Cp4.1LG13g04440 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG13g04440
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Proteasome subunit beta
Location	Cp4.1LG13: 6054253 .. 6060078 (-)
RNA-Seq Expression	Cp4.1LG13g04440
Synteny	Cp4.1LG13g04440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATGGGTTTAGAAGAAAAAACCCGAAAAAATCCGATAATTTTAAGAATTAATTAGAAAATAAGAAAACAAGAAAGCTGGAGAAGCCAGAAGTTGGAGTGAAGCCCAAGCCATCAATAGCTATACTATAAACCAGTGCGTCGCTCGTTTCCCGCATTCTTCTCTGCGATTCAACTCCCTCTTCTCTCAGGTTTGGATTTAATCTTTTCTTCAAAAGTTCAGTTCATTTTGTATCTGTGATTGTTTACGATTAGGGTTTTGGATTGGGATTGTGTTTTCTTTGATTTTGATTTCGGTATGAACATTTCCGATCGTCCTGGCTGACAATTATTTTCCTTCCTTTTTTCATGTCACAGATTCTTATAATTTGATCGGGGAAAGCTTGAGTTTCGGACCTGATGTCGGTGCGTTTCTCTTCTTAGCATTTAGTTGGTTGGATTGCACCTTTTCATTTTTCTTTATTTATTCTTACCCTNTTAGTTCATGCATTTTAATAATGGAATATTATTGTAGATCTTTGAGTATAATGGAAGTGCTGTTGTTGCGATGGTGGGGAAGAATTGCTTTGCCATTGCTAGTGATCGTAGGCTTGGTGTTCAACTGCAGACTATTGCCACAGATTTCCAGAAAATTTACAGGATTCATGATAAGCTGTTTCTCGGCCTTTCGGGCCTGGGTACCGATGCTCAGACAATGTATGTTTTCCGTGGTAGAATCGTTTTTTTGGTTTAATTTACCATTTCTTAATTCCTTCTGCCCTTGGAATGAAGGTATCAACGGCTTGTCTATCAGCACAAACTGTACCAACTTCGAGAAGAGAGGGACATGAAGCCGGAGACATTTGCTAGCCTTGTCTCAGCTCGTCTTTATGAGAAAAGGTTGGACACCTACTTAATTTTTATTTTCCCTCTTTTTCAGCGGTTTTAATCATGCATATTCTCTATTTTTCGGCCTTGACACGAAAACATGGTCGAGATTTCTTTTGGATTTTTATAGCTTCTTTTGTGTGTTTTTTCCGTCTACCAATGTGATTATTTTCTGTTGGTGGAAGATTGTGAGCTGATTTGATAGAGATGTTGCGTTGCACTAGGAAACACTTGAGAGTTTATGACATGTGAACCTTTGATGCAGCACAGCACAGATATGCAGTCAAACCTGTTATGGAATTGATATATGTTAAACTGACATGCAAGATATTTTATACTTTATTTAAAATACGGTTACAAGTTGAATTGCTGTATAGTTGAAATGTGGATAAACTAAAGAACTGTATTGGATTAAGTGTCTCCGTCTCAAGATAGTTCCTAGTCTCTCTCCTAACTTTTGGAGGAAACGTAAACTGTTTTGGGATAATCAAAACGAAAGTGAAATGGTAGAGTTAACCTTTCCTCTCATTAGTTTGTAAGTAATCTTTTATTGCATGACATGAATATACCGAAAGCTTAAGCACTATTTCCAAGATTCAAATGCTTGAAATTTGATCTTCTCAATTTTAATGAGTGGACCTTGGTACCGACACTAAACTGTTGTCTCAATTACGCTCTTTGTAGAACTGACCATGATGAAGTCATGTTATAATTGGATTGGAAAGTAGTATTGCCCTGATTTTCATTTTTTTGTTCTATAGTCTTAGTTGGTAATCCATGGATAGAGATGTACAAGGGTCGAGTTTATAATTTTTTTTGTAAGAGGTTGAGTTTTATGGCTGTTATTTGGCCTTTTTTTAGCTCGGATTAAAATCTCATGTATCAATTTTCTTATTTTTAGGTTTGGTCCATACTTCTGTCAACCTGTAATTGCTGGATTGAGTGATGAAGACAAACCCTTCATTTGCACGATGGATTCCATTGGGGCTAAGTGAGTTCTCTCTCTCTTTTTTTTTTTTCTTTCTTTGTCTAATTCCCAACTTCTTTATTTTATTGGATTTGAATTTCTGCTTAAATCATTTATATGGCTTTCTTCATTTTTGTTTGAAATGTGCATCAAACTTGAAGTTGCATCCTCTGCAACACGTTGTAATGAAATCTGATTTTTGGGACAAATATTTTTCTAGATTTAGGACAATTAATGCAAAACTAATACGTTGTCAAATTCATTGTCCCAGAGAGCTTGCTAAGGATTTTGTTGTTTCTGGCACTGCATCAGAGTCCCTTTATGGTGCTTGTGAGGCGATGTTTAAACCTGACATGGTATGTTGGTCTAATCCATTTGCCTATGCTTTGTATTTGTCACTGGGATTCTAAGTTTCTTTGCATTGAGAAAGAAATTGATTTTAGTTGCCTGTTCGCTTAATCTTTTCGATTTAACAATCTACCATCTCCATAGGAGTGTTAGTGTTTTGGGTCAGGTCAATTTGTTGACCAGATGGATACTGACAGTTGAATGTAAGATATCTAAAATAACTTGTTAGTCAGTTCAGTTCAGTGTTGGAATCATAGAAGAAGGATTAAGTGTATACCCATAAAAGGAAGAGGTAGAGAAATTAGTGCATGTCTGTGGTAGAGGGAAAGAGAATAGAAAAGTAAAGTATAAAAGAAATGATAATTCAATTAGAAACGTTCACCAATCACTATCTTTGATACTTGAAGGACAAATTAGGTATGTTAAAACTGTGTCTTCCTGTTGGAATTGGAAAATCAGACATAATCATTGAACAAAGGGATTGATAAATCCCATGGATTGAATTTTTACAAAAGAGGACGAAACATGAAGATAATTGTTTGGTTATGGATAGTCACTCCATGGACTGATGAACGCATGAAGTGATGTAAAAATCTGACTATTGTGGTTTCTGAAGAGGAGATGGCCAACAAGAGGACTTCTCTGAGTAAGAGTGATTGAAGATTAAGACACATATATAGAAGTGGCGCTGTGGTCTTGACAGTTGAAAATATTGAAAACTTAAACCGACTACCTTATGGGTTTTTTTTTTTTTTTTTTTAGATCTGGAAAAACCAAAATTAAGTTAACCAACAGACCTTTCTTTAAATTAACTTACAATTTTTGTTACAGTCAGCTTCCTTAGTTCATTGGGTGTGACTTTGCGCCCTTAATTATCCAGTTGTGAGGTATTGGTTCTGAAAAACAAATCCAAGTCTTGCTGTTTTGGATTTGTAATTGAACATCTCTTGTTAGAATGAATAGCCACTGTAGTTTCTTTTACCTGATTGTGCCAAGAGCTCCGCATGATGTTCAAAATTTTCCTCTTGATAGACAGCCTAAAATATTCTTGTTGGGTTAAAAAAATTCCCGCCTTAATTCTTTTGTGAAATCTTAACCATATAGTTAACTCTGTCGATTCAATTTTGTAATGACCAGGAACCAGAGGAATTATTTGAAACCATCTCTCAAGCGCTGCTGTCTTCTGTTGATCGTGACTGTTTGAGTGGATGGGGAGGGCATGTCTATGTTGTGTAAGCCACTTATTCTTAATTCTCGGTTTTTAATGGTTGATATATCTCTCTGGATAGCTTATTGGTGTGTGTGTGTGTTTTTCTAAGAAGTGGTTTGTTGTGAATTGTGATTATTATGGTTCACGTTACCTTGGATGAAATAATAATATTTGTAGCAGAATATTACCTTAATACACCGTTTCTTATAAAAAAAAATAGTAGTAATAATAATGATGATAATACTTTTAACAAAACCTGTCATATGGGGAAATATGTACAATTTATTAACTGTTTTAGAGGTATGTTGGTTTCCTATTTTTTAAAATTATGCTTGTTTTCTTAGCCGTTATTTTATTTTATTTATTATTATTATTATTTTTTTTTTGTAAGATTTCACAGAAAAACAGAGGTATGAGGGTTTCCTGTTAAAAATTACATTTTCTAGTTTTAAAAATTTTGCTTGGGTTCTGAAAACATTTCAGAAAACTATTTTAATTTTTAAAAACTGAAAACCAAAAGCAAAGTAAGTATCAAACAGACCTTACCTCTCTATTTACATTTCCAATCTTTATGATGTGTTGCATGTAATTTTCAAATGCACCTCTACTGGTTTATGCTCTATTGTTTGTTATTTTCTCTGGTTAAGAATTTAAACCATTATGGTGTAAGGCAAATTAATAATAATAATAGTAATTATAATAATAAAACAATAATCTAATCTGTGGTTGCTCCCTGATAATTGGATCAACATTCCAAAAGTATCTTTTACATGTACTGAATTTTTAGGAACGGCCCTTCACAATGGTAAGATATTGTCCACTTTGAGTATAAGCTTTCCCAATGGAGATAATGTCCTTTTCACTTATATATCAATAATCTTCTACTTGATTAGCTAATATGGACTCCCAACATTTTATTCTTTTACCTTTTTCCTGTCTTCTATATATTTGTGATTCAAATTATCTTATAATGTATCTTTGTTGCAGTACGCCAACTGAAGTAAAAGAACGAATTTTGAAGGGGCGCATGGATTGATCTTTCTTCTGATGTTTGAAAGATGATTTGTTTCATGATTACTTCCAATTAGGCTGCAGCCCAGGGCAACAAAGTTCGTGAGTGAAATGCAATAGACTTTCATGCTAGGCTGGAACTTGTAATGTGCTCTATATATATTTGACATGGAGTTGGCTTTATCTAGAACACACATGAGACAATTTTTATGAAACGAAATGTGCCTTTTGGTTCCAAAAATGATCAATTTAGATTCCAAAATTTCCATTATTATATTGTCTTATCCATCTCTTGAATCAGTTCTTGTGCGGCCTCCGTTGTGAATAGAGGTTTTCAGCAAAGCGAGGCCGTCGTGGAACCGCCAAGAGGCAAGGTAAGAAATGGCTGTAAAATAATATTTGCTTGTAAGATACAGCTTACCATTTCTTTGCACAAAACCTGCCTTCTCTACCAAGAAAACTTATGACCCCTAGAATATGGAAATGTCCATGAGAGTTAGTTTCTAGGTTGCCTTTTATGTAAGTTGTCTCGCATTGAAGTAACCAGGCATTTTATCCAACCTCATATATCCTAATCCATGGCTCATGTTGCACTGTTCTCAAAGATTTTTATCCTTTGTAATGGGAGAGCAAGAGGATAAGCAGCAGCTCCCCCAAAGGATTTCCCTTGGTTATGTGGAACAGGTGAACTCAGATTTGATCATGGCCTTGGCAATGCAACAGCAGGAGCATGAGATGGCCTATACGACGCTTGGGACCATCGAAAGTGATAGCGACGAAGACGAAGACGAAAGGTCTGATTCCAATAGCAACAATGGTCTCGACACCAATGCCTCCTTGCAAAGCCAATTTCTTGCAGATGATGAGGAGACTAATGAAAACGAAGATATGGCTGAAGATGATGACGAGGGATATGAGGATTTTGATTTCGATGAGCTAACATATGAAGAGTTGATTGCATTAGGGGAGCTGATTGGAGAAGAAAAGAGAGGGTTACCGTTGAACGAAATACCTTCATGCTTGCACTCGAGCAAGTTTCAAAGCATTGAAAATACAAGCGGTATAGATCGGTGTGTGATTTGCCAAGTTGAATATGAGGATGGTGAAGACTTGGCTGCCCTTCCTTGTGAGCATCCTTACCATTCAGAGTGTATAGTAAAATGGGTTCAAATCAAAAGGGTTTGTCCAATATGTGGCACAGAAGTTTCTTCACCCCACAAGGCTTCTAAAAATGCATAATCTCTTACAAAATTGTGACATTTCTAATGGCAAAAGGGGAAGGGTTAGATAAATGTTCTTATACTTATAGTTATGTAAAATCTGTCACAATGTTACGTATTCATCTAGGTTCCAAATAAAAGTGGTCGATCTTGACCCTTGAACATTAACATTGAGTCGTTCATAAAGTCTAGGGCATATAGTTATG

mRNA sequence

TATGGGTTTAGAAGAAAAAACCCGAAAAAATCCGATAATTTTAAGAATTAATTAGAAAATAAGAAAACAAGAAAGCTGGAGAAGCCAGAAGTTGGAGTGAAGCCCAAGCCATCAATAGCTATACTATAAACCAGTGCGTCGCTCGTTTCCCGCATTCTTCTCTGCGATTCAACTCCCTCTTCTCTCAGATTCTTATAATTTGATCGGGGAAAGCTTGAGTTTCGGACCTGATGTCGATCTTTGAGTATAATGGAAGTGCTGTTGTTGCGATGGTGGGGAAGAATTGCTTTGCCATTGCTAGTGATCGTAGGCTTGGTGTTCAACTGCAGACTATTGCCACAGATTTCCAGAAAATTTACAGGATTCATGATAAGCTGTTTCTCGGCCTTTCGGGCCTGGGTACCGATGCTCAGACAATGTATCAACGGCTTGTCTATCAGCACAAACTGTACCAACTTCGAGAAGAGAGGGACATGAAGCCGGAGACATTTGCTAGCCTTGTCTCAGCTCGTCTTTATGAGAAAAGGTTTGGTCCATACTTCTGTCAACCTGTAATTGCTGGATTGAGTGATGAAGACAAACCCTTCATTTGCACGATGGATTCCATTGGGGCTAAAGAGCTTGCTAAGGATTTTGTTGTTTCTGGCACTGCATCAGAGTCCCTTTATGGTGCTTGTGAGGCGATGTTTAAACCTGACATGGAACCAGAGGAATTATTTGAAACCATCTCTCAAGCGCTGCTGTCTTCTGTTGATCGTGACTGTTTGAGTGGATGGGGAGGGCATGTCTATGTTGTTACGCCAACTGAAGTAAAAGAACGAATTTTGAAGGGGCGCATGGATTGATCTTTCTTCTGATGTTTGAAAGATGATTTGTTTCATGATTACTTCCAATTAGGCTGCAGCCCAGGGCAACAAAGTTCGTGAGTGAAATGCAATAGACTTTCATGCTAGGCTGGAACTTGTAATGTGCTCTATATATATTTGACATGGAGTTGGCTTTATCTAGAACACACATGAGACAATTTTTATGAAACGAAATGTGCCTTTTGGTTCCAAAAATGATCAATTTAGATTCCAAAATTTCCATTATTATATTGTCTTATCCATCTCTTGAATCAGTTCTTGTGCGGCCTCCGTTGTGAATAGAGGTTTTCAGCAAAGCGAGGCCGTCGTGGAACCGCCAAGAGGCAAGAGGATAAGCAGCAGCTCCCCCAAAGGATTTCCCTTGGTTATGTGGAACAGGTGAACTCAGATTTGATCATGGCCTTGGCAATGCAACAGCAGGAGCATGAGATGGCCTATACGACGCTTGGGACCATCGAAAGTGATAGCGACGAAGACGAAGACGAAAGGTCTGATTCCAATAGCAACAATGGTCTCGACACCAATGCCTCCTTGCAAAGCCAATTTCTTGCAGATGATGAGGAGACTAATGAAAACGAAGATATGGCTGAAGATGATGACGAGGGATATGAGGATTTTGATTTCGATGAGCTAACATATGAAGAGTTGATTGCATTAGGGGAGCTGATTGGAGAAGAAAAGAGAGGGTTACCGTTGAACGAAATACCTTCATGCTTGCACTCGAGCAAGTTTCAAAGCATTGAAAATACAAGCGGTATAGATCGGTGTGTGATTTGCCAAGTTGAATATGAGGATGGTGAAGACTTGGCTGCCCTTCCTTGTGAGCATCCTTACCATTCAGAGTGTATAGTAAAATGGGTTCAAATCAAAAGGGTTTGTCCAATATGTGGCACAGAAGTTTCTTCACCCCACAAGGCTTCTAAAAATGCATAATCTCTTACAAAATTGTGACATTTCTAATGGCAAAAGGGGAAGGGTTAGATAAATGTTCTTATACTTATAGTTATGTAAAATCTGTCACAATGTTACGTATTCATCTAGGTTCCAAATAAAAGTGGTCGATCTTGACCCTTGAACATTAACATTGAGTCGTTCATAAAGTCTAGGGCATATAGTTATG

Coding sequence (CDS)

ATGTCGATCTTTGAGTATAATGGAAGTGCTGTTGTTGCGATGGTGGGGAAGAATTGCTTTGCCATTGCTAGTGATCGTAGGCTTGGTGTTCAACTGCAGACTATTGCCACAGATTTCCAGAAAATTTACAGGATTCATGATAAGCTGTTTCTCGGCCTTTCGGGCCTGGGTACCGATGCTCAGACAATGTATCAACGGCTTGTCTATCAGCACAAACTGTACCAACTTCGAGAAGAGAGGGACATGAAGCCGGAGACATTTGCTAGCCTTGTCTCAGCTCGTCTTTATGAGAAAAGGTTTGGTCCATACTTCTGTCAACCTGTAATTGCTGGATTGAGTGATGAAGACAAACCCTTCATTTGCACGATGGATTCCATTGGGGCTAAAGAGCTTGCTAAGGATTTTGTTGTTTCTGGCACTGCATCAGAGTCCCTTTATGGTGCTTGTGAGGCGATGTTTAAACCTGACATGGAACCAGAGGAATTATTTGAAACCATCTCTCAAGCGCTGCTGTCTTCTGTTGATCGTGACTGTTTGAGTGGATGGGGAGGGCATGTCTATGTTGTTACGCCAACTGAAGTAAAAGAACGAATTTTGAAGGGGCGCATGGATTGA

Protein sequence

MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDAQTMYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFICTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD

Homology

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BLAST of Cp4.1LG13g04440 vs. ExPASy Swiss-Prot
Match: Q9XI05 (Proteasome subunit beta type-3-A OS=Arabidopsis thaliana OX=3702 GN=PBC1 PE=1 SV=2)

HSP 1 Score: 385.6 bits (989), Expect = 3.6e-106
Identity = 185/204 (90.69%), Postives = 197/204 (96.57%), Query Frame = 0


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQ+I +IHD++F+GLSGL TD 
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRVFIGLSGLATDV 60

Query: 61  QTMYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI 120
           QT+YQRLV++HKLYQLREERDMKPETFASLVSA LYEKRFGPY CQPVIAGL D+DKPFI
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYLCQPVIAGLGDDDKPFI 120

Query: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS 180
           CTMDSIGAKELAKDFVVSGTASESLYGACEAM+KPDME EELFETISQALLSSVDRDCLS
Sbjct: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMYKPDMEAEELFETISQALLSSVDRDCLS 180

Query: 181 GWGGHVYVVTPTEVKERILKGRMD 205
           GWGGHVY+VTPTE+KERILKGRMD
Sbjct: 181 GWGGHVYIVTPTEIKERILKGRMD 204

[Close]

BLAST of Cp4.1LG13g04440 vs. ExPASy Swiss-Prot
Match: O81153 (Proteasome subunit beta type-3-B OS=Arabidopsis thaliana OX=3702 GN=PBC2 PE=1 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 5.1e-105
Identity = 186/204 (91.18%), Postives = 195/204 (95.59%), Query Frame = 0


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQ+I +IHD LF+GLSGL TD 
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDV 60

Query: 61  QTMYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI 120
           QT+YQRLV++HKLYQLREERDMKPETFASLVSA LYEKRFGP+ CQPVIAGL D++KPFI
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFLCQPVIAGLGDDNKPFI 120

Query: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS 180
           CTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDME EELFETISQALLSSVDRDCLS
Sbjct: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEAEELFETISQALLSSVDRDCLS 180

Query: 181 GWGGHVYVVTPTEVKERILKGRMD 205
           GWGGHVYVVTP EVKERILKGRMD
Sbjct: 181 GWGGHVYVVTPKEVKERILKGRMD 204

[Close]

BLAST of Cp4.1LG13g04440 vs. ExPASy Swiss-Prot
Match: O65084 (Proteasome subunit beta type-3 OS=Picea mariana OX=3335 GN=PBC1 PE=2 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 3.1e-102
Identity = 175/204 (85.78%), Postives = 195/204 (95.59%), Query Frame = 0


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSA+VAMVGKNCFAIASDRRLGVQLQTIATDFQ+I++IHDKL++GLSGL TD 
Sbjct: 1   MSIFEYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRIFKIHDKLYVGLSGLATDV 60

Query: 61  QTMYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI 120
           QT+YQR  ++HKLYQLREER+M+PETFASLVSA LYEKRFGPYFCQPVIAGL ++DKPFI
Sbjct: 61  QTLYQRFAFRHKLYQLREERNMRPETFASLVSALLYEKRFGPYFCQPVIAGLGEDDKPFI 120

Query: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS 180
           CTMDSIGAKELAKDFVV+GTA+ESLYGACE+M+KPDMEPEELFETISQALLSS+DRDCLS
Sbjct: 121 CTMDSIGAKELAKDFVVAGTAAESLYGACESMYKPDMEPEELFETISQALLSSIDRDCLS 180

Query: 181 GWGGHVYVVTPTEVKERILKGRMD 205
           GWGGHVYVV+P +V ER LKGRMD
Sbjct: 181 GWGGHVYVVSPNQVIERTLKGRMD 204

[Close]

BLAST of Cp4.1LG13g04440 vs. ExPASy Swiss-Prot
Match: Q9LST7 (Proteasome subunit beta type-3 OS=Oryza sativa subsp. japonica OX=39947 GN=PBC1 PE=2 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 1.2e-101
Identity = 175/204 (85.78%), Postives = 196/204 (96.08%), Query Frame = 0


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQT+ATDFQ++++IHDKL++GLSGL TDA
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATDA 60

Query: 61  QTMYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI 120
           QT+YQRLV++HKLYQLREERDMKP+TFASLVSA LYEKRFGPYFCQPVIAGL ++++PFI
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPQTFASLVSALLYEKRFGPYFCQPVIAGLGEDNEPFI 120

Query: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS 180
           CTMD IGAKELAKDFVVSGTASESLYGACE+M+KP+MEPEELFETISQAL SSVDRDCLS
Sbjct: 121 CTMDCIGAKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALQSSVDRDCLS 180

Query: 181 GWGGHVYVVTPTEVKERILKGRMD 205
           GWGG V +VTPTEVKE ++KGRMD
Sbjct: 181 GWGGFVLLVTPTEVKECVIKGRMD 204

[Close]

BLAST of Cp4.1LG13g04440 vs. ExPASy Swiss-Prot
Match: Q9Y7T8 (Probable proteasome subunit beta type-3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pup3 PE=3 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 7.7e-69
Identity = 119/204 (58.33%), Postives = 162/204 (79.41%), Query Frame = 0


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSI EYNG + VAM GKNC AIASD RLGVQ  ++  +F K++ + DK +LGL+GL TD 
Sbjct: 1   MSIMEYNGGSCVAMAGKNCVAIASDLRLGVQSISLTNNFPKVFAMGDKTYLGLTGLATDV 60

Query: 61  QTMYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI 120
           QT+Y+   Y+  LY+ REER ++P+TFA+LVS+ LYEKRFGPYF  PV+AG+S+++ PFI
Sbjct: 61  QTLYELFRYKVNLYKFREERQIQPKTFANLVSSTLYEKRFGPYFSFPVVAGVSNDNTPFI 120

Query: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS 180
           C  DSIG  + A+DF+VSGTA+E LYG CE++++P++EP++LFETISQALL++ DRDC+S
Sbjct: 121 CGFDSIGCIDFAEDFIVSGTATEQLYGMCESVYEPNLEPDDLFETISQALLNAQDRDCIS 180

Query: 181 GWGGHVYVVTPTEVKERILKGRMD 205
           GWG  VYV+T  +  +R++KGR D
Sbjct: 181 GWGCVVYVITADKCIKRLVKGRQD 204

[Close]

BLAST of Cp4.1LG13g04440 vs. NCBI nr
Match: XP_023551487.1 (proteasome subunit beta type-3-A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 414 bits (1065), Expect = 4.00e-146
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60

Query: 61  QTMYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI 120
           QTMYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI
Sbjct: 61  QTMYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI 120

Query: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS 180
           CTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS
Sbjct: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS 180

Query: 181 GWGGHVYVVTPTEVKERILKGRMD 204
           GWGGHVYVVTPTEVKERILKGRMD
Sbjct: 181 GWGGHVYVVTPTEVKERILKGRMD 204

[Close]

BLAST of Cp4.1LG13g04440 vs. NCBI nr
Match: XP_022939821.1 (proteasome subunit beta type-3-A [Cucurbita moschata] >XP_022993932.1 proteasome subunit beta type-3-A [Cucurbita maxima])

HSP 1 Score: 412 bits (1060), Expect = 2.32e-145
Identity = 203/204 (99.51%), Postives = 203/204 (99.51%), Query Frame = 0


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60

Query: 61  QTMYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI 120
           QTMYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI
Sbjct: 61  QTMYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI 120

Query: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS 180
           CTMD IGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS
Sbjct: 121 CTMDCIGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS 180

Query: 181 GWGGHVYVVTPTEVKERILKGRMD 204
           GWGGHVYVVTPTEVKERILKGRMD
Sbjct: 181 GWGGHVYVVTPTEVKERILKGRMD 204

[Close]

BLAST of Cp4.1LG13g04440 vs. NCBI nr
Match: XP_022141537.1 (proteasome subunit beta type-3-A [Momordica charantia])

HSP 1 Score: 412 bits (1059), Expect = 3.29e-145
Identity = 201/204 (98.53%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQT+ATDFQKIYRIHDKLFLGLSGLGTDA
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQKIYRIHDKLFLGLSGLGTDA 60

Query: 61  QTMYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI 120
           QT+YQR+VYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI
Sbjct: 61  QTLYQRIVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI 120

Query: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS 180
           CTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS
Sbjct: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS 180

Query: 181 GWGGHVYVVTPTEVKERILKGRMD 204
           GWGGHVYVVTPTEVKERILKGRMD
Sbjct: 181 GWGGHVYVVTPTEVKERILKGRMD 204

[Close]

BLAST of Cp4.1LG13g04440 vs. NCBI nr
Match: XP_038886325.1 (proteasome subunit beta type-3-A [Benincasa hispida])

HSP 1 Score: 412 bits (1059), Expect = 3.29e-145
Identity = 202/204 (99.02%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSAVVAMVGKNCF+IASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFSIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60

Query: 61  QTMYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI 120
           QT+YQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI
Sbjct: 61  QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI 120

Query: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS 180
           CTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS
Sbjct: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS 180

Query: 181 GWGGHVYVVTPTEVKERILKGRMD 204
           GWGGHVYVVTPTEVKERILKGRMD
Sbjct: 181 GWGGHVYVVTPTEVKERILKGRMD 204

[Close]

BLAST of Cp4.1LG13g04440 vs. NCBI nr
Match: XP_022991148.1 (proteasome subunit beta type-3-A-like isoform X1 [Cucurbita maxima] >XP_023523704.1 proteasome subunit beta type-3-A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 410 bits (1053), Expect = 2.71e-144
Identity = 201/204 (98.53%), Postives = 202/204 (99.02%), Query Frame = 0


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSAVVAMVGKNCFAIASDRR GVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRFGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60

Query: 61  QTMYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI 120
           QT+YQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI
Sbjct: 61  QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI 120

Query: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS 180
           CTMD IGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS
Sbjct: 121 CTMDCIGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS 180

Query: 181 GWGGHVYVVTPTEVKERILKGRMD 204
           GWGGHVYVVTPTEVKERILKGRMD
Sbjct: 181 GWGGHVYVVTPTEVKERILKGRMD 204

[Close]

BLAST of Cp4.1LG13g04440 vs. ExPASy TrEMBL
Match: A0A6J1JUA3 (Proteasome subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111489782 PE=3 SV=1)

HSP 1 Score: 412 bits (1060), Expect = 1.12e-145
Identity = 203/204 (99.51%), Postives = 203/204 (99.51%), Query Frame = 0


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60

Query: 61  QTMYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI 120
           QTMYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI
Sbjct: 61  QTMYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI 120

Query: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS 180
           CTMD IGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS
Sbjct: 121 CTMDCIGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS 180

Query: 181 GWGGHVYVVTPTEVKERILKGRMD 204
           GWGGHVYVVTPTEVKERILKGRMD
Sbjct: 181 GWGGHVYVVTPTEVKERILKGRMD 204

[Close]

BLAST of Cp4.1LG13g04440 vs. ExPASy TrEMBL
Match: A0A6J1FGX2 (Proteasome subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111445581 PE=3 SV=1)

HSP 1 Score: 412 bits (1060), Expect = 1.12e-145
Identity = 203/204 (99.51%), Postives = 203/204 (99.51%), Query Frame = 0


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60

Query: 61  QTMYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI 120
           QTMYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI
Sbjct: 61  QTMYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI 120

Query: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS 180
           CTMD IGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS
Sbjct: 121 CTMDCIGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS 180

Query: 181 GWGGHVYVVTPTEVKERILKGRMD 204
           GWGGHVYVVTPTEVKERILKGRMD
Sbjct: 181 GWGGHVYVVTPTEVKERILKGRMD 204

[Close]

BLAST of Cp4.1LG13g04440 vs. ExPASy TrEMBL
Match: A0A6J1CK40 (Proteasome subunit beta OS=Momordica charantia OX=3673 GN=LOC111011884 PE=3 SV=1)

HSP 1 Score: 412 bits (1059), Expect = 1.59e-145
Identity = 201/204 (98.53%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQT+ATDFQKIYRIHDKLFLGLSGLGTDA
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQKIYRIHDKLFLGLSGLGTDA 60

Query: 61  QTMYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI 120
           QT+YQR+VYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI
Sbjct: 61  QTLYQRIVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI 120

Query: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS 180
           CTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS
Sbjct: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS 180

Query: 181 GWGGHVYVVTPTEVKERILKGRMD 204
           GWGGHVYVVTPTEVKERILKGRMD
Sbjct: 181 GWGGHVYVVTPTEVKERILKGRMD 204

[Close]

BLAST of Cp4.1LG13g04440 vs. ExPASy TrEMBL
Match: A0A6J1JVC3 (Proteasome subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111487832 PE=3 SV=1)

HSP 1 Score: 410 bits (1053), Expect = 1.31e-144
Identity = 201/204 (98.53%), Postives = 202/204 (99.02%), Query Frame = 0


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSAVVAMVGKNCFAIASDRR GVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRFGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60

Query: 61  QTMYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI 120
           QT+YQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI
Sbjct: 61  QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI 120

Query: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS 180
           CTMD IGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS
Sbjct: 121 CTMDCIGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS 180

Query: 181 GWGGHVYVVTPTEVKERILKGRMD 204
           GWGGHVYVVTPTEVKERILKGRMD
Sbjct: 181 GWGGHVYVVTPTEVKERILKGRMD 204

[Close]

BLAST of Cp4.1LG13g04440 vs. ExPASy TrEMBL
Match: A0A6J1GSE0 (Proteasome subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111457011 PE=3 SV=1)

HSP 1 Score: 409 bits (1050), Expect = 3.76e-144
Identity = 200/204 (98.04%), Postives = 202/204 (99.02%), Query Frame = 0


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSAVVAMVGKNCFAIASDRR GVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRFGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60

Query: 61  QTMYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI 120
           QT+YQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI
Sbjct: 61  QTLYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI 120

Query: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS 180
           CTMD IGAKELAKDFVVSGTASESLYGACEAMFKPD+EPEELFETISQALLSSVDRDCLS
Sbjct: 121 CTMDCIGAKELAKDFVVSGTASESLYGACEAMFKPDLEPEELFETISQALLSSVDRDCLS 180

Query: 181 GWGGHVYVVTPTEVKERILKGRMD 204
           GWGGHVYVVTPTEVKERILKGRMD
Sbjct: 181 GWGGHVYVVTPTEVKERILKGRMD 204

[Close]

BLAST of Cp4.1LG13g04440 vs. TAIR 10
Match: AT1G21720.1 (proteasome beta subunit C1 )

HSP 1 Score: 385.6 bits (989), Expect = 2.5e-107
Identity = 185/204 (90.69%), Postives = 197/204 (96.57%), Query Frame = 0


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQ+I +IHD++F+GLSGL TD 
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRVFIGLSGLATDV 60

Query: 61  QTMYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI 120
           QT+YQRLV++HKLYQLREERDMKPETFASLVSA LYEKRFGPY CQPVIAGL D+DKPFI
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYLCQPVIAGLGDDDKPFI 120

Query: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS 180
           CTMDSIGAKELAKDFVVSGTASESLYGACEAM+KPDME EELFETISQALLSSVDRDCLS
Sbjct: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMYKPDMEAEELFETISQALLSSVDRDCLS 180

Query: 181 GWGGHVYVVTPTEVKERILKGRMD 205
           GWGGHVY+VTPTE+KERILKGRMD
Sbjct: 181 GWGGHVYIVTPTEIKERILKGRMD 204

[Close]

BLAST of Cp4.1LG13g04440 vs. TAIR 10
Match: AT1G77440.1 (20S proteasome beta subunit C2 )

HSP 1 Score: 381.7 bits (979), Expect = 3.6e-106
Identity = 186/204 (91.18%), Postives = 195/204 (95.59%), Query Frame = 0


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQ+I +IHD LF+GLSGL TD 
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDV 60

Query: 61  QTMYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI 120
           QT+YQRLV++HKLYQLREERDMKPETFASLVSA LYEKRFGP+ CQPVIAGL D++KPFI
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFLCQPVIAGLGDDNKPFI 120

Query: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS 180
           CTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDME EELFETISQALLSSVDRDCLS
Sbjct: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEAEELFETISQALLSSVDRDCLS 180

Query: 181 GWGGHVYVVTPTEVKERILKGRMD 205
           GWGGHVYVVTP EVKERILKGRMD
Sbjct: 181 GWGGHVYVVTPKEVKERILKGRMD 204

[Close]

BLAST of Cp4.1LG13g04440 vs. TAIR 10
Match: AT1G77440.2 (20S proteasome beta subunit C2 )

HSP 1 Score: 381.7 bits (979), Expect = 3.6e-106
Identity = 186/204 (91.18%), Postives = 195/204 (95.59%), Query Frame = 0


Query: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDA 60
           MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQ+I +IHD LF+GLSGL TD 
Sbjct: 1   MSIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDV 60

Query: 61  QTMYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFI 120
           QT+YQRLV++HKLYQLREERDMKPETFASLVSA LYEKRFGP+ CQPVIAGL D++KPFI
Sbjct: 61  QTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFLCQPVIAGLGDDNKPFI 120

Query: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEPEELFETISQALLSSVDRDCLS 180
           CTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDME EELFETISQALLSSVDRDCLS
Sbjct: 121 CTMDSIGAKELAKDFVVSGTASESLYGACEAMFKPDMEAEELFETISQALLSSVDRDCLS 180

Query: 181 GWGGHVYVVTPTEVKERILKGRMD 205
           GWGGHVYVVTP EVKERILKGRMD
Sbjct: 181 GWGGHVYVVTPKEVKERILKGRMD 204

[Close]

BLAST of Cp4.1LG13g04440 vs. TAIR 10
Match: AT3G60820.1 (N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein )

HSP 1 Score: 89.0 bits (219), Expect = 4.9e-18
Identity = 55/216 (25.46%), Postives = 100/216 (46.30%), Query Frame = 0


Query: 2   SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDAQ 61
           S ++ NG   VA+ G +   IA+D R+      ++ D+ KI+++ D+  L  SG   D +
Sbjct: 9   SPYDNNGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGFQADVK 68

Query: 62  TMYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFIC 121
            + + L  +H +YQ +  + M     A L+S  LY KRF PY+   V+ GL +E K  + 
Sbjct: 69  ALQKVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDEEGKGCVF 128

Query: 122 TMDSIGAKELAKDFVVSGTASESLYGACEAMFK---PDMEPE----------ELFETISQ 181
           T D++G+ E    +   G+ S  +    +   K   P + P+          E  + +  
Sbjct: 129 TYDAVGSYERV-GYGAQGSGSTLIMPFLDNQLKSPSPLLLPKQDSNTPLSEAEAVDLVKT 188

Query: 182 ALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD 205
              S+ +RD  +G    + ++    +K  ++  R D
Sbjct: 189 VFASATERDIYTGDKLEIMILKADGIKTELMDLRKD 223

[Close]

BLAST of Cp4.1LG13g04440 vs. TAIR 10
Match: AT3G60820.3 (N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein )

HSP 1 Score: 89.0 bits (219), Expect = 4.9e-18
Identity = 55/216 (25.46%), Postives = 100/216 (46.30%), Query Frame = 0


Query: 2   SIFEYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQKIYRIHDKLFLGLSGLGTDAQ 61
           S ++ NG   VA+ G +   IA+D R+      ++ D+ KI+++ D+  L  SG   D +
Sbjct: 9   SPYDNNGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGFQADVK 68

Query: 62  TMYQRLVYQHKLYQLREERDMKPETFASLVSARLYEKRFGPYFCQPVIAGLSDEDKPFIC 121
            + + L  +H +YQ +  + M     A L+S  LY KRF PY+   V+ GL +E K  + 
Sbjct: 69  ALQKVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDEEGKGCVF 128

Query: 122 TMDSIGAKELAKDFVVSGTASESLYGACEAMFK---PDMEPE----------ELFETISQ 181
           T D++G+ E    +   G+ S  +    +   K   P + P+          E  + +  
Sbjct: 129 TYDAVGSYERV-GYGAQGSGSTLIMPFLDNQLKSPSPLLLPKQDSNTPLSEAEAVDLVKT 188

Query: 182 ALLSSVDRDCLSGWGGHVYVVTPTEVKERILKGRMD 205
              S+ +RD  +G    + ++    +K  ++  R D
Sbjct: 189 VFASATERDIYTGDKLEIMILKADGIKTELMDLRKD 223

The following BLAST results are available for this feature:

BLAST of Cp4.1LG13g04440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XI05	3.6e-106	90.69	Proteasome subunit beta type-3-A OS=Arabidopsis thaliana OX=3702 GN=PBC1 PE=1 SV...	[more]
O81153	5.1e-105	91.18	Proteasome subunit beta type-3-B OS=Arabidopsis thaliana OX=3702 GN=PBC2 PE=1 SV...	[more]
O65084	3.1e-102	85.78	Proteasome subunit beta type-3 OS=Picea mariana OX=3335 GN=PBC1 PE=2 SV=1	[more]
Q9LST7	1.2e-101	85.78	Proteasome subunit beta type-3 OS=Oryza sativa subsp. japonica OX=39947 GN=PBC1 ...	[more]
Q9Y7T8	7.7e-69	58.33	Probable proteasome subunit beta type-3 OS=Schizosaccharomyces pombe (strain 972...	[more]

BLAST of Cp4.1LG13g04440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023551487.1	4.00e-146	100.00	proteasome subunit beta type-3-A [Cucurbita pepo subsp. pepo]	[more]
XP_022939821.1	2.32e-145	99.51	proteasome subunit beta type-3-A [Cucurbita moschata] >XP_022993932.1 proteasome...	[more]
XP_022141537.1	3.29e-145	98.53	proteasome subunit beta type-3-A [Momordica charantia]	[more]
XP_038886325.1	3.29e-145	99.02	proteasome subunit beta type-3-A [Benincasa hispida]	[more]
XP_022991148.1	2.71e-144	98.53	proteasome subunit beta type-3-A-like isoform X1 [Cucurbita maxima] >XP_02352370...	[more]

BLAST of Cp4.1LG13g04440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JUA3	1.12e-145	99.51	Proteasome subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111489782 PE=3 SV=1	[more]
A0A6J1FGX2	1.12e-145	99.51	Proteasome subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111445581 PE=3 SV=1	[more]
A0A6J1CK40	1.59e-145	98.53	Proteasome subunit beta OS=Momordica charantia OX=3673 GN=LOC111011884 PE=3 SV=1	[more]
A0A6J1JVC3	1.31e-144	98.53	Proteasome subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111487832 PE=3 SV=1	[more]
A0A6J1GSE0	3.76e-144	98.04	Proteasome subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111457011 PE=3 SV=1	[more]

BLAST of Cp4.1LG13g04440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G21720.1	2.5e-107	90.69	proteasome beta subunit C1	[more]
AT1G77440.1	3.6e-106	91.18	20S proteasome beta subunit C2	[more]
AT1G77440.2	3.6e-106	91.18	20S proteasome beta subunit C2	[more]
AT3G60820.1	4.9e-18	25.46	N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein	[more]
AT3G60820.3	4.9e-18	25.46	N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001353	Proteasome, subunit alpha/beta	PFAM	PF00227	Proteasome	coord: 7..189 e-value: 1.9E-43 score: 148.1
IPR029055	Nucleophile aminohydrolases, N-terminal	GENE3D	3.60.20.10	Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1	coord: 1..204 e-value: 2.2E-55 score: 189.3
IPR029055	Nucleophile aminohydrolases, N-terminal	SUPERFAMILY	56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)	coord: 4..204
None	No IPR available	PANTHER	PTHR11599:SF155	PROTEASOME SUBUNIT BETA	coord: 4..198
None	No IPR available	PANTHER	PTHR11599	PROTEASOME SUBUNIT ALPHA/BETA	coord: 4..198
IPR016050	Proteasome beta-type subunit, conserved site	PROSITE	PS00854	PROTEASOME_BETA_1	coord: 12..59
IPR023333	Proteasome B-type subunit	PROSITE	PS51476	PROTEASOME_BETA_2	coord: 8..189 score: 48.65493
IPR033811	Proteasome beta 3 subunit	CDD	cd03759	proteasome_beta_type_3	coord: 6..200 e-value: 7.95382E-131 score: 363.871

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG13g04440.1	Cp4.1LG13g04440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process	GO:0051603	proteolysis involved in cellular protein catabolic process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
cellular_component	GO:0019774	proteasome core complex, beta-subunit complex
cellular_component	GO:0005839	proteasome core complex
molecular_function	GO:0004298	threonine-type endopeptidase activity