Cp4.1LG13g04400 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG13g04400
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	basic blue protein-like
Location	Cp4.1LG13: 6215648 .. 6217391 (-)
RNA-Seq Expression	Cp4.1LG13g04400
Synteny	Cp4.1LG13g04400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GCACCATTTCCAAAATTGAATGAAATAAAGAAGGCAGGCGTGTGGAAGGAAGCCAAGGGGTTGCGCTCCGACGACACTGTCAGCCAGATTGGAATAAATTCCAAGCTCCTAAAGTCTAAAATTGTGGGCACCGCCGATCAGTGGAAGTGGTTGGGTGAAATTAATACGGTAACACATTGCCTTGTACAAAGCTCACCAACTTTCCTAATTTTTGTGTACCCTATTCGTTTCCTTATTTATAACCCCCAAGTTAATTCCACCCAAATTGACCACAAACTAAAAAAGCTAAGGCTCCGGAGGAAAGAAATATGGGAAGAGGCAGTGCAGTCGGTAGCGCCCTCGTTGTTGCTGCTGTTATCGGGTTGGTTATGATGTCTCAGTTGGAGAGCGTGGAGGCAGCCGTTTACACTGTCGGCGACGCCGGTGGATGGACTTTTAATGTCCAAGGTTGGCCCAACGGCAAACACTTTCGTGCTGGCGATACTCTCAGTAAGCTCCTCCACCATTTTTTTTTTTTTTTTTTTTTTTATTAAAGGAAAATATGGACAAAGTTTGTACTACAATATCATACCGTTGTGGATAGTCGTGATTCCTGACATGTTATCAGAGTCATGCCCCTAACTGGGACAATATCGTACCATTGTGGAGACTTGTGATTCCTGGCATGGTATCAGAGTCATGCCCCTAATTGGGACAATATCGTACCACCTAATTGGGACAATATCGTACCATTGTGGAGAGTCGGATTCCTAATATGGTATCAGAGCCATGCTCTTAACTTAGCAGGTCAATAAAATCCTCAAATGTCAAACAAAAAAAGTTATATAGGCCTCAGGAGAGGCTCTATGGTGTACTTGGCTATATAGGCCTCAGGAGAGGCTCTATGGTGTACTTGGCTATATAGGCCTCAGGAGAGGCTCTATGGTGTACTTGGCTATATAGGCCTCAGGAGAGGCTCTATGGTGTACTTGGCTATATAGGCCTCAGGAGAGGCTCTATGGTGTACTTGGCTATATAGGCCTCAGGAGAGGCTCTATGGTGTACTTGGCTATATAGGCCTCAGGAGAGGCTCTATGGTGTACTTGGCTATATAGGCCTCAGGAGAGGCTCTATGGTGTACTTGGCTATATAGGCCTCAGGAGAGGCTCTATGGTGTACTTGGCTATATAGGCCTCAGGAGAGGCTCTATGGTGTACTTGGCTCGATGGGAGGATGGTTGAGGATTATTGAAAGGGAGTCAAAAGACATTGACTAATCTAACGAATGATCCTGTTGGTACGAGATCTTTTAAAAGACATTGACTAATCTAACGAATGATCCTGTTGGTACGAGATCTTTTGAAGAAACCAGAGAGTTATATGGTCAAAGTGAACAATATCATTCTATTGTGAAGAATCTTATCTGACAAAATATTTGTTTGCAGAGTTCAATTACGACCGGACAATTCATAACGTGGTGGTGGTGAACCAAGGTGGGTACACGAGCTGCCGGACTCCGGCGGGAGCGAAAGTTTTCACCTCCGGTAGCGACCAGATAAAGCTGGCGAAGGGAATGAACTATTTCATCTGCAACTTCCCCGGCCACTGTGAATCCGGCATGAAGATTGCCGTGAATGCTCTCTAAATCTGTACCCCCTTTTAAAAACTTTATTTACCGCTGTTAAAATAAAATAACCGTCCGTAATTTATACAGTGGGAGTGTTTGCTTTGTAGTTCAAATGTCATTTCCTTGTCGGGAGCTTATA

mRNA sequence

GCACCATTTCCAAAATTGAATGAAATAAAGAAGGCAGGCGTGTGGAAGGAAGCCAAGGGGTTGCGCTCCGACGACACTGTCAGCCAGATTGGAATAAATTCCAAGCTCCTAAAGTCTAAAATTGTGGGCACCGCCGATCAGTGGAAGTGGTTGGGTGAAATTAATACGGCTCCGGAGGAAAGAAATATGGGAAGAGGCAGTGCAGTCGGTAGCGCCCTCGTTGTTGCTGCTGTTATCGGGTTGGTTATGATGTCTCAGTTGGAGAGCGTGGAGGCAGCCGTTTACACTGTCGGCGACGCCGGTGGATGGACTTTTAATGTCCAAGGTTGGCCCAACGGCAAACACTTTCGTGCTGGCGATACTCTCATTCAAATGTCATTTCCTTGTCGGGAGCTTATA

Coding sequence (CDS)

GCACCATTTCCAAAATTGAATGAAATAAAGAAGGCAGGCGTGTGGAAGGAAGCCAAGGGGTTGCGCTCCGACGACACTGTCAGCCAGATTGGAATAAATTCCAAGCTCCTAAAGTCTAAAATTGTGGGCACCGCCGATCAGTGGAAGTGGTTGGGTGAAATTAATACGGCTCCGGAGGAAAGAAATATGGGAAGAGGCAGTGCAGTCGGTAGCGCCCTCGTTGTTGCTGCTGTTATCGGGTTGGTTATGATGTCTCAGTTGGAGAGCGTGGAGGCAGCCGTTTACACTGTCGGCGACGCCGGTGGATGGACTTTTAATGTCCAAGGTTGGCCCAACGGCAAACACTTTCGTGCTGGCGATACTCTCATTCAAATGTCATTTCCTTGTCGGGAGCTTATA

Protein sequence

APFPKLNEIKKAGVWKEAKGLRSDDTVSQIGINSKLLKSKIVGTADQWKWLGEINTAPEERNMGRGSAVGSALVVAAVIGLVMMSQLESVEAAVYTVGDAGGWTFNVQGWPNGKHFRAGDTLIQMSFPCRELI

Homology

[Close]

BLAST of Cp4.1LG13g04400 vs. ExPASy Swiss-Prot
Match: Q8LG89 (Basic blue protein OS=Arabidopsis thaliana OX=3702 GN=ARPN PE=2 SV=2)

HSP 1 Score: 72.0 bits (175), Expect = 5.7e-12
Identity = 34/61 (55.74%), Postives = 44/61 (72.13%), Query Frame = 0


Query: 64  GRGSAVGSALVVAAVIGL-VMMSQLESVEAAVYTVGDAGGWTFNVQGWPNGKHFRAGDTL 123
           GRGSA  SA  +  ++ + V++ Q + V+AA YTVGD+G WTFN  GWP GKHFRAGD L
Sbjct: 4   GRGSASWSARAIVTLMAVSVLLLQADYVQAATYTVGDSGIWTFNAVGWPKGKHFRAGDVL 63

[Close]

BLAST of Cp4.1LG13g04400 vs. ExPASy Swiss-Prot
Match: P60496 (Chemocyanin OS=Lilium longiflorum OX=4690 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.2e-09
Identity = 29/61 (47.54%), Postives = 37/61 (60.66%), Query Frame = 0


Query: 63  MGRGSAVGSALVVAAVIGLVMMSQLESVEAAVYTVGDAGGWTFNVQGWPNGKHFRAGDTL 122
           M +GS      +V  V+ + ++   E  E+ VYTVGD GGWTF   GWP GK FRAGD L
Sbjct: 1   MAQGSGSAERALVLGVVLVFLVFNCEVAESVVYTVGDGGGWTFGTSGWPAGKTFRAGDVL 60

Query: 123 I 124
           +
Sbjct: 61  V 61

[Close]

BLAST of Cp4.1LG13g04400 vs. ExPASy Swiss-Prot
Match: P00303 (Basic blue protein OS=Cucumis sativus OX=3659 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.2e-06
Identity = 21/31 (67.74%), Postives = 24/31 (77.42%), Query Frame = 0


Query: 93  AVYTVGDAGGWTFNVQGWPNGKHFRAGDTLI 124
           AVY VG +GGWTFN + WP GK FRAGD L+
Sbjct: 1   AVYVVGGSGGWTFNTESWPKGKRFRAGDILL 31

[Close]

BLAST of Cp4.1LG13g04400 vs. NCBI nr
Match: KAG7016447.1 (Basic blue protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 192 bits (487), Expect = 1.56e-60
Identity = 102/121 (84.30%), Postives = 103/121 (85.12%), Query Frame = 0


Query: 3   FPKLNEIKKAGVWKEAKGLRSDDTVSQIGINSKLLKSKIVGTADQWKWLGEINTAPEERN 62
           FPKLNEIKKAGVWKEAKGLRSDD +SQIGINSKLLKSK               TAPEER 
Sbjct: 2   FPKLNEIKKAGVWKEAKGLRSDDNLSQIGINSKLLKSK---------------TAPEERI 61

Query: 63  MGRGSAVGSALVVAAVIGLVMMSQLESVEAAVYTVGDAGGWTFNVQGWPNGKHFRAGDTL 122
           MGRGSAVGSALVVAAVIGLVMMSQLESVEAAVYTVGDAGGWTFNVQ WPNGKHFRAGDTL
Sbjct: 62  MGRGSAVGSALVVAAVIGLVMMSQLESVEAAVYTVGDAGGWTFNVQDWPNGKHFRAGDTL 107

[Close]

BLAST of Cp4.1LG13g04400 vs. NCBI nr
Match: XP_023550997.1 (basic blue protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 121 bits (303), Expect = 1.98e-32
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0


Query: 63  MGRGSAVGSALVVAAVIGLVMMSQLESVEAAVYTVGDAGGWTFNVQGWPNGKHFRAGDTL 122
           MGRGSAVGSALVVAAVIGLVMMSQLESVEAAVYTVGDAGGWTFNVQGWPNGKHFRAGDTL
Sbjct: 1   MGRGSAVGSALVVAAVIGLVMMSQLESVEAAVYTVGDAGGWTFNVQGWPNGKHFRAGDTL 60

[Close]

BLAST of Cp4.1LG13g04400 vs. NCBI nr
Match: XP_022938793.1 (basic blue protein-like [Cucurbita moschata])

HSP 1 Score: 121 bits (303), Expect = 1.98e-32
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0


Query: 63  MGRGSAVGSALVVAAVIGLVMMSQLESVEAAVYTVGDAGGWTFNVQGWPNGKHFRAGDTL 122
           MGRGSAVGSALVVAAVIGLVMMSQLESVEAAVYTVGDAGGWTFNVQGWPNGKHFRAGDTL
Sbjct: 1   MGRGSAVGSALVVAAVIGLVMMSQLESVEAAVYTVGDAGGWTFNVQGWPNGKHFRAGDTL 60

[Close]

BLAST of Cp4.1LG13g04400 vs. NCBI nr
Match: XP_022993936.1 (basic blue protein-like [Cucurbita maxima])

HSP 1 Score: 114 bits (286), Expect = 7.49e-30
Identity = 57/60 (95.00%), Postives = 59/60 (98.33%), Query Frame = 0


Query: 63  MGRGSAVGSALVVAAVIGLVMMSQLESVEAAVYTVGDAGGWTFNVQGWPNGKHFRAGDTL 122
           MGRGSAVGSALVVAAVIGLVMMSQLE+VEAAVYTVGD+GGWTFNVQGWPNGK FRAGDTL
Sbjct: 1   MGRGSAVGSALVVAAVIGLVMMSQLENVEAAVYTVGDSGGWTFNVQGWPNGKLFRAGDTL 60

[Close]

BLAST of Cp4.1LG13g04400 vs. NCBI nr
Match: KAG6578926.1 (putative protein phosphatase 2C 11, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 120 bits (301), Expect = 1.48e-28
Identity = 60/61 (98.36%), Postives = 60/61 (98.36%), Query Frame = 0


Query: 63  MGRGSAVGSALVVAAVIGLVMMSQLESVEAAVYTVGDAGGWTFNVQGWPNGKHFRAGDTL 122
           MGRGSAVGSALVVAAVIGLVMMSQLESVEAAVYTVGDAGGWTFNVQ WPNGKHFRAGDTL
Sbjct: 1   MGRGSAVGSALVVAAVIGLVMMSQLESVEAAVYTVGDAGGWTFNVQAWPNGKHFRAGDTL 60

[Close]

BLAST of Cp4.1LG13g04400 vs. ExPASy TrEMBL
Match: A0A6J1FJW8 (basic blue protein-like OS=Cucurbita moschata OX=3662 GN=LOC111444901 PE=4 SV=1)

HSP 1 Score: 121 bits (303), Expect = 9.57e-33
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0


Query: 63  MGRGSAVGSALVVAAVIGLVMMSQLESVEAAVYTVGDAGGWTFNVQGWPNGKHFRAGDTL 122
           MGRGSAVGSALVVAAVIGLVMMSQLESVEAAVYTVGDAGGWTFNVQGWPNGKHFRAGDTL
Sbjct: 1   MGRGSAVGSALVVAAVIGLVMMSQLESVEAAVYTVGDAGGWTFNVQGWPNGKHFRAGDTL 60

[Close]

BLAST of Cp4.1LG13g04400 vs. ExPASy TrEMBL
Match: A0A6J1JXQ8 (basic blue protein-like OS=Cucurbita maxima OX=3661 GN=LOC111489786 PE=4 SV=1)

HSP 1 Score: 114 bits (286), Expect = 3.63e-30
Identity = 57/60 (95.00%), Postives = 59/60 (98.33%), Query Frame = 0


Query: 63  MGRGSAVGSALVVAAVIGLVMMSQLESVEAAVYTVGDAGGWTFNVQGWPNGKHFRAGDTL 122
           MGRGSAVGSALVVAAVIGLVMMSQLE+VEAAVYTVGD+GGWTFNVQGWPNGK FRAGDTL
Sbjct: 1   MGRGSAVGSALVVAAVIGLVMMSQLENVEAAVYTVGDSGGWTFNVQGWPNGKLFRAGDTL 60

[Close]

BLAST of Cp4.1LG13g04400 vs. ExPASy TrEMBL
Match: A0A6J1CKC7 (basic blue protein-like OS=Momordica charantia OX=3673 GN=LOC111011792 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 1.15e-22
Identity = 48/65 (73.85%), Postives = 54/65 (83.08%), Query Frame = 0


Query: 61  RNMGRGSA---VGSALVVAAVIGLVMMSQLESVEAAVYTVGDAGGWTFNVQGWPNGKHFR 120
           +   RGSA   +GSA+ VAAVIGLV++SQLESVEAA +TVGDAGGWTFNVQ WPNGK FR
Sbjct: 3   KGQARGSAAVGIGSAVAVAAVIGLVVLSQLESVEAATFTVGDAGGWTFNVQSWPNGKRFR 62

Query: 121 AGDTL 122
           AGD L
Sbjct: 63  AGDIL 67

[Close]

BLAST of Cp4.1LG13g04400 vs. ExPASy TrEMBL
Match: A0A0A0KCU9 (Basic blue protein OS=Cucumis sativus OX=3659 GN=Csa_6G344240 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 2.54e-21
Identity = 45/59 (76.27%), Postives = 49/59 (83.05%), Query Frame = 0


Query: 64  GRGSAVGSALVVAAVIGLVMMSQLESVEAAVYTVGDAGGWTFNVQGWPNGKHFRAGDTL 122
           GRGSA+  A+ VAAVIGLVMMSQLESVEAAVY VG +GGWTFN + WP GK FRAGD L
Sbjct: 8   GRGSAIERAVAVAAVIGLVMMSQLESVEAAVYDVGGSGGWTFNTESWPKGKRFRAGDIL 66

[Close]

BLAST of Cp4.1LG13g04400 vs. ExPASy TrEMBL
Match: A0A5A7UXE1 (Basic blue protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G00980 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 7.21e-21
Identity = 45/59 (76.27%), Postives = 48/59 (81.36%), Query Frame = 0


Query: 64  GRGSAVGSALVVAAVIGLVMMSQLESVEAAVYTVGDAGGWTFNVQGWPNGKHFRAGDTL 122
           GRGSA+G  + VAAVIGLVMMSQLESVEAAVY VG + GWTFNVQ WP G  FRAGD L
Sbjct: 8   GRGSAIGRGVAVAAVIGLVMMSQLESVEAAVYDVGGSSGWTFNVQNWPKGIRFRAGDIL 66

[Close]

BLAST of Cp4.1LG13g04400 vs. TAIR 10
Match: AT2G02850.1 (plantacyanin )

HSP 1 Score: 72.0 bits (175), Expect = 4.0e-13
Identity = 34/61 (55.74%), Postives = 44/61 (72.13%), Query Frame = 0


Query: 64  GRGSAVGSALVVAAVIGL-VMMSQLESVEAAVYTVGDAGGWTFNVQGWPNGKHFRAGDTL 123
           GRGSA  SA  +  ++ + V++ Q + V+AA YTVGD+G WTFN  GWP GKHFRAGD L
Sbjct: 4   GRGSASWSARAIVTLMAVSVLLLQADYVQAATYTVGDSGIWTFNAVGWPKGKHFRAGDVL 63

[Close]

BLAST of Cp4.1LG13g04400 vs. TAIR 10
Match: AT3G60280.1 (uclacyanin 3 )

HSP 1 Score: 42.7 bits (99), Expect = 2.6e-04
Identity = 25/59 (42.37%), Postives = 33/59 (55.93%), Query Frame = 0


Query: 66  GSAVGSALVVAAVIGLVMMSQLESVEAAVYTVGDAGGWTFNVQ--GWPNGKHFRAGDTL 123
           GS V +AL       L+ ++ + +V AA + VGD  GWT N+    W  GK FR GDTL
Sbjct: 2   GSTVAAAL-------LLFLAAVPAVFAATFKVGDISGWTSNLDYTVWLTGKTFRVGDTL 53

[Close]

BLAST of Cp4.1LG13g04400 vs. TAIR 10
Match: AT5G26330.1 (Cupredoxin superfamily protein )

HSP 1 Score: 42.7 bits (99), Expect = 2.6e-04
Identity = 24/57 (42.11%), Postives = 37/57 (64.91%), Query Frame = 0


Query: 71  SALVVAAVIGLVMMSQLESVEAAVYTVGDAGGWT----FNVQGWPNGKHFRAGDTLI 124
           +A++VAA+  +V+M +L   EAAVY VGD+ GWT     + + W + K F  GDT++
Sbjct: 2   AAIIVAALACIVVMLRLS--EAAVYKVGDSAGWTTIANVDYKLWASTKTFHIGDTVL 56

The following BLAST results are available for this feature:

BLAST of Cp4.1LG13g04400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LG89	5.7e-12	55.74	Basic blue protein OS=Arabidopsis thaliana OX=3702 GN=ARPN PE=2 SV=2	[more]
P60496	1.2e-09	47.54	Chemocyanin OS=Lilium longiflorum OX=4690 PE=1 SV=1	[more]
P00303	1.2e-06	67.74	Basic blue protein OS=Cucumis sativus OX=3659 PE=1 SV=1	[more]

BLAST of Cp4.1LG13g04400 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7016447.1	1.56e-60	84.30	Basic blue protein, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023550997.1	1.98e-32	100.00	basic blue protein-like [Cucurbita pepo subsp. pepo]	[more]
XP_022938793.1	1.98e-32	100.00	basic blue protein-like [Cucurbita moschata]	[more]
XP_022993936.1	7.49e-30	95.00	basic blue protein-like [Cucurbita maxima]	[more]
KAG6578926.1	1.48e-28	98.36	putative protein phosphatase 2C 11, partial [Cucurbita argyrosperma subsp. soror...	[more]

BLAST of Cp4.1LG13g04400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FJW8	9.57e-33	100.00	basic blue protein-like OS=Cucurbita moschata OX=3662 GN=LOC111444901 PE=4 SV=1	[more]
A0A6J1JXQ8	3.63e-30	95.00	basic blue protein-like OS=Cucurbita maxima OX=3661 GN=LOC111489786 PE=4 SV=1	[more]
A0A6J1CKC7	1.15e-22	73.85	basic blue protein-like OS=Momordica charantia OX=3673 GN=LOC111011792 PE=4 SV=1	[more]
A0A0A0KCU9	2.54e-21	76.27	Basic blue protein OS=Cucumis sativus OX=3659 GN=Csa_6G344240 PE=4 SV=1	[more]
A0A5A7UXE1	7.21e-21	76.27	Basic blue protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Cp4.1LG13g04400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02850.1	4.0e-13	55.74	plantacyanin	[more]
AT3G60280.1	2.6e-04	42.37	uclacyanin 3	[more]
AT5G26330.1	2.6e-04	42.11	Cupredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008972	Cupredoxin	GENE3D	2.60.40.420		coord: 93..129 e-value: 4.0E-6 score: 29.0
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 93..123
None	No IPR available	PANTHER	PTHR33021:SF379	BLUE PROTEIN, PUTATIVE-RELATED	coord: 71..123
IPR039391	Phytocyanin	PANTHER	PTHR33021	BLUE COPPER PROTEIN	coord: 71..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG13g04400.1	Cp4.1LG13g04400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048653	anther development
biological_process	GO:0022900	electron transport chain
biological_process	GO:0009856	pollination
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0031012	extracellular matrix
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0009055	electron transfer activity