Cp4.1LG13g07830 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG13g07830
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	cyclin-B1-2-like
Location	Cp4.1LG13: 8344311 .. 8348558 (-)
RNA-Seq Expression	Cp4.1LG13g07830
Synteny	Cp4.1LG13g07830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAATTCAAAATAAATTATGATTATTTTGTCAATATTCAAAATTTTCTTCCAAGTCACGGTGTTTTGTATAAATACCAATACTTTACCAATTTTCTGTAGGCAGAGGCACGGCGAGCTCGCGACTTGCAGAACAAGTTTTAAGAAGTTTTCTTGAGCGAAGGGAAAACGAAAATGGAGTCTTCGAAGGCCATTCCCCATGAAATCGGAGGGATCCAGAATGATGCCCTTCGATTTGGGCTCCAAGGCGTGAAGAGCGATCTCGTTGGATCTCATCCTGTTGAATCCATCTATGAAACTGTAATTTCCCCTTTTCCTTCTCTCTCAGTTTTTTCAATCTAAGTTGTCTTACTTGGTTTCTTGGCTTCGGCTGTTTAGTAATTGCCGTTAGACAAGATAATCTGGGTTCGATGGTGCTGATGAACCACTCGTTTGTTTAAGTTACTCGGATTAGAAACTTGTAGCTTCATGTTCTACTTCCTGTTTATTGTTCAAATTTCTCATTGTACTCCCTTATTTTGAAATTCTTGGGGTCTGGTTTTATCAATTGTTGTAAAATGGTGCTGAGAATTTCATTTCAGAGTGATTTATCTAGTGTCCCATTTGACCTCTGTATAGAAAAAACTGAGATTCCACCTCGGTTGAAGGGAGGAACGAAACCTTCTTTCTAAGGGTGTGGAAACCTCTCCCTAGTAGATGCGTTTCAAAACTGTGAGGCCAACAGCGATACGTAACGAGCAAAAGAGGACAATATTTGCTAGCGGTGACTTTGGATTGTTACTAACGGGATTAGAGCTGGACACTGTGAATTGAGAGGTCCTGGAGAAGGGAACAAGTGCCAAGGACGCTGGGTCCTGAAAGGAGTGGATTGTGAGATCCCACATCGGTTGGAGAGGGGAACGAAACATTCTTTGTAAGGGTGTGGAAACCTCTCCCTAGTAGACGAGTTTCAAAACTGTGAGGCCAACAGCGATACGTAACAAGCCAAAGAGGACAATATCTACTGGCAGTGGCCTTGGATTGTTACAAATGGGATTAGAGCTAGACACTATGAATTGAGAGGTCTTGGAGAAGGGAACAAGTGCCAATGAGGACGCTGGGTCTCGAAAGGGGTGAATTGTGAGATGCCACATCAGTTGGAGAGGGAAACGAAGCATTATTTATAAGGGTGTGGAAACCTCTCCTTAGTAGACACGTTTTAAAACTTTGAGGTGGATGAATCACTATACATTCTTTGCTGGGTCTCGAAAGGGGTGGATTGTGAGATGCTACATCAGTTGGAGAGGGAAACGAAGCATTATTTACAAGGGTGTGGAAACCTCTCCTTAGTAGACACGTTTTAAAACCTTGAGGTGGATGAATCACGATACATTCTTTGCTGGGTCTCGAAAGGGGTGGATTGTGAGATGCCACATCAGTTGGAGAGGGAAACGAAGCATTATTTATAAGGGTGTGGAAACCTCTCCTTAGTAGACACGTTTTAAAACTTTGAGGTGGATGAATCACTATACATTCTTTGCTGGGTCTCGAAAGGGGTGGATTGTGAGATGCTACATCAGTTGGAGAGGGAAACGAAGCATTATTTACAAGGGTGTGGAAACCTCTCCTTAGTAGACACGTTTTAAAACCTTGAGGTGGATGAATCACGATACATTCTTTGCTGGGTCTCGAAAGGGGTGGATTGTGAGATGCCACATCAGTTGGAGAGGGAAACGAAGCATTATTTATAAGGGTGTGGAAACCTCTCCTTAGACACGTTTTAAAACCTTGAGGTGGATGAATCACGATACATTCTTTGAATACTTGGGATGAAAAAACAAGCTTGATCATGTTCCTATTTTTTTCTTGATATAGACGAGAAGAACAGAAGAAGAGATGAAAAGGAAAATTCTGGTGAATACATATGGATCTGCTTTTCCATTGAAGATGGATTTTGAGAGGCAAATTCTTTCTCGGTAAGGCCACTCTTCTTGTATTGATGCTGTATCTCTCTTGGTGTGTTCTAAATTGGAGCACTTGTTTATTTTAACTTAAAACTATTGCAGATTTCAAAGGCCTCCAGGACCTATTCCATCTTCAATGTTGGGTTTGGAGGCTCTTACTGGAAGCTTGGATGACTTTGGCTTTGAAGATTATCTAAATGGTAAAATAAATCCATATAACTCATCTGATTCTGTTCTCTATTATACATTTTCATCATTAGGTAGAGCTTTTTCATTGCCTTAAATATTTCTTTTGAGCGTAATGAGTTTTTTTAAGACTATTATTAAGTCACCCAAGTGTCTACATGGTTGAGGAAAGGGGAGGGACCGAGTGATGTAATGTGTAAGGGTCGAAATCCATAGTCGGGTATGTATGTGCTGTGTGATTCTGCGGGGGTGTCACAACGCACTCTTGCGGCTACGGGACAACGATTGTACGACACTTGTTCTAACTCGGCAAACTGTCAGCCGTGAGAAATTCTGACTTCGTAGACTATGACAGCGTATACTAGAGCCTCAGGGCACGTTTAAGAGAAATGTTTGGAAAACGTGAGTGAGGAAATACGTTGAAAACAATTTGAAAGAAAACAATATTATAAGCTAAAAGCGATTAGGCACGACTTTGATAGCATGATTAGTCATATCCCTCTATAGTATATTTTGGGGCATTTTGAGCCCTGAGTGTGAACATGATTTTGGTAACCGGTCATACACCCCCATGTTGACACAACATGAAAGAGTAAAGTTCTATCTAAGATGAAAGCATGCAAAAGGGGTTTGGAATGGACATGCAGCCATGGACAAAACGTCCTGGACAAGCATGACTGGGACATCCGACATAAGGAGGATGAATTGCTTTGGCCATTTTTTCGCCCTTCTTTTTCACGTTGACTTAACATAATGAATCTCAATTGTGCAGTCCATCTGTTGCTTAAAATACCCATTTTAGATAATAGTCGTTGCCAGTATTAATCTATACACCTTGTTTATGTGAACGTGATTTGCAGACCCAAGGGAATCTGAATCTTTGAGGCCATTGGACATGCACCATGGAATGGAAGTCCGCCTTGGCCTGTCCAAGGGACCAGTTTGCCCAAGTTTCATATAATCTCATCTCAATTTCATTGTTGGCCTCAGTCTGCCCGTAATTTTGTTGACCTCTGTTTGTTTGTTGGTCAGCACCATCTTTGCTTCCTGTGAGCCAAACTATGAGTTTCATAGCCAATATCATCTGTTTGTTATCCCAACTTTTTATCTGATTTCTTATAAATAGATACCTTTGGCTTCAGTTCTTGATAGTGTTGTGATTTTGGGGATTTGTGATTGTGATTATTTGGATTTTTATGATTTTTTACAATTGCATGAGATCGGTGAAATTTGTTTAAATTCGTAACAGGAGAATGATACCAAGTGATTACGAAATAGTTAAAAGATCACTTCGATCACTCCAAAATATGTTTTTAATCATTAAAAATTAATTTAACGTTGATTCTCAATGATTAAAAACATGTTTCGGAGTTATTTTGTTTTGCGTCATTTTAAAGATTCATCTTCAATGCGATCAATGAATCATTGGACTCAATTACAAATAAAGGCAAGTTTCATTTTGATGAGAAGTCCATACACAGTGCAAGTACTTGTTCCATTTCAACTATGAACCACGTTTTCATCCTACTCTGCTGGCCCTCTGTAAACGTCACCTTTGTCGTTCGACCAAGCGATAACCGCAAGAATTACGAGGCCACCCAATACAACAACGAAGATACCCAATGAATTTATCAGCAAAGCCTCATTAGAATAGCGTAATATTACCTTACTGGTTTGAAGGAAGGTAGCTTTTTCCAACAATCCAGTAACAGTTGTAGCAATGCAAAGGCCATATATGTAAACGCCAAAGAAAACATGCCATGGCAACAGAGTAGCTCTGCTGTTTCTGGAGCCACCGGGGTACCAAAAGGTCACAAATCCTGCACCCCACTGTCCAAATGGAGCCACCCTAATTAATTAGAATCACGTAGCTCAACAAAAAGATAAAACATAGCAGCGGATATTACGGTTTACGAACCTGGATGCCAAACAAAAAGACAGAAACTAAGCCCAACCATGAATGTAGACTGTAAAAGTTTTCGATTCCCTTGTCATTGTGGAACTTCAAGGCAGCCCATATGCCAATCAGGCTTAAAAACAATGCAACAAACTGGAGTGCAAGATGAACTAGTTTCCTGAAGTTCTTGGTTCCTGAAACTGTCTTGTATGCTAACATGGCT

mRNA sequence

AAGAATTCAAAATAAATTATGATTATTTTGTCAATATTCAAAATTTTCTTCCAAGTCACGGTGTTTTGTATAAATACCAATACTTTACCAATTTTCTGTAGGCAGAGGCACGGCGAGCTCGCGACTTGCAGAACAAGTTTTAAGAAGTTTTCTTGAGCGAAGGGAAAACGAAAATGGAGTCTTCGAAGGCCATTCCCCATGAAATCGGAGGGATCCAGAATGATGCCCTTCGATTTGGGCTCCAAGGCGTGAAGAGCGATCTCGTTGGATCTCATCCTGTTGAATCCATCTATGAAACTACGAGAAGAACAGAAGAAGAGATGAAAAGGAAAATTCTGGTGAATACATATGGATCTGCTTTTCCATTGAAGATGGATTTTGAGAGGCAAATTCTTTCTCGATTTCAAAGGCCTCCAGGACCTATTCCATCTTCAATGTTGGGTTTGGAGGCTCTTACTGGAAGCTTGGATGACTTTGGCTTTGAAGATTATCTAAATGACCCAAGGGAATCTGAATCTTTGAGGCCATTGGACATGCACCATGGAATGGAAGTCCGCCTTGGCCTGTCCAAGGGACCAGTTTGCCCAAGTTTCATATAATCTCATCTCAATTTCATTGTTGGCCTCAGTCTGCCCGTAATTTTGTTGACCTCTGTTTGTTTGTTGGTCAGCACCATCTTTGCTTCCTGTGAGCCAAACTATGAGTTTCATAGCCAATATCATCTGTTTGTTATCCCAACTTTTTATCTGATTTCTTATAAATAGATACCTTTGGCTTCAGTTCTTGATAGTGTTGTGATTTTGGGGATTTGTGATTGTGATTATTTGGATTTTTATGATTTTTTACAATTGCATGAGATCGGTGAAATTTGTTTAAATTCGTAACAGGAGAATGATACCAAGTGATTACGAAATAGTTAAAAGATCACTTCGATCACTCCAAAATATGTTTTTAATCATTAAAAATTAATTTAACGTTGATTCTCAATGATTAAAAACATGTTTCGGAGTTATTTTGTTTTGCGTCATTTTAAAGATTCATCTTCAATGCGATCAATGAATCATTGGACTCAATTACAAATAAAGGCAAGTTTCATTTTGATGAGAAGTCCATACACAGTGCAAGTACTTGTTCCATTTCAACTATGAACCACGTTTTCATCCTACTCTGCTGGCCCTCTGTAAACGTCACCTTTGTCGTTCGACCAAGCGATAACCGCAAGAATTACGAGGCCACCCAATACAACAACGAAGATACCCAATGAATTTATCAGCAAAGCCTCATTAGAATAGCGTAATATTACCTTACTGGTTTGAAGGAAGGTAGCTTTTTCCAACAATCCAGTAACAGTTGTAGCAATGCAAAGGCCATATATGTAAACGCCAAAGAAAACATGCCATGGCAACAGAGTAGCTCTGCTGTTTCTGGAGCCACCGGGGTACCAAAAGGTCACAAATCCTGCACCCCACTGTCCAAATGGAGCCACCCTAATTAATTAGAATCACGTAGCTCAACAAAAAGATAAAACATAGCAGCGGATATTACGGTTTACGAACCTGGATGCCAAACAAAAAGACAGAAACTAAGCCCAACCATGAATGTAGACTGTAAAAGTTTTCGATTCCCTTGTCATTGTGGAACTTCAAGGCAGCCCATATGCCAATCAGGCTTAAAAACAATGCAACAAACTGGAGTGCAAGATGAACTAGTTTCCTGAAGTTCTTGGTTCCTGAAACTGTCTTGTATGCTAACATGGCT

Coding sequence (CDS)

ATGGAGTCTTCGAAGGCCATTCCCCATGAAATCGGAGGGATCCAGAATGATGCCCTTCGATTTGGGCTCCAAGGCGTGAAGAGCGATCTCGTTGGATCTCATCCTGTTGAATCCATCTATGAAACTACGAGAAGAACAGAAGAAGAGATGAAAAGGAAAATTCTGGTGAATACATATGGATCTGCTTTTCCATTGAAGATGGATTTTGAGAGGCAAATTCTTTCTCGATTTCAAAGGCCTCCAGGACCTATTCCATCTTCAATGTTGGGTTTGGAGGCTCTTACTGGAAGCTTGGATGACTTTGGCTTTGAAGATTATCTAAATGACCCAAGGGAATCTGAATCTTTGAGGCCATTGGACATGCACCATGGAATGGAAGTCCGCCTTGGCCTGTCCAAGGGACCAGTTTGCCCAAGTTTCATATAA

Protein sequence

MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYGSAFPLKMDFERQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFI

Homology

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BLAST of Cp4.1LG13g07830 vs. ExPASy Swiss-Prot
Match: Q0DWQ7 (Cyclin-B1-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCB1-2 PE=3 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 3.4e-23
Identity = 59/115 (51.30%), Postives = 73/115 (63.48%), Query Frame = 0


Query: 1   MESSKAIPHEIGGIQNDALRFGL-QGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTY 60
           M S   +  EIGG  +D +RFG+   VK DL   HP+++      +   + KR      Y
Sbjct: 1   MASGGVVKKEIGG-NHDVVRFGVNDSVKGDLAPPHPLQASVHKEAKFWADKKRFGAEAIY 60

Query: 61  GSAFPLKMDFERQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESE 115
           GSAF ++ D + QILS+FQRPPG +PSSMLG EALTGSLDDFGFEDYLN    SE
Sbjct: 61  GSAFNIRKDLDAQILSKFQRPPGALPSSMLGYEALTGSLDDFGFEDYLNYAAASE 114

[Close]

BLAST of Cp4.1LG13g07830 vs. ExPASy Swiss-Prot
Match: Q55G18 (Proteasome maturation protein homolog OS=Dictyostelium discoideum OX=44689 GN=pomp PE=3 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 8.4e-14
Identity = 46/111 (41.44%), Postives = 68/111 (61.26%), Query Frame = 0


Query: 23  LQGVKSDLVG-SHPVESIYETTRRTEEEMKRKILVNTYGSAFPLKMDFERQILSRFQRPP 82
           L+   S++ G SHPVESI     +TE ++K   + N +G+   +  + E+QI S+F+R P
Sbjct: 14  LRNESSNVKGLSHPVESIQLDQGKTEIKLKNFAMKNVFGTHMVMNNEIEKQIYSQFKRLP 73

Query: 83  GPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLDMHHGMEVRLGLS 133
             + SSM+GLE + G  +DF F DYL DP  SE+  P  +H  ME RLG++
Sbjct: 74  -TLQSSMVGLETILGLDEDFDFGDYLCDPATSEAPLP-QLHTSMEHRLGMT 122

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BLAST of Cp4.1LG13g07830 vs. ExPASy Swiss-Prot
Match: Q3SZV5 (Proteasome maturation protein OS=Bos taurus OX=9913 GN=POMP PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.1e-12
Identity = 44/116 (37.93%), Postives = 67/116 (57.76%), Query Frame = 0


Query: 16  NDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYGSAFPLKMDFERQILS 75
           +D LR G   VK++L+ SHP+E   +  +  +++M    L N  G   PLK+  E + + 
Sbjct: 28  HDLLRKGFSCVKNELLPSHPLELSEKNFQLNQDKMNFSTLRNIQGLFAPLKLQMEFKAVQ 87

Query: 76  RFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLDMHHGMEVRLGL 132
           + QR P  +PSS L L+ L G+ +  GFED LNDP +SE +   + H  +E +LGL
Sbjct: 88  QVQRLPF-LPSSNLSLDILRGNDETIGFEDILNDPSQSELMG--EPHLMVEYKLGL 140

[Close]

BLAST of Cp4.1LG13g07830 vs. ExPASy Swiss-Prot
Match: Q9Y244 (Proteasome maturation protein OS=Homo sapiens OX=9606 GN=POMP PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.3e-11
Identity = 43/116 (37.07%), Postives = 66/116 (56.90%), Query Frame = 0


Query: 16  NDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYGSAFPLKMDFERQILS 75
           +D LR G   VK++L+ SHP+E   +  +  +++M    L N  G   PLK+  E + + 
Sbjct: 28  HDLLRKGFSCVKNELLPSHPLELSEKNFQLNQDKMNFSTLRNIQGLFAPLKLQMEFKAVQ 87

Query: 76  RFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLDMHHGMEVRLGL 132
           + QR P  + SS L L+ L G+ +  GFED LNDP +SE +   + H  +E +LGL
Sbjct: 88  QVQRLPF-LSSSNLSLDVLRGNDETIGFEDILNDPSQSEVMG--EPHLMVEYKLGL 140

[Close]

BLAST of Cp4.1LG13g07830 vs. ExPASy Swiss-Prot
Match: Q9CQT5 (Proteasome maturation protein OS=Mus musculus OX=10090 GN=Pomp PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.3e-11
Identity = 43/116 (37.07%), Postives = 66/116 (56.90%), Query Frame = 0


Query: 16  NDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYGSAFPLKMDFERQILS 75
           +D LR G   VK++L+ SHP+E   +  +  +++M    L N  G   PLK+  E + + 
Sbjct: 28  HDLLRKGFSCVKNELLPSHPLELSEKNFQLNQDKMNFSTLRNIQGLFAPLKLQMEFKAVQ 87

Query: 76  RFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLDMHHGMEVRLGL 132
           +  R P  +PSS L L+ L G+ +  GFED LNDP +SE +   + H  +E +LGL
Sbjct: 88  QVHRLPF-LPSSNLSLDILRGNDETIGFEDILNDPSQSELMG--EPHVMVEHKLGL 140

[Close]

BLAST of Cp4.1LG13g07830 vs. NCBI nr
Match: XP_022939098.1 (cyclin-B1-2-like [Cucurbita moschata] >XP_023550448.1 cyclin-B1-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 288 bits (736), Expect = 4.98e-98
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYG 60
           MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYG
Sbjct: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYG 60

Query: 61  SAFPLKMDFERQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDFERQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDFERQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFI 141
           MHHGMEVRLGLSKGPVCPSFI
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFI 141

[Close]

BLAST of Cp4.1LG13g07830 vs. NCBI nr
Match: KAG6578507.1 (Cyclin-B1-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016072.1 Cyclin-B1-2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 284 bits (726), Expect = 1.67e-96
Identity = 140/141 (99.29%), Postives = 140/141 (99.29%), Query Frame = 0


Query: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYG 60
           MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYG
Sbjct: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYG 60

Query: 61  SAFPLKMDFERQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDFERQILSRFQRP GPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDFERQILSRFQRPLGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFI 141
           MHHGMEVRLGLSKGPVCPSFI
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFI 141

[Close]

BLAST of Cp4.1LG13g07830 vs. NCBI nr
Match: XP_022993234.1 (cyclin-B1-2-like [Cucurbita maxima])

HSP 1 Score: 283 bits (724), Expect = 3.37e-96
Identity = 139/141 (98.58%), Postives = 140/141 (99.29%), Query Frame = 0


Query: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYG 60
           MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYG
Sbjct: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYG 60

Query: 61  SAFPLKMDFERQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDFERQILSRFQRPPGPI SSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDFERQILSRFQRPPGPISSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFI 141
           MHHG+EVRLGLSKGPVCPSFI
Sbjct: 121 MHHGIEVRLGLSKGPVCPSFI 141

[Close]

BLAST of Cp4.1LG13g07830 vs. NCBI nr
Match: XP_038889455.1 (cyclin-B1-2-like [Benincasa hispida])

HSP 1 Score: 282 bits (722), Expect = 6.80e-96
Identity = 137/141 (97.16%), Postives = 140/141 (99.29%), Query Frame = 0


Query: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYG 60
           MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVES+YETTRRTEEEMKRKILVNTYG
Sbjct: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTEEEMKRKILVNTYG 60

Query: 61  SAFPLKMDFERQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMD +RQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFI 141
           MHHGMEVRLGLSKGPVCPSF+
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFM 141

[Close]

BLAST of Cp4.1LG13g07830 vs. NCBI nr
Match: XP_004141496.1 (cyclin-B1-2 [Cucumis sativus] >KGN52569.1 hypothetical protein Csa_009184 [Cucumis sativus])

HSP 1 Score: 281 bits (718), Expect = 2.77e-95
Identity = 135/141 (95.74%), Postives = 140/141 (99.29%), Query Frame = 0


Query: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYG 60
           MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVES+YETTRRT+EEMKRK+LVNTYG
Sbjct: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTQEEMKRKVLVNTYG 60

Query: 61  SAFPLKMDFERQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMD +RQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFI 141
           MHHGMEVRLGLSKGPVCPSF+
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFM 141

[Close]

BLAST of Cp4.1LG13g07830 vs. ExPASy TrEMBL
Match: A0A6J1FKQ4 (cyclin-B1-2-like OS=Cucurbita moschata OX=3662 GN=LOC111445100 PE=4 SV=1)

HSP 1 Score: 288 bits (736), Expect = 2.41e-98
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYG 60
           MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYG
Sbjct: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYG 60

Query: 61  SAFPLKMDFERQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDFERQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDFERQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFI 141
           MHHGMEVRLGLSKGPVCPSFI
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFI 141

[Close]

BLAST of Cp4.1LG13g07830 vs. ExPASy TrEMBL
Match: A0A6J1JZM6 (cyclin-B1-2-like OS=Cucurbita maxima OX=3661 GN=LOC111489315 PE=4 SV=1)

HSP 1 Score: 283 bits (724), Expect = 1.63e-96
Identity = 139/141 (98.58%), Postives = 140/141 (99.29%), Query Frame = 0


Query: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYG 60
           MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYG
Sbjct: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYG 60

Query: 61  SAFPLKMDFERQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDFERQILSRFQRPPGPI SSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDFERQILSRFQRPPGPISSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFI 141
           MHHG+EVRLGLSKGPVCPSFI
Sbjct: 121 MHHGIEVRLGLSKGPVCPSFI 141

[Close]

BLAST of Cp4.1LG13g07830 vs. ExPASy TrEMBL
Match: A0A0A0KUK6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G643970 PE=4 SV=1)

HSP 1 Score: 281 bits (718), Expect = 1.34e-95
Identity = 135/141 (95.74%), Postives = 140/141 (99.29%), Query Frame = 0


Query: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYG 60
           MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVES+YETTRRT+EEMKRK+LVNTYG
Sbjct: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTQEEMKRKVLVNTYG 60

Query: 61  SAFPLKMDFERQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMD +RQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFI 141
           MHHGMEVRLGLSKGPVCPSF+
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFM 141

[Close]

BLAST of Cp4.1LG13g07830 vs. ExPASy TrEMBL
Match: A0A1S3CAQ6 (cyclin-B1-2 OS=Cucumis melo OX=3656 GN=LOC103498587 PE=4 SV=1)

HSP 1 Score: 280 bits (716), Expect = 2.71e-95
Identity = 135/141 (95.74%), Postives = 140/141 (99.29%), Query Frame = 0


Query: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYG 60
           M+SSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVES+YETTRRT+EEMKRKILVNTYG
Sbjct: 1   MDSSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTQEEMKRKILVNTYG 60

Query: 61  SAFPLKMDFERQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMD +RQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFI 141
           MHHGMEVRLGLSKGPVCPSF+
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFM 141

[Close]

BLAST of Cp4.1LG13g07830 vs. ExPASy TrEMBL
Match: A0A5D3BR37 (Cyclin-B1-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001840 PE=4 SV=1)

HSP 1 Score: 280 bits (716), Expect = 3.44e-95
Identity = 135/141 (95.74%), Postives = 140/141 (99.29%), Query Frame = 0


Query: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYG 60
           M+SSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVES+YETTRRT+EEMKRKILVNTYG
Sbjct: 1   MDSSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTQEEMKRKILVNTYG 60

Query: 61  SAFPLKMDFERQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMD +RQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFI 141
           MHHGMEVRLGLSKGPVCPSF+
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFM 141

[Close]

BLAST of Cp4.1LG13g07830 vs. TAIR 10
Match: AT5G38650.1 (Proteasome maturation factor UMP1 )

HSP 1 Score: 230.3 bits (586), Expect = 9.4e-61
Identity = 103/141 (73.05%), Postives = 126/141 (89.36%), Query Frame = 0


Query: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYG 60
           MES K I HEIGG++NDALRFGL GVKSD++ SHP+E+ YE+ ++++EEMKR+++ +TYG
Sbjct: 1   MESQKKIAHEIGGMKNDALRFGLHGVKSDILRSHPLETAYESGKQSQEEMKRRVITHTYG 60

Query: 61  SAFPLKMDFERQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           +A PLKMD +RQILSRFQRPPGPIPSSMLGLE  TG+LD+FGFEDYLNDPRESE+L+P+D
Sbjct: 61  AALPLKMDLDRQILSRFQRPPGPIPSSMLGLEVYTGALDNFGFEDYLNDPRESETLKPVD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFI 142
            HHGMEVRLGLSKGP  PSF+
Sbjct: 121 FHHGMEVRLGLSKGPASPSFM 141

[Close]

BLAST of Cp4.1LG13g07830 vs. TAIR 10
Match: AT5G38660.2 (acclimation of photosynthesis to environment )

HSP 1 Score: 230.3 bits (586), Expect = 9.4e-61
Identity = 103/141 (73.05%), Postives = 126/141 (89.36%), Query Frame = 0


Query: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYG 60
           MES K I HEIGG++NDALRFGL GVKSD++ SHP+E+ YE+ ++++EEMKR+++ +TYG
Sbjct: 291 MESQKKIAHEIGGMKNDALRFGLHGVKSDILRSHPLETAYESGKQSQEEMKRRVITHTYG 350

Query: 61  SAFPLKMDFERQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           +A PLKMD +RQILSRFQRPPGPIPSSMLGLE  TG+LD+FGFEDYLNDPRESE+L+P+D
Sbjct: 351 AALPLKMDLDRQILSRFQRPPGPIPSSMLGLEVYTGALDNFGFEDYLNDPRESETLKPVD 410

Query: 121 MHHGMEVRLGLSKGPVCPSFI 142
            HHGMEVRLGLSKGP  PSF+
Sbjct: 411 FHHGMEVRLGLSKGPASPSFM 431

[Close]

BLAST of Cp4.1LG13g07830 vs. TAIR 10
Match: AT1G67250.1 (Proteasome maturation factor UMP1 )

HSP 1 Score: 225.7 bits (574), Expect = 2.3e-59
Identity = 98/141 (69.50%), Postives = 124/141 (87.94%), Query Frame = 0


Query: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESIYETTRRTEEEMKRKILVNTYG 60
           MES K I HEIGG++NDALRFGL GVKS+++GSHP+ES YE+ ++++E +KR ++ + YG
Sbjct: 1   MESEKKIAHEIGGVKNDALRFGLHGVKSNIIGSHPLESSYESEKKSKEALKRTVIAHAYG 60

Query: 61  SAFPLKMDFERQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           +A PLKMD +RQILSRFQRPPGPIPSSMLGLE  TG++DDFGFEDYLNDPR+SE+ +P+D
Sbjct: 61  TALPLKMDMDRQILSRFQRPPGPIPSSMLGLEVYTGAVDDFGFEDYLNDPRDSETFKPVD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFI 142
            HHGMEVRLG+SKGP+ PSF+
Sbjct: 121 FHHGMEVRLGISKGPIYPSFM 141

[Close]

BLAST of Cp4.1LG13g07830 vs. TAIR 10
Match: AT1G62920.1 (CONTAINS InterPro DOMAIN/s: Proteasome maturation factor UMP1 (InterPro:IPR008012); BEST Arabidopsis thaliana protein match is: Proteasome maturation factor UMP1 (TAIR:AT1G67250.1); Has 70 Blast hits to 70 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 57.8 bits (138), Expect = 8.3e-09
Identity = 32/71 (45.07%), Postives = 36/71 (50.70%), Query Frame = 0


Query: 62  AFPLKMDFERQILSRF------------------------QRPPGPIPSSMLGLEALTGS 109
           A PLKMD +R IL R+                         RP GPIPS ML LE  TG+
Sbjct: 4   ALPLKMDLDRPILPRYGMLDQYHYEIIPLNSDAYSAIRYENRPTGPIPSLMLDLEVYTGA 63

The following BLAST results are available for this feature:

BLAST of Cp4.1LG13g07830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0DWQ7	3.4e-23	51.30	Cyclin-B1-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCB1-2 PE=3 SV=1	[more]
Q55G18	8.4e-14	41.44	Proteasome maturation protein homolog OS=Dictyostelium discoideum OX=44689 GN=po...	[more]
Q3SZV5	2.1e-12	37.93	Proteasome maturation protein OS=Bos taurus OX=9913 GN=POMP PE=2 SV=1	[more]
Q9Y244	1.3e-11	37.07	Proteasome maturation protein OS=Homo sapiens OX=9606 GN=POMP PE=1 SV=1	[more]
Q9CQT5	1.3e-11	37.07	Proteasome maturation protein OS=Mus musculus OX=10090 GN=Pomp PE=1 SV=1	[more]

BLAST of Cp4.1LG13g07830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022939098.1	4.98e-98	100.00	cyclin-B1-2-like [Cucurbita moschata] >XP_023550448.1 cyclin-B1-2-like [Cucurbit...	[more]
KAG6578507.1	1.67e-96	99.29	Cyclin-B1-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016072.1 Cycli...	[more]
XP_022993234.1	3.37e-96	98.58	cyclin-B1-2-like [Cucurbita maxima]	[more]
XP_038889455.1	6.80e-96	97.16	cyclin-B1-2-like [Benincasa hispida]	[more]
XP_004141496.1	2.77e-95	95.74	cyclin-B1-2 [Cucumis sativus] >KGN52569.1 hypothetical protein Csa_009184 [Cucum...	[more]

BLAST of Cp4.1LG13g07830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FKQ4	2.41e-98	100.00	cyclin-B1-2-like OS=Cucurbita moschata OX=3662 GN=LOC111445100 PE=4 SV=1	[more]
A0A6J1JZM6	1.63e-96	98.58	cyclin-B1-2-like OS=Cucurbita maxima OX=3661 GN=LOC111489315 PE=4 SV=1	[more]
A0A0A0KUK6	1.34e-95	95.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G643970 PE=4 SV=1	[more]
A0A1S3CAQ6	2.71e-95	95.74	cyclin-B1-2 OS=Cucumis melo OX=3656 GN=LOC103498587 PE=4 SV=1	[more]
A0A5D3BR37	3.44e-95	95.74	Cyclin-B1-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001840 P...	[more]

BLAST of Cp4.1LG13g07830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38650.1	9.4e-61	73.05	Proteasome maturation factor UMP1	[more]
AT5G38660.2	9.4e-61	73.05	acclimation of photosynthesis to environment	[more]
AT1G67250.1	2.3e-59	69.50	Proteasome maturation factor UMP1	[more]
AT1G62920.1	8.3e-09	45.07	CONTAINS InterPro DOMAIN/s: Proteasome maturation factor UMP1 (InterPro:IPR00801...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008012	Proteasome maturation factor Ump1	PFAM	PF05348	UMP1	coord: 15..129 e-value: 1.5E-34 score: 118.6
IPR008012	Proteasome maturation factor Ump1	PANTHER	PTHR12828	PROTEASOME MATURATION PROTEIN UMP1	coord: 1..141
None	No IPR available	PANTHER	PTHR12828:SF8	BNAA07G25120D PROTEIN	coord: 1..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG13g07830.1	Cp4.1LG13g07830.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043248	proteasome assembly
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
cellular_component	GO:0000502	proteasome complex