Cp4.1LG13g04090 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG13g04090
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	dof zinc finger protein DOF1.2-like
Location	Cp4.1LG13: 6290209 .. 6290928 (-)
RNA-Seq Expression	Cp4.1LG13g04090
Synteny	Cp4.1LG13g04090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCGACCACCACCAGCTCCCTCCTCCACCTCCGCCGCCGTTCGCCTCCCATCTCGAGCGGAAATGGAAGCCTCATCTCGAAACAGCTCCAAATTGCCCTCGTTGCGCCTCCGCCAATACCAAATTCTGTTATTACAACAACTACAGCCTCTCCCAACCTAGATACTTTTGTAAATCCTGTCGACGCTATTGGACCAAAGGCGGTTCCCTCCGTAACGTCCCTGTCGGCGGTGGCTGTCGTAAGAGTCGTCGTACCAGGTCCTCACGATCCTCAACTGTCTCACGTTCTACCAACCCCAACACTTGTACACAAATCACTGAATCCTCCTCTAATGGACCCGATATCGATCTTGCTGCCGTTTTCGCTAGATATTTGAACACCGCCCCACCAAGTACTGAGGCACACGCGTTGACCAGCTCGCCCGAATCCGTTGACCCTTTAGAGAATTGTGAAATCTTGTTTGAAGGGCTGTCGGATTTGTTAATTGAGGAGGAAAATCAAGCCCAAGAACAAAAACAGGGGATTATGGGAAATTACGAAAATACTCCGTTTGGGTTACACGCGGAATTGGGCGTTGAGGAAGAAGTATGGGCGTCGCAACAAATCCAAGAATTGGACTCTTTTTCTTGCAATTATAATGCGAATCAATTCTGTGAAGTGGGAGATAATTGGAGCTCATTCGACTTTGCAGCCGTAAATAATGTCGAATATTTCTAA

mRNA sequence

ATGTCCGACCACCACCAGCTCCCTCCTCCACCTCCGCCGCCGTTCGCCTCCCATCTCGAGCGGAAATGGAAGCCTCATCTCGAAACAGCTCCAAATTGCCCTCGTTGCGCCTCCGCCAATACCAAATTCTGTTATTACAACAACTACAGCCTCTCCCAACCTAGATACTTTTGTAAATCCTGTCGACGCTATTGGACCAAAGGCGGTTCCCTCCGTAACGTCCCTGTCGGCGGTGGCTGTCGTAAGAGTCGTCGTACCAGGTCCTCACGATCCTCAACTGTCTCACGTTCTACCAACCCCAACACTTGTACACAAATCACTGAATCCTCCTCTAATGGACCCGATATCGATCTTGCTGCCGTTTTCGCTAGATATTTGAACACCGCCCCACCAAGTACTGAGGCACACGCGTTGACCAGCTCGCCCGAATCCGTTGACCCTTTAGAGAATTGTGAAATCTTGTTTGAAGGGCTGTCGGATTTGTTAATTGAGGAGGAAAATCAAGCCCAAGAACAAAAACAGGGGATTATGGGAAATTACGAAAATACTCCGTTTGGGTTACACGCGGAATTGGGCGTTGAGGAAGAAGTATGGGCGTCGCAACAAATCCAAGAATTGGACTCTTTTTCTTGCAATTATAATGCGAATCAATTCTGTGAAGTGGGAGATAATTGGAGCTCATTCGACTTTGCAGCCGTAAATAATGTCGAATATTTCTAA

Coding sequence (CDS)

ATGTCCGACCACCACCAGCTCCCTCCTCCACCTCCGCCGCCGTTCGCCTCCCATCTCGAGCGGAAATGGAAGCCTCATCTCGAAACAGCTCCAAATTGCCCTCGTTGCGCCTCCGCCAATACCAAATTCTGTTATTACAACAACTACAGCCTCTCCCAACCTAGATACTTTTGTAAATCCTGTCGACGCTATTGGACCAAAGGCGGTTCCCTCCGTAACGTCCCTGTCGGCGGTGGCTGTCGTAAGAGTCGTCGTACCAGGTCCTCACGATCCTCAACTGTCTCACGTTCTACCAACCCCAACACTTGTACACAAATCACTGAATCCTCCTCTAATGGACCCGATATCGATCTTGCTGCCGTTTTCGCTAGATATTTGAACACCGCCCCACCAAGTACTGAGGCACACGCGTTGACCAGCTCGCCCGAATCCGTTGACCCTTTAGAGAATTGTGAAATCTTGTTTGAAGGGCTGTCGGATTTGTTAATTGAGGAGGAAAATCAAGCCCAAGAACAAAAACAGGGGATTATGGGAAATTACGAAAATACTCCGTTTGGGTTACACGCGGAATTGGGCGTTGAGGAAGAAGTATGGGCGTCGCAACAAATCCAAGAATTGGACTCTTTTTCTTGCAATTATAATGCGAATCAATTCTGTGAAGTGGGAGATAATTGGAGCTCATTCGACTTTGCAGCCGTAAATAATGTCGAATATTTCTAA

Protein sequence

MSDHHQLPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPNTCTQITESSSNGPDIDLAAVFARYLNTAPPSTEAHALTSSPESVDPLENCEILFEGLSDLLIEEENQAQEQKQGIMGNYENTPFGLHAELGVEEEVWASQQIQELDSFSCNYNANQFCEVGDNWSSFDFAAVNNVEYF

Homology

[Close]

BLAST of Cp4.1LG13g04090 vs. ExPASy Swiss-Prot
Match: P68349 (Dof zinc finger protein DOF1.2 OS=Arabidopsis thaliana OX=3702 GN=DOF1.2 PE=2 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.2e-33
Identity = 102/252 (40.48%), Postives = 131/252 (51.98%), Query Frame = 0


Query: 5   HQLPPPPPPPFASHLERKWKPHLE----TAPNCPRCASANTKFCYYNNYSLSQPRYFCKS 64
           HQ P P        +  KWK   E    TAP CPRCAS+NTKFCYYNNYSLSQPRYFCK 
Sbjct: 13  HQFPLP-----EMEIPEKWKLSYEQEAITAPACPRCASSNTKFCYYNNYSLSQPRYFCKG 72

Query: 65  CRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTN-PNTCTQIT---ESSSNGPDI 124
           CRRYWTKGGSLRN+PVGGGCRK  R+R +      R+ N P+         +SS  G DI
Sbjct: 73  CRRYWTKGGSLRNIPVGGGCRKRSRSRQNSHKRFGRNENRPDGLINQDDGFQSSPPGSDI 132

Query: 125 DLAAVFARYLNTAPPSTEAHALTSSPESVDPLENCEILFEGLSDLLIEEEN--------- 184
           DLAAVFA+Y+    PS+  +   S  +S  P+       E LS  + +E +         
Sbjct: 133 DLAAVFAQYVTDRSPSSTDNTTGSDQDS--PITTTTHALESLSWDICQETDVDLGFYGEF 192

Query: 185 ----QAQEQKQGIMGNYENTPFGLHAELGVEEEVWASQQIQELDSFSCNYNANQ------ 230
               Q  ++ Q + G +         E+   + +   ++IQE+   S +   +Q      
Sbjct: 193 NNLTQKTKEDQEVFGQFLQED---REEIFEFQGLLDDKEIQEILECSFSEEPDQLVSQGS 252

[Close]

BLAST of Cp4.1LG13g04090 vs. ExPASy Swiss-Prot
Match: Q9SVC5 (Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana OX=3702 GN=DOF3.5 PE=3 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 3.0e-32
Identity = 71/116 (61.21%), Postives = 82/116 (70.69%), Query Frame = 0


Query: 23  WKP----HLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGG 82
           W+P    + E  P+CPRC S+NTKFCYYNNYSL+QPRYFCK CRRYWTKGGSLRNVPVGG
Sbjct: 13  WRPNANANAEITPSCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 72

Query: 83  GCRKSRRTRSSRSSTVSRSTNPNTCTQITESSSN----GPDIDLAAVFARYLNTAP 131
           GCRKSRR +SS  +        NT T +T +S N     P IDLA V+A +LN  P
Sbjct: 73  GCRKSRRPKSSSGN--------NTKTSLTANSGNPGGGSPSIDLALVYANFLNPKP 120

[Close]

BLAST of Cp4.1LG13g04090 vs. ExPASy Swiss-Prot
Match: Q84JQ8 (Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana OX=3702 GN=DOF1.8 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.5e-26
Identity = 57/88 (64.77%), Postives = 70/88 (79.55%), Query Frame = 0


Query: 12  PPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSL 71
           PP  A+ +ERK +P  + A NCPRC S NTKFCYYNNYSL+QPRYFCK CRRYWT GGSL
Sbjct: 30  PPSPATPVERKARPEKDQALNCPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYWTAGGSL 89

Query: 72  RNVPVGGGCRKSRRTRSSRSSTVSRSTN 100
           RN+PVGGG RK++R+ S+ SS+   S++
Sbjct: 90  RNIPVGGGVRKNKRSSSNSSSSSPSSSS 117

[Close]

BLAST of Cp4.1LG13g04090 vs. ExPASy Swiss-Prot
Match: Q8LAP8 (Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana OX=3702 GN=DOF4.6 PE=2 SV=2)

HSP 1 Score: 118.2 bits (295), Expect = 1.2e-25
Identity = 62/105 (59.05%), Postives = 74/105 (70.48%), Query Frame = 0


Query: 7   LPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWT 66
           L P  PP      ERK +P  + A NCPRC S NTKFCYYNNYSL+QPRYFCK CRRYWT
Sbjct: 31  LQPQQPPSVGG--ERKARPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWT 90

Query: 67  KGGSLRNVPVGGGCRKSRRTRSSR---SSTVSRSTNPNTCTQITE 109
           +GGSLRN+PVGGG RK++R+ SS    S+  S ST P T   +++
Sbjct: 91  EGGSLRNIPVGGGSRKNKRSHSSSSDISNNHSDSTQPATKKHLSD 133

[Close]

BLAST of Cp4.1LG13g04090 vs. ExPASy Swiss-Prot
Match: Q9SXG8 (Dof zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF1 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 6.2e-25
Identity = 63/106 (59.43%), Postives = 73/106 (68.87%), Query Frame = 0


Query: 8   PPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTK 67
           PP      A   ER+ +P  E A NCPRC S NTKFCYYNNYSL QPRYFCK+CRRYWT+
Sbjct: 55  PPVAGGAGAGSTERRARPQKEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTE 114

Query: 68  GGSLRNVPVGGGCRKSRRTRSSRSST--VSRSTNPNTCTQITESSS 112
           GGSLRNVPVGGG RK++R+ SS +S    S ST  +  T  + S S
Sbjct: 115 GGSLRNVPVGGGSRKNKRSSSSAASASPASASTANSVVTSASMSMS 160

[Close]

BLAST of Cp4.1LG13g04090 vs. NCBI nr
Match: XP_023522776.1 (dof zinc finger protein DOF1.2-like [Cucurbita pepo subsp. pepo] >XP_023551553.1 dof zinc finger protein DOF1.2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 491 bits (1263), Expect = 4.58e-175
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0


Query: 1   MSDHHQLPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKS 60
           MSDHHQLPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKS
Sbjct: 6   MSDHHQLPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKS 65

Query: 61  CRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPNTCTQITESSSNGPDIDLAA 120
           CRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPNTCTQITESSSNGPDIDLAA
Sbjct: 66  CRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPNTCTQITESSSNGPDIDLAA 125

Query: 121 VFARYLNTAPPSTEAHALTSSPESVDPLENCEILFEGLSDLLIEEENQAQEQKQGIMGNY 180
           VFARYLNTAPPSTEAHALTSSPESVDPLENCEILFEGLSDLLIEEENQAQEQKQGIMGNY
Sbjct: 126 VFARYLNTAPPSTEAHALTSSPESVDPLENCEILFEGLSDLLIEEENQAQEQKQGIMGNY 185

Query: 181 ENTPFGLHAELGVEEEVWASQQIQELDSFSCNYNANQFCEVGDNWSSFDFAAVNNVEYF 239
           ENTPFGLHAELGVEEEVWASQQIQELDSFSCNYNANQFCEVGDNWSSFDFAAVNNVEYF
Sbjct: 186 ENTPFGLHAELGVEEEVWASQQIQELDSFSCNYNANQFCEVGDNWSSFDFAAVNNVEYF 244

[Close]

BLAST of Cp4.1LG13g04090 vs. NCBI nr
Match: KAG6578910.1 (Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 480 bits (1236), Expect = 4.99e-171
Identity = 234/239 (97.91%), Postives = 236/239 (98.74%), Query Frame = 0


Query: 1   MSDHHQLPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKS 60
           MSDHHQLPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKS
Sbjct: 1   MSDHHQLPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKS 60

Query: 61  CRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPNTCTQITESSSNGPDIDLAA 120
           CRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNP+T TQITESSSNGPDIDLAA
Sbjct: 61  CRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPDTSTQITESSSNGPDIDLAA 120

Query: 121 VFARYLNTAPPSTEAHALTSSPESVDPLENCEILFEGLSDLLIEEENQAQEQKQGIMGNY 180
           VFARYLNTAPPSTEAHALTSSPESVDPLENCEI FEGLSDLLI+EENQ QEQKQGIMGNY
Sbjct: 121 VFARYLNTAPPSTEAHALTSSPESVDPLENCEIFFEGLSDLLIDEENQPQEQKQGIMGNY 180

Query: 181 ENTPFGLHAELGVEEEVWASQQIQELDSFSCNYNANQFCEVGDNWSSFDFAAVNNVEYF 239
           ENTPFGLHAELGVEEEVWASQQIQELDSFSCNYNANQFCEVGDNWSSFDFAAVNNVEYF
Sbjct: 181 ENTPFGLHAELGVEEEVWASQQIQELDSFSCNYNANQFCEVGDNWSSFDFAAVNNVEYF 239

[Close]

BLAST of Cp4.1LG13g04090 vs. NCBI nr
Match: XP_022939534.1 (dof zinc finger protein DOF1.2-like [Cucurbita moschata])

HSP 1 Score: 479 bits (1234), Expect = 1.21e-170
Identity = 234/239 (97.91%), Postives = 235/239 (98.33%), Query Frame = 0


Query: 1   MSDHHQLPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKS 60
           MSDHHQLPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKS
Sbjct: 6   MSDHHQLPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKS 65

Query: 61  CRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPNTCTQITESSSNGPDIDLAA 120
           CRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNP+T TQITESSSNGPDIDLAA
Sbjct: 66  CRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPDTSTQITESSSNGPDIDLAA 125

Query: 121 VFARYLNTAPPSTEAHALTSSPESVDPLENCEILFEGLSDLLIEEENQAQEQKQGIMGNY 180
           VFARYLNTAPPSTEAHALTSSPESVDPLENCEI FEGLSDLL EEENQ QEQKQGIMGNY
Sbjct: 126 VFARYLNTAPPSTEAHALTSSPESVDPLENCEIFFEGLSDLLTEEENQPQEQKQGIMGNY 185

Query: 181 ENTPFGLHAELGVEEEVWASQQIQELDSFSCNYNANQFCEVGDNWSSFDFAAVNNVEYF 239
           ENTPFGLHAELGVEEEVWASQQIQELDSFSCNYNANQFCEVGDNWSSFDFAAVNNVEYF
Sbjct: 186 ENTPFGLHAELGVEEEVWASQQIQELDSFSCNYNANQFCEVGDNWSSFDFAAVNNVEYF 244

[Close]

BLAST of Cp4.1LG13g04090 vs. NCBI nr
Match: KAG7016431.1 (Dof zinc finger protein DOF1.2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 479 bits (1232), Expect = 2.03e-170
Identity = 233/239 (97.49%), Postives = 236/239 (98.74%), Query Frame = 0


Query: 1   MSDHHQLPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKS 60
           MSDHHQLPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKS
Sbjct: 1   MSDHHQLPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKS 60

Query: 61  CRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPNTCTQITESSSNGPDIDLAA 120
           CRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNP+T TQITESSSNGPDIDLAA
Sbjct: 61  CRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPDTSTQITESSSNGPDIDLAA 120

Query: 121 VFARYLNTAPPSTEAHALTSSPESVDPLENCEILFEGLSDLLIEEENQAQEQKQGIMGNY 180
           VFARYLNTAPPSTEAHALTSSPESVDPLENCEI FEGLSDLLI+EENQ QEQKQGI+GNY
Sbjct: 121 VFARYLNTAPPSTEAHALTSSPESVDPLENCEIFFEGLSDLLIDEENQPQEQKQGIIGNY 180

Query: 181 ENTPFGLHAELGVEEEVWASQQIQELDSFSCNYNANQFCEVGDNWSSFDFAAVNNVEYF 239
           ENTPFGLHAELGVEEEVWASQQIQELDSFSCNYNANQFCEVGDNWSSFDFAAVNNVEYF
Sbjct: 181 ENTPFGLHAELGVEEEVWASQQIQELDSFSCNYNANQFCEVGDNWSSFDFAAVNNVEYF 239

[Close]

BLAST of Cp4.1LG13g04090 vs. NCBI nr
Match: XP_022993920.1 (dof zinc finger protein DOF1.2-like [Cucurbita maxima])

HSP 1 Score: 469 bits (1207), Expect = 1.64e-166
Identity = 230/240 (95.83%), Postives = 233/240 (97.08%), Query Frame = 0


Query: 1   MSDHHQLP-PPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCK 60
           MSDHHQLP PPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCK
Sbjct: 6   MSDHHQLPQPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCK 65

Query: 61  SCRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPNTCTQITESSSNGPDIDLA 120
           SCRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNP+T TQITESSSNGPDIDLA
Sbjct: 66  SCRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPDTSTQITESSSNGPDIDLA 125

Query: 121 AVFARYLNTAPPSTEAHALTSSPESVDPLENCEILFEGLSDLLIEEENQAQEQKQGIMGN 180
           AVFARYLNT PPSTE H LTSSPESVDPLENCEI FEGL+DLLIEEENQ QEQKQGIMGN
Sbjct: 126 AVFARYLNTTPPSTEHHTLTSSPESVDPLENCEIFFEGLTDLLIEEENQPQEQKQGIMGN 185

Query: 181 YENTPFGLHAELGVEEEVWASQQIQELDSFSCNYNANQFCEVGDNWSSFDFAAVNNVEYF 239
           YENTPFGLHAELGVEEE+WASQQIQELDSFSCNYNANQFCEVGDNWSSFDFAAVNNVEYF
Sbjct: 186 YENTPFGLHAELGVEEELWASQQIQELDSFSCNYNANQFCEVGDNWSSFDFAAVNNVEYF 245

[Close]

BLAST of Cp4.1LG13g04090 vs. ExPASy TrEMBL
Match: A0A6J1FHI1 (dof zinc finger protein DOF1.2-like OS=Cucurbita moschata OX=3662 GN=LOC111445412 PE=4 SV=1)

HSP 1 Score: 479 bits (1234), Expect = 5.85e-171
Identity = 234/239 (97.91%), Postives = 235/239 (98.33%), Query Frame = 0


Query: 1   MSDHHQLPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKS 60
           MSDHHQLPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKS
Sbjct: 6   MSDHHQLPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKS 65

Query: 61  CRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPNTCTQITESSSNGPDIDLAA 120
           CRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNP+T TQITESSSNGPDIDLAA
Sbjct: 66  CRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPDTSTQITESSSNGPDIDLAA 125

Query: 121 VFARYLNTAPPSTEAHALTSSPESVDPLENCEILFEGLSDLLIEEENQAQEQKQGIMGNY 180
           VFARYLNTAPPSTEAHALTSSPESVDPLENCEI FEGLSDLL EEENQ QEQKQGIMGNY
Sbjct: 126 VFARYLNTAPPSTEAHALTSSPESVDPLENCEIFFEGLSDLLTEEENQPQEQKQGIMGNY 185

Query: 181 ENTPFGLHAELGVEEEVWASQQIQELDSFSCNYNANQFCEVGDNWSSFDFAAVNNVEYF 239
           ENTPFGLHAELGVEEEVWASQQIQELDSFSCNYNANQFCEVGDNWSSFDFAAVNNVEYF
Sbjct: 186 ENTPFGLHAELGVEEEVWASQQIQELDSFSCNYNANQFCEVGDNWSSFDFAAVNNVEYF 244

[Close]

BLAST of Cp4.1LG13g04090 vs. ExPASy TrEMBL
Match: A0A6J1JZV1 (dof zinc finger protein DOF1.2-like OS=Cucurbita maxima OX=3661 GN=LOC111489774 PE=4 SV=1)

HSP 1 Score: 469 bits (1207), Expect = 7.94e-167
Identity = 230/240 (95.83%), Postives = 233/240 (97.08%), Query Frame = 0


Query: 1   MSDHHQLP-PPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCK 60
           MSDHHQLP PPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCK
Sbjct: 6   MSDHHQLPQPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCK 65

Query: 61  SCRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPNTCTQITESSSNGPDIDLA 120
           SCRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNP+T TQITESSSNGPDIDLA
Sbjct: 66  SCRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPDTSTQITESSSNGPDIDLA 125

Query: 121 AVFARYLNTAPPSTEAHALTSSPESVDPLENCEILFEGLSDLLIEEENQAQEQKQGIMGN 180
           AVFARYLNT PPSTE H LTSSPESVDPLENCEI FEGL+DLLIEEENQ QEQKQGIMGN
Sbjct: 126 AVFARYLNTTPPSTEHHTLTSSPESVDPLENCEIFFEGLTDLLIEEENQPQEQKQGIMGN 185

Query: 181 YENTPFGLHAELGVEEEVWASQQIQELDSFSCNYNANQFCEVGDNWSSFDFAAVNNVEYF 239
           YENTPFGLHAELGVEEE+WASQQIQELDSFSCNYNANQFCEVGDNWSSFDFAAVNNVEYF
Sbjct: 186 YENTPFGLHAELGVEEELWASQQIQELDSFSCNYNANQFCEVGDNWSSFDFAAVNNVEYF 245

[Close]

BLAST of Cp4.1LG13g04090 vs. ExPASy TrEMBL
Match: A0A5A7USP7 (Dof zinc finger protein DOF3.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G00270 PE=4 SV=1)

HSP 1 Score: 370 bits (951), Expect = 7.53e-128
Identity = 189/249 (75.90%), Postives = 207/249 (83.13%), Query Frame = 0


Query: 1   MSDHHQLPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKS 60
           MSDHHQLPPPPPP F SHLERKWKPHLETAPNCPRCAS NTKFCYYNNYSLSQPRYFCKS
Sbjct: 1   MSDHHQLPPPPPP-FPSHLERKWKPHLETAPNCPRCASTNTKFCYYNNYSLSQPRYFCKS 60

Query: 61  CRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPNTCTQITESSSNGPDIDLAA 120
           CRRYWTKGGSLRNVPVGGGCRKSRR +SS+SS +SR + P+  +Q T+SSS+  DIDLAA
Sbjct: 61  CRRYWTKGGSLRNVPVGGGCRKSRRAKSSKSSPISRPSKPDLSSQTTDSSSSASDIDLAA 120

Query: 121 VFARYLNTAPPSTEAHALTSSPESVDPLENCEILFEGLSDLLIEEENQAQEQKQGIMGNY 180
           VFAR+LN+ P      ALTSSPESVDPLE  EI  EGLSDLL+E+ENQ +E KQGI GN+
Sbjct: 121 VFARFLNSEP-----QALTSSPESVDPLEISEIFLEGLSDLLLEDENQREEGKQGIPGNH 180

Query: 181 ENTPFGLHAELGVEEEVWASQ----QIQELDSFSCNYNAN------QFCEVGDNWSSFDF 239
           EN  FGL  ELG++EEVWASQ    Q+QELDSFSCNY AN      Q C+VGDNWSSFDF
Sbjct: 181 ENVSFGLETELGIDEEVWASQEMQEQVQELDSFSCNYYANDLRVSDQLCQVGDNWSSFDF 240

[Close]

BLAST of Cp4.1LG13g04090 vs. ExPASy TrEMBL
Match: A0A0A0KGG2 (Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G338090 PE=4 SV=1)

HSP 1 Score: 364 bits (934), Expect = 3.48e-125
Identity = 183/249 (73.49%), Postives = 206/249 (82.73%), Query Frame = 0


Query: 1   MSDHHQLPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKS 60
           MSDH QLPPPPPP F SHL+RKWKPHLE APNCPRCAS NTKFCYYNNYSLSQPRYFCKS
Sbjct: 6   MSDHQQLPPPPPP-FPSHLQRKWKPHLEAAPNCPRCASTNTKFCYYNNYSLSQPRYFCKS 65

Query: 61  CRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPNTCTQITESSSNGPDIDLAA 120
           CRRYWTKGGSLRNVPVGGGCRKSRR +SS+SS +SR + P+  +Q T+SSS+  DIDLAA
Sbjct: 66  CRRYWTKGGSLRNVPVGGGCRKSRRAKSSKSSAISRPSKPDLSSQTTDSSSSASDIDLAA 125

Query: 121 VFARYLNTAPPSTEAHALTSSPESVDPLENCEILFEGLSDLLIEEENQAQEQKQGIMGNY 180
           VFAR+LN+ P       LTSSPESVDPLE  EI  EGLSD+L+++ENQ +E+KQGI G+Y
Sbjct: 126 VFARFLNSEP-----QTLTSSPESVDPLEISEIFLEGLSDMLLDDENQREEEKQGIPGSY 185

Query: 181 ENTPFGLHAELGVEEEVWAS----QQIQELDSFSCNYNAN------QFCEVGDNWSSFDF 239
           EN  FGL  ELG++EEVWAS    +Q+QELDSFSCNY AN      QFC+VGDNWSSFDF
Sbjct: 186 ENVSFGLETELGIDEEVWASPEMQEQVQELDSFSCNYYANDLRVSDQFCQVGDNWSSFDF 245

[Close]

BLAST of Cp4.1LG13g04090 vs. ExPASy TrEMBL
Match: A0A6J1JQE1 (dof zinc finger protein DOF1.2-like OS=Cucurbita maxima OX=3661 GN=LOC111486881 PE=4 SV=1)

HSP 1 Score: 275 bits (704), Expect = 1.16e-90
Identity = 155/227 (68.28%), Postives = 172/227 (75.77%), Query Frame = 0


Query: 1   MSDHHQ---LPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYF 60
           MSDHHQ   LPP  PPPFA+HLERKWKPHLE APNCPRCASANTKFCYYNNYSLSQPRYF
Sbjct: 1   MSDHHQISHLPPSTPPPFAAHLERKWKPHLEKAPNCPRCASANTKFCYYNNYSLSQPRYF 60

Query: 61  CKSCRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPNTC-TQITESSSNGPDI 120
           CKSCRRYWTKGGSLRNVPVGGGCRK+RR++SS SST+     PN   T+ITE SSNG DI
Sbjct: 61  CKSCRRYWTKGGSLRNVPVGGGCRKTRRSKSSTSSTIL----PNVISTKITEPSSNGSDI 120

Query: 121 DLAAVFARYLNTAPPSTEAHALTSSPESVDPLENC-----EILFEGLSDLLIEEENQAQE 180
           DLAAVFA++LNT PPST+    TSSPES DP +N      EI FE LSDL     NQ ++
Sbjct: 121 DLAAVFAKFLNT-PPSTKPRVSTSSPESTDPSDNLTAKNPEIFFEELSDLF----NQPED 180

Query: 181 QKQGIMGNYENTPFGLHAELGVEEEVWASQ---QIQELDSFSCNYNA 215
           +   I  NYEN PFGL  EL ++E +W SQ   Q+QE  SF CNYNA
Sbjct: 181 R---ITKNYENFPFGLQPELTIDE-LWPSQPIEQLQEWKSFLCNYNA 214

[Close]

BLAST of Cp4.1LG13g04090 vs. TAIR 10
Match: AT1G21340.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 144.8 bits (364), Expect = 8.8e-35
Identity = 102/252 (40.48%), Postives = 131/252 (51.98%), Query Frame = 0


Query: 5   HQLPPPPPPPFASHLERKWKPHLE----TAPNCPRCASANTKFCYYNNYSLSQPRYFCKS 64
           HQ P P        +  KWK   E    TAP CPRCAS+NTKFCYYNNYSLSQPRYFCK 
Sbjct: 13  HQFPLP-----EMEIPEKWKLSYEQEAITAPACPRCASSNTKFCYYNNYSLSQPRYFCKG 72

Query: 65  CRRYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTN-PNTCTQIT---ESSSNGPDI 124
           CRRYWTKGGSLRN+PVGGGCRK  R+R +      R+ N P+         +SS  G DI
Sbjct: 73  CRRYWTKGGSLRNIPVGGGCRKRSRSRQNSHKRFGRNENRPDGLINQDDGFQSSPPGSDI 132

Query: 125 DLAAVFARYLNTAPPSTEAHALTSSPESVDPLENCEILFEGLSDLLIEEEN--------- 184
           DLAAVFA+Y+    PS+  +   S  +S  P+       E LS  + +E +         
Sbjct: 133 DLAAVFAQYVTDRSPSSTDNTTGSDQDS--PITTTTHALESLSWDICQETDVDLGFYGEF 192

Query: 185 ----QAQEQKQGIMGNYENTPFGLHAELGVEEEVWASQQIQELDSFSCNYNANQ------ 230
               Q  ++ Q + G +         E+   + +   ++IQE+   S +   +Q      
Sbjct: 193 NNLTQKTKEDQEVFGQFLQED---REEIFEFQGLLDDKEIQEILECSFSEEPDQLVSQGS 252

[Close]

BLAST of Cp4.1LG13g04090 vs. TAIR 10
Match: AT3G52440.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 140.2 bits (352), Expect = 2.2e-33
Identity = 71/116 (61.21%), Postives = 82/116 (70.69%), Query Frame = 0


Query: 23  WKP----HLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSLRNVPVGG 82
           W+P    + E  P+CPRC S+NTKFCYYNNYSL+QPRYFCK CRRYWTKGGSLRNVPVGG
Sbjct: 13  WRPNANANAEITPSCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGG 72

Query: 83  GCRKSRRTRSSRSSTVSRSTNPNTCTQITESSSN----GPDIDLAAVFARYLNTAP 131
           GCRKSRR +SS  +        NT T +T +S N     P IDLA V+A +LN  P
Sbjct: 73  GCRKSRRPKSSSGN--------NTKTSLTANSGNPGGGSPSIDLALVYANFLNPKP 120

[Close]

BLAST of Cp4.1LG13g04090 vs. TAIR 10
Match: AT1G64620.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 121.3 bits (303), Expect = 1.0e-27
Identity = 57/88 (64.77%), Postives = 70/88 (79.55%), Query Frame = 0


Query: 12  PPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWTKGGSL 71
           PP  A+ +ERK +P  + A NCPRC S NTKFCYYNNYSL+QPRYFCK CRRYWT GGSL
Sbjct: 30  PPSPATPVERKARPEKDQALNCPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYWTAGGSL 89

Query: 72  RNVPVGGGCRKSRRTRSSRSSTVSRSTN 100
           RN+PVGGG RK++R+ S+ SS+   S++
Sbjct: 90  RNIPVGGGVRKNKRSSSNSSSSSPSSSS 117

[Close]

BLAST of Cp4.1LG13g04090 vs. TAIR 10
Match: AT4G24060.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 118.2 bits (295), Expect = 8.8e-27
Identity = 62/105 (59.05%), Postives = 74/105 (70.48%), Query Frame = 0


Query: 7   LPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCRRYWT 66
           L P  PP      ERK +P  + A NCPRC S NTKFCYYNNYSL+QPRYFCK CRRYWT
Sbjct: 31  LQPQQPPSVGG--ERKARPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWT 90

Query: 67  KGGSLRNVPVGGGCRKSRRTRSSR---SSTVSRSTNPNTCTQITE 109
           +GGSLRN+PVGGG RK++R+ SS    S+  S ST P T   +++
Sbjct: 91  EGGSLRNIPVGGGSRKNKRSHSSSSDISNNHSDSTQPATKKHLSD 133

[Close]

BLAST of Cp4.1LG13g04090 vs. TAIR 10
Match: AT5G60200.1 (TARGET OF MONOPTEROS 6 )

HSP 1 Score: 115.5 bits (288), Expect = 5.7e-26
Identity = 69/139 (49.64%), Postives = 87/139 (62.59%), Query Frame = 0


Query: 3   DHHQLPPPPPPPFASHLERKWKPHLETAPNCPRCASANTKFCYYNNYSLSQPRYFCKSCR 62
           D+ Q  P P    A+ + R   P  E A  CPRC S NTKFCYYNNYSL+QPRYFCKSCR
Sbjct: 33  DNDQKKPSP----ATAVTRPQPP--ELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCR 92

Query: 63  RYWTKGGSLRNVPVGGGCRKSRRTRSSRSSTVSRSTNPNTCTQITESS------SNGPDI 122
           RYWTKGG+LRN+PVGGGCRK++R+ SS + ++  +  P +      S+      SN   I
Sbjct: 93  RYWTKGGTLRNIPVGGGCRKNKRSTSSAARSLRTTPEPASHDGKVFSAAGFNGYSNNEHI 152

Query: 123 DLAAVFARYLNTAPPSTEA 136
           DL+  FA  LN   P + +
Sbjct: 153 DLSLAFA-LLNKQHPGSSS 164

The following BLAST results are available for this feature:

BLAST of Cp4.1LG13g04090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P68349	1.2e-33	40.48	Dof zinc finger protein DOF1.2 OS=Arabidopsis thaliana OX=3702 GN=DOF1.2 PE=2 SV...	[more]
Q9SVC5	3.0e-32	61.21	Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana OX=3702 GN=DOF3.5 PE=3 SV...	[more]
Q84JQ8	1.5e-26	64.77	Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana OX=3702 GN=DOF1.8 PE=2 SV...	[more]
Q8LAP8	1.2e-25	59.05	Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana OX=3702 GN=DOF4.6 PE=2 SV...	[more]
Q9SXG8	6.2e-25	59.43	Dof zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF1 PE=2 ...	[more]

BLAST of Cp4.1LG13g04090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023522776.1	4.58e-175	100.00	dof zinc finger protein DOF1.2-like [Cucurbita pepo subsp. pepo] >XP_023551553.1...	[more]
KAG6578910.1	4.99e-171	97.91	Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022939534.1	1.21e-170	97.91	dof zinc finger protein DOF1.2-like [Cucurbita moschata]	[more]
KAG7016431.1	2.03e-170	97.49	Dof zinc finger protein DOF1.2, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]
XP_022993920.1	1.64e-166	95.83	dof zinc finger protein DOF1.2-like [Cucurbita maxima]	[more]

BLAST of Cp4.1LG13g04090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FHI1	5.85e-171	97.91	dof zinc finger protein DOF1.2-like OS=Cucurbita moschata OX=3662 GN=LOC11144541...	[more]
A0A6J1JZV1	7.94e-167	95.83	dof zinc finger protein DOF1.2-like OS=Cucurbita maxima OX=3661 GN=LOC111489774 ...	[more]
A0A5A7USP7	7.53e-128	75.90	Dof zinc finger protein DOF3.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A0A0KGG2	3.48e-125	73.49	Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G338090 PE...	[more]
A0A6J1JQE1	1.16e-90	68.28	dof zinc finger protein DOF1.2-like OS=Cucurbita maxima OX=3661 GN=LOC111486881 ...	[more]

BLAST of Cp4.1LG13g04090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G21340.1	8.8e-35	40.48	Dof-type zinc finger DNA-binding family protein	[more]
AT3G52440.1	2.2e-33	61.21	Dof-type zinc finger DNA-binding family protein	[more]
AT1G64620.1	1.0e-27	64.77	Dof-type zinc finger DNA-binding family protein	[more]
AT4G24060.1	8.8e-27	59.05	Dof-type zinc finger DNA-binding family protein	[more]
AT5G60200.1	5.7e-26	49.64	TARGET OF MONOPTEROS 6	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 31..85 e-value: 5.1E-32 score: 109.8
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 33..69
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 31..85 score: 28.63031
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..110
None	No IPR available	PANTHER	PTHR31992	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	coord: 10..199
None	No IPR available	PANTHER	PTHR31992:SF198	DOF ZINC FINGER PROTEIN DOF1.2	coord: 10..199

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG13g04090.1	Cp4.1LG13g04090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding