Cp4.1LG13g08470 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG13g08470
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Calcium-binding EF-hand family protein
Location	Cp4.1LG13: 8015628 .. 8015960 (+)
RNA-Seq Expression	Cp4.1LG13g08470
Synteny	Cp4.1LG13g08470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATGGGTGATGGGGGAATTGGGGCTTTCGTGGGAGGAAGAGACGGAGGAATCGCTTCCTGTTGTTGGGTCGATGGAAGAGATGTGTAGGATTTTCGATCAAACGGCGGCGAGTGCGGCGGAGGTGAAGGAAGCTTTCGATGTGTTTGATGTTAATAGCGATGGGTTCATCGACGGTGATGAGTTGCAGAGAGTGCTATGCGTTTTGGGGTTCAAAGAAGGAGAGGCGATTCAGAATTGCAGGAGGATGATTAACAAGTTTGATGAGGACAACGATGGCAGAATTGATTTTCAGGAATTTGTTAAATTAATGGAGTCTGCTGTTTATTAA

mRNA sequence

ATGAAATGGGTGATGGGGGAATTGGGGCTTTCGTGGGAGGAAGAGACGGAGGAATCGCTTCCTGTTGTTGGGTCGATGGAAGAGATGTGTAGGATTTTCGATCAAACGGCGGCGAGTGCGGCGGAGGTGAAGGAAGCTTTCGATGTGTTTGATGTTAATAGCGATGGGTTCATCGACGGTGATGAGTTGCAGAGAGTGCTATGCGTTTTGGGGTTCAAAGAAGGAGAGGCGATTCAGAATTGCAGGAGGATGATTAACAAGTTTGATGAGGACAACGATGGCAGAATTGATTTTCAGGAATTTGTTAAATTAATGGAGTCTGCTGTTTATTAA

Coding sequence (CDS)

ATGAAATGGGTGATGGGGGAATTGGGGCTTTCGTGGGAGGAAGAGACGGAGGAATCGCTTCCTGTTGTTGGGTCGATGGAAGAGATGTGTAGGATTTTCGATCAAACGGCGGCGAGTGCGGCGGAGGTGAAGGAAGCTTTCGATGTGTTTGATGTTAATAGCGATGGGTTCATCGACGGTGATGAGTTGCAGAGAGTGCTATGCGTTTTGGGGTTCAAAGAAGGAGAGGCGATTCAGAATTGCAGGAGGATGATTAACAAGTTTGATGAGGACAACGATGGCAGAATTGATTTTCAGGAATTTGTTAAATTAATGGAGTCTGCTGTTTATTAA

Protein sequence

MKWVMGELGLSWEEETEESLPVVGSMEEMCRIFDQTAASAAEVKEAFDVFDVNSDGFIDGDELQRVLCVLGFKEGEAIQNCRRMINKFDEDNDGRIDFQEFVKLMESAVY

Homology

[Close]

BLAST of Cp4.1LG13g08470 vs. ExPASy Swiss-Prot
Match: Q93Z27 (Probable calcium-binding protein CML46 OS=Arabidopsis thaliana OX=3702 GN=CML46 PE=1 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 2.9e-22
Identity = 56/104 (53.85%), Postives = 70/104 (67.31%), Query Frame = 0


Query: 4   VMGELGLSWEEETEESLPVVGSMEEMCRIFDQTAASAAEVKEAFDVFDVNSDGFIDGDEL 63
           VM  LGLS ++E  E L    S +E+  +F++   S  EVK+AFDVFD N DGFID  +L
Sbjct: 99  VMKSLGLSTDQE-NEGLQKQYSSKEVSNLFEEKEPSLEEVKQAFDVFDENRDGFIDPIDL 158

Query: 64  QRVLCVLGFKEGEAIQNCRRMINKFDEDNDGRIDFQEFVKLMES 108
           QRVL +LG K+G  ++NCRRMI  FD   DGRIDF  FVK ME+
Sbjct: 159 QRVLTILGLKQGSNLENCRRMIRSFDGSKDGRIDFYGFVKFMEN 201

[Close]

BLAST of Cp4.1LG13g08470 vs. ExPASy Swiss-Prot
Match: Q9MBG5 (Probable calcium-binding protein CML45 OS=Arabidopsis thaliana OX=3702 GN=CML45 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.1e-21
Identity = 54/107 (50.47%), Postives = 70/107 (65.42%), Query Frame = 0


Query: 4   VMGELGLSWEEETEESLPVVGSMEEMCRIFDQTAASAAEVKEAFDVFDVNSDGFIDGDEL 63
           VM  LGL +    ++ L    S +E+  +F++  AS  EVK+AFDVFD N DGFID  EL
Sbjct: 91  VMRSLGLFY---NDDQLQEQYSAKEVSSLFEEKEASLEEVKQAFDVFDENKDGFIDAIEL 150

Query: 64  QRVLCVLGFKEGEAIQNCRRMINKFDEDNDGRIDFQEFVKLMESAVY 111
           QRVL +LGFK+G  + NC  MI   D + DG+IDF EFVK ME++ Y
Sbjct: 151 QRVLTILGFKQGSYLDNCLVMIRSLDGNKDGKIDFNEFVKFMETSFY 194

[Close]

BLAST of Cp4.1LG13g08470 vs. ExPASy Swiss-Prot
Match: Q0DZP5 (Probable calcium-binding protein CML17 OS=Oryza sativa subsp. japonica OX=39947 GN=CML17 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 6.5e-14
Identity = 36/70 (51.43%), Postives = 46/70 (65.71%), Query Frame = 0


Query: 41  AEVKEAFDVFDVNSDGFIDGDELQRVLCVLGFKEGEAIQNCRRMINKFDEDNDGRIDFQE 100
           A ++EAFDVFD N DGFI  DEL  VL  LG K+G   ++C RMI + D D DGR+DF E
Sbjct: 91  ASMREAFDVFDRNGDGFITVDELGAVLASLGIKQGRTAEDCGRMIGQVDRDGDGRVDFLE 150

Query: 101 FVKLMESAVY 111
           F ++M    +
Sbjct: 151 FKQMMRGGAF 160

[Close]

BLAST of Cp4.1LG13g08470 vs. ExPASy Swiss-Prot
Match: Q9LNE7 (Calmodulin-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=CML7 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 6.5e-14
Identity = 35/75 (46.67%), Postives = 53/75 (70.67%), Query Frame = 0


Query: 32  IFDQTAASAAEVKEAFDVFDVNSDGFIDGDELQRVLCVLGFKEGEAIQNCRRMINKFDED 91
           I D+      ++KEAF+VFD N DGFI  DEL+ VL  LG K+G+ + +C++MI K D D
Sbjct: 69  IMDEEDEEEEDMKEAFNVFDQNGDGFITVDELKAVLSSLGLKQGKTLDDCKKMIKKVDVD 128

Query: 92  NDGRIDFQEFVKLME 107
            DGR++++EF ++M+
Sbjct: 129 GDGRVNYKEFRQMMK 143

[Close]

BLAST of Cp4.1LG13g08470 vs. ExPASy Swiss-Prot
Match: Q9ZR02 (Calmodulin-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=CML6 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.1e-13
Identity = 35/83 (42.17%), Postives = 55/83 (66.27%), Query Frame = 0


Query: 24  GSMEEMCRIFDQTAASAAEVKEAFDVFDVNSDGFIDGDELQRVLCVLGFKEGEAIQNCRR 83
           G + +   + D+      ++KEAF+VFD N DGFI  DEL+ VL  LG K+G+ ++ CR+
Sbjct: 63  GELYKTIMVEDEDEVGEEDMKEAFNVFDRNGDGFITVDELKAVLSSLGLKQGKTLEECRK 122

Query: 84  MINKFDEDNDGRIDFQEFVKLME 107
           MI + D D DGR+++ EF ++M+
Sbjct: 123 MIMQVDVDGDGRVNYMEFRQMMK 145

[Close]

BLAST of Cp4.1LG13g08470 vs. NCBI nr
Match: KAG7016132.1 (putative calcium-binding protein CML45, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 210 bits (534), Expect = 3.23e-68
Identity = 105/110 (95.45%), Postives = 106/110 (96.36%), Query Frame = 0


Query: 1   MKWVMGELGLSWEEETEESLPVVGSMEEMCRIFDQTAASAAEVKEAFDVFDVNSDGFIDG 60
           MKWVMGELGLS EEETEESLP   SMEEMCRIFDQTAASAAEVKEAFDVFDVNSDGFIDG
Sbjct: 1   MKWVMGELGLSSEEETEESLPGFASMEEMCRIFDQTAASAAEVKEAFDVFDVNSDGFIDG 60

Query: 61  DELQRVLCVLGFKEGEAIQNCRRMINKFDEDNDGRIDFQEFVKLMESAVY 110
           DELQRVLCVLGFKEGEAIQNCRRMINKFDE+NDGRIDFQEFVKLMESAVY
Sbjct: 61  DELQRVLCVLGFKEGEAIQNCRRMINKFDENNDGRIDFQEFVKLMESAVY 110

[Close]

BLAST of Cp4.1LG13g08470 vs. NCBI nr
Match: XP_022939128.1 (probable calcium-binding protein CML45 [Cucurbita moschata])

HSP 1 Score: 210 bits (534), Expect = 2.71e-67
Identity = 105/110 (95.45%), Postives = 106/110 (96.36%), Query Frame = 0


Query: 1   MKWVMGELGLSWEEETEESLPVVGSMEEMCRIFDQTAASAAEVKEAFDVFDVNSDGFIDG 60
           MKWVMGELGLS EEETEESLP   SMEEMCRIFDQTAASAAEVKEAFDVFDVNSDGFIDG
Sbjct: 66  MKWVMGELGLSSEEETEESLPGFASMEEMCRIFDQTAASAAEVKEAFDVFDVNSDGFIDG 125

Query: 61  DELQRVLCVLGFKEGEAIQNCRRMINKFDEDNDGRIDFQEFVKLMESAVY 110
           DELQRVLCVLGFKEGEAIQNCRRMINKFDE+NDGRIDFQEFVKLMESAVY
Sbjct: 126 DELQRVLCVLGFKEGEAIQNCRRMINKFDENNDGRIDFQEFVKLMESAVY 175

[Close]

BLAST of Cp4.1LG13g08470 vs. NCBI nr
Match: KAG6578574.1 (putative calcium-binding protein CML46, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 210 bits (534), Expect = 2.71e-67
Identity = 105/110 (95.45%), Postives = 106/110 (96.36%), Query Frame = 0


Query: 1   MKWVMGELGLSWEEETEESLPVVGSMEEMCRIFDQTAASAAEVKEAFDVFDVNSDGFIDG 60
           MKWVMGELGLS EEETEESLP   SMEEMCRIFDQTAASAAEVKEAFDVFDVNSDGFIDG
Sbjct: 66  MKWVMGELGLSSEEETEESLPGFASMEEMCRIFDQTAASAAEVKEAFDVFDVNSDGFIDG 125

Query: 61  DELQRVLCVLGFKEGEAIQNCRRMINKFDEDNDGRIDFQEFVKLMESAVY 110
           DELQRVLCVLGFKEGEAIQNCRRMINKFDE+NDGRIDFQEFVKLMESAVY
Sbjct: 126 DELQRVLCVLGFKEGEAIQNCRRMINKFDENNDGRIDFQEFVKLMESAVY 175

[Close]

BLAST of Cp4.1LG13g08470 vs. NCBI nr
Match: XP_022993675.1 (probable calcium-binding protein CML30 [Cucurbita maxima])

HSP 1 Score: 203 bits (517), Expect = 1.05e-64
Identity = 101/110 (91.82%), Postives = 104/110 (94.55%), Query Frame = 0


Query: 1   MKWVMGELGLSWEEETEESLPVVGSMEEMCRIFDQTAASAAEVKEAFDVFDVNSDGFIDG 60
           MKWVM ELGLSW EETEESLP   SMEEMC+IFDQTAASAAEVKEAFDVFDVNSDGFID 
Sbjct: 66  MKWVMEELGLSWGEETEESLPGFASMEEMCKIFDQTAASAAEVKEAFDVFDVNSDGFIDV 125

Query: 61  DELQRVLCVLGFKEGEAIQNCRRMINKFDEDNDGRIDFQEFVKLMESAVY 110
           +ELQRVLCVLGFKEGEAIQNCRRMINKFDE+NDGRIDFQEFVKLMESAVY
Sbjct: 126 EELQRVLCVLGFKEGEAIQNCRRMINKFDENNDGRIDFQEFVKLMESAVY 175

[Close]

BLAST of Cp4.1LG13g08470 vs. NCBI nr
Match: XP_008459700.2 (PREDICTED: probable calcium-binding protein CML30 [Cucumis melo])

HSP 1 Score: 156 bits (394), Expect = 6.46e-46
Identity = 76/109 (69.72%), Postives = 92/109 (84.40%), Query Frame = 0


Query: 1   MKWVMGELGLSWEEETEESLPVVGSMEEMCRIFDQTAASAAEVKEAFDVFDVNSDGFIDG 60
           MKWVMG LG+   E +  S+P+ GS EE+  +FDQTAASAAEVK+AFDVFDVN+DGFID 
Sbjct: 75  MKWVMGNLGMDCSEGS--SVPLFGSAEEVAEMFDQTAASAAEVKQAFDVFDVNADGFIDV 134

Query: 61  DELQRVLCVLGFKEGEAIQNCRRMINKFDEDNDGRIDFQEFVKLMESAV 109
           +ELQRV+CVLGFKEGE I+NC +MI+KFD + DGRIDF+EFVKLME+ V
Sbjct: 135 EELQRVMCVLGFKEGEGIENCEKMISKFDYNKDGRIDFEEFVKLMEAVV 181

[Close]

BLAST of Cp4.1LG13g08470 vs. ExPASy TrEMBL
Match: A0A6J1FKT4 (probable calcium-binding protein CML45 OS=Cucurbita moschata OX=3662 GN=LOC111445127 PE=4 SV=1)

HSP 1 Score: 210 bits (534), Expect = 1.31e-67
Identity = 105/110 (95.45%), Postives = 106/110 (96.36%), Query Frame = 0


Query: 1   MKWVMGELGLSWEEETEESLPVVGSMEEMCRIFDQTAASAAEVKEAFDVFDVNSDGFIDG 60
           MKWVMGELGLS EEETEESLP   SMEEMCRIFDQTAASAAEVKEAFDVFDVNSDGFIDG
Sbjct: 66  MKWVMGELGLSSEEETEESLPGFASMEEMCRIFDQTAASAAEVKEAFDVFDVNSDGFIDG 125

Query: 61  DELQRVLCVLGFKEGEAIQNCRRMINKFDEDNDGRIDFQEFVKLMESAVY 110
           DELQRVLCVLGFKEGEAIQNCRRMINKFDE+NDGRIDFQEFVKLMESAVY
Sbjct: 126 DELQRVLCVLGFKEGEAIQNCRRMINKFDENNDGRIDFQEFVKLMESAVY 175

[Close]

BLAST of Cp4.1LG13g08470 vs. ExPASy TrEMBL
Match: A0A6J1JZ70 (probable calcium-binding protein CML30 OS=Cucurbita maxima OX=3661 GN=LOC111489598 PE=4 SV=1)

HSP 1 Score: 203 bits (517), Expect = 5.08e-65
Identity = 101/110 (91.82%), Postives = 104/110 (94.55%), Query Frame = 0


Query: 1   MKWVMGELGLSWEEETEESLPVVGSMEEMCRIFDQTAASAAEVKEAFDVFDVNSDGFIDG 60
           MKWVM ELGLSW EETEESLP   SMEEMC+IFDQTAASAAEVKEAFDVFDVNSDGFID 
Sbjct: 66  MKWVMEELGLSWGEETEESLPGFASMEEMCKIFDQTAASAAEVKEAFDVFDVNSDGFIDV 125

Query: 61  DELQRVLCVLGFKEGEAIQNCRRMINKFDEDNDGRIDFQEFVKLMESAVY 110
           +ELQRVLCVLGFKEGEAIQNCRRMINKFDE+NDGRIDFQEFVKLMESAVY
Sbjct: 126 EELQRVLCVLGFKEGEAIQNCRRMINKFDENNDGRIDFQEFVKLMESAVY 175

[Close]

BLAST of Cp4.1LG13g08470 vs. ExPASy TrEMBL
Match: A0A1S3CAB3 (probable calcium-binding protein CML30 OS=Cucumis melo OX=3656 GN=LOC103498740 PE=4 SV=1)

HSP 1 Score: 156 bits (394), Expect = 3.13e-46
Identity = 76/109 (69.72%), Postives = 92/109 (84.40%), Query Frame = 0


Query: 1   MKWVMGELGLSWEEETEESLPVVGSMEEMCRIFDQTAASAAEVKEAFDVFDVNSDGFIDG 60
           MKWVMG LG+   E +  S+P+ GS EE+  +FDQTAASAAEVK+AFDVFDVN+DGFID 
Sbjct: 75  MKWVMGNLGMDCSEGS--SVPLFGSAEEVAEMFDQTAASAAEVKQAFDVFDVNADGFIDV 134

Query: 61  DELQRVLCVLGFKEGEAIQNCRRMINKFDEDNDGRIDFQEFVKLMESAV 109
           +ELQRV+CVLGFKEGE I+NC +MI+KFD + DGRIDF+EFVKLME+ V
Sbjct: 135 EELQRVMCVLGFKEGEGIENCEKMISKFDYNKDGRIDFEEFVKLMEAVV 181

[Close]

BLAST of Cp4.1LG13g08470 vs. ExPASy TrEMBL
Match: A0A5A7T9C9 (Putative calcium-binding protein CML30 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002800 PE=4 SV=1)

HSP 1 Score: 155 bits (393), Expect = 3.38e-46
Identity = 76/109 (69.72%), Postives = 91/109 (83.49%), Query Frame = 0


Query: 1   MKWVMGELGLSWEEETEESLPVVGSMEEMCRIFDQTAASAAEVKEAFDVFDVNSDGFIDG 60
           MKWVMG LG+   E +  S+P+ GS EE+  +FDQTAASAAEVK+AFDVFDVN DGFID 
Sbjct: 66  MKWVMGNLGMDCSEGS--SVPLFGSAEEVAEMFDQTAASAAEVKQAFDVFDVNGDGFIDV 125

Query: 61  DELQRVLCVLGFKEGEAIQNCRRMINKFDEDNDGRIDFQEFVKLMESAV 109
           +ELQRV+CVLGFKEGE I+NC +MI+KFD + DGRIDF+EFVKLME+ V
Sbjct: 126 EELQRVMCVLGFKEGEGIENCEKMISKFDYNKDGRIDFEEFVKLMEAVV 172

[Close]

BLAST of Cp4.1LG13g08470 vs. ExPASy TrEMBL
Match: A0A0A0KS94 (Calcium ion binding protein OS=Cucumis sativus OX=3659 GN=Csa_5G636620 PE=4 SV=1)

HSP 1 Score: 152 bits (383), Expect = 1.42e-44
Identity = 74/109 (67.89%), Postives = 88/109 (80.73%), Query Frame = 0


Query: 1   MKWVMGELGLSWEEETEESLPVVGSMEEMCRIFDQTAASAAEVKEAFDVFDVNSDGFIDG 60
           MKWVMG LG+   E +  S+P+ GS EE+  +FDQTAAS AEVK+AF VFDVN DGFID 
Sbjct: 74  MKWVMGNLGIDCSEGS--SVPLFGSAEEVAEMFDQTAASVAEVKQAFGVFDVNGDGFIDV 133

Query: 61  DELQRVLCVLGFKEGEAIQNCRRMINKFDEDNDGRIDFQEFVKLMESAV 109
           +ELQRV+CVLGFKEGE I+NC +MI KFD + DGRIDF+EFVKLME+ V
Sbjct: 134 EELQRVMCVLGFKEGEGIENCEKMIRKFDSNKDGRIDFEEFVKLMEAVV 180

[Close]

BLAST of Cp4.1LG13g08470 vs. TAIR 10
Match: AT5G39670.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 105.9 bits (263), Expect = 2.1e-23
Identity = 56/104 (53.85%), Postives = 70/104 (67.31%), Query Frame = 0


Query: 4   VMGELGLSWEEETEESLPVVGSMEEMCRIFDQTAASAAEVKEAFDVFDVNSDGFIDGDEL 63
           VM  LGLS ++E  E L    S +E+  +F++   S  EVK+AFDVFD N DGFID  +L
Sbjct: 99  VMKSLGLSTDQE-NEGLQKQYSSKEVSNLFEEKEPSLEEVKQAFDVFDENRDGFIDPIDL 158

Query: 64  QRVLCVLGFKEGEAIQNCRRMINKFDEDNDGRIDFQEFVKLMES 108
           QRVL +LG K+G  ++NCRRMI  FD   DGRIDF  FVK ME+
Sbjct: 159 QRVLTILGLKQGSNLENCRRMIRSFDGSKDGRIDFYGFVKFMEN 201

[Close]

BLAST of Cp4.1LG13g08470 vs. TAIR 10
Match: AT3G29000.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 104.0 bits (258), Expect = 7.9e-23
Identity = 54/107 (50.47%), Postives = 70/107 (65.42%), Query Frame = 0


Query: 4   VMGELGLSWEEETEESLPVVGSMEEMCRIFDQTAASAAEVKEAFDVFDVNSDGFIDGDEL 63
           VM  LGL +    ++ L    S +E+  +F++  AS  EVK+AFDVFD N DGFID  EL
Sbjct: 91  VMRSLGLFY---NDDQLQEQYSAKEVSSLFEEKEASLEEVKQAFDVFDENKDGFIDAIEL 150

Query: 64  QRVLCVLGFKEGEAIQNCRRMINKFDEDNDGRIDFQEFVKLMESAVY 111
           QRVL +LGFK+G  + NC  MI   D + DG+IDF EFVK ME++ Y
Sbjct: 151 QRVLTILGFKQGSYLDNCLVMIRSLDGNKDGKIDFNEFVKFMETSFY 194

[Close]

BLAST of Cp4.1LG13g08470 vs. TAIR 10
Match: AT1G05990.1 (EF hand calcium-binding protein family )

HSP 1 Score: 78.2 bits (191), Expect = 4.6e-15
Identity = 35/75 (46.67%), Postives = 53/75 (70.67%), Query Frame = 0


Query: 32  IFDQTAASAAEVKEAFDVFDVNSDGFIDGDELQRVLCVLGFKEGEAIQNCRRMINKFDED 91
           I D+      ++KEAF+VFD N DGFI  DEL+ VL  LG K+G+ + +C++MI K D D
Sbjct: 69  IMDEEDEEEEDMKEAFNVFDQNGDGFITVDELKAVLSSLGLKQGKTLDDCKKMIKKVDVD 128

Query: 92  NDGRIDFQEFVKLME 107
            DGR++++EF ++M+
Sbjct: 129 GDGRVNYKEFRQMMK 143

[Close]

BLAST of Cp4.1LG13g08470 vs. TAIR 10
Match: AT4G03290.1 (EF hand calcium-binding protein family )

HSP 1 Score: 77.4 bits (189), Expect = 7.9e-15
Identity = 35/83 (42.17%), Postives = 55/83 (66.27%), Query Frame = 0


Query: 24  GSMEEMCRIFDQTAASAAEVKEAFDVFDVNSDGFIDGDELQRVLCVLGFKEGEAIQNCRR 83
           G + +   + D+      ++KEAF+VFD N DGFI  DEL+ VL  LG K+G+ ++ CR+
Sbjct: 63  GELYKTIMVEDEDEVGEEDMKEAFNVFDRNGDGFITVDELKAVLSSLGLKQGKTLEECRK 122

Query: 84  MINKFDEDNDGRIDFQEFVKLME 107
           MI + D D DGR+++ EF ++M+
Sbjct: 123 MIMQVDVDGDGRVNYMEFRQMMK 145

[Close]

BLAST of Cp4.1LG13g08470 vs. TAIR 10
Match: AT3G47480.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 75.5 bits (184), Expect = 3.0e-14
Identity = 36/66 (54.55%), Postives = 50/66 (75.76%), Query Frame = 0


Query: 43  VKEAFDVFDVNSDGFIDGDELQRVLCVLGFKEGEAIQNCRRMINKFDEDNDGRIDFQEFV 102
           VKEAF +FD N DGFID +EL+ VL +LG+ E   ++ CR+M+  +DE+ DG+IDF EFV
Sbjct: 117 VKEAFRLFDENQDGFIDENELKHVLSLLGYDECTKME-CRKMVKVYDENRDGKIDFYEFV 176

Query: 103 KLMESA 109
           KL+E +
Sbjct: 177 KLIEKS 181

The following BLAST results are available for this feature:

BLAST of Cp4.1LG13g08470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93Z27	2.9e-22	53.85	Probable calcium-binding protein CML46 OS=Arabidopsis thaliana OX=3702 GN=CML46 ...	[more]
Q9MBG5	1.1e-21	50.47	Probable calcium-binding protein CML45 OS=Arabidopsis thaliana OX=3702 GN=CML45 ...	[more]
Q0DZP5	6.5e-14	51.43	Probable calcium-binding protein CML17 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q9LNE7	6.5e-14	46.67	Calmodulin-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=CML7 PE=2 SV=1	[more]
Q9ZR02	1.1e-13	42.17	Calmodulin-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=CML6 PE=2 SV=1	[more]

BLAST of Cp4.1LG13g08470 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7016132.1	3.23e-68	95.45	putative calcium-binding protein CML45, partial [Cucurbita argyrosperma subsp. a...	[more]
XP_022939128.1	2.71e-67	95.45	probable calcium-binding protein CML45 [Cucurbita moschata]	[more]
KAG6578574.1	2.71e-67	95.45	putative calcium-binding protein CML46, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_022993675.1	1.05e-64	91.82	probable calcium-binding protein CML30 [Cucurbita maxima]	[more]
XP_008459700.2	6.46e-46	69.72	PREDICTED: probable calcium-binding protein CML30 [Cucumis melo]	[more]

BLAST of Cp4.1LG13g08470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FKT4	1.31e-67	95.45	probable calcium-binding protein CML45 OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1JZ70	5.08e-65	91.82	probable calcium-binding protein CML30 OS=Cucurbita maxima OX=3661 GN=LOC1114895...	[more]
A0A1S3CAB3	3.13e-46	69.72	probable calcium-binding protein CML30 OS=Cucumis melo OX=3656 GN=LOC103498740 P...	[more]
A0A5A7T9C9	3.38e-46	69.72	Putative calcium-binding protein CML30 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A0A0KS94	1.42e-44	67.89	Calcium ion binding protein OS=Cucumis sativus OX=3659 GN=Csa_5G636620 PE=4 SV=1	[more]

BLAST of Cp4.1LG13g08470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G39670.1	2.1e-23	53.85	Calcium-binding EF-hand family protein	[more]
AT3G29000.1	7.9e-23	50.47	Calcium-binding EF-hand family protein	[more]
AT1G05990.1	4.6e-15	46.67	EF hand calcium-binding protein family	[more]
AT4G03290.1	7.9e-15	42.17	EF hand calcium-binding protein family	[more]
AT3G47480.1	3.0e-14	54.55	Calcium-binding EF-hand family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01697	PARVALBUMIN	coord: 51..67 score: 44.26 coord: 29..47 score: 23.68 coord: 88..101 score: 49.46
None	No IPR available	GENE3D	1.10.238.10		coord: 11..107 e-value: 1.8E-21 score: 78.3
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 4..108
None	No IPR available	PANTHER	PTHR10891:SF805	CALCIUM-BINDING PROTEIN CML45-RELATED	coord: 4..108
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 42..70 e-value: 4.5E-4 score: 29.5 coord: 80..108 e-value: 1.1E-5 score: 34.9
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 42..106 e-value: 2.5E-13 score: 50.3
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 38..73 score: 14.959732
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 76..110 score: 12.560727
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 42..105 e-value: 8.44952E-17 score: 66.8025
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 89..101
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 51..63
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 25..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG13g08470.1	Cp4.1LG13g08470.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding