Cp4.1LG13g05810 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTATGGTCCTTTTCTCTTAAAAAACTCTCTTTCACTGATATCCGTTCTTTTAATAATCTTGGTGGACGGCCATGGCTGACTCAGCTCAAAGCTTCATGTTTCAATGTCTCACCATTTATAAGAGTTGCAGGAAGAACATTGATCATCCACCCCCACTCCTTTACCGTGTACATTAATTCATACATACAACTAGAAGCAGAAGAAAATGGATGCTTTGATGACCCGAGAAGTCGCCGGGATCCTTGTTGGCTCCACGGCGTTTCAGCCGGTTGAGAAGTCGCTGAAGAGACTGTTGCCTGCTCCGATCGGTAGTCAATCTCCCGATGGCGAACCCCGGGCGACAAAACAATGTAAAGCTTCTATTTCTTTTTCTTTCCTTGGGTTGATGTCTATGTGTATTTGTTGTGAGGGTGAATGGTGACTGAATGGAGAGAGTTTTGTAAATGTTTGCAGGTAGAGAGGATGCAGTTGTTAGCAGGGGGAGCAAGGTTGGGAGTTTTGCCCATGGAGTTAGAGAACATGGTAAGCTCTTTTTTTCTTCACTATATGGTTCTTTAATATCAAATCAAATCCATGAGGCTTATAATTAAGACTTTCAACATCCCATTAAACCAACTCAAAGATGATTGTTCTTCAATCAAATTATTATAGTTGCTAGCAGATATTGTTCTCTTTTTTGGACTTTCCCTTTCGGGTTTCCTCACGATTTTGAAATGCGTCCGTTAGGGAGAGGTTTCCACACCCTTATAAAGAATGTTTCTGTTCCCCTTTCCAGCCGATGTGGGATCTCACAATCCACCCCCTTTATGGGCCCAGCGTCCTCGCTGGCACTCGTTCCCCTCTCCAATTGATGTGAGATCTCACAATGAACCCCCTTCGAGGCTCAGCATCCTCGTTGGCACACCGTCCGGTGTCTGGCTCTAATACCATTTGTAACAGCTCAAGCCCAACGCTAGCCAGATATTGTCCTCTTTGGGTTTTCCCTTTTGGGTTTCTCCTCATGGTTTTAAAACGCGTTTGCTAAGGAGAGGTTTCCACACGCTTATAAAAAAATGTTTCGTTTCCTTCTCTAACCGATGTGGGATCTCACAATAGTACAACATTAGAAGCCATGAACTTATGAGTGTATTGTTTGGTTTGTCAAGTTGCAGTGAGATTAGGACAAAAGATCAGAGAAACAGTGAAGGGAAAGTTGAACTTGGGAGCAAAGATTCTTCAAGTTGGTGGGTTGAGGAAAGTTTACAAGCAGTTATTTAGTGTAAGAGAAGGAGAGAAGCTATTGAAGGCTTGTCAATGCCATTTGTCAACAACAACAGGACCCCTTGCAGGTCTTCTCTTCATATCCACACACAAACTAGCCTTTTGCAGTGACAAATCACTCAAACTTTCTTCCCCAACTGGAGAGCTCCTAAGATTCCATTACAAGGTAACAACCTATCTCTCTCTTCGATCCACTATTTGTTTACGAGAGAAACACATTCTTATTAGGTCTCCCCTCATCTGGCTCTATGCAGGCTTAACCGCCGCTCCGAGTTTACAAGGAGACACTGTAAGATGAGTAGTTTGTCTCGGGATTAGTTCCTTGAAGGACCAACTAATTATTAGTAAAGTCATGTTCGAAAAGGGAACAAACCCGTCTTAGGTCAAAAAAATTTATGGTTAAAATTTTCTTTCGAACGTAAAGTTGTCTCGAGTTAGATGTTTACTAAACTGGTTGTGATGTTGGTGCAGGTAGTGATTCCAATGGGGAGGATAGAGAGAGTGAACCAAAGTAAGAATGTGATGAAGCCTTCACAGAAATACTTGGAGATAGTAACGGTGGATAATTTTGATTTCTGGTTCATGGGGTTCCAAAATTTTCAAAAAACATTCAGATTTCTTCAACAAGCTATCTCTCATGAGTGGAAGACTAACTGCTAGTTATGTTTGGAACTTGGAAGAATATGTTTAGCAGAAGTGTTTTCTTTTCTATTCTATTCCTTTCGGTTTCCTTGTGCTTCCTAGGATTTACTTAATGGAGCCAAGGAAAGCTAGATAGATACATTTGTCTCAATTTGTACAAATTTCAATTAGTATCAATGTAAGTTGATATATATTATGTGTATGTTTGGTGTTAGCTTCTCCAAATTTATAGTCACTCAAATTTTTAGAATCATGGGGTGACTTTGTTTATGTTATACGCATGCACCCTCTCGTGCTCGTTCAACAGCACAAGCCGAGCATGATCAACACCTCATAAATACAAAAGAACTATGATCTATATTATAAACCAATGAATTTTAGGCTTTTGTTTACCCTCACTGGTTTGTGAGAACAAACAATGTTGTATAAAAAGAAGATGAGGTAAAATGGTGAGCAACTAACTCATTGAGCTAACAGGACTCTCTACAACAAGAGGTAAGCAAGCAATCGGCCAGGAACTGACTAAGCTGAGAAGTATACAATTTTGGGTCATTCCTAAAATGATCTACATGAGGGGTGGACACAAAATTACAAGCTCTAACCTCATGTCCTGCGCGTCGTTGCTCCTCTATAAATGATTCCACGGAATCTGCTGGGATAACTCGATCTGCTGAGCTGTAGATATACAATTGAGGGCAGCTTGGTTGTGACAACGATAATGTGTTCAACACATCAGAGAGCCTCCTGGTAGGAAAATATAACAATTTTCATCTTTTAGATTTCGTGGACAGGTGTATGAACTAAAATTGCACATAAACTGTAGTTACAATTCTAAACATAATTGAACAAAGGCACAGTTGTAAATGGATATGAACTTAATCATATTTATGCACTGTCTCTTGTTAATGACCATCCTATATAATTTTAGAGTTCAATATTTTCCAAATTTTTCTTGCATCTGCTCAATCTTGTAATATATCGGTAGTAGTGGCAGCAAAAGGAAGGTGCCATTACAGGTAGGACCAACCCCTCTACACCCCCCATCTTCCACCGACTATCTACCACCAGCCGTCACCACCAGCTCAACACTCTCTCGACAACCAGAAAACCAACTACCGACCCCTAAAGAAGTGACCTGCCACTCAATTGAAGTCAATTCCATTTATAGAGGCACAAGATTGAAGATTACAAAGTCTATAAGAGATAAGCCTTCATTGTCACACTACCCTGGTAATCATTGCATTGGCTGGTTACTATCTTCTTTGTCTCAGCTTCTCTAAACCAGAAATTCTTCAAAGAAGAGAGGTTCCTTGAACATACCATTTTGGTTGAGAAAATTACCTACAAGAAAGGAACATTAGCTGGACTACTTCGGATGCTAATGGTTTGTCAAGGGTATCCTCGTGATGTGGAACGACCCTACTCTATCCATCTTTGATATCACCAAAGGCCGGTACACTTTTACCACCCTCTTCATTCATGCTGATGGGTTCAAGTTTTGGATTTCAGGGGTTTGTGACCTTTGAAGATTCTGGAAGAGACTTAGTTTTTGGCAAGAACTTTTTTATGTGTCCTTCCTCTACTCTTTGAGTATTGGTGGAAAGACATATGGTCTTATCATGAAACTCAAAGGGCTGAAGGAAATGATCGAACCGTGGAATAAAGACATTTTTTGGCTGCAAACTCACTCAAAGAAACCAGGTT TTATGGTCCTTTTCTCTTAAAAAACTCTCTTTCACTGATATCCGTTCTTTTAATAATCTTGGTGGACGGCCATGGCTGACTCAGCTCAAAGCTTCATGTTTCAATGTCTCACCATTTATAAGAGTTGCAGGAAGAACATTGATCATCCACCCCCACTCCTTTACCGTGTACATTAATTCATACATACAACTAGAAGCAGAAGAAAATGGATGCTTTGATGACCCGAGAAGTCGCCGGGATCCTTGTTGGCTCCACGGCGTTTCAGCCGGTTGAGAAGTCGCTGAAGAGACTGTTGCCTGCTCCGATCGGTAGTCAATCTCCCGATGGCGAACCCCGGGCGACAAAACAATGTAGAGAGGATGCAGTTGTTAGCAGGGGGAGCAAGGTTGGGAGTTTTGCCCATGGAGTTAGAGAACATGTTGCAGTGAGATTAGGACAAAAGATCAGAGAAACAGTGAAGGGAAAGTTGAACTTGGGAGCAAAGATTCTTCAAGTTGGTGGGTTGAGGAAAGTTTACAAGCAGTTATTTAGTGTAAGAGAAGGAGAGAAGCTATTGAAGGCTTGTCAATGCCATTTGTCAACAACAACAGGACCCCTTGCAGGTCTTCTCTTCATATCCACACACAAACTAGCCTTTTGCAGTGACAAATCACTCAAACTTTCTTCCCCAACTGGAGAGCTCCTAAGATTCCATTACAAGGTAGTGATTCCAATGGGGAGGATAGAGAGAGTGAACCAAAGTAAGAATGTGATGAAGCCTTCACAGAAATACTTGGAGATAGTAACGGTGGATAATTTTGATTTCTGGTTCATGGGGTTCCAAAATTTTCAAAAAACATTCAGATTTCTTCAACAAGCTATCTCTCATGAGTGGAAGACTAACTGCTAGTTATGTTTGGAACTTGGAAGAATATGTTTAGCAGAAGTGTTTTCTTTTCTATTCTATTCCTTTCGGTTTCCTTGTGCTTCCTAGGATTTACTTAATGGAGCCAAGGAAAGCTAGATAGATACATTTGTCTCAATTTGTACAAATTTCAATTAGTATCAATGTAAGTTGATATATATTATGTGTATGTTTGGTGTTAGCTTCTCCAAATTTATAGTCACTCAAATTTTTAGAATCATGGGGTGACTTTGTTTATGTTATACGCATGCACCCTCTCGTGCTCGTTCAACAGCACAAGCCGAGCATGATCAACACCTCATAAATACAAAAGAACTATGATCTATATTATAAACCAATGAATTTTAGGCTTTTGTTTACCCTCACTGGTTTGTGAGAACAAACAATGTTGTATAAAAAGAAGATGAGGTAAAATGGTGAGCAACTAACTCATTGAGCTAACAGGACTCTCTACAACAAGAGGTAAGCAAGCAATCGGCCAGGAACTGACTAAGCTGAGAAGTATACAATTTTGGGTCATTCCTAAAATGATCTACATGAGGGGTGGACACAAAATTACAAGCTCTAACCTCATGTCCTGCGCGTCGTTGCTCCTCTATAAATGATTCCACGGAATCTGCTGGGATAACTCGATCTGCTGAGCTGTAGATATACAATTGAGGGCAGCTTGGTTGTGACAACGATAATGTGTTCAACACATCAGAGAGCCTCCTGGTAGGAAAATATAACAATTTTCATCTTTTAGATTTCGTGGACAGGTGTATGAACTAAAATTGCACATAAACTGTAGTTACAATTCTAAACATAATTGAACAAAGGCACAGTTGTAAATGGATATGAACTTAATCATATTTATGCACTGTCTCTTGTTAATGACCATCCTATATAATTTTAGAGTTCAATATTTTCCAAATTTTTCTTGCATCTGCTCAATCTTGTAATATATCGGTAGTAGTGGCAGCAAAAGGAAGGTGCCATTACAGGTAGGACCAACCCCTCTACACCCCCCATCTTCCACCGACTATCTACCACCAGCCGTCACCACCAGCTCAACACTCTCTCGACAACCAGAAAACCAACTACCGACCCCTAAAGAAGTGACCTGCCACTCAATTGAAGTCAATTCCATTTATAGAGGCACAAGATTGAAGATTACAAAGTCTATAAGAGATAAGCCTTCATTGTCACACTACCCTGGTAATCATTGCATTGGCTGGTTACTATCTTCTTTGTCTCAGCTTCTCTAAACCAGAAATTCTTCAAAGAAGAGAGGTTCCTTGAACATACCATTTTGGTTGAGAAAATTACCTACAAGAAAGGAACATTAGCTGGACTACTTCGGATGCTAATGGTTTGTCAAGGGTATCCTCGTGATGTGGAACGACCCTACTCTATCCATCTTTGATATCACCAAAGGCCGGTACACTTTTACCACCCTCTTCATTCATGCTGATGGGTTCAAGTTTTGGATTTCAGGGGTTTGTGACCTTTGAAGATTCTGGAAGAGACTTAGTTTTTGGCAAGAACTTTTTTATGTGTCCTTCCTCTACTCTTTGAGTATTGGTGGAAAGACATATGGTCTTATCATGAAACTCAAAGGGCTGAAGGAAATGATCGAACCGTGGAATAAAGACATTTTTTGGCTGCAAACTCACTCAAAGAAACCAGGTT ATGGATGCTTTGATGACCCGAGAAGTCGCCGGGATCCTTGTTGGCTCCACGGCGTTTCAGCCGGTTGAGAAGTCGCTGAAGAGACTGTTGCCTGCTCCGATCGGTAGTCAATCTCCCGATGGCGAACCCCGGGCGACAAAACAATGTAGAGAGGATGCAGTTGTTAGCAGGGGGAGCAAGGTTGGGAGTTTTGCCCATGGAGTTAGAGAACATGTTGCAGTGAGATTAGGACAAAAGATCAGAGAAACAGTGAAGGGAAAGTTGAACTTGGGAGCAAAGATTCTTCAAGTTGGTGGGTTGAGGAAAGTTTACAAGCAGTTATTTAGTGTAAGAGAAGGAGAGAAGCTATTGAAGGCTTGTCAATGCCATTTGTCAACAACAACAGGACCCCTTGCAGGTCTTCTCTTCATATCCACACACAAACTAGCCTTTTGCAGTGACAAATCACTCAAACTTTCTTCCCCAACTGGAGAGCTCCTAAGATTCCATTACAAGGTAGTGATTCCAATGGGGAGGATAGAGAGAGTGAACCAAAGTAAGAATGTGATGAAGCCTTCACAGAAATACTTGGAGATAGTAACGGTGGATAATTTTGATTTCTGGTTCATGGGGTTCCAAAATTTTCAAAAAACATTCAGATTTCTTCAACAAGCTATCTCTCATGAGTGGAAGACTAACTGCTAG MDALMTREVAGILVGSTAFQPVEKSLKRLLPAPIGSQSPDGEPRATKQCREDAVVSRGSKVGSFAHGVREHVAVRLGQKIRETVKGKLNLGAKILQVGGLRKVYKQLFSVREGEKLLKACQCHLSTTTGPLAGLLFISTHKLAFCSDKSLKLSSPTGELLRFHYKVVIPMGRIERVNQSKNVMKPSQKYLEIVTVDNFDFWFMGFQNFQKTFRFLQQAISHEWKTNC Homology
BLAST of Cp4.1LG13g05810 vs. ExPASy Swiss-Prot
Match: Q9FTA0 (GEM-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=At5g08350 PE=2 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 1.3e-53 Identity = 104/186 (55.91%), Postives = 141/186 (75.81%), Query Frame = 0
BLAST of Cp4.1LG13g05810 vs. ExPASy Swiss-Prot
Match: Q9FMW4 (Putative GEM-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=At5g23370 PE=3 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 6.6e-53 Identity = 104/168 (61.90%), Postives = 132/168 (78.57%), Query Frame = 0
BLAST of Cp4.1LG13g05810 vs. ExPASy Swiss-Prot
Match: Q9FMW6 (GEM-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=At5g23350 PE=2 SV=2) HSP 1 Score: 206.5 bits (524), Expect = 3.3e-52 Identity = 101/166 (60.84%), Postives = 131/166 (78.92%), Query Frame = 0
BLAST of Cp4.1LG13g05810 vs. ExPASy Swiss-Prot
Match: Q9FMW5 (GEM-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=At5g23360 PE=2 SV=1) HSP 1 Score: 201.1 bits (510), Expect = 1.4e-50 Identity = 97/163 (59.51%), Postives = 129/163 (79.14%), Query Frame = 0
BLAST of Cp4.1LG13g05810 vs. ExPASy Swiss-Prot
Match: Q9LYV6 (GEM-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=At5g13200 PE=1 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 1.1e-28 Identity = 58/147 (39.46%), Postives = 92/147 (62.59%), Query Frame = 0
BLAST of Cp4.1LG13g05810 vs. NCBI nr
Match: XP_022938453.1 (GEM-like protein 4 isoform X1 [Cucurbita moschata] >XP_023551579.1 GEM-like protein 4 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 456 bits (1172), Expect = 1.13e-161 Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0
BLAST of Cp4.1LG13g05810 vs. NCBI nr
Match: XP_022993511.1 (GEM-like protein 4 isoform X1 [Cucurbita maxima]) HSP 1 Score: 452 bits (1163), Expect = 2.67e-160 Identity = 225/227 (99.12%), Postives = 226/227 (99.56%), Query Frame = 0
BLAST of Cp4.1LG13g05810 vs. NCBI nr
Match: XP_022938454.1 (putative GEM-like protein 8 isoform X2 [Cucurbita moschata] >XP_023551580.1 putative GEM-like protein 8 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 447 bits (1151), Expect = 1.68e-158 Identity = 225/227 (99.12%), Postives = 225/227 (99.12%), Query Frame = 0
BLAST of Cp4.1LG13g05810 vs. NCBI nr
Match: XP_022993512.1 (putative GEM-like protein 8 isoform X2 [Cucurbita maxima]) HSP 1 Score: 444 bits (1142), Expect = 3.96e-157 Identity = 223/227 (98.24%), Postives = 224/227 (98.68%), Query Frame = 0
BLAST of Cp4.1LG13g05810 vs. NCBI nr
Match: XP_038875315.1 (putative GEM-like protein 8 [Benincasa hispida]) HSP 1 Score: 414 bits (1065), Expect = 2.33e-145 Identity = 207/227 (91.19%), Postives = 215/227 (94.71%), Query Frame = 0
BLAST of Cp4.1LG13g05810 vs. ExPASy TrEMBL
Match: A0A6J1FIY0 (GEM-like protein 4 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444686 PE=3 SV=1) HSP 1 Score: 456 bits (1172), Expect = 5.49e-162 Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0
BLAST of Cp4.1LG13g05810 vs. ExPASy TrEMBL
Match: A0A6J1JWI9 (GEM-like protein 4 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489495 PE=3 SV=1) HSP 1 Score: 452 bits (1163), Expect = 1.29e-160 Identity = 225/227 (99.12%), Postives = 226/227 (99.56%), Query Frame = 0
BLAST of Cp4.1LG13g05810 vs. ExPASy TrEMBL
Match: A0A6J1FE51 (putative GEM-like protein 8 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444686 PE=3 SV=1) HSP 1 Score: 447 bits (1151), Expect = 8.13e-159 Identity = 225/227 (99.12%), Postives = 225/227 (99.12%), Query Frame = 0
BLAST of Cp4.1LG13g05810 vs. ExPASy TrEMBL
Match: A0A6J1JT11 (putative GEM-like protein 8 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489495 PE=3 SV=1) HSP 1 Score: 444 bits (1142), Expect = 1.92e-157 Identity = 223/227 (98.24%), Postives = 224/227 (98.68%), Query Frame = 0
BLAST of Cp4.1LG13g05810 vs. ExPASy TrEMBL
Match: A0A5D3CXS2 (GEM-like protein 4 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold790G00560 PE=3 SV=1) HSP 1 Score: 411 bits (1057), Expect = 1.87e-144 Identity = 207/227 (91.19%), Postives = 211/227 (92.95%), Query Frame = 0
BLAST of Cp4.1LG13g05810 vs. TAIR 10
Match: AT5G08350.1 (GRAM domain-containing protein / ABA-responsive protein-related ) HSP 1 Score: 211.1 bits (536), Expect = 9.5e-55 Identity = 104/186 (55.91%), Postives = 141/186 (75.81%), Query Frame = 0
BLAST of Cp4.1LG13g05810 vs. TAIR 10
Match: AT5G23370.1 (GRAM domain-containing protein / ABA-responsive protein-related ) HSP 1 Score: 208.8 bits (530), Expect = 4.7e-54 Identity = 104/168 (61.90%), Postives = 132/168 (78.57%), Query Frame = 0
BLAST of Cp4.1LG13g05810 vs. TAIR 10
Match: AT5G23350.1 (GRAM domain-containing protein / ABA-responsive protein-related ) HSP 1 Score: 206.5 bits (524), Expect = 2.3e-53 Identity = 101/166 (60.84%), Postives = 131/166 (78.92%), Query Frame = 0
BLAST of Cp4.1LG13g05810 vs. TAIR 10
Match: AT5G23360.1 (GRAM domain-containing protein / ABA-responsive protein-related ) HSP 1 Score: 201.1 bits (510), Expect = 9.8e-52 Identity = 97/163 (59.51%), Postives = 129/163 (79.14%), Query Frame = 0
BLAST of Cp4.1LG13g05810 vs. TAIR 10
Match: AT5G13200.1 (GRAM domain family protein ) HSP 1 Score: 128.3 bits (321), Expect = 8.1e-30 Identity = 58/147 (39.46%), Postives = 92/147 (62.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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