Cp4.1LG13g08180 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG13g08180
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Eukaryotic translation initiation factor 3 subunit M
Location	Cp4.1LG13: 8109688 .. 8116373 (-)
RNA-Seq Expression	Cp4.1LG13g08180
Synteny	Cp4.1LG13g08180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAGTAGGATCAAATTAATTCACATACAAAAGAAGAGGGAATTTATGAGGAGAAAAGCTTTTAGTTCACGCGACTGTGGCACGTGAGAATCACAAGCTTTAAGCGCCTAGGGTTTTCTGCAGCTTCCCTTGGCGCCTTGCTCTACTGTAACAAAAGCGCGGGTGGGGAGATAGAATCTTGGATTTGTTTGAGAGGTTCTTCAATGGCGACTGTCGTTGAAACCTCCGAGGAAGATGCAGCGCTCACCGTTGTTCGCTTTGTCTCCGAGCTTGCTTGGGCCGACGCCGGTCCCGAGGTTCCTAATCTTTAATTCTTTTAATCTTTCAAATCAGTTTGGTGCTTTGGCAGCGCCGTCCACATCTCGACTTTGTGGATTGCACTAGGTTTTGGTTTACAACTTCATCGAAACTTTTTTTTCACTGCTCAATCGTCTATAATGTTTTTTTTTTTCTTTTTGTTAAAAGAAAACAGAAAAAGAAAAGGAAAAAACCTCTAGAATTACGGTTGTTGATTTATTCTGTCGGAAATTGAAAATTATGATAAGTTGTAGCGATTTTTTGATTTAGTCTGTCGGAAATTGGAGGACATGTACATGTAGTTCTGGTAATTCGCGGGGCGTATGCTACGGCTAATGTTTTCCACATACGCCGGAAGATATGGAAAACAGTGCTTATTGAGCACTGTGAAGATATTTGTCCGTTAGGATTATTTACATAATCTTGCTATATCAACACGGGTTGCGATTAGATTTTAGGTGCCTTAGAAGCAAAGAGTTGAGGAAAATGTATATTGCTTATATAATCTATTTTTTCTGCCTAATTTGAGGTCGTACATAACGAGAATAAATGTTTTTTTCCCCTTCCCTTATGTTTTTTAAGCACTACAAATTGTTCTTTTGTCTATGATGTCGACTAAAATACACTCCGCTTTTTAACTGAATGAATCATCATATTGCAGATTATTTGTTAGTACTGTGGCTTATTAATCGGCTTTTTTCTTTATTTGTAGGCTGCTGAGCCACAAGTTAATAGACTCTGCGTTGAAGCTCAAGAATGTATGGTTATGGGAAGATGGGTGGATTTGGCATCTTTAATGCTGGCTTCTACCGACGTGATATTTTCAAAAGTTTCTGAAAAAGGTAAATATAGTTTGAAAGTGAGAACTAAGAATGAATCTCCAGGACTTTTTATTAATTTGTTTTGGGGGGGAGGGGATGGCGAACCATTTTCTCTGTATTTTTGTTTTCAAGGGTTGTGATTGTGATACAATGAAGGTCGTTGAGGTTGCTTCTTTTATTGGTATTATTCTTCTTAAGTGGAGCAATAGACATGTCTGCATGGAGACAAGTTTTTTTTTTTTTTTTTCATTTTTGTGAAAAGAAAGTCGAGGAGAGAGAAAATGTTTCATCCATGTACACTAACACGGTTCTTCCCTTGGTACAGATCTCGAGTGTGTATTCACTATTATCTGTAATCTTGTCACGAAGTCTGGAAACCCAGACGAATCATTTGAAATAGCGAAGGTTATATCTGCTAAGATTGGCCAACAGCCAAATGACAAACCTGCACTTCGTTTAAAGATGTAATGCATGCCAAATTTGTGCATTTTGTTATATGATTTGGCTCTTCTTTTTTTAAAAAGTTTTCATCTATTACAGCTTGTTCAATCTGTACAACCTACTTGAGAATCCATATAGCCGGTTCTATGTATACATGAAGGCCCTGGATTTATCTCTTAAGGGGAAGGTCCCTGAACATATAATTCCCTCATTAAAAAAGATAGACAGTTTCTTGAGAGAGTGGAATATTGGAATCATAGAGCAGAGAGAACTTTTCCTCGCCATCTCCGATGTTTTGAAAGGAAGTAAGAGGTATCACAGAATGAATTATGTTACTTAACGAGTGTCCTTTAGTATCTTTTTTACATTTTTACTTACACTTACTGTTACCTCCTACCTTTTTTTGTTTAGTCTTACTCATTATTATAAACTAATATGTGATTGTCAACTTCTCTTTGGTTTCAGTTCTGCGAACGATTATTTCAAGTTTCTTACCAAATATTTGGCCACTTTCACTGGTGAAGATGACTTGAATGAAGCAAAGGAGGAAGCTGCTCATGCAATTGTTGAATTCATTAAGGCACCCAACTTATTTAAGGTATTTTAGTGTCTTATCCGGGAATTATATTTTTGTGTCTTCTGCGGCAATTATATTCTTAAAGCTATTTTACCATGGCTTAAACAACTTGTTACTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNAGATTCAAACTTTTGACCATTTAGTTCAGGATATATGCTCATGTCTAACAAACTCTGGTTATTGTTTCTTGTTGAAAAAACTGAATATTTTTCTTAAAAGTGTTTATTGGACTGCATGTGAGTTTTTGGAATGCATTTTTGTTCTTCATATTATTTTTATTTTTTATTTCTTTTGGCTACTGATTAAATTAGAAGAGAAAAAATTTTCACCATTGTTGTATTCCTAATTTATGTTTCAAATTTAATCTTTAACCAATATTATTGACTTGTTGTCTAAAAACTATTCTTTGTGTTTGCAGTGTGATTTGTTAGACATGCCTGCTGTAGGGCAACTGGAGAAGGATCCCAAATATTCATTGGTTTATCAGCTTCTGAAGATTTTTCTGACTCAGAGATTGGATGCTTACTTGGAATTTCAAGCTGCAAATTCTACTTTATTGAAAAGCTATGGTAAACTTCTCCACTCTAGTTATAATTCTAATAATCCCTAATTTTAGCTTTGTTTTTTTGACTCAATACTCATTGGATATATTTCTTGCACTGGTGAAGGTCTCGTCCATGAAGACTGTATTGCAAAAATGAGGTTATTGTCATTGGTGGATCTTGGCTCAAATGAATCTGCCCGCATTCCGTATGCTCTCATTAAGGACACACTCAGGGTAAAGTAACTTCCCTTTTACAAGTTTACTTTTGTGTTTTATTTTATCATTTGGGTATGATTTGTGCTTCAGATCAATGATGATGAGGTGGAACTGTGGGTCGTGAAGGCCATTACTTCCAAATTGATTGACTGCAAAATGGACCAGATGAATGGAGTTGTGATTGTGAGGTGTGTGCTGCACACTATCCACATCTCTGCAACACACTTCTTTGGTTAGGCATAAGCTTATTTTGTACCAATATAATTGTTCTTTTGATGTTCACGTGCAGCCGCTGTAGTGACCGTGTATTTGGGCAGCATCAGTGGGAAACGCTTAGAATGAAGCTAGCCACATGGAGGGTAAGTTATTTCTTTTGTCTCTCATAATATTAAAGATAACTTTCGTTAAAGTTCCTCTACATGTGTCACATTTTCTTTTGGGAGTAGACAACTACAAAGTCCAGTAATTAGTCGTAAGTTTGGACACCAATTTTTCCTTTAACAAGGCTTGACAAGGTGCAGTTAGTGATCTGCCTTTCCTTCTGGTTTTCCGCCTTGAACTAAACTATGGTGATGCTTTTACAGGGTAATATTGCGAATGTCATTGGCACCATTCGAGCAAACAAAGTAGTTGAGGATGGATCACAGGGTGTTCAAGGTTTGGCAATTCGCTGAAGATTGGATTTTTGTTCATCTGTAAGTTAAACCATCTACCTTTCTGCATAAATTCTAGGATGTATCATGTTTTACTCAATCCTCTAAATTTGTTCAAATTTTGACTTGGGGAACTAGATTCGAATTGGTTTAAATTAATGGCTTATACCATCGTCTATATACCCCTAGGCCATTCAATCGGCTCTCTGATCTTAATTTATTTGAGTAGTGTTTTTTTTAATTTTATTTTACCTCCCTCAGATTCAATTTGTTTTTATGTTTAGCATCTTTTGTTAATAGCAACTATGCATGGTGGTTCTTTTTCTATATTTATGTGTATATGTCACGTTTAATTTAGACATAATTAAACATGTATCTGTTCGCCATGGCTGATCGGTCAGGGTTGTTGGCCTTGCTCTTTTGAACATGGCTGATCGGTCAGGTTCCTTTCTCTTCTATACATATCCATCAAACTTCTAATGTCCCACACTTAGCAAAAAGGGGTGAAAATTTCTCATGGAACCTGCCTTAAGCTGGCGGTGTTGGGAAAAACTTTTTCCTGTATTGGACCCCAATTCCGGATCCTTGGAATTAATACTATATAACCAGAAACAAAGCCCAACGAGCAAAATTCAAAACTAAAATGGGGAAATTCCCACCTTGAGCCTGCAACTTTTCCCGTGGAGAATTCCCACCTCAAGCCCAACCAAATATTAGGAGGATTTATGTTGGTTGTGGACGGAGGGTGAATTATTTCCTAGACTTGTCTTGCCTGTCCTCCCGATGCCCTACTGACAATGATAGAGAACGAACTTTAATCTTAATCCTTGTACAGTTTTTGCATAATCATTGCTTGAAACTCGGTTATAATCTTTGTCCGTTGGATTCGTTGGTGGCATTGTAAAATGCTTTTCCTTTCAATTAATCATGGCAGCGTGCAGTGTTGAGTGGTTAGCGTGGAAGAGGATTTTGTTCATAGATGAGAATTTTGAGAATTGCTCACCATGTTCTCTTTTTTGATGAATAATTTGTTCTTTCTGTATGAAGGTGAAATGAAAACTCGGAAAACCCATCAACTATGGGTTCTGTTGGTTTGGATTTTACACACCTTGTCAAGTGTGAATAGTTGCGTAGTGAGAGAGGAAAGAAGAGAGGGCTTAAAATTTAACGAATTTGTGTTTGATCATTCATCCAATTATCAGTGTTTGCTCCATGGAAATATGCAGAGAGCTTAAAATTGAAGGGGCCACATATAAAGTATGTTCTGTTCAACTTCTACTTTTTGGGTATTGGTATTAGTATTGACCTTTCACCTTTTGCCATCCCACTGAAACGCTTGACGTCTTGTTAGTAGCAAAAGTAAAATGTAATGTGTACCCATCTTTAACTTTAATTTTAAAAGTTGGTGCGACATGTCGTCTCTACCAATCTGAATTATGACTTCCTTTTCTGCTAGTATAATTATGTTTTTCTCTCTTGAAACTACTGAAACTAGAGTTGTTAAACCCATTCCTTCAAATTTATTTGATTTATAGATATGAAAAGAAAGAAAATTATATTGTTTTTGAACTACTTTCTTTATGTTTCCTGTAATATATAAGGTTACTCAGTTGTACTTAAAGCACTATATATATATGCAGGATGCTTTTCAACTTTAACTTTTATAAAGTTTCAATCTCTTTTTAACCCATAAAAAAGTTTCAATTTTGTTATTTATTGATTAATGTTTTTCTATTTTATGGTTTTTCTTTATGGGTATTAAACTTGCAGGAAAGGCATAATTTTAGAGGAGTTGAATTATTTCAGCCTTCAGAGAGGTAAAATTGTCATCTTGCTCAATTACCTAAGATTTAGTCATTTATTGACATGCAATATTCAAACAAGCTTCTCTATTGTATAAATCAATTAAAGCTATTTATTCCAAGATTTCCAGAAAAAAAGAAAAAAGAAAAAAGAAAAAAGCTTGGAAAACAGTGAGCATGAAGAAAGGTAGAAGGGAACCCACATCACTGTTCACTACCACGATACAATTTAGACAAAAGAAAAAGTGAAACAAAAGCAAGACTTCTCGATATGAATCGTTCCATATATTATTAGACGTGTCCCTGTTGTAGCTAGTGTTTTAAATACTTAAAATCATTCTAAATAGATTGTTAATTCTTTGAATGTTTGAATGTAGTAAAAGCTTGCAAATTGGTGAGACTAGTGAACTCTAAAATGAATTTGGATAAATACAAAGTTTAAATTAAAAAAAAAAAAAAAAAAAACTAAAGCAGCAAAAGGAAAAGGGAAGGATAAAATAGTAACAATAATGCAGAGAAAGAGAAATTAGAATCCCTGCCTCCATCTCCAAGTTTCTTTAATTCCCACTAACACTATAAATCCCCCCCTCCCACCTTTGATAATCCCACATTCAGAGAAAGAGAAAAGAGAGAGCCAAAAATGGGTGGTCGGAGTTCGTTTTGGGGAGTAGCAGTGGCGGCGTTGATGGTGACAATCATCCTCTGTTCCAGCAACAGCAGCAGAGCTTCGAGTCTGGGCAGGGCCAACGCCACGTACGGCGAGGTGGAGGTGGAATTGCTGGTGCGTCGTGAGATAGCTCGGTTTCTGAATTTTAATGGCCTGAAAGTCCACACAGACAAAACCCAGAACCCGTTCGTCAAATCTTGTGGTAACGGCCAGGGAAACCCCATGGGCGACTGCAGTGGTAGCCCCACTAATAAGAAACACTGTAACTCATACGCCGGCGCCAGCGCCTGCTAGAGTCGAACCCTTTGGTTCCATGTAGTATTATTGTTATCATGGTTCTGTTTTCTCTGCCATCTAACTCCCTTTCCTCTTTCGCTCTCTGTGTTTGTGTTTCAAGTTGCTGTTTATAAGGGTCTCTGTCTTCTGTGGAGTTCTTGCTTTAATCAGCCATGGTTGGGTATGTGTATGGCTTTGGTTGTTGCTGTTGTTTGTGTCAAATAAGAACAATGAAATGCCTCATCTTCTTCTCTATCCTTTTAACTCATTGTGTTTAATGATTCGCTAACTTCATGTCCAATAATTTATTAATTTAAAACAAAGGGTTGAAAATGCTTCCAACTATTAT

mRNA sequence

AGAAGTAGGATCAAATTAATTCACATACAAAAGAAGAGGGAATTTATGAGGAGAAAAGCTTTTAGTTCACGCGACTGTGGCACGTGAGAATCACAAGCTTTAAGCGCCTAGGGTTTTCTGCAGCTTCCCTTGGCGCCTTGCTCTACTGTAACAAAAGCGCGGGTGGGGAGATAGAATCTTGGATTTGTTTGAGAGGTTCTTCAATGGCGACTGTCGTTGAAACCTCCGAGGAAGATGCAGCGCTCACCGTTGTTCGCTTTGTCTCCGAGCTTGCTTGGGCCGACGCCGGTCCCGAGGCTGCTGAGCCACAAGTTAATAGACTCTGCGTTGAAGCTCAAGAATGTATGGTTATGGGAAGATGGGTGGATTTGGCATCTTTAATGCTGGCTTCTACCGACGTGATATTTTCAAAAGTTTCTGAAAAAGATCTCGAGTGTGTATTCACTATTATCTGTAATCTTGTCACGAAGTCTGGAAACCCAGACGAATCATTTGAAATAGCGAAGGTTATATCTGCTAAGATTGGCCAACAGCCAAATGACAAACCTGCACTTCGTTTAAAGATCTTGTTCAATCTGTACAACCTACTTGAGAATCCATATAGCCGGTTCTATGTATACATGAAGGCCCTGGATTTATCTCTTAAGGGGAAGGTCCCTGAACATATAATTCCCTCATTAAAAAAGATAGACAGTTTCTTGAGAGAGTGGAATATTGGAATCATAGAGCAGAGAGAACTTTTCCTCGCCATCTCCGATGTTTTGAAAGGAAGTAAGAGTTCTGCGAACGATTATTTCAAGTTTCTTACCAAATATTTGGCCACTTTCACTGGTGAAGATGACTTGAATGAAGCAAAGGAGGAAGCTGCTCATGCAATTGTTGAATTCATTAAGGCACCCAACTTATTTAAGTGTGATTTGTTAGACATGCCTGCTGTAGGGCAACTGGAGAAGGATCCCAAATATTCATTGGTTTATCAGCTTCTGAAGATTTTTCTGACTCAGAGATTGGATGCTTACTTGGAATTTCAAGCTGCAAATTCTACTTTATTGAAAAGCTATGGTCTCGTCCATGAAGACTGTATTGCAAAAATGAGGTTATTGTCATTGGTGGATCTTGGCTCAAATGAATCTGCCCGCATTCCGTATGCTCTCATTAAGGACACACTCAGGATCAATGATGATGAGGTGGAACTGTGGGTCGTGAAGGCCATTACTTCCAAATTGATTGACTGCAAAATGGACCAGATGAATGGAGTTGTGATTGTGAGCCGCTGTAGTGACCGTGTATTTGGGCAGCATCAGTGGGAAACGCTTAGAATGAAGCTAGCCACATGGAGGGGTAATATTGCGAATGTCATTGGCACCATTCGAGCAAACAAAGTAGTTGAGGATGGATCACAGGGTGTTCAAGGTTTGGCAATTCGCTGAAGATTGGATTTTTGTTCATCTGTGAAATGAAAACTCGGAAAACCCATCAACTATGGGTTCTGTTGGTTTGGATTTTACACACCTTGTCAAGTGTGAATAGTTGCGTAGTGAGAGAGGAAAGAAGAGAGGGCTTAAAATTTAACGAATTTGTGTTTGATCATTCATCCAATTATCAGTGTTTGCTCCATGGAAATATGCAGAGAGCTTAAAATTGAAGGGGCCACATATAAAGAAAGGCATAATTTTAGAGGAGTTGAATTATTTCAGCCTTCAGAGAGGTAAAATTGTCATCTTGCTCAATTACCTAAGATTTAGTCATTTATTGACATGCAATATTCAAACAAGCTTCTCTATTGTATAAATCAATTAAAGCTATTTATTCCAAGATTTCCAGAAAAAAAGAAAAAAGAAAAAAGAAAAAAGCTTGGAAAACAGTGAGCATGAAGAAAGGTAGAAGGGAACCCACATCACTGTTCACTACCACGATACAATTTAGACAAAAGAAAAAGTGAAACAAAAGCAAGACTTCTCGATATGAATCGTTCCATATATTATTAGACGTGTCCCTGTTGTAGCTAGTGTTTTAAATACTTAAAATCATTCTAAATAGATTGTTAATTCTTTGAATGTTTGAATGTAGTAAAAGCTTGCAAATTGGTGAGACTAGTGAACTCTAAAATGAATTTGGATAAATACAAAGTTTAAATTAAAAAAAAAAAAAAAAAAAACTAAAGCAGCAAAAGGAAAAGGGAAGGATAAAATAGTAACAATAATGCAGAGAAAGAGAAATTAGAATCCCTGCCTCCATCTCCAAGTTTCTTTAATTCCCACTAACACTATAAATCCCCCCCTCCCACCTTTGATAATCCCACATTCAGAGAAAGAGAAAAGAGAGAGCCAAAAATGGGTGGTCGGAGTTCGTTTTGGGGAGTAGCAGTGGCGGCGTTGATGGTGACAATCATCCTCTGTTCCAGCAACAGCAGCAGAGCTTCGAGTCTGGGCAGGGCCAACGCCACGTACGGCGAGGTGGAGGTGGAATTGCTGGTGCGTCGTGAGATAGCTCGGTTTCTGAATTTTAATGGCCTGAAAGTCCACACAGACAAAACCCAGAACCCGTTCGTCAAATCTTGTGGTAACGGCCAGGGAAACCCCATGGGCGACTGCAGTGGTAGCCCCACTAATAAGAAACACTGTAACTCATACGCCGGCGCCAGCGCCTGCTAGAGTCGAACCCTTTGGTTCCATGTAGTATTATTGTTATCATGGTTCTGTTTTCTCTGCCATCTAACTCCCTTTCCTCTTTCGCTCTCTGTGTTTGTGTTTCAAGTTGCTGTTTATAAGGGTCTCTGTCTTCTGTGGAGTTCTTGCTTTAATCAGCCATGGTTGGGTATGTGTATGGCTTTGGTTGTTGCTGTTGTTTGTGTCAAATAAGAACAATGAAATGCCTCATCTTCTTCTCTATCCTTTTAACTCATTGTGTTTAATGATTCGCTAACTTCATGTCCAATAATTTATTAATTTAAAACAAAGGGTTGAAAATGCTTCCAACTATTAT

Coding sequence (CDS)

ATGGCGACTGTCGTTGAAACCTCCGAGGAAGATGCAGCGCTCACCGTTGTTCGCTTTGTCTCCGAGCTTGCTTGGGCCGACGCCGGTCCCGAGGCTGCTGAGCCACAAGTTAATAGACTCTGCGTTGAAGCTCAAGAATGTATGGTTATGGGAAGATGGGTGGATTTGGCATCTTTAATGCTGGCTTCTACCGACGTGATATTTTCAAAAGTTTCTGAAAAAGATCTCGAGTGTGTATTCACTATTATCTGTAATCTTGTCACGAAGTCTGGAAACCCAGACGAATCATTTGAAATAGCGAAGGTTATATCTGCTAAGATTGGCCAACAGCCAAATGACAAACCTGCACTTCGTTTAAAGATCTTGTTCAATCTGTACAACCTACTTGAGAATCCATATAGCCGGTTCTATGTATACATGAAGGCCCTGGATTTATCTCTTAAGGGGAAGGTCCCTGAACATATAATTCCCTCATTAAAAAAGATAGACAGTTTCTTGAGAGAGTGGAATATTGGAATCATAGAGCAGAGAGAACTTTTCCTCGCCATCTCCGATGTTTTGAAAGGAAGTAAGAGTTCTGCGAACGATTATTTCAAGTTTCTTACCAAATATTTGGCCACTTTCACTGGTGAAGATGACTTGAATGAAGCAAAGGAGGAAGCTGCTCATGCAATTGTTGAATTCATTAAGGCACCCAACTTATTTAAGTGTGATTTGTTAGACATGCCTGCTGTAGGGCAACTGGAGAAGGATCCCAAATATTCATTGGTTTATCAGCTTCTGAAGATTTTTCTGACTCAGAGATTGGATGCTTACTTGGAATTTCAAGCTGCAAATTCTACTTTATTGAAAAGCTATGGTCTCGTCCATGAAGACTGTATTGCAAAAATGAGGTTATTGTCATTGGTGGATCTTGGCTCAAATGAATCTGCCCGCATTCCGTATGCTCTCATTAAGGACACACTCAGGATCAATGATGATGAGGTGGAACTGTGGGTCGTGAAGGCCATTACTTCCAAATTGATTGACTGCAAAATGGACCAGATGAATGGAGTTGTGATTGTGAGCCGCTGTAGTGACCGTGTATTTGGGCAGCATCAGTGGGAAACGCTTAGAATGAAGCTAGCCACATGGAGGGGTAATATTGCGAATGTCATTGGCACCATTCGAGCAAACAAAGTAGTTGAGGATGGATCACAGGGTGTTCAAGGTTTGGCAATTCGCTGA

Protein sequence

MATVVETSEEDAALTVVRFVSELAWADAGPEAAEPQVNRLCVEAQECMVMGRWVDLASLMLASTDVIFSKVSEKDLECVFTIICNLVTKSGNPDESFEIAKVISAKIGQQPNDKPALRLKILFNLYNLLENPYSRFYVYMKALDLSLKGKVPEHIIPSLKKIDSFLREWNIGIIEQRELFLAISDVLKGSKSSANDYFKFLTKYLATFTGEDDLNEAKEEAAHAIVEFIKAPNLFKCDLLDMPAVGQLEKDPKYSLVYQLLKIFLTQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAITSKLIDCKMDQMNGVVIVSRCSDRVFGQHQWETLRMKLATWRGNIANVIGTIRANKVVEDGSQGVQGLAIR

Homology

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BLAST of Cp4.1LG13g08180 vs. ExPASy Swiss-Prot
Match: Q54KZ8 (Eukaryotic translation initiation factor 3 subunit M OS=Dictyostelium discoideum OX=44689 GN=eif3m PE=1 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 3.3e-55
Identity = 121/347 (34.87%), Postives = 205/347 (59.08%), Query Frame = 0


Query: 56  LASLMLASTDVIFS--KVSEKDLECVFTIICNLVTKSGNPDESFEIAKVISAKIGQQPND 115
           L+ ++   T+ +F   K S+KD+E  F +I  ++ K  N DE   +++ I   +   P +
Sbjct: 50  LSKIVSNETEFLFKECKDSDKDIEGFFNVILTILHKLENEDEINIVSQKIRDSLSAHPTE 109

Query: 116 KPALRLKILFNLYNLLE-NPYSRFYVYMKALDLSLKGKVPEHIIPSLKKIDSFLREWNIG 175
              L++KIL NL+N  +     R+ ++   + L+      E +   +  IDS+L +WN+ 
Sbjct: 110 NSQLKIKILTNLFNSFQPKSTQRYDIFFALVKLASDSNNLEFVKYQITDIDSWLEDWNVS 169

Query: 176 IIEQRELFLAISDVLKGSKSSANDYFKFLTKYLATFTGEDDLNEAKEEAAHAIVEFIKAP 235
           I ++R+L+  IS++ K  +   +   +FL KYL TFT ED   EA+E+A    +E I   
Sbjct: 170 IQQKRKLYKLISNIFKEKQRMLS--HQFLVKYLQTFTKEDS-QEAQEDAVRVCIESISLQ 229

Query: 236 NLFKCD-LLDMPAVGQLEKD--PKYSLVYQLLKIFLTQRLDAYLEFQAANSTLLKSYGLV 295
            L++ D LLD+PAV  LE       SL Y+L+KIF T++LD++L+FQ  N   L + GL 
Sbjct: 230 ELYQSDYLLDLPAVQYLEGSTVSANSLTYELMKIFATEQLDSFLQFQQKNPNFLSTIGLS 289

Query: 296 HEDCIAKMRLLSLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAITSKLIDCKMDQM 355
           ++DC+ K+RLLSL  L ++E +++PY+LI   L+I+++EVE+WV+ A+   L+D K+DQ+
Sbjct: 290 NDDCLQKIRLLSLATL-TSEQSKVPYSLISKMLQIDENEVEMWVINAMEGDLLDAKLDQL 349

Query: 356 NGVVIVSRCSDRVFGQHQWETLRMKLATWRGNIANVIGTIRANKVVE 397
           N +V V+  + RVF + QW  L  + + W+ ++ N++  I   K  +
Sbjct: 350 NRIVNVNSSTQRVFNKSQWSQLGQRFSVWKSSVKNLLQVIENAKTTQ 392

[Close]

BLAST of Cp4.1LG13g08180 vs. ExPASy Swiss-Prot
Match: Q5ZJ64 (Eukaryotic translation initiation factor 3 subunit M OS=Gallus gallus OX=9031 GN=EIF3M PE=2 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.9e-35
Identity = 105/338 (31.07%), Postives = 189/338 (55.92%), Query Frame = 0


Query: 51  GRWVDLASLMLASTDVIFSKVSEKDLECVFTIICNLVTKSGNPDESFEIAKVISAKIGQ- 110
           G  VDLA + +   DV   K  +KD+E V   + +L+     PD+   + + +  K+ + 
Sbjct: 37  GLHVDLAQI-IEVCDVCL-KEDDKDVESVMNSVVSLLLIL-EPDKQEALIESLCEKLVKF 96

Query: 111 QPNDKPALRLKILFNLYNLLE-NPYSRFYVYMKALDLSLKGKVPEHIIPSLKKIDSFLRE 170
           +  ++P+LRL++L NL++ ++ N   R+ VY   L ++      ++I   L ++  ++ +
Sbjct: 97  REGERPSLRLQLLSNLFHGMDKNTPVRYTVYCSLLKVASSCGAIQYIPTELDQVRKWISD 156

Query: 171 WNIGIIEQRELFLAISDVLKGSKSSANDYFKFLTKYLATFTGEDDLNEAKEEAAHAIVEF 230
           WN+   ++  L   + DVL   K S +   K + + L ++T ED+ ++A+ +A   IV  
Sbjct: 157 WNLSTDKKHTLLRLLYDVLVDCKKS-DTAAKVMVELLGSYT-EDNASQARVDAHRCIVRA 216

Query: 231 IKAPNLFKCD-LLDMPAVGQLEKDPKYSLVYQLLKIFLTQRLDAYLEFQAANSTLLKSYG 290
           +K PN F  D LL +  V  LE +    L++ LL IF++ +L +Y++F   N   + S G
Sbjct: 217 LKDPNTFLFDHLLALKPVKFLEGE----LIHDLLTIFVSAKLVSYVKFYQNNKDFIDSLG 276

Query: 291 LVHEDCIAKMRLLSLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAITSKLIDCKMD 350
           L+HE  +AKMRLL+ + + + E+  I +  ++  L+I  D+VE +V+ A+ +K++ CK+D
Sbjct: 277 LLHEQNMAKMRLLTFMGM-AVENKEISFDTMQQELQIGADDVEAFVIDAVKTKMVYCKID 336

Query: 351 QMNGVVIVSRCSDRVFGQHQWETLRMKLATWRGNIANV 386
           Q    V+VS  + R FG+ QW+ L   L TW+ N+  V
Sbjct: 337 QTQRKVVVSHSTHRTFGKQQWQQLYDTLNTWKQNLNQV 364

[Close]

BLAST of Cp4.1LG13g08180 vs. ExPASy Swiss-Prot
Match: Q7L2H7 (Eukaryotic translation initiation factor 3 subunit M OS=Homo sapiens OX=9606 GN=EIF3M PE=1 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 7.3e-34
Identity = 100/338 (29.59%), Postives = 187/338 (55.33%), Query Frame = 0


Query: 51  GRWVDLASLMLASTDVIFSKVSEKDLECVFTIICNLVTKSGNPDESFEIAKVISAKIGQ- 110
           G  VDLA ++ A    +  K  +KD+E V   + +L+     PD+   + + +  K+ + 
Sbjct: 37  GLHVDLAQIIEACD--VCLKEDDKDVESVMNSVVSLLLIL-EPDKQEALIESLCEKLVKF 96

Query: 111 QPNDKPALRLKILFNLYNLLE-NPYSRFYVYMKALDLSLKGKVPEHIIPSLKKIDSFLRE 170
           +  ++P+LRL++L NL++ ++ N   R+ VY   + ++      ++I   L ++  ++ +
Sbjct: 97  REGERPSLRLQLLSNLFHGMDKNTPVRYTVYCSLIKVAASCGAIQYIPTELDQVRKWISD 156

Query: 171 WNIGIIEQRELFLAISDVLKGSKSSANDYFKFLTKYLATFTGEDDLNEAKEEAAHAIVEF 230
           WN+   ++  L   + + L   K S +   K + + L ++T ED+ ++A+ +A   IV  
Sbjct: 157 WNLTTEKKHTLLRLLYEALVDCKKS-DAASKVMVELLGSYT-EDNASQARVDAHRCIVRA 216

Query: 231 IKAPNLFKCD-LLDMPAVGQLEKDPKYSLVYQLLKIFLTQRLDAYLEFQAANSTLLKSYG 290
           +K PN F  D LL +  V  LE +    L++ LL IF++ +L +Y++F   N   + S G
Sbjct: 217 LKDPNAFLFDHLLTLKPVKFLEGE----LIHDLLTIFVSAKLASYVKFYQNNKDFIDSLG 276

Query: 291 LVHEDCIAKMRLLSLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAITSKLIDCKMD 350
           L+HE  +AKMRLL+ + + + E+  I +  ++  L+I  D+VE +V+ A+ +K++ CK+D
Sbjct: 277 LLHEQNMAKMRLLTFMGM-AVENKEISFDTMQQELQIGADDVEAFVIDAVRTKMVYCKID 336

Query: 351 QMNGVVIVSRCSDRVFGQHQWETLRMKLATWRGNIANV 386
           Q    V+VS  + R FG+ QW+ L   L  W+ N+  V
Sbjct: 337 QTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQNLNKV 364

[Close]

BLAST of Cp4.1LG13g08180 vs. ExPASy Swiss-Prot
Match: Q5R8C4 (Eukaryotic translation initiation factor 3 subunit M OS=Pongo abelii OX=9601 GN=EIF3M PE=2 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 9.5e-34
Identity = 99/338 (29.29%), Postives = 187/338 (55.33%), Query Frame = 0


Query: 51  GRWVDLASLMLASTDVIFSKVSEKDLECVFTIICNLVTKSGNPDESFEIAKVISAKIGQ- 110
           G  +DLA ++ A    +  K  +KD+E V   + +L+     PD+   + + +  K+ + 
Sbjct: 37  GLHIDLAQIIEACD--VCLKEDDKDVESVMNSVVSLLLIL-EPDKQEALIESLCEKLVKF 96

Query: 111 QPNDKPALRLKILFNLYNLLE-NPYSRFYVYMKALDLSLKGKVPEHIIPSLKKIDSFLRE 170
           +  ++P+LRL++L NL++ ++ N   R+ VY   + ++      ++I   L ++  ++ +
Sbjct: 97  REGERPSLRLQLLSNLFHGMDKNTPVRYTVYCSLIKVAASCGAIQYIPTELDQVRKWISD 156

Query: 171 WNIGIIEQRELFLAISDVLKGSKSSANDYFKFLTKYLATFTGEDDLNEAKEEAAHAIVEF 230
           WN+   ++  L   + + L   K S +   K + + L ++T ED+ ++A+ +A   IV  
Sbjct: 157 WNLTTEKKHTLLRLLYEALVDCKKS-DAASKVMVELLGSYT-EDNASQARVDAHRCIVRA 216

Query: 231 IKAPNLFKCD-LLDMPAVGQLEKDPKYSLVYQLLKIFLTQRLDAYLEFQAANSTLLKSYG 290
           +K PN F  D LL +  V  LE +    L++ LL IF++ +L +Y++F   N   + S G
Sbjct: 217 LKDPNAFLFDHLLTLKPVKFLEGE----LIHDLLTIFVSAKLASYVKFYQNNKDFIDSLG 276

Query: 291 LVHEDCIAKMRLLSLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAITSKLIDCKMD 350
           L+HE  +AKMRLL+ + + + E+  I +  ++  L+I  D+VE +V+ A+ +K++ CK+D
Sbjct: 277 LLHEQNMAKMRLLTFMGM-AVENKEISFDTMQQELQIGADDVEAFVIDAVRTKMVYCKID 336

Query: 351 QMNGVVIVSRCSDRVFGQHQWETLRMKLATWRGNIANV 386
           Q    V+VS  + R FG+ QW+ L   L  W+ N+  V
Sbjct: 337 QTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQNLNKV 364

[Close]

BLAST of Cp4.1LG13g08180 vs. ExPASy Swiss-Prot
Match: A7SPX9 (Eukaryotic translation initiation factor 3 subunit M OS=Nematostella vectensis OX=45351 GN=v1g192238 PE=3 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.6e-33
Identity = 107/393 (27.23%), Postives = 199/393 (50.64%), Query Frame = 0


Query: 5   VETSEEDAALTVVRFVSELAWADAGPEAAEPQVNRLCVEAQECMVMGRWVDLASLMLAST 64
           ++  E++ A  +  F+ E   AD   E+  P  + L    + C V  +            
Sbjct: 9   IDAEEQEQAQEIRTFLKEQG-ADLKEESITPLQDELAEILECCQVCFK------------ 68

Query: 65  DVIFSKVSEKDLECVFTIICNLVTKSGNPDESFEIAK----VISAKIGQQPNDKPALRLK 124
                   + +LE V   I +LV     P++  E+ K     + A + +  N   A RL+
Sbjct: 69  -------EDAELESVMNSILSLVLVV--PEKRNELIKKCCDKLKANMSEDENSSAAARLR 128

Query: 125 ILFNLYN-LLENPYSRFYVYMKALDLSLKGKVPEHIIPSLKKIDSFLREWNIGIIEQREL 184
           +L  L++ L E    R  VY   L ++ K  + + I   L+ +  +L  W++   ++R++
Sbjct: 129 VLSVLFSGLPEKDPMRHEVYCTQLTIAAKASLVDDIPTELELVKGWLGLWDVDADQRRQV 188

Query: 185 FLAISDVLKGSKSSANDYFKFLTKYLATFTGEDDLNEAKEEAAHAIVEFIKAPNLFKCD- 244
           F  +   L   K S  +  K + + L+T+T +++ + A+E+A   +V  +  PN+   D 
Sbjct: 189 FRLLHGALHDEKRS-EEASKVMIELLSTYT-DENASAAREDAKSCVVSCLTKPNVLIMDN 248

Query: 245 LLDMPAVGQLEKDPKYSLVYQLLKIFLTQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMR 304
           +L +  V  L+ DP    +YQLL+IF++  +  Y +F  +N+  + S GL HE  + KMR
Sbjct: 249 ILSLKPVAVLQGDP----IYQLLQIFVSGDVQDYKKFYDSNTDFINSIGLSHEMNLKKMR 308

Query: 305 LLSLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAITSKLIDCKMDQMNGVVIVSRC 364
           +L+L+ +G  E+  I Y  +   L I+ DE+E ++++AI + L+  ++DQ++  VI+S  
Sbjct: 309 VLTLMSIG-KETDEISYEDLATKLGISSDEIEQFLIEAIQTGLVKARLDQVHRKVIISSV 368

Query: 365 SDRVFGQHQWETLRMKLATWRGNIANVIGTIRA 392
           + R FG +QW+ L  +L  WR N+ +V G +++
Sbjct: 369 AQRTFGINQWQNLHSRLVKWRDNLLSVRGGLQS 372

[Close]

BLAST of Cp4.1LG13g08180 vs. NCBI nr
Match: XP_023549625.1 (eukaryotic translation initiation factor 3 subunit M-like [Cucurbita pepo subsp. pepo] >XP_023549626.1 eukaryotic translation initiation factor 3 subunit M-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 797 bits (2058), Expect = 1.26e-290
Identity = 408/408 (100.00%), Postives = 408/408 (100.00%), Query Frame = 0


Query: 1   MATVVETSEEDAALTVVRFVSELAWADAGPEAAEPQVNRLCVEAQECMVMGRWVDLASLM 60
           MATVVETSEEDAALTVVRFVSELAWADAGPEAAEPQVNRLCVEAQECMVMGRWVDLASLM
Sbjct: 1   MATVVETSEEDAALTVVRFVSELAWADAGPEAAEPQVNRLCVEAQECMVMGRWVDLASLM 60

Query: 61  LASTDVIFSKVSEKDLECVFTIICNLVTKSGNPDESFEIAKVISAKIGQQPNDKPALRLK 120
           LASTDVIFSKVSEKDLECVFTIICNLVTKSGNPDESFEIAKVISAKIGQQPNDKPALRLK
Sbjct: 61  LASTDVIFSKVSEKDLECVFTIICNLVTKSGNPDESFEIAKVISAKIGQQPNDKPALRLK 120

Query: 121 ILFNLYNLLENPYSRFYVYMKALDLSLKGKVPEHIIPSLKKIDSFLREWNIGIIEQRELF 180
           ILFNLYNLLENPYSRFYVYMKALDLSLKGKVPEHIIPSLKKIDSFLREWNIGIIEQRELF
Sbjct: 121 ILFNLYNLLENPYSRFYVYMKALDLSLKGKVPEHIIPSLKKIDSFLREWNIGIIEQRELF 180

Query: 181 LAISDVLKGSKSSANDYFKFLTKYLATFTGEDDLNEAKEEAAHAIVEFIKAPNLFKCDLL 240
           LAISDVLKGSKSSANDYFKFLTKYLATFTGEDDLNEAKEEAAHAIVEFIKAPNLFKCDLL
Sbjct: 181 LAISDVLKGSKSSANDYFKFLTKYLATFTGEDDLNEAKEEAAHAIVEFIKAPNLFKCDLL 240

Query: 241 DMPAVGQLEKDPKYSLVYQLLKIFLTQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMRLL 300
           DMPAVGQLEKDPKYSLVYQLLKIFLTQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMRLL
Sbjct: 241 DMPAVGQLEKDPKYSLVYQLLKIFLTQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMRLL 300

Query: 301 SLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAITSKLIDCKMDQMNGVVIVSRCSD 360
           SLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAITSKLIDCKMDQMNGVVIVSRCSD
Sbjct: 301 SLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAITSKLIDCKMDQMNGVVIVSRCSD 360

Query: 361 RVFGQHQWETLRMKLATWRGNIANVIGTIRANKVVEDGSQGVQGLAIR 408
           RVFGQHQWETLRMKLATWRGNIANVIGTIRANKVVEDGSQGVQGLAIR
Sbjct: 361 RVFGQHQWETLRMKLATWRGNIANVIGTIRANKVVEDGSQGVQGLAIR 408

[Close]

BLAST of Cp4.1LG13g08180 vs. NCBI nr
Match: XP_022938986.1 (eukaryotic translation initiation factor 3 subunit M-like [Cucurbita moschata] >XP_022938987.1 eukaryotic translation initiation factor 3 subunit M-like [Cucurbita moschata])

HSP 1 Score: 791 bits (2044), Expect = 1.71e-288
Identity = 406/408 (99.51%), Postives = 406/408 (99.51%), Query Frame = 0


Query: 1   MATVVETSEEDAALTVVRFVSELAWADAGPEAAEPQVNRLCVEAQECMVMGRWVDLASLM 60
           MATVVETSEEDAALTVVRFVSELAWADAGPEAAEPQVNRLCVEAQECMVMGRWVDLASLM
Sbjct: 1   MATVVETSEEDAALTVVRFVSELAWADAGPEAAEPQVNRLCVEAQECMVMGRWVDLASLM 60

Query: 61  LASTDVIFSKVSEKDLECVFTIICNLVTKSGNPDESFEIAKVISAKIGQQPNDKPALRLK 120
           LASTDVIFSKVSEKDLECVFTIICNLVTKSGNPDESFEIAKVISAKIGQQPNDKPALRLK
Sbjct: 61  LASTDVIFSKVSEKDLECVFTIICNLVTKSGNPDESFEIAKVISAKIGQQPNDKPALRLK 120

Query: 121 ILFNLYNLLENPYSRFYVYMKALDLSLKGKVPEHIIPSLKKIDSFLREWNIGIIEQRELF 180
           ILFNLYNLLENPYSRFYVYMKALDLSLKGKVPEHIIPSLKKIDSFLREWNIGIIEQRELF
Sbjct: 121 ILFNLYNLLENPYSRFYVYMKALDLSLKGKVPEHIIPSLKKIDSFLREWNIGIIEQRELF 180

Query: 181 LAISDVLKGSKSSANDYFKFLTKYLATFTGEDDLNEAKEEAAHAIVEFIKAPNLFKCDLL 240
           LAISDVLKGSKSSANDYFKFLTKYLATFTGEDDLNEAKEEAAHAIVEFIKAPNLFKCDLL
Sbjct: 181 LAISDVLKGSKSSANDYFKFLTKYLATFTGEDDLNEAKEEAAHAIVEFIKAPNLFKCDLL 240

Query: 241 DMPAVGQLEKDPKYSLVYQLLKIFLTQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMRLL 300
           DMPAVGQLEKDPKYSLVYQLLKIFLTQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMRLL
Sbjct: 241 DMPAVGQLEKDPKYSLVYQLLKIFLTQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMRLL 300

Query: 301 SLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAITSKLIDCKMDQMNGVVIVSRCSD 360
           SLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAITSKLIDCKMDQMN VVIVSRCSD
Sbjct: 301 SLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAITSKLIDCKMDQMNEVVIVSRCSD 360

Query: 361 RVFGQHQWETLRMKLATWRGNIANVIGTIRANKVVEDGSQGVQGLAIR 408
           RVFGQHQWETLR KLATWRGNIANVIGTIRANKVVEDGSQGVQGLAIR
Sbjct: 361 RVFGQHQWETLRTKLATWRGNIANVIGTIRANKVVEDGSQGVQGLAIR 408

[Close]

BLAST of Cp4.1LG13g08180 vs. NCBI nr
Match: KAG7016108.1 (Eukaryotic translation initiation factor 3 subunit M, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 788 bits (2036), Expect = 2.84e-287
Identity = 405/408 (99.26%), Postives = 405/408 (99.26%), Query Frame = 0


Query: 1   MATVVETSEEDAALTVVRFVSELAWADAGPEAAEPQVNRLCVEAQECMVMGRWVDLASLM 60
           MATVVETSEEDAALTVVRFVSELAWADAGPEAAEPQVNRLCVEAQECMVMGRWVDLASLM
Sbjct: 1   MATVVETSEEDAALTVVRFVSELAWADAGPEAAEPQVNRLCVEAQECMVMGRWVDLASLM 60

Query: 61  LASTDVIFSKVSEKDLECVFTIICNLVTKSGNPDESFEIAKVISAKIGQQPNDKPALRLK 120
           LASTDVIFSKVSEKDLECVFTIICNLVTKSGNPDESFEIAKVISAKIGQQPNDKPALRLK
Sbjct: 61  LASTDVIFSKVSEKDLECVFTIICNLVTKSGNPDESFEIAKVISAKIGQQPNDKPALRLK 120

Query: 121 ILFNLYNLLENPYSRFYVYMKALDLSLKGKVPEHIIPSLKKIDSFLREWNIGIIEQRELF 180
           ILFNLYNLLENPYSRFYVYMKALDLSLKGKVPEHIIPSLKKIDSFLREWNIGIIEQRELF
Sbjct: 121 ILFNLYNLLENPYSRFYVYMKALDLSLKGKVPEHIIPSLKKIDSFLREWNIGIIEQRELF 180

Query: 181 LAISDVLKGSKSSANDYFKFLTKYLATFTGEDDLNEAKEEAAHAIVEFIKAPNLFKCDLL 240
           LAISDVLKGSKSSANDYFKFLTKYLATFTGEDDLNEAKEEAAHAIVEFIKAPNLFKCDLL
Sbjct: 181 LAISDVLKGSKSSANDYFKFLTKYLATFTGEDDLNEAKEEAAHAIVEFIKAPNLFKCDLL 240

Query: 241 DMPAVGQLEKDPKYSLVYQLLKIFLTQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMRLL 300
           DMPAVGQLEKD KYSLVYQLLKIFLTQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMRLL
Sbjct: 241 DMPAVGQLEKDTKYSLVYQLLKIFLTQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMRLL 300

Query: 301 SLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAITSKLIDCKMDQMNGVVIVSRCSD 360
           SLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAITSKLIDCKMDQMN VVIVSRCSD
Sbjct: 301 SLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAITSKLIDCKMDQMNEVVIVSRCSD 360

Query: 361 RVFGQHQWETLRMKLATWRGNIANVIGTIRANKVVEDGSQGVQGLAIR 408
           RVFGQHQWETLR KLATWRGNIANVIGTIRANKVVEDGSQGVQGLAIR
Sbjct: 361 RVFGQHQWETLRAKLATWRGNIANVIGTIRANKVVEDGSQGVQGLAIR 408

[Close]

BLAST of Cp4.1LG13g08180 vs. NCBI nr
Match: XP_022993614.1 (eukaryotic translation initiation factor 3 subunit M-like [Cucurbita maxima] >XP_022993615.1 eukaryotic translation initiation factor 3 subunit M-like [Cucurbita maxima])

HSP 1 Score: 782 bits (2020), Expect = 7.80e-285
Identity = 402/408 (98.53%), Postives = 402/408 (98.53%), Query Frame = 0


Query: 1   MATVVETSEEDAALTVVRFVSELAWADAGPEAAEPQVNRLCVEAQECMVMGRWVDLASLM 60
           MATVVETSEEDAALTVVRF SELAWADAGPEAAEPQVNRLCVEAQECMVMGRWVDLASLM
Sbjct: 1   MATVVETSEEDAALTVVRFASELAWADAGPEAAEPQVNRLCVEAQECMVMGRWVDLASLM 60

Query: 61  LASTDVIFSKVSEKDLECVFTIICNLVTKSGNPDESFEIAKVISAKIGQQPNDKPALRLK 120
           LASTDVIFSKVSEKDLECVFTIICNLVTKSGNPDESFEI KVISAKIGQQPNDKPALRLK
Sbjct: 61  LASTDVIFSKVSEKDLECVFTIICNLVTKSGNPDESFEIVKVISAKIGQQPNDKPALRLK 120

Query: 121 ILFNLYNLLENPYSRFYVYMKALDLSLKGKVPEHIIPSLKKIDSFLREWNIGIIEQRELF 180
           ILFNLYNLLENPYSRFYVYMKALDLSLKGKVPEHIIPSLKKIDSFLREWNIGIIEQRELF
Sbjct: 121 ILFNLYNLLENPYSRFYVYMKALDLSLKGKVPEHIIPSLKKIDSFLREWNIGIIEQRELF 180

Query: 181 LAISDVLKGSKSSANDYFKFLTKYLATFTGEDDLNEAKEEAAHAIVEFIKAPNLFKCDLL 240
           LAISDVLKGSKSSANDYFKFLTKYLATFTGEDDLNEAKEEAAHAIVEFIKAPNLFKCDLL
Sbjct: 181 LAISDVLKGSKSSANDYFKFLTKYLATFTGEDDLNEAKEEAAHAIVEFIKAPNLFKCDLL 240

Query: 241 DMPAVGQLEKDPKYSLVYQLLKIFLTQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMRLL 300
           DMPAVGQLEKDPK SLVYQLLKIFLTQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMRLL
Sbjct: 241 DMPAVGQLEKDPKSSLVYQLLKIFLTQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMRLL 300

Query: 301 SLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAITSKLIDCKMDQMNGVVIVSRCSD 360
           SLVDLGSNESA IPYALIKDTLRI DDEVELWVVKAITSKLIDCKMDQMN VVIVSRCSD
Sbjct: 301 SLVDLGSNESAPIPYALIKDTLRIKDDEVELWVVKAITSKLIDCKMDQMNEVVIVSRCSD 360

Query: 361 RVFGQHQWETLRMKLATWRGNIANVIGTIRANKVVEDGSQGVQGLAIR 408
           RVFGQHQWETLRMKLATWRGNIANVIGTIRANKVVEDGSQGVQGLAIR
Sbjct: 361 RVFGQHQWETLRMKLATWRGNIANVIGTIRANKVVEDGSQGVQGLAIR 408

[Close]

BLAST of Cp4.1LG13g08180 vs. NCBI nr
Match: TYK00620.1 (eukaryotic translation initiation factor 3 subunit M [Cucumis melo var. makuwa])

HSP 1 Score: 729 bits (1881), Expect = 1.28e-263
Identity = 369/410 (90.00%), Postives = 392/410 (95.61%), Query Frame = 0


Query: 1   MATVVETSEEDAALTVVRFVSELAWADAGPEAAEPQVNRLCVEAQECMVMGRWVDLASLM 60
           MATVV+TSEEDAALTVVRF SELAWADAGPE AEPQVNRLCVEAQECMVMGRW+DLASLM
Sbjct: 1   MATVVQTSEEDAALTVVRFASELAWADAGPETAEPQVNRLCVEAQECMVMGRWLDLASLM 60

Query: 61  LASTDVIFSKVSEKDLECVFTIICNLVTKSGNPDESFEIAKVISAKIGQQPNDKPALRLK 120
           L S D+IFSKVSEKDLECVFTIICNLVTK+G+PDES E+AK+ISAKI QQPNDKPALRLK
Sbjct: 61  LTSADLIFSKVSEKDLECVFTIICNLVTKAGSPDESLEMAKLISAKICQQPNDKPALRLK 120

Query: 121 ILFNLYNLLENPYSRFYVYMKALDLSLKGKVPEHIIPSLKKIDSFLREWNIGIIEQRELF 180
           ILFNLYNLLENPYSRF+VYMKALDL+ KGK PEHIIP+LKKI+SFLREWNIGI+EQRELF
Sbjct: 121 ILFNLYNLLENPYSRFHVYMKALDLAFKGKAPEHIIPTLKKIESFLREWNIGIVEQRELF 180

Query: 181 LAISDVLKGSKSSANDYFKFLTKYLATFTGED--DLNEAKEEAAHAIVEFIKAPNLFKCD 240
           LAIS+VLK SKSSANDYFKFLTKYLATF+GED   L+EAKEEA HAIVEF+KAPN+FKCD
Sbjct: 181 LAISNVLKESKSSANDYFKFLTKYLATFSGEDASTLSEAKEEAVHAIVEFVKAPNMFKCD 240

Query: 241 LLDMPAVGQLEKDPKYSLVYQLLKIFLTQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMR 300
           LLDMPAVGQLEKD KYSLVYQLLKIFLTQRLDAY+EFQAANS+LLKSYGLVHEDCIAKMR
Sbjct: 241 LLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMR 300

Query: 301 LLSLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAITSKLIDCKMDQMNGVVIVSRC 360
           LLSLVDLGSNESARIPYALIKDTL+INDDEVELWVVKAITSKLIDCKMDQMN VVIVSRC
Sbjct: 301 LLSLVDLGSNESARIPYALIKDTLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIVSRC 360

Query: 361 SDRVFGQHQWETLRMKLATWRGNIANVIGTIRANKVVEDGSQGVQGLAIR 408
           +DRVFGQHQWETLR KL TWRGNIANVIGTIRANK+VEDGSQ +QGLAIR
Sbjct: 361 TDRVFGQHQWETLRTKLTTWRGNIANVIGTIRANKIVEDGSQAMQGLAIR 410

[Close]

BLAST of Cp4.1LG13g08180 vs. ExPASy TrEMBL
Match: A0A6J1FEM3 (Eukaryotic translation initiation factor 3 subunit M OS=Cucurbita moschata OX=3662 GN=LOC111445032 PE=3 SV=1)

HSP 1 Score: 791 bits (2044), Expect = 8.30e-289
Identity = 406/408 (99.51%), Postives = 406/408 (99.51%), Query Frame = 0


Query: 1   MATVVETSEEDAALTVVRFVSELAWADAGPEAAEPQVNRLCVEAQECMVMGRWVDLASLM 60
           MATVVETSEEDAALTVVRFVSELAWADAGPEAAEPQVNRLCVEAQECMVMGRWVDLASLM
Sbjct: 1   MATVVETSEEDAALTVVRFVSELAWADAGPEAAEPQVNRLCVEAQECMVMGRWVDLASLM 60

Query: 61  LASTDVIFSKVSEKDLECVFTIICNLVTKSGNPDESFEIAKVISAKIGQQPNDKPALRLK 120
           LASTDVIFSKVSEKDLECVFTIICNLVTKSGNPDESFEIAKVISAKIGQQPNDKPALRLK
Sbjct: 61  LASTDVIFSKVSEKDLECVFTIICNLVTKSGNPDESFEIAKVISAKIGQQPNDKPALRLK 120

Query: 121 ILFNLYNLLENPYSRFYVYMKALDLSLKGKVPEHIIPSLKKIDSFLREWNIGIIEQRELF 180
           ILFNLYNLLENPYSRFYVYMKALDLSLKGKVPEHIIPSLKKIDSFLREWNIGIIEQRELF
Sbjct: 121 ILFNLYNLLENPYSRFYVYMKALDLSLKGKVPEHIIPSLKKIDSFLREWNIGIIEQRELF 180

Query: 181 LAISDVLKGSKSSANDYFKFLTKYLATFTGEDDLNEAKEEAAHAIVEFIKAPNLFKCDLL 240
           LAISDVLKGSKSSANDYFKFLTKYLATFTGEDDLNEAKEEAAHAIVEFIKAPNLFKCDLL
Sbjct: 181 LAISDVLKGSKSSANDYFKFLTKYLATFTGEDDLNEAKEEAAHAIVEFIKAPNLFKCDLL 240

Query: 241 DMPAVGQLEKDPKYSLVYQLLKIFLTQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMRLL 300
           DMPAVGQLEKDPKYSLVYQLLKIFLTQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMRLL
Sbjct: 241 DMPAVGQLEKDPKYSLVYQLLKIFLTQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMRLL 300

Query: 301 SLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAITSKLIDCKMDQMNGVVIVSRCSD 360
           SLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAITSKLIDCKMDQMN VVIVSRCSD
Sbjct: 301 SLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAITSKLIDCKMDQMNEVVIVSRCSD 360

Query: 361 RVFGQHQWETLRMKLATWRGNIANVIGTIRANKVVEDGSQGVQGLAIR 408
           RVFGQHQWETLR KLATWRGNIANVIGTIRANKVVEDGSQGVQGLAIR
Sbjct: 361 RVFGQHQWETLRTKLATWRGNIANVIGTIRANKVVEDGSQGVQGLAIR 408

[Close]

BLAST of Cp4.1LG13g08180 vs. ExPASy TrEMBL
Match: A0A6J1JZ09 (Eukaryotic translation initiation factor 3 subunit M OS=Cucurbita maxima OX=3661 GN=LOC111489554 PE=3 SV=1)

HSP 1 Score: 782 bits (2020), Expect = 3.78e-285
Identity = 402/408 (98.53%), Postives = 402/408 (98.53%), Query Frame = 0


Query: 1   MATVVETSEEDAALTVVRFVSELAWADAGPEAAEPQVNRLCVEAQECMVMGRWVDLASLM 60
           MATVVETSEEDAALTVVRF SELAWADAGPEAAEPQVNRLCVEAQECMVMGRWVDLASLM
Sbjct: 1   MATVVETSEEDAALTVVRFASELAWADAGPEAAEPQVNRLCVEAQECMVMGRWVDLASLM 60

Query: 61  LASTDVIFSKVSEKDLECVFTIICNLVTKSGNPDESFEIAKVISAKIGQQPNDKPALRLK 120
           LASTDVIFSKVSEKDLECVFTIICNLVTKSGNPDESFEI KVISAKIGQQPNDKPALRLK
Sbjct: 61  LASTDVIFSKVSEKDLECVFTIICNLVTKSGNPDESFEIVKVISAKIGQQPNDKPALRLK 120

Query: 121 ILFNLYNLLENPYSRFYVYMKALDLSLKGKVPEHIIPSLKKIDSFLREWNIGIIEQRELF 180
           ILFNLYNLLENPYSRFYVYMKALDLSLKGKVPEHIIPSLKKIDSFLREWNIGIIEQRELF
Sbjct: 121 ILFNLYNLLENPYSRFYVYMKALDLSLKGKVPEHIIPSLKKIDSFLREWNIGIIEQRELF 180

Query: 181 LAISDVLKGSKSSANDYFKFLTKYLATFTGEDDLNEAKEEAAHAIVEFIKAPNLFKCDLL 240
           LAISDVLKGSKSSANDYFKFLTKYLATFTGEDDLNEAKEEAAHAIVEFIKAPNLFKCDLL
Sbjct: 181 LAISDVLKGSKSSANDYFKFLTKYLATFTGEDDLNEAKEEAAHAIVEFIKAPNLFKCDLL 240

Query: 241 DMPAVGQLEKDPKYSLVYQLLKIFLTQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMRLL 300
           DMPAVGQLEKDPK SLVYQLLKIFLTQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMRLL
Sbjct: 241 DMPAVGQLEKDPKSSLVYQLLKIFLTQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMRLL 300

Query: 301 SLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAITSKLIDCKMDQMNGVVIVSRCSD 360
           SLVDLGSNESA IPYALIKDTLRI DDEVELWVVKAITSKLIDCKMDQMN VVIVSRCSD
Sbjct: 301 SLVDLGSNESAPIPYALIKDTLRIKDDEVELWVVKAITSKLIDCKMDQMNEVVIVSRCSD 360

Query: 361 RVFGQHQWETLRMKLATWRGNIANVIGTIRANKVVEDGSQGVQGLAIR 408
           RVFGQHQWETLRMKLATWRGNIANVIGTIRANKVVEDGSQGVQGLAIR
Sbjct: 361 RVFGQHQWETLRMKLATWRGNIANVIGTIRANKVVEDGSQGVQGLAIR 408

[Close]

BLAST of Cp4.1LG13g08180 vs. ExPASy TrEMBL
Match: A0A5D3BNN4 (Eukaryotic translation initiation factor 3 subunit M OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002400 PE=3 SV=1)

HSP 1 Score: 729 bits (1881), Expect = 6.18e-264
Identity = 369/410 (90.00%), Postives = 392/410 (95.61%), Query Frame = 0


Query: 1   MATVVETSEEDAALTVVRFVSELAWADAGPEAAEPQVNRLCVEAQECMVMGRWVDLASLM 60
           MATVV+TSEEDAALTVVRF SELAWADAGPE AEPQVNRLCVEAQECMVMGRW+DLASLM
Sbjct: 1   MATVVQTSEEDAALTVVRFASELAWADAGPETAEPQVNRLCVEAQECMVMGRWLDLASLM 60

Query: 61  LASTDVIFSKVSEKDLECVFTIICNLVTKSGNPDESFEIAKVISAKIGQQPNDKPALRLK 120
           L S D+IFSKVSEKDLECVFTIICNLVTK+G+PDES E+AK+ISAKI QQPNDKPALRLK
Sbjct: 61  LTSADLIFSKVSEKDLECVFTIICNLVTKAGSPDESLEMAKLISAKICQQPNDKPALRLK 120

Query: 121 ILFNLYNLLENPYSRFYVYMKALDLSLKGKVPEHIIPSLKKIDSFLREWNIGIIEQRELF 180
           ILFNLYNLLENPYSRF+VYMKALDL+ KGK PEHIIP+LKKI+SFLREWNIGI+EQRELF
Sbjct: 121 ILFNLYNLLENPYSRFHVYMKALDLAFKGKAPEHIIPTLKKIESFLREWNIGIVEQRELF 180

Query: 181 LAISDVLKGSKSSANDYFKFLTKYLATFTGED--DLNEAKEEAAHAIVEFIKAPNLFKCD 240
           LAIS+VLK SKSSANDYFKFLTKYLATF+GED   L+EAKEEA HAIVEF+KAPN+FKCD
Sbjct: 181 LAISNVLKESKSSANDYFKFLTKYLATFSGEDASTLSEAKEEAVHAIVEFVKAPNMFKCD 240

Query: 241 LLDMPAVGQLEKDPKYSLVYQLLKIFLTQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMR 300
           LLDMPAVGQLEKD KYSLVYQLLKIFLTQRLDAY+EFQAANS+LLKSYGLVHEDCIAKMR
Sbjct: 241 LLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMR 300

Query: 301 LLSLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAITSKLIDCKMDQMNGVVIVSRC 360
           LLSLVDLGSNESARIPYALIKDTL+INDDEVELWVVKAITSKLIDCKMDQMN VVIVSRC
Sbjct: 301 LLSLVDLGSNESARIPYALIKDTLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIVSRC 360

Query: 361 SDRVFGQHQWETLRMKLATWRGNIANVIGTIRANKVVEDGSQGVQGLAIR 408
           +DRVFGQHQWETLR KL TWRGNIANVIGTIRANK+VEDGSQ +QGLAIR
Sbjct: 361 TDRVFGQHQWETLRTKLTTWRGNIANVIGTIRANKIVEDGSQAMQGLAIR 410

[Close]

BLAST of Cp4.1LG13g08180 vs. ExPASy TrEMBL
Match: A0A1S3CA60 (Eukaryotic translation initiation factor 3 subunit M OS=Cucumis melo OX=3656 GN=LOC103498537 PE=3 SV=1)

HSP 1 Score: 727 bits (1876), Expect = 3.57e-263
Identity = 368/410 (89.76%), Postives = 391/410 (95.37%), Query Frame = 0


Query: 1   MATVVETSEEDAALTVVRFVSELAWADAGPEAAEPQVNRLCVEAQECMVMGRWVDLASLM 60
           MATVV+TSEEDAALTVVRF SELAWADAGPE AEPQVNRLCVEAQECMVMGRW+DLASLM
Sbjct: 1   MATVVQTSEEDAALTVVRFASELAWADAGPETAEPQVNRLCVEAQECMVMGRWLDLASLM 60

Query: 61  LASTDVIFSKVSEKDLECVFTIICNLVTKSGNPDESFEIAKVISAKIGQQPNDKPALRLK 120
           L S D+IFSKVSEKDLECVFTIICNLVTK+G+PDES E+AK+ISAKI QQPNDKPALRLK
Sbjct: 61  LTSADLIFSKVSEKDLECVFTIICNLVTKAGSPDESLEMAKLISAKICQQPNDKPALRLK 120

Query: 121 ILFNLYNLLENPYSRFYVYMKALDLSLKGKVPEHIIPSLKKIDSFLREWNIGIIEQRELF 180
           ILFNLYNLLENPYSRF+VYMKALDL+ KGK PEHIIP+LKKI+SFLREWNIGI+EQRELF
Sbjct: 121 ILFNLYNLLENPYSRFHVYMKALDLAFKGKAPEHIIPTLKKIESFLREWNIGIVEQRELF 180

Query: 181 LAISDVLKGSKSSANDYFKFLTKYLATFTGED--DLNEAKEEAAHAIVEFIKAPNLFKCD 240
           LAIS+VLK SKSSANDYFKFLTKYLATF+GED   L+EAKEEA HAIVEF+KAPN+FKCD
Sbjct: 181 LAISNVLKESKSSANDYFKFLTKYLATFSGEDASTLSEAKEEAVHAIVEFVKAPNMFKCD 240

Query: 241 LLDMPAVGQLEKDPKYSLVYQLLKIFLTQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMR 300
           LLDMPAVGQLEKD KYSLVYQLLKIFLTQRLDAY+EFQAANS+LLKSYGLVHEDCIAKMR
Sbjct: 241 LLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMR 300

Query: 301 LLSLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAITSKLIDCKMDQMNGVVIVSRC 360
           LLSLVDLGSNESARIPYALIKDTL+ NDDEVELWVVKAITSKLIDCKMDQMN VVIVSRC
Sbjct: 301 LLSLVDLGSNESARIPYALIKDTLQTNDDEVELWVVKAITSKLIDCKMDQMNEVVIVSRC 360

Query: 361 SDRVFGQHQWETLRMKLATWRGNIANVIGTIRANKVVEDGSQGVQGLAIR 408
           +DRVFGQHQWETLR KL TWRGNIANVIGTIRANK+VEDGSQ +QGLAIR
Sbjct: 361 TDRVFGQHQWETLRTKLTTWRGNIANVIGTIRANKIVEDGSQAMQGLAIR 410

[Close]

BLAST of Cp4.1LG13g08180 vs. ExPASy TrEMBL
Match: A0A0A0KXL1 (Eukaryotic translation initiation factor 3 subunit M OS=Cucumis sativus OX=3659 GN=Csa_5G640010 PE=3 SV=1)

HSP 1 Score: 726 bits (1873), Expect = 1.02e-262
Identity = 367/410 (89.51%), Postives = 391/410 (95.37%), Query Frame = 0


Query: 1   MATVVETSEEDAALTVVRFVSELAWADAGPEAAEPQVNRLCVEAQECMVMGRWVDLASLM 60
           MATVV+TSEEDAALTVVRF SELAWADAGPE AEPQVNRLCVEAQECMV+GRW+DLASLM
Sbjct: 1   MATVVQTSEEDAALTVVRFASELAWADAGPETAEPQVNRLCVEAQECMVIGRWLDLASLM 60

Query: 61  LASTDVIFSKVSEKDLECVFTIICNLVTKSGNPDESFEIAKVISAKIGQQPNDKPALRLK 120
           L S D+IFSKVSEKDLECVFTIICNLVTK+G+PDES E+AK+ISAKI QQPNDKPALRLK
Sbjct: 61  LTSADLIFSKVSEKDLECVFTIICNLVTKAGSPDESLEMAKLISAKICQQPNDKPALRLK 120

Query: 121 ILFNLYNLLENPYSRFYVYMKALDLSLKGKVPEHIIPSLKKIDSFLREWNIGIIEQRELF 180
           ILFNLYNLLENPYSRF+VYMKALDL+ KGK PEHIIP+LKKI+SFLREWNIGI+EQRELF
Sbjct: 121 ILFNLYNLLENPYSRFHVYMKALDLAFKGKAPEHIIPTLKKIESFLREWNIGIVEQRELF 180

Query: 181 LAISDVLKGSKSSANDYFKFLTKYLATFTGED--DLNEAKEEAAHAIVEFIKAPNLFKCD 240
           LAIS+VLK SKSSANDYFKFLTKYLATF+GED   L+EAKEEA HAIVEF+KAPN+FKCD
Sbjct: 181 LAISNVLKESKSSANDYFKFLTKYLATFSGEDASTLSEAKEEAVHAIVEFVKAPNMFKCD 240

Query: 241 LLDMPAVGQLEKDPKYSLVYQLLKIFLTQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMR 300
           LLDMPAVGQLEKD KYSLVYQLLKIFLTQRLDAY+EFQA NS+LLKSYGLVHEDCIAKMR
Sbjct: 241 LLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQATNSSLLKSYGLVHEDCIAKMR 300

Query: 301 LLSLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAITSKLIDCKMDQMNGVVIVSRC 360
           LLSLVDLGSNESARIPYALIKDTL+INDDEVELWVVKAITSKLIDCKMDQMN VVIVSRC
Sbjct: 301 LLSLVDLGSNESARIPYALIKDTLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIVSRC 360

Query: 361 SDRVFGQHQWETLRMKLATWRGNIANVIGTIRANKVVEDGSQGVQGLAIR 408
           +DRVFGQHQWETLR KL TWRGNIANVIGTIRANK+VEDGSQ +QGLAIR
Sbjct: 361 TDRVFGQHQWETLRTKLTTWRGNIANVIGTIRANKIVEDGSQAMQGLAIR 410

[Close]

BLAST of Cp4.1LG13g08180 vs. TAIR 10
Match: AT5G15610.2 (Proteasome component (PCI) domain protein )

HSP 1 Score: 547.7 bits (1410), Expect = 7.7e-156
Identity = 268/413 (64.89%), Postives = 340/413 (82.32%), Query Frame = 0


Query: 1   MATVVETSEEDAALTVVRFVSELAWADAGPEAAEPQVNRLCVEAQECMVMGRWVDLASLM 60
           M T+V TSEED  L +VRF S+LAWADAGPE AEP+V+RLC EA+E ++ G+W+DLA+LM
Sbjct: 1   MTTIVPTSEEDPYLAIVRFTSQLAWADAGPEVAEPEVSRLCKEAEESIINGKWLDLATLM 60

Query: 61  LASTDVIFSKVSEKDLECVFTIICNLVTKSGNPDESFEIAKVISAKIGQQPNDKPALRLK 120
           + S D++ +K+SEKDLEC +TIICNLV  + +P+E  E+ K I+AK+ QQPNDK +LRLK
Sbjct: 61  VTSADLVSAKISEKDLECTYTIICNLVKNANSPEEVLEMVKAIAAKVIQQPNDKASLRLK 120

Query: 121 ILFNLYNLLENPYSRFYVYMKALDLSLKGKVPEHIIPSLKKIDSFLREWNIGIIEQRELF 180
           ILFNLYNL+++P +RF VYMKAL+L++ GKV E+I+PS KKIDSFL+EWNI I +QRELF
Sbjct: 121 ILFNLYNLVDHPNARFQVYMKALELAVNGKVTEYIVPSFKKIDSFLKEWNIDIKDQRELF 180

Query: 181 LAISDVLKGSKSSANDYFKFLTKYLATFTGEDD--LNEAKEEAAHAIVEFIKAPNLFKCD 240
           LAI+ VL+ +KS A +  +F+T YLATF+ ED   L+EAKEEA  A++EF+KAP++F+CD
Sbjct: 181 LAIAKVLRENKSFAKESLQFVTNYLATFSNEDTQVLSEAKEEAVRAVIEFVKAPSIFQCD 240

Query: 241 LLDMPAVGQLEKDPKYSLVYQLLKIFLTQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMR 300
           LLD PAV QLEKDP  + VYQLLKIFLTQRLDAY+EFQ ANS  L++YGLV EDC+AKMR
Sbjct: 241 LLDHPAVAQLEKDPNNAPVYQLLKIFLTQRLDAYMEFQNANSGFLQTYGLVEEDCVAKMR 300

Query: 301 LLSLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAITSKLIDCKMDQMNGVVIVSRC 360
           LLSLVDL S++S +IPYA IK+TL++ND+EVELWVVKAIT+KL+ CKMDQMN VVIVSRC
Sbjct: 301 LLSLVDLASDDSGKIPYASIKNTLQVNDEEVELWVVKAITAKLVACKMDQMNQVVIVSRC 360

Query: 361 SDRVFGQHQWETLRMKLATWRGNIANVIGTIRANKVVEDGSQ---GVQGLAIR 409
           ++R FGQ QW++LR KLA WR N+ NVI TI +NK  E+G+Q     QGL +R
Sbjct: 361 AEREFGQKQWQSLRTKLAAWRDNVRNVISTIESNKATEEGTQTSSAAQGLTVR 413

[Close]

BLAST of Cp4.1LG13g08180 vs. TAIR 10
Match: AT3G02200.2 (Proteasome component (PCI) domain protein )

HSP 1 Score: 532.7 bits (1371), Expect = 2.6e-151
Identity = 262/417 (62.83%), Postives = 341/417 (81.77%), Query Frame = 0


Query: 1   MATVVETSEEDAALTVVRFVSELAWADAGPEAAEPQVNRLCVEAQECMVMGRWVDLASLM 60
           M T+V TSEE+  L VVRF S+LAWADAGPEAAEP++ RLC EA+E MV  +W++L+SLM
Sbjct: 1   MTTIVPTSEENPFLAVVRFTSQLAWADAGPEAAEPEITRLCREAEESMVAEKWLELSSLM 60

Query: 61  LASTDVIFSKVSEKDLECVFTIICNLVTKSGNPDESFEIAKVISAKIGQQPNDKPALRLK 120
           + S +++ SK+SEKDLEC +TIIC++V  + +P++  E+ K I++K+ QQP+DK +LRLK
Sbjct: 61  VTSAELVSSKISEKDLECTYTIICSIVKNAKSPEQVLEMVKAIASKVAQQPSDKASLRLK 120

Query: 121 ILFNLYNLLENPYSRFYVYMKALDLSLKGKVPEHIIPSLKKIDSFLREWNIGIIEQRELF 180
           ILFNLYNL+++PY+RF VYMKAL L++ GKV E+I+ S KKID+FL+EWNI I +QRELF
Sbjct: 121 ILFNLYNLVDHPYARFQVYMKALTLAVDGKVTEYIVSSFKKIDNFLKEWNIDIKDQRELF 180

Query: 181 LAISDVLKGSKSSANDYFKFLTKYLATFTGEDD--LNEAKEEAAHAIVEFIKAPNLFKCD 240
           LAI++VLK +KS  N+  KFLTKYLATF+ ED   L+EAKEEA  A++EF+KA ++F+CD
Sbjct: 181 LAIANVLKENKSLVNESLKFLTKYLATFSNEDAQVLDEAKEEAVRAVIEFVKASSIFQCD 240

Query: 241 LLDMPAVGQLEKDPKYSLVYQLLKIFLTQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMR 300
           LLD+PAV QLEKD KY+ VYQLLKIFLTQRL+AY EFQ ANS  L+SYGL +EDC+ KMR
Sbjct: 241 LLDLPAVAQLEKDAKYAPVYQLLKIFLTQRLNAYTEFQNANSGFLQSYGLSNEDCVTKMR 300

Query: 301 LLSLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAITSKLIDCKMDQMNGVVIVSRC 360
           LLSLVDL S+ES +IPY  IKDTL++N+ +VELW+VKAIT+KLI+CKMDQMN V+IVSR 
Sbjct: 301 LLSLVDLASDESGKIPYTSIKDTLQVNEQDVELWIVKAITAKLIECKMDQMNQVLIVSRS 360

Query: 361 SDRVFGQHQWETLRMKLATWRGNIANVIGTIRANKVVEDGSQ-------GVQGLAIR 409
           S+R FG  QW++LR KLATW+ NI+++I TI +NKV E+GSQ        +QGL++R
Sbjct: 361 SEREFGTKQWQSLRTKLATWKDNISSIITTIESNKVTEEGSQASSSSAAAIQGLSVR 417

[Close]

BLAST of Cp4.1LG13g08180 vs. TAIR 10
Match: AT5G15610.1 (Proteasome component (PCI) domain protein )

HSP 1 Score: 532.3 bits (1370), Expect = 3.3e-151
Identity = 268/442 (60.63%), Postives = 340/442 (76.92%), Query Frame = 0


Query: 1   MATVVETSEEDAALTVVRFVSELAWADAGPEAAEPQVNRLCVEAQECMVMGRWVDLASLM 60
           M T+V TSEED  L +VRF S+LAWADAGPE AEP+V+RLC EA+E ++ G+W+DLA+LM
Sbjct: 1   MTTIVPTSEEDPYLAIVRFTSQLAWADAGPEVAEPEVSRLCKEAEESIINGKWLDLATLM 60

Query: 61  LASTDVIFSKVSEKDLECVFTIICNLVTKSGNPDESFEIAKVISAKIGQQPNDKPALRLK 120
           + S D++ +K+SEKDLEC +TIICNLV  + +P+E  E+ K I+AK+ QQPNDK +LRLK
Sbjct: 61  VTSADLVSAKISEKDLECTYTIICNLVKNANSPEEVLEMVKAIAAKVIQQPNDKASLRLK 120

Query: 121 ILFNLYNLLENPYSRFYVYMKALDLSLKGKVPEHIIPSLKKIDSFLREWNIGIIEQRELF 180
           ILFNLYNL+++P +RF VYMKAL+L++ GKV E+I+PS KKIDSFL+EWNI I +QRELF
Sbjct: 121 ILFNLYNLVDHPNARFQVYMKALELAVNGKVTEYIVPSFKKIDSFLKEWNIDIKDQRELF 180

Query: 181 LAISDVLKGSKSSANDYFKFLTKYLATFTGEDD--LNEAKEEAAHAIVEFIKAPNLFKCD 240
           LAI+ VL+ +KS A +  +F+T YLATF+ ED   L+EAKEEA  A++EF+KAP++F+CD
Sbjct: 181 LAIAKVLRENKSFAKESLQFVTNYLATFSNEDTQVLSEAKEEAVRAVIEFVKAPSIFQCD 240

Query: 241 LLDMPAVGQLEKDPKYSLVYQLLKIFLTQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMR 300
           LLD PAV QLEKDP  + VYQLLKIFLTQRLDAY+EFQ ANS  L++YGLV EDC+AKMR
Sbjct: 241 LLDHPAVAQLEKDPNNAPVYQLLKIFLTQRLDAYMEFQNANSGFLQTYGLVEEDCVAKMR 300

Query: 301 LLSLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAITSKLIDCKMDQMNGVVIV--- 360
           LLSLVDL S++S +IPYA IK+TL++ND+EVELWVVKAIT+KL+ CKMDQMN VVIV   
Sbjct: 301 LLSLVDLASDDSGKIPYASIKNTLQVNDEEVELWVVKAITAKLVACKMDQMNQVVIVRQV 360

Query: 361 --------------------------SRCSDRVFGQHQWETLRMKLATWRGNIANVIGTI 409
                                     SRC++R FGQ QW++LR KLA WR N+ NVI TI
Sbjct: 361 SNLLLFRFICVNPKSHILVLHICSCISRCAEREFGQKQWQSLRTKLAAWRDNVRNVISTI 420

[Close]

BLAST of Cp4.1LG13g08180 vs. TAIR 10
Match: AT3G02200.1 (Proteasome component (PCI) domain protein )

HSP 1 Score: 471.1 bits (1211), Expect = 9.1e-133
Identity = 231/357 (64.71%), Postives = 298/357 (83.47%), Query Frame = 0


Query: 1   MATVVETSEEDAALTVVRFVSELAWADAGPEAAEPQVNRLCVEAQECMVMGRWVDLASLM 60
           M T+V TSEE+  L VVRF S+LAWADAGPEAAEP++ RLC EA+E MV  +W++L+SLM
Sbjct: 1   MTTIVPTSEENPFLAVVRFTSQLAWADAGPEAAEPEITRLCREAEESMVAEKWLELSSLM 60

Query: 61  LASTDVIFSKVSEKDLECVFTIICNLVTKSGNPDESFEIAKVISAKIGQQPNDKPALRLK 120
           + S +++ SK+SEKDLEC +TIIC++V  + +P++  E+ K I++K+ QQP+DK +LRLK
Sbjct: 61  VTSAELVSSKISEKDLECTYTIICSIVKNAKSPEQVLEMVKAIASKVAQQPSDKASLRLK 120

Query: 121 ILFNLYNLLENPYSRFYVYMKALDLSLKGKVPEHIIPSLKKIDSFLREWNIGIIEQRELF 180
           ILFNLYNL+++PY+RF VYMKAL L++ GKV E+I+ S KKID+FL+EWNI I +QRELF
Sbjct: 121 ILFNLYNLVDHPYARFQVYMKALTLAVDGKVTEYIVSSFKKIDNFLKEWNIDIKDQRELF 180

Query: 181 LAISDVLKGSKSSANDYFKFLTKYLATFTGEDD--LNEAKEEAAHAIVEFIKAPNLFKCD 240
           LAI++VLK +KS  N+  KFLTKYLATF+ ED   L+EAKEEA  A++EF+KA ++F+CD
Sbjct: 181 LAIANVLKENKSLVNESLKFLTKYLATFSNEDAQVLDEAKEEAVRAVIEFVKASSIFQCD 240

Query: 241 LLDMPAVGQLEKDPKYSLVYQLLKIFLTQRLDAYLEFQAANSTLLKSYGLVHEDCIAKMR 300
           LLD+PAV QLEKD KY+ VYQLLKIFLTQRL+AY EFQ ANS  L+SYGL +EDC+ KMR
Sbjct: 241 LLDLPAVAQLEKDAKYAPVYQLLKIFLTQRLNAYTEFQNANSGFLQSYGLSNEDCVTKMR 300

Query: 301 LLSLVDLGSNESARIPYALIKDTLRINDDEVELWVVKAITSKLIDCKMDQMNGVVIV 356
           LLSLVDL S+ES +IPY  IKDTL++N+ +VELW+VKAIT+KLI+CKMDQMN V+IV
Sbjct: 301 LLSLVDLASDESGKIPYTSIKDTLQVNEQDVELWIVKAITAKLIECKMDQMNQVLIV 357

[Close]

BLAST of Cp4.1LG13g08180 vs. TAIR 10
Match: AT5G45620.1 (Proteasome component (PCI) domain protein )

HSP 1 Score: 59.7 bits (143), Expect = 6.3e-09
Identity = 54/221 (24.43%), Postives = 108/221 (48.87%), Query Frame = 0


Query: 180 FLAISDVLKGSKSSANDYFKFLTKYLATFTGEDDLNEA--KEEAAHAIVEFIKAPNLFKC 239
           F  +S      +   +D++K    YLA +T  +DL+E+   + A    +  +   N++  
Sbjct: 160 FYWVSSQYHKCRQEFSDFYKSALLYLA-YTSVEDLSESFKLDLAFDLSLSALLGENIYNF 219

Query: 240 -DLLDMPAVGQLEKDPKYSLVYQLLKIFLTQRLDAYLEF-QAANSTLLKSYGLVHED--C 299
            +LL  P +  L        +Y +L+ F    L  Y E  +  N++L+    LV  +   
Sbjct: 220 GELLAHPILKSL-LGTNVEWLYHILQAFNHGDLVQYQELCRVHNASLIAQPALVENEKKL 279

Query: 300 IAKMRLLSLVDL---GSNESARIPYALIKDTLRINDDEVELWVVKAITSKLIDCKMDQMN 359
           + K+ +L L+++      E   IP ++I +  +++ ++VE  ++K+++  LI+  +DQ+N
Sbjct: 280 LEKINILCLIEIIFSRPAEDRTIPLSIIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVN 339

Query: 360 GVVIVSRCSDRVFGQHQWETLRMKLATWRGNIANVIGTIRA 392
           G + VS    RV G  Q + LR +L +W   +   + ++ A
Sbjct: 340 GTIYVSWAQPRVLGIPQIKALRDQLDSWVDKVHTTLLSVEA 378

The following BLAST results are available for this feature:

BLAST of Cp4.1LG13g08180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54KZ8	3.3e-55	34.87	Eukaryotic translation initiation factor 3 subunit M OS=Dictyostelium discoideum...	[more]
Q5ZJ64	2.9e-35	31.07	Eukaryotic translation initiation factor 3 subunit M OS=Gallus gallus OX=9031 GN...	[more]
Q7L2H7	7.3e-34	29.59	Eukaryotic translation initiation factor 3 subunit M OS=Homo sapiens OX=9606 GN=...	[more]
Q5R8C4	9.5e-34	29.29	Eukaryotic translation initiation factor 3 subunit M OS=Pongo abelii OX=9601 GN=...	[more]
A7SPX9	1.6e-33	27.23	Eukaryotic translation initiation factor 3 subunit M OS=Nematostella vectensis O...	[more]

BLAST of Cp4.1LG13g08180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023549625.1	1.26e-290	100.00	eukaryotic translation initiation factor 3 subunit M-like [Cucurbita pepo subsp....	[more]
XP_022938986.1	1.71e-288	99.51	eukaryotic translation initiation factor 3 subunit M-like [Cucurbita moschata] >...	[more]
KAG7016108.1	2.84e-287	99.26	Eukaryotic translation initiation factor 3 subunit M, partial [Cucurbita argyros...	[more]
XP_022993614.1	7.80e-285	98.53	eukaryotic translation initiation factor 3 subunit M-like [Cucurbita maxima] >XP...	[more]
TYK00620.1	1.28e-263	90.00	eukaryotic translation initiation factor 3 subunit M [Cucumis melo var. makuwa]	[more]

BLAST of Cp4.1LG13g08180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FEM3	8.30e-289	99.51	Eukaryotic translation initiation factor 3 subunit M OS=Cucurbita moschata OX=36...	[more]
A0A6J1JZ09	3.78e-285	98.53	Eukaryotic translation initiation factor 3 subunit M OS=Cucurbita maxima OX=3661...	[more]
A0A5D3BNN4	6.18e-264	90.00	Eukaryotic translation initiation factor 3 subunit M OS=Cucumis melo var. makuwa...	[more]
A0A1S3CA60	3.57e-263	89.76	Eukaryotic translation initiation factor 3 subunit M OS=Cucumis melo OX=3656 GN=...	[more]
A0A0A0KXL1	1.02e-262	89.51	Eukaryotic translation initiation factor 3 subunit M OS=Cucumis sativus OX=3659 ...	[more]

BLAST of Cp4.1LG13g08180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G15610.2	7.7e-156	64.89	Proteasome component (PCI) domain protein	[more]
AT3G02200.2	2.6e-151	62.83	Proteasome component (PCI) domain protein	[more]
AT5G15610.1	3.3e-151	60.63	Proteasome component (PCI) domain protein	[more]
AT3G02200.1	9.1e-133	64.71	Proteasome component (PCI) domain protein	[more]
AT5G45620.1	6.3e-09	24.43	Proteasome component (PCI) domain protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000717	Proteasome component (PCI) domain	SMART	SM00088	PINT_4	coord: 288..378 e-value: 1.5E-12 score: 57.7
IPR000717	Proteasome component (PCI) domain	PFAM	PF01399	PCI	coord: 258..357 e-value: 1.9E-13 score: 50.8
IPR000717	Proteasome component (PCI) domain	PROSITE	PS50250	PCI	coord: 193..360 score: 17.702618
None	No IPR available	SMART	SM00753	PINT	coord: 288..378 e-value: 1.5E-12 score: 57.7
None	No IPR available	PANTHER	PTHR15350:SF14	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT M	coord: 1..403
None	No IPR available	PANTHER	PTHR15350	COP9 SIGNALOSOME COMPLEX SUBUNIT 7/DENDRITIC CELL PROTEIN GA17	coord: 1..403
IPR040750	eIF3 subunit M, C-terminal helix domain	PFAM	PF18005	eIF3m_C_helix	coord: 361..389 e-value: 1.6E-12 score: 46.9
IPR027528	Eukaryotic translation initiation factor 3 subunit M	HAMAP	MF_03012	eIF3m	coord: 15..395 score: 21.811913
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 77..285
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 312..360

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG13g08180.1	Cp4.1LG13g08180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001732	formation of cytoplasmic translation initiation complex
cellular_component	GO:0016282	eukaryotic 43S preinitiation complex
cellular_component	GO:0033290	eukaryotic 48S preinitiation complex
cellular_component	GO:0071541	eukaryotic translation initiation factor 3 complex, eIF3m
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0000502	proteasome complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005852	eukaryotic translation initiation factor 3 complex
molecular_function	GO:0003743	translation initiation factor activity