTTATTAGAAGTCGGTCGGGGTCGGGTTAAGTCATTGTGATGCCAGAGCTGGTGGTGTTCATAGATTGTGGGCTCCAAACTTGCCTTTTATGATGCTATATGATAATATTGGCTTGTTCTTAAGAGGTTTTACCTAAGATTTTGAAGGATGACTGTTCTTTGGGTTTGGTGGATTTTAGTTGGATGGATATTTATGATATGCACAGGGTAAATATGGATCAATGCCAGTTTGGTTCTATCAGGATAACCGCTCGGAACAATTTTCAATGATTTTCGAGTTTATTAGGTTCCATTCCTTTCTACACAAATCTCCTTGTGGTTTCATCTTCGTTTCATGACCCAATTAAATTGTGACCAAGGTTTGCTGTAAAGCACCCGCTTGTGCTTTTTGGGAGACAATAATTCACCTTATGGGATATTTTTAAATGCATTACTGCTAGCAATTATTTTGACTAAG

Coding sequence (CDS)

ATGCCTATAGAACCACCTGTCGAGTTGGTAACGCAAGGAAGCAAGATCGTGCTTGGTGCTGCTGAGAGTGGCTTCTGTCTGGAGTCCAAATTATTCAACAATGATGGCCAGCTAAAAGGTGAAGGCTTCACTATTCCTTGTCAGCACCCTCTTACCTACCAGCCAGGTTGCAATGCAAGTAAGTCCATGACTGAAAATGTTTCACCACAGTCGGTATTGTTTACCAAGAAGATTTCTTTTCTGCAGAATGAATCGCATGCAAAGAAACGCGAGTTCTTCGCCCAGAAAGGCGTACAAGCAGCCCCATATGATCTGGCAGGGGATAACAAGAGAATGAAGTTGCAGGAACCAGCAAGGAGAAGCCAAAGGCTTAGTGATAAAATTACTGCCCTTCAAAAGCTGGTTTCCCCTTACGGCAAGACTGATACCGCATCTGTTCTTCAAGAAGCCTGTCTTTATATCAAATTCGTTCAAGAACACATTCAGAATCTACTTCAGATGCAGAGTAGCTCATACAAAAACCTAAATCCTCAGGGAACTCAACAGAAGCAAGGAAATCTAAGAAGTGAAGGACTATGTGTGGTTCCTGTGACTTTTACCCAGAAAATAGCCCTCAATAAGGACATAAATTTGGCAAATGCAGCATCCGGGATGGCTGTGCATGATGATTGCAAGCTTAGGTTTCTGGATTTGAAGGCCAAAAGAACCTTCCGTTTTATAGTATTCAAGATCGAAGAAAAATTGAAGCAGGTTGTGGTGGAAAAGCTTGGCGAGCCATCTCAAAGTTATGAGGACTTTGCTGCCAGCCTTCCTGCCGATGAATGCCGATACGCAGTCTATGATTTCGACTTTGTGACTGAAGAGAATTGCCAAAAGAGCAGGATTATATTCATTGCATGGTCTCCTGATACATCAAAGGTGAGAAGCAAGATGATTTACGCAAGTTCCAAGGACAGATTCAAGAGGGAGTTGGATGGCATCCAAGTGGAGTTGCAAGCAACTGATCCTACCGAGATGGGGCTTGACGTTATTAGAAGTCGGTCGGGGTCGGGTTAA

Protein sequence

MPIEPPVELVTQGSKIVLGAAESGFCLESKLFNNDGQLKGEGFTIPCQHPLTYQPGCNASKSMTENVSPQSVLFTKKISFLQNESHAKKREFFAQKGVQAAPYDLAGDNKRMKLQEPARRSQRLSDKITALQKLVSPYGKTDTASVLQEACLYIKFVQEHIQNLLQMQSSSYKNLNPQGTQQKQGNLRSEGLCVVPVTFTQKIALNKDINLANAASGMAVHDDCKLRFLDLKAKRTFRFIVFKIEEKLKQVVVEKLGEPSQSYEDFAASLPADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVIRSRSGSG
Homology
[Close]
BLAST of Cp4.1LG13g09700 vs. ExPASy Swiss-Prot
Match: Q9FVI1 (Actin-depolymerizing factor 2 OS=Petunia hybrida OX=4102 GN=ADF2 PE=2 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 3.4e-64
Identity = 119/139 (85.61%), Postives = 133/139 (95.68%), Query Frame = 0 

Query: 211 LANAASGMAVHDDCKLRFLDLKAKRTFRFIVFKIEEKLKQVVVEKLGEPSQSYEDFAASL 270
           +ANAASGMAVHDDCKL+FL+LKAKRT+RFI++KIEEK K+VVVEKLGEP++SYEDF A L
Sbjct: 1   MANAASGMAVHDDCKLKFLELKAKRTYRFIIYKIEEKQKEVVVEKLGEPTESYEDFTAGL 60

Query: 271 PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 330
           PADECRYAVYDFDF+T+EN QKSRI FIAWSPDT++VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAVYDFDFMTKENHQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVE 120

Query: 331 LQATDPTEMGLDVIRSRSG 350
           LQATDPTEMGLDV RSR+G
Sbjct: 121 LQATDPTEMGLDVFRSRAG 139

[Close]
BLAST of Cp4.1LG13g09700 vs. ExPASy Swiss-Prot
Match: Q9FVI2 (Actin-depolymerizing factor 1 OS=Petunia hybrida OX=4102 GN=ADF1 PE=2 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 9.9e-64
Identity = 120/138 (86.96%), Postives = 131/138 (94.93%), Query Frame = 0 

Query: 211 LANAASGMAVHDDCKLRFLDLKAKRTFRFIVFKIEEKLKQVVVEKLGEPSQSYEDFAASL 270
           +ANAASGMAVHDDCKLRFL+LKAKRT RFIV+KIEEK KQVVVEK+GEP++SYEDFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKIGEPTESYEDFAASL 60

Query: 271 PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 330
           P +ECRYAVYDFDFVT ENCQKSRI FIAW PDT++VRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PENECRYAVYDFDFVTAENCQKSRIFFIAWCPDTARVRSKMIYASSKDRFKRELDGIQVE 120

Query: 331 LQATDPTEMGLDVIRSRS 349
           LQA DPTEMGLDVI+SR+
Sbjct: 121 LQACDPTEMGLDVIQSRA 138

[Close]
BLAST of Cp4.1LG13g09700 vs. ExPASy Swiss-Prot
Match: Q9ZSK3 (Actin-depolymerizing factor 4 OS=Arabidopsis thaliana OX=3702 GN=ADF4 PE=1 SV=2)

HSP 1 Score: 241.1 bits (614), Expect = 1.9e-62
Identity = 117/137 (85.40%), Postives = 128/137 (93.43%), Query Frame = 0 

Query: 211 LANAASGMAVHDDCKLRFLDLKAKRTFRFIVFKIEEKLKQVVVEKLGEPSQSYEDFAASL 270
           +ANAASGMAVHDDCKLRFL+LKAKRT RFIV+KIEEK KQV+VEK+GEP  +YEDFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60

Query: 271 PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 330
           PADECRYA+YDFDFVT ENCQKS+I FIAW PD +KVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 331 LQATDPTEMGLDVIRSR 348
           LQATDPTEM LDV++SR
Sbjct: 121 LQATDPTEMDLDVLKSR 137

[Close]
BLAST of Cp4.1LG13g09700 vs. ExPASy Swiss-Prot
Match: Q39250 (Actin-depolymerizing factor 1 OS=Arabidopsis thaliana OX=3702 GN=ADF1 PE=1 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 4.1e-62
Identity = 117/138 (84.78%), Postives = 128/138 (92.75%), Query Frame = 0 

Query: 211 LANAASGMAVHDDCKLRFLDLKAKRTFRFIVFKIEEKLKQVVVEKLGEPSQSYEDFAASL 270
           +ANAASGMAVHDDCKLRFL+LKAKRT RFIV+KIEEK KQVVVEK+G+P Q+YE+FAA L
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACL 60

Query: 271 PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 330
           PADECRYA+YDFDFVT ENCQKS+I FIAW PD +KVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 331 LQATDPTEMGLDVIRSRS 349
           LQATDPTEM LDV RSR+
Sbjct: 121 LQATDPTEMDLDVFRSRA 138

[Close]
BLAST of Cp4.1LG13g09700 vs. ExPASy Swiss-Prot
Match: Q39251 (Actin-depolymerizing factor 2 OS=Arabidopsis thaliana OX=3702 GN=ADF2 PE=1 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 1.6e-61
Identity = 115/138 (83.33%), Postives = 129/138 (93.48%), Query Frame = 0 

Query: 211 LANAASGMAVHDDCKLRFLDLKAKRTFRFIVFKIEEKLKQVVVEKLGEPSQSYEDFAASL 270
           +ANAASGMAVHDDCKL+F++LKAKRTFR IV+KIE+  KQV+VEKLGEP QSY+DFAASL
Sbjct: 1   MANAASGMAVHDDCKLKFMELKAKRTFRTIVYKIED--KQVIVEKLGEPEQSYDDFAASL 60

Query: 271 PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 330
           PAD+CRY +YDFDFVT ENCQKS+I FIAWSPDT+KVR KMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADDCRYCIYDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVE 120

Query: 331 LQATDPTEMGLDVIRSRS 349
           LQATDPTEMGLDV +SR+
Sbjct: 121 LQATDPTEMGLDVFKSRT 136

[Close]
BLAST of Cp4.1LG13g09700 vs. NCBI nr
Match: KAG6578716.1 (Transcription factor basic helix-loop-helix 154, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 399 bits (1024), Expect = 3.29e-137
Identity = 203/215 (94.42%), Postives = 207/215 (96.28%), Query Frame = 0 

Query: 1   MPIEPPVELVTQGSKIVLGAAES--GFCLESKLFNNDGQLKGEGFTIPCQHPLTYQPGCN 60
           MPIEPPVELVTQ S++VLGAAE   GFCLESKLFNNDGQLKGEGFTIPCQHP+TYQPGCN
Sbjct: 1   MPIEPPVELVTQESELVLGAAERTHGFCLESKLFNNDGQLKGEGFTIPCQHPITYQPGCN 60

Query: 61  ASKSMTENVSPQSVLFTKKISFLQNESHAKKREFFAQKGVQAAPYDLAGDNKRMKLQEPA 120
           AS SMTENVSPQSV FTKKISFLQNESHAKKREFFAQKGVQAAPYDLAGDNKRMKLQEP 
Sbjct: 61  ASNSMTENVSPQSVWFTKKISFLQNESHAKKREFFAQKGVQAAPYDLAGDNKRMKLQEPV 120

Query: 121 RRSQRLSDKITALQKLVSPYGKTDTASVLQEACLYIKFVQEHIQNLLQMQSSSYKNLNPQ 180
           RRSQRLSDKITALQKLVSPYGKTDTASVLQEACLYIKFVQEHIQNLLQMQSSSYKNLNPQ
Sbjct: 121 RRSQRLSDKITALQKLVSPYGKTDTASVLQEACLYIKFVQEHIQNLLQMQSSSYKNLNPQ 180

Query: 181 GTQQKQGNLRSEGLCVVPVTFTQKIALNKDINLAN 213
           GTQQKQGNLRSEGLCVVPVTFTQKIALNKDINL +
Sbjct: 181 GTQQKQGNLRSEGLCVVPVTFTQKIALNKDINLVS 215

[Close]
BLAST of Cp4.1LG13g09700 vs. NCBI nr
Match: XP_023550777.1 (transcription factor bHLH112-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023550778.1 transcription factor bHLH112-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 375 bits (962), Expect = 5.36e-128
Identity = 188/190 (98.95%), Postives = 189/190 (99.47%), Query Frame = 0 

Query: 24  GFCLESKLFNNDGQLKGEGFTIPCQHPLTYQPGCNASKSMTENVSPQSVLFTKKISFLQN 83
           GFCLESKLFNNDGQLKGEGFTIPCQHPLTYQPGCNASKSMTENVSPQSVLFTKKISFLQN
Sbjct: 12  GFCLESKLFNNDGQLKGEGFTIPCQHPLTYQPGCNASKSMTENVSPQSVLFTKKISFLQN 71

Query: 84  ESHAKKREFFAQKGVQAAPYDLAGDNKRMKLQEPARRSQRLSDKITALQKLVSPYGKTDT 143
           ESHAKKREFFAQKGVQAAPYDLAGDNKRMKLQEPARRSQRLSDKITALQKLVSPYGKTDT
Sbjct: 72  ESHAKKREFFAQKGVQAAPYDLAGDNKRMKLQEPARRSQRLSDKITALQKLVSPYGKTDT 131

Query: 144 ASVLQEACLYIKFVQEHIQNLLQMQSSSYKNLNPQGTQQKQGNLRSEGLCVVPVTFTQKI 203
           ASVLQEACLYIKFVQEHIQNLLQMQSSSYKNLNPQGTQQKQGNLRSEGLCVVPVTFTQKI
Sbjct: 132 ASVLQEACLYIKFVQEHIQNLLQMQSSSYKNLNPQGTQQKQGNLRSEGLCVVPVTFTQKI 191

Query: 204 ALNKDINLAN 213
           ALNKDINL +
Sbjct: 192 ALNKDINLVS 201

[Close]
BLAST of Cp4.1LG13g09700 vs. NCBI nr
Match: XP_023550779.1 (transcription factor bHLH112-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 367 bits (941), Expect = 7.78e-125
Identity = 186/190 (97.89%), Postives = 187/190 (98.42%), Query Frame = 0 

Query: 24  GFCLESKLFNNDGQLKGEGFTIPCQHPLTYQPGCNASKSMTENVSPQSVLFTKKISFLQN 83
           GFCLESKLFNNDGQLKGEGFTIPCQHPLTYQPGCNASKSMTENVSPQSVLFTKKISFLQN
Sbjct: 12  GFCLESKLFNNDGQLKGEGFTIPCQHPLTYQPGCNASKSMTENVSPQSVLFTKKISFLQN 71

Query: 84  ESHAKKREFFAQKGVQAAPYDLAGDNKRMKLQEPARRSQRLSDKITALQKLVSPYGKTDT 143
           ESHAKKREFFAQKGVQAAPYDLAGDNKRMK  EPARRSQRLSDKITALQKLVSPYGKTDT
Sbjct: 72  ESHAKKREFFAQKGVQAAPYDLAGDNKRMK--EPARRSQRLSDKITALQKLVSPYGKTDT 131

Query: 144 ASVLQEACLYIKFVQEHIQNLLQMQSSSYKNLNPQGTQQKQGNLRSEGLCVVPVTFTQKI 203
           ASVLQEACLYIKFVQEHIQNLLQMQSSSYKNLNPQGTQQKQGNLRSEGLCVVPVTFTQKI
Sbjct: 132 ASVLQEACLYIKFVQEHIQNLLQMQSSSYKNLNPQGTQQKQGNLRSEGLCVVPVTFTQKI 191

Query: 204 ALNKDINLAN 213
           ALNKDINL +
Sbjct: 192 ALNKDINLVS 199

[Close]
BLAST of Cp4.1LG13g09700 vs. NCBI nr
Match: XP_022993169.1 (transcription factor bHLH112-like isoform X1 [Cucurbita maxima] >XP_022993170.1 transcription factor bHLH112-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 364 bits (934), Expect = 9.68e-124
Identity = 182/190 (95.79%), Postives = 185/190 (97.37%), Query Frame = 0 

Query: 24  GFCLESKLFNNDGQLKGEGFTIPCQHPLTYQPGCNASKSMTENVSPQSVLFTKKISFLQN 83
           GFCLESKLFNNDGQLKGEGFTIPCQHP+TYQPGCNASKS +ENVSPQSVLF KKISFLQN
Sbjct: 12  GFCLESKLFNNDGQLKGEGFTIPCQHPITYQPGCNASKSRSENVSPQSVLFPKKISFLQN 71

Query: 84  ESHAKKREFFAQKGVQAAPYDLAGDNKRMKLQEPARRSQRLSDKITALQKLVSPYGKTDT 143
           ESHAKKREFFAQKGVQAAPYDLAGDNKRMKLQEP RRSQRLSDKITALQKLVSPYGKTDT
Sbjct: 72  ESHAKKREFFAQKGVQAAPYDLAGDNKRMKLQEPVRRSQRLSDKITALQKLVSPYGKTDT 131

Query: 144 ASVLQEACLYIKFVQEHIQNLLQMQSSSYKNLNPQGTQQKQGNLRSEGLCVVPVTFTQKI 203
           ASVLQEACLYIKFVQEHIQNLLQMQSSSYKNLNPQG QQKQGNLRSEGLCVVPVTFTQKI
Sbjct: 132 ASVLQEACLYIKFVQEHIQNLLQMQSSSYKNLNPQGIQQKQGNLRSEGLCVVPVTFTQKI 191

Query: 204 ALNKDINLAN 213
           ALNKDINL +
Sbjct: 192 ALNKDINLVS 201

[Close]
BLAST of Cp4.1LG13g09700 vs. NCBI nr
Match: XP_022938584.1 (transcription factor bHLH112-like isoform X1 [Cucurbita moschata] >XP_022938585.1 transcription factor bHLH112-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 361 bits (927), Expect = 1.12e-122
Identity = 180/190 (94.74%), Postives = 185/190 (97.37%), Query Frame = 0 

Query: 24  GFCLESKLFNNDGQLKGEGFTIPCQHPLTYQPGCNASKSMTENVSPQSVLFTKKISFLQN 83
           GFCLESKLFNNDGQLKGEGFTIPCQHP+TYQPGCNAS SMTENVSPQSVLF KKISF QN
Sbjct: 12  GFCLESKLFNNDGQLKGEGFTIPCQHPITYQPGCNASNSMTENVSPQSVLFPKKISFPQN 71

Query: 84  ESHAKKREFFAQKGVQAAPYDLAGDNKRMKLQEPARRSQRLSDKITALQKLVSPYGKTDT 143
           ESHAKKREFFAQKGVQAAPYDLAGDNKRMKLQEP RRSQRLSDKITALQKLVSPYGKTDT
Sbjct: 72  ESHAKKREFFAQKGVQAAPYDLAGDNKRMKLQEPVRRSQRLSDKITALQKLVSPYGKTDT 131

Query: 144 ASVLQEACLYIKFVQEHIQNLLQMQSSSYKNLNPQGTQQKQGNLRSEGLCVVPVTFTQKI 203
           ASVLQEACLYIKFVQEHIQNLLQMQSS+YKNLNPQGTQQ+QGNLRSEGLCVVPVTFTQKI
Sbjct: 132 ASVLQEACLYIKFVQEHIQNLLQMQSSAYKNLNPQGTQQRQGNLRSEGLCVVPVTFTQKI 191

Query: 204 ALNKDINLAN 213
           AL+KDINL +
Sbjct: 192 ALDKDINLVS 201

[Close]
BLAST of Cp4.1LG13g09700 vs. ExPASy TrEMBL
Match: A0A6J1JZG5 (transcription factor bHLH112-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489269 PE=4 SV=1)

HSP 1 Score: 364 bits (934), Expect = 4.68e-124
Identity = 182/190 (95.79%), Postives = 185/190 (97.37%), Query Frame = 0 

Query: 24  GFCLESKLFNNDGQLKGEGFTIPCQHPLTYQPGCNASKSMTENVSPQSVLFTKKISFLQN 83
           GFCLESKLFNNDGQLKGEGFTIPCQHP+TYQPGCNASKS +ENVSPQSVLF KKISFLQN
Sbjct: 12  GFCLESKLFNNDGQLKGEGFTIPCQHPITYQPGCNASKSRSENVSPQSVLFPKKISFLQN 71

Query: 84  ESHAKKREFFAQKGVQAAPYDLAGDNKRMKLQEPARRSQRLSDKITALQKLVSPYGKTDT 143
           ESHAKKREFFAQKGVQAAPYDLAGDNKRMKLQEP RRSQRLSDKITALQKLVSPYGKTDT
Sbjct: 72  ESHAKKREFFAQKGVQAAPYDLAGDNKRMKLQEPVRRSQRLSDKITALQKLVSPYGKTDT 131

Query: 144 ASVLQEACLYIKFVQEHIQNLLQMQSSSYKNLNPQGTQQKQGNLRSEGLCVVPVTFTQKI 203
           ASVLQEACLYIKFVQEHIQNLLQMQSSSYKNLNPQG QQKQGNLRSEGLCVVPVTFTQKI
Sbjct: 132 ASVLQEACLYIKFVQEHIQNLLQMQSSSYKNLNPQGIQQKQGNLRSEGLCVVPVTFTQKI 191

Query: 204 ALNKDINLAN 213
           ALNKDINL +
Sbjct: 192 ALNKDINLVS 201

[Close]
BLAST of Cp4.1LG13g09700 vs. ExPASy TrEMBL
Match: A0A6J1FEH8 (transcription factor bHLH112-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444774 PE=4 SV=1)

HSP 1 Score: 361 bits (927), Expect = 5.43e-123
Identity = 180/190 (94.74%), Postives = 185/190 (97.37%), Query Frame = 0 

Query: 24  GFCLESKLFNNDGQLKGEGFTIPCQHPLTYQPGCNASKSMTENVSPQSVLFTKKISFLQN 83
           GFCLESKLFNNDGQLKGEGFTIPCQHP+TYQPGCNAS SMTENVSPQSVLF KKISF QN
Sbjct: 12  GFCLESKLFNNDGQLKGEGFTIPCQHPITYQPGCNASNSMTENVSPQSVLFPKKISFPQN 71

Query: 84  ESHAKKREFFAQKGVQAAPYDLAGDNKRMKLQEPARRSQRLSDKITALQKLVSPYGKTDT 143
           ESHAKKREFFAQKGVQAAPYDLAGDNKRMKLQEP RRSQRLSDKITALQKLVSPYGKTDT
Sbjct: 72  ESHAKKREFFAQKGVQAAPYDLAGDNKRMKLQEPVRRSQRLSDKITALQKLVSPYGKTDT 131

Query: 144 ASVLQEACLYIKFVQEHIQNLLQMQSSSYKNLNPQGTQQKQGNLRSEGLCVVPVTFTQKI 203
           ASVLQEACLYIKFVQEHIQNLLQMQSS+YKNLNPQGTQQ+QGNLRSEGLCVVPVTFTQKI
Sbjct: 132 ASVLQEACLYIKFVQEHIQNLLQMQSSAYKNLNPQGTQQRQGNLRSEGLCVVPVTFTQKI 191

Query: 204 ALNKDINLAN 213
           AL+KDINL +
Sbjct: 192 ALDKDINLVS 201

[Close]
BLAST of Cp4.1LG13g09700 vs. ExPASy TrEMBL
Match: A0A6J1JS15 (transcription factor bHLH112-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489269 PE=4 SV=1)

HSP 1 Score: 356 bits (913), Expect = 6.79e-121
Identity = 180/190 (94.74%), Postives = 183/190 (96.32%), Query Frame = 0 

Query: 24  GFCLESKLFNNDGQLKGEGFTIPCQHPLTYQPGCNASKSMTENVSPQSVLFTKKISFLQN 83
           GFCLESKLFNNDGQLKGEGFTIPCQHP+TYQPGCNASKS +ENVSPQSVLF KKISFLQN
Sbjct: 12  GFCLESKLFNNDGQLKGEGFTIPCQHPITYQPGCNASKSRSENVSPQSVLFPKKISFLQN 71

Query: 84  ESHAKKREFFAQKGVQAAPYDLAGDNKRMKLQEPARRSQRLSDKITALQKLVSPYGKTDT 143
           ESHAKKREFFAQKGVQAAPYDLAGDNKRMK  EP RRSQRLSDKITALQKLVSPYGKTDT
Sbjct: 72  ESHAKKREFFAQKGVQAAPYDLAGDNKRMK--EPVRRSQRLSDKITALQKLVSPYGKTDT 131

Query: 144 ASVLQEACLYIKFVQEHIQNLLQMQSSSYKNLNPQGTQQKQGNLRSEGLCVVPVTFTQKI 203
           ASVLQEACLYIKFVQEHIQNLLQMQSSSYKNLNPQG QQKQGNLRSEGLCVVPVTFTQKI
Sbjct: 132 ASVLQEACLYIKFVQEHIQNLLQMQSSSYKNLNPQGIQQKQGNLRSEGLCVVPVTFTQKI 191

Query: 204 ALNKDINLAN 213
           ALNKDINL +
Sbjct: 192 ALNKDINLVS 199

[Close]
BLAST of Cp4.1LG13g09700 vs. ExPASy TrEMBL
Match: A0A6J1FDK1 (transcription factor bHLH112-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444774 PE=4 SV=1)

HSP 1 Score: 353 bits (906), Expect = 7.86e-120
Identity = 178/190 (93.68%), Postives = 183/190 (96.32%), Query Frame = 0 

Query: 24  GFCLESKLFNNDGQLKGEGFTIPCQHPLTYQPGCNASKSMTENVSPQSVLFTKKISFLQN 83
           GFCLESKLFNNDGQLKGEGFTIPCQHP+TYQPGCNAS SMTENVSPQSVLF KKISF QN
Sbjct: 12  GFCLESKLFNNDGQLKGEGFTIPCQHPITYQPGCNASNSMTENVSPQSVLFPKKISFPQN 71

Query: 84  ESHAKKREFFAQKGVQAAPYDLAGDNKRMKLQEPARRSQRLSDKITALQKLVSPYGKTDT 143
           ESHAKKREFFAQKGVQAAPYDLAGDNKRMK  EP RRSQRLSDKITALQKLVSPYGKTDT
Sbjct: 72  ESHAKKREFFAQKGVQAAPYDLAGDNKRMK--EPVRRSQRLSDKITALQKLVSPYGKTDT 131

Query: 144 ASVLQEACLYIKFVQEHIQNLLQMQSSSYKNLNPQGTQQKQGNLRSEGLCVVPVTFTQKI 203
           ASVLQEACLYIKFVQEHIQNLLQMQSS+YKNLNPQGTQQ+QGNLRSEGLCVVPVTFTQKI
Sbjct: 132 ASVLQEACLYIKFVQEHIQNLLQMQSSAYKNLNPQGTQQRQGNLRSEGLCVVPVTFTQKI 191

Query: 204 ALNKDINLAN 213
           AL+KDINL +
Sbjct: 192 ALDKDINLVS 199

[Close]
BLAST of Cp4.1LG13g09700 vs. ExPASy TrEMBL
Match: A0A061FMX5 (Actin depolymerizing factor 4 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_042823 PE=3 SV=1)

HSP 1 Score: 354 bits (908), Expect = 4.17e-116
Identity = 227/437 (51.95%), Postives = 258/437 (59.04%), Query Frame = 0 

Query: 24  GFCLESKLFNNDGQLKGEGFTIPCQHPLT-----YQPGCNASKSMTENVSPQSVLFTKKI 83
           GF +ESK+FNND QL+   F IP Q         YQ G     S  +N   QS+  T K+
Sbjct: 42  GFSMESKIFNNDTQLRDGAFVIPYQSHFNSDLQDYQSG----SSNCDNNFQQSMPLTSKL 101

Query: 84  SFLQNESHAKKREFFAQKGV----------QAAPYDLAGDNKRMKLQE------------ 143
           +  Q E   +K +   ++ +           +A  +    NKR +L              
Sbjct: 102 ALPQFEQDIQKLQNGRKRPIVVNDQMPLNGTSALNEWKKKNKRKRLPSFEQQQSRQITEA 161

Query: 144 -----------PA-RRSQRLSDKITALQKLVSPYGKTDTASVLQEACLYIKFVQEHIQNL 203
                      PA RRSQ+LSDKITALQKLVSPYGKTDTASVLQEA LYIK +QE IQNL
Sbjct: 162 VTEIKQCRMHMPAVRRSQKLSDKITALQKLVSPYGKTDTASVLQEASLYIKLLQEQIQNL 221

Query: 204 LQMQSSSYKNL---NPQGTQQKQGNLRSEGLCVVPVTFTQKIAL---------------- 263
            QM SSSY +L   +PQ   +KQ +LRS GLC+VP++FTQK+                  
Sbjct: 222 FQMLSSSYNSLRAIHPQEIGKKQQDLRSRGLCLVPISFTQKVTKEDQKEKRESKEKRRKK 281

Query: 264 -NKDINL----------------------------------------------------- 323
            NK   L                                                     
Sbjct: 282 NNKSKRLGGHFQAVIANPKNREKKFIYTFLLPFRSLFFSEEALDFLGLFSLFSSLSRETM 341

Query: 324 ANAASGMAVHDDCKLRFLDLKAKRTFRFIVFKIEEKLKQVVVEKLGEPSQSYEDFAASLP 348
           ANAASGMAV DDCKL+FL+LKAKRT+RFIVFKIEEK KQVVVEKLGEP+ SYE F ASLP
Sbjct: 342 ANAASGMAVDDDCKLKFLELKAKRTYRFIVFKIEEKQKQVVVEKLGEPTDSYEAFTASLP 401

[Close]
BLAST of Cp4.1LG13g09700 vs. TAIR 10
Match: AT5G59890.1 (actin depolymerizing factor 4 )

HSP 1 Score: 241.1 bits (614), Expect = 1.3e-63
Identity = 117/137 (85.40%), Postives = 128/137 (93.43%), Query Frame = 0 

Query: 211 LANAASGMAVHDDCKLRFLDLKAKRTFRFIVFKIEEKLKQVVVEKLGEPSQSYEDFAASL 270
           +ANAASGMAVHDDCKLRFL+LKAKRT RFIV+KIEEK KQV+VEK+GEP  +YEDFAASL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60

Query: 271 PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 330
           PADECRYA+YDFDFVT ENCQKS+I FIAW PD +KVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 331 LQATDPTEMGLDVIRSR 348
           LQATDPTEM LDV++SR
Sbjct: 121 LQATDPTEMDLDVLKSR 137

[Close]
BLAST of Cp4.1LG13g09700 vs. TAIR 10
Match: AT3G46010.1 (actin depolymerizing factor 1 )

HSP 1 Score: 240.0 bits (611), Expect = 2.9e-63
Identity = 117/138 (84.78%), Postives = 128/138 (92.75%), Query Frame = 0 

Query: 211 LANAASGMAVHDDCKLRFLDLKAKRTFRFIVFKIEEKLKQVVVEKLGEPSQSYEDFAASL 270
           +ANAASGMAVHDDCKLRFL+LKAKRT RFIV+KIEEK KQVVVEK+G+P Q+YE+FAA L
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACL 60

Query: 271 PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 330
           PADECRYA+YDFDFVT ENCQKS+I FIAW PD +KVRSKMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 331 LQATDPTEMGLDVIRSRS 349
           LQATDPTEM LDV RSR+
Sbjct: 121 LQATDPTEMDLDVFRSRA 138

[Close]
BLAST of Cp4.1LG13g09700 vs. TAIR 10
Match: AT3G46010.2 (actin depolymerizing factor 1 )

HSP 1 Score: 239.2 bits (609), Expect = 5.0e-63
Identity = 117/137 (85.40%), Postives = 127/137 (92.70%), Query Frame = 0 

Query: 212 ANAASGMAVHDDCKLRFLDLKAKRTFRFIVFKIEEKLKQVVVEKLGEPSQSYEDFAASLP 271
           ANAASGMAVHDDCKLRFL+LKAKRT RFIV+KIEEK KQVVVEK+G+P Q+YE+FAA LP
Sbjct: 13  ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLP 72

Query: 272 ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVEL 331
           ADECRYA+YDFDFVT ENCQKS+I FIAW PD +KVRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 73  ADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVEL 132

Query: 332 QATDPTEMGLDVIRSRS 349
           QATDPTEM LDV RSR+
Sbjct: 133 QATDPTEMDLDVFRSRA 149

[Close]
BLAST of Cp4.1LG13g09700 vs. TAIR 10
Match: AT3G46000.1 (actin depolymerizing factor 2 )

HSP 1 Score: 238.0 bits (606), Expect = 1.1e-62
Identity = 115/138 (83.33%), Postives = 129/138 (93.48%), Query Frame = 0 

Query: 211 LANAASGMAVHDDCKLRFLDLKAKRTFRFIVFKIEEKLKQVVVEKLGEPSQSYEDFAASL 270
           +ANAASGMAVHDDCKL+F++LKAKRTFR IV+KIE+  KQV+VEKLGEP QSY+DFAASL
Sbjct: 1   MANAASGMAVHDDCKLKFMELKAKRTFRTIVYKIED--KQVIVEKLGEPEQSYDDFAASL 60

Query: 271 PADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVE 330
           PAD+CRY +YDFDFVT ENCQKS+I FIAWSPDT+KVR KMIYASSKDRFKRELDGIQVE
Sbjct: 61  PADDCRYCIYDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVE 120

Query: 331 LQATDPTEMGLDVIRSRS 349
           LQATDPTEMGLDV +SR+
Sbjct: 121 LQATDPTEMGLDVFKSRT 136

[Close]
BLAST of Cp4.1LG13g09700 vs. TAIR 10
Match: AT5G59890.2 (actin depolymerizing factor 4 )

HSP 1 Score: 229.2 bits (583), Expect = 5.2e-60
Identity = 111/130 (85.38%), Postives = 121/130 (93.08%), Query Frame = 0 

Query: 218 MAVHDDCKLRFLDLKAKRTFRFIVFKIEEKLKQVVVEKLGEPSQSYEDFAASLPADECRY 277
           MAVHDDCKLRFL+LKAKRT RFIV+KIEEK KQV+VEK+GEP  +YEDFAASLPADECRY
Sbjct: 1   MAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLPADECRY 60

Query: 278 AVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPT 337
           A+YDFDFVT ENCQKS+I FIAW PD +KVRSKMIYASSKDRFKRELDGIQVELQATDPT
Sbjct: 61  AIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVELQATDPT 120

Query: 338 EMGLDVIRSR 348
           EM LDV++SR
Sbjct: 121 EMDLDVLKSR 130

The following BLAST results are available for this feature:
BLAST of Cp4.1LG13g09700 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FVI13.4e-6485.61Actin-depolymerizing factor 2 OS=Petunia hybrida OX=4102 GN=ADF2 PE=2 SV=1[more]
Q9FVI29.9e-6486.96Actin-depolymerizing factor 1 OS=Petunia hybrida OX=4102 GN=ADF1 PE=2 SV=1[more]
Q9ZSK31.9e-6285.40Actin-depolymerizing factor 4 OS=Arabidopsis thaliana OX=3702 GN=ADF4 PE=1 SV=2[more]
Q392504.1e-6284.78Actin-depolymerizing factor 1 OS=Arabidopsis thaliana OX=3702 GN=ADF1 PE=1 SV=1[more]
Q392511.6e-6183.33Actin-depolymerizing factor 2 OS=Arabidopsis thaliana OX=3702 GN=ADF2 PE=1 SV=1[more]
BLAST of Cp4.1LG13g09700 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6578716.13.29e-13794.42Transcription factor basic helix-loop-helix 154, partial [Cucurbita argyrosperma... [more]
XP_023550777.15.36e-12898.95transcription factor bHLH112-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_02... [more]
XP_023550779.17.78e-12597.89transcription factor bHLH112-like isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_022993169.19.68e-12495.79transcription factor bHLH112-like isoform X1 [Cucurbita maxima] >XP_022993170.1 ... [more]
XP_022938584.11.12e-12294.74transcription factor bHLH112-like isoform X1 [Cucurbita moschata] >XP_022938585.... [more]
BLAST of Cp4.1LG13g09700 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JZG54.68e-12495.79transcription factor bHLH112-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1... [more]
A0A6J1FEH85.43e-12394.74transcription factor bHLH112-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LO... [more]
A0A6J1JS156.79e-12194.74transcription factor bHLH112-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1... [more]
A0A6J1FDK17.86e-12093.68transcription factor bHLH112-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LO... [more]
A0A061FMX54.17e-11651.95Actin depolymerizing factor 4 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_042823... [more]
BLAST of Cp4.1LG13g09700 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G59890.11.3e-6385.40actin depolymerizing factor 4 [more]
AT3G46010.12.9e-6384.78actin depolymerizing factor 1 [more]
AT3G46010.25.0e-6385.40actin depolymerizing factor 1 [more]
AT3G46000.11.1e-6283.33actin depolymerizing factor 2 [more]
AT5G59890.25.2e-6085.38actin depolymerizing factor 4 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 113..163
e-value: 4.5E-4
score: 29.5
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 108..157
score: 11.121621
IPR002108Actin-depolymerising factor homology domainSMARTSM00102adf_2coord: 222..349
e-value: 1.5E-57
score: 207.2
IPR002108Actin-depolymerising factor homology domainPFAMPF00241Cofilin_ADFcoord: 224..346
e-value: 1.1E-35
score: 122.1
IPR002108Actin-depolymerising factor homology domainPROSITEPS51263ADF_Hcoord: 215..349
score: 38.243454
IPR036638Helix-loop-helix DNA-binding domain superfamilyGENE3D4.10.280.10coord: 113..182
e-value: 3.0E-7
score: 32.5
IPR036638Helix-loop-helix DNA-binding domain superfamilySUPERFAMILY47459HLH, helix-loop-helix DNA-binding domaincoord: 119..167
IPR029006ADF-H/Gelsolin-like domain superfamilyGENE3D3.40.20.10Severincoord: 207..350
e-value: 2.9E-51
score: 175.4
IPR017904ADF/CofilinPANTHERPTHR11913COFILIN-RELATEDcoord: 109..205
coord: 210..348
IPR017904ADF/CofilinCDDcd11286ADF_cofilin_likecoord: 216..347
e-value: 2.6371E-67
score: 206.254
NoneNo IPR availablePANTHERPTHR11913:SF74ACTIN-DEPOLYMERIZING FACTOR 2-LIKEcoord: 109..205
coord: 210..348
NoneNo IPR availableCDDcd11393bHLH_AtbHLH_likecoord: 116..164
e-value: 1.32872E-15
score: 68.3619
NoneNo IPR availableSUPERFAMILY55753Actin depolymerizing proteinscoord: 212..347

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG13g09700.1Cp4.1LG13g09700.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030042 actin filament depolymerization
cellular_component GO:0015629 actin cytoskeleton
cellular_component GO:0005634 nucleus
molecular_function GO:0003779 actin binding
molecular_function GO:0046983 protein dimerization activity